Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03602.t1 | RHN81286.1 | 87 | 115 | 12 | 1 | 45 | 159 | 414 | 525 | 3.90E-46 | 195.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03602.t1 | P53681 | 65.5 | 87 | 25 | 3 | 269 | 355 | 202 | 283 | 3.7e-21 | 104.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03602.t1 | A0A072VNB4 | 87.0 | 115 | 12 | 1 | 45 | 159 | 454 | 565 | 2.8e-46 | 195.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03602.t1 | MTR_1g090723 | 71.233 | 146 | 23 | 2 | 45 | 190 | 277 | 403 | 4.42e-60 | 200 |
| MS.gene03602.t1 | MTR_1g090723 | 71.233 | 146 | 23 | 2 | 45 | 190 | 317 | 443 | 1.32e-59 | 200 |
| MS.gene03602.t1 | MTR_1g090723 | 86.207 | 116 | 13 | 1 | 45 | 160 | 414 | 526 | 1.09e-58 | 200 |
| MS.gene03602.t1 | MTR_1g090723 | 86.207 | 116 | 13 | 1 | 45 | 160 | 455 | 567 | 1.85e-58 | 200 |
| MS.gene03602.t1 | MTR_1g090723 | 86.207 | 116 | 13 | 1 | 45 | 160 | 454 | 566 | 1.96e-58 | 200 |
| MS.gene03602.t1 | MTR_7g071990 | 89.474 | 95 | 9 | 1 | 173 | 267 | 433 | 526 | 1.31e-46 | 170 |
| MS.gene03602.t1 | MTR_7g071990 | 89.474 | 95 | 9 | 1 | 173 | 267 | 433 | 526 | 1.35e-46 | 170 |
| MS.gene03602.t1 | MTR_0036s0150 | 69.697 | 99 | 29 | 1 | 63 | 160 | 382 | 480 | 5.90e-36 | 137 |
| MS.gene03602.t1 | MTR_4g086660 | 71.429 | 84 | 19 | 3 | 269 | 352 | 191 | 269 | 5.32e-26 | 109 |
| MS.gene03602.t1 | MTR_8g079790 | 68.000 | 75 | 21 | 1 | 281 | 352 | 186 | 260 | 9.70e-23 | 100 |
| MS.gene03602.t1 | MTR_5g017830 | 79.245 | 53 | 11 | 0 | 300 | 352 | 214 | 266 | 6.64e-21 | 94.7 |
| MS.gene03602.t1 | MTR_3g092230 | 77.358 | 53 | 12 | 0 | 300 | 352 | 218 | 270 | 6.90e-21 | 94.7 |
| MS.gene03602.t1 | MTR_7g118020 | 77.358 | 53 | 12 | 0 | 300 | 352 | 224 | 276 | 1.21e-20 | 94.0 |
| MS.gene03602.t1 | MTR_7g089480 | 58.333 | 84 | 30 | 3 | 269 | 352 | 195 | 273 | 1.76e-20 | 93.2 |
| MS.gene03602.t1 | MTR_5g092815 | 58.491 | 53 | 21 | 1 | 300 | 352 | 168 | 219 | 6.95e-12 | 66.6 |
| MS.gene03602.t1 | MTR_5g022030 | 57.407 | 54 | 22 | 1 | 300 | 352 | 176 | 229 | 1.66e-11 | 65.9 |
| MS.gene03602.t1 | MTR_5g022030 | 57.407 | 54 | 22 | 1 | 300 | 352 | 176 | 229 | 1.76e-11 | 65.9 |
| MS.gene03602.t1 | MTR_1g026075 | 52.830 | 53 | 24 | 1 | 300 | 352 | 151 | 202 | 4.27e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03602.t1 | AT3G50530 | 84.906 | 53 | 8 | 0 | 300 | 352 | 228 | 280 | 1.03e-22 | 100 |
| MS.gene03602.t1 | AT3G50530 | 84.906 | 53 | 8 | 0 | 300 | 352 | 228 | 280 | 1.08e-22 | 100 |
| MS.gene03602.t1 | AT2G41140 | 64.286 | 84 | 25 | 3 | 269 | 352 | 177 | 255 | 1.16e-22 | 99.8 |
| MS.gene03602.t1 | AT3G19100 | 64.286 | 84 | 25 | 3 | 269 | 352 | 198 | 276 | 1.29e-22 | 99.8 |
| MS.gene03602.t1 | AT3G56760 | 61.905 | 84 | 27 | 3 | 269 | 352 | 178 | 256 | 2.94e-21 | 95.9 |
| MS.gene03602.t1 | AT1G49580 | 84.000 | 50 | 8 | 0 | 303 | 352 | 233 | 282 | 3.06e-21 | 95.9 |
| MS.gene03602.t1 | AT2G46700 | 79.245 | 53 | 11 | 0 | 300 | 352 | 42 | 94 | 3.69e-21 | 94.4 |
| MS.gene03602.t1 | AT2G46700 | 79.245 | 53 | 11 | 0 | 300 | 352 | 42 | 94 | 3.69e-21 | 94.4 |
| MS.gene03602.t1 | AT2G46700 | 79.245 | 53 | 11 | 0 | 300 | 352 | 223 | 275 | 5.86e-21 | 94.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 6.82e-20 | 91.3 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 6.82e-20 | 91.3 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 6.82e-20 | 91.3 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 8.23e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 8.23e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 8.23e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 8.57e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 8.65e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 9.00e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 9.21e-20 | 91.7 |
| MS.gene03602.t1 | AT3G08840 | 54.737 | 95 | 36 | 2 | 173 | 267 | 430 | 517 | 9.53e-20 | 91.7 |
| MS.gene03602.t1 | AT5G24430 | 71.698 | 53 | 15 | 0 | 300 | 352 | 223 | 275 | 3.17e-17 | 83.6 |
| MS.gene03602.t1 | AT3G49370 | 69.811 | 53 | 16 | 0 | 300 | 352 | 222 | 274 | 8.64e-17 | 82.4 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 5.37e-13 | 70.5 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 5.37e-13 | 70.5 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 6.38e-13 | 70.5 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 6.38e-13 | 70.5 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 6.64e-13 | 70.1 |
| MS.gene03602.t1 | AT5G66210 | 56.250 | 64 | 26 | 2 | 290 | 352 | 130 | 192 | 6.75e-13 | 70.1 |
| MS.gene03602.t1 | AT2G17890 | 61.111 | 54 | 20 | 1 | 300 | 352 | 185 | 238 | 1.64e-12 | 69.3 |
| MS.gene03602.t1 | AT4G36070 | 51.562 | 64 | 29 | 2 | 290 | 352 | 139 | 201 | 7.75e-12 | 67.0 |
| MS.gene03602.t1 | AT4G36070 | 51.562 | 64 | 29 | 2 | 290 | 352 | 139 | 201 | 9.43e-12 | 66.6 |
| MS.gene03602.t1 | AT5G12480 | 60.377 | 53 | 20 | 1 | 300 | 352 | 136 | 187 | 2.34e-11 | 65.5 |
| MS.gene03602.t1 | AT5G19450 | 60.377 | 53 | 20 | 1 | 300 | 352 | 134 | 185 | 5.08e-11 | 64.3 |
| MS.gene03602.t1 | AT5G19450 | 60.377 | 53 | 20 | 1 | 300 | 352 | 134 | 185 | 5.08e-11 | 64.3 |
| MS.gene03602.t1 | AT1G76040 | 56.604 | 53 | 22 | 1 | 300 | 352 | 189 | 240 | 7.58e-11 | 63.9 |
| MS.gene03602.t1 | AT1G76040 | 56.604 | 53 | 22 | 1 | 300 | 352 | 189 | 240 | 9.82e-11 | 63.5 |
Find 80 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTATTTAGCAATCCTATT+AGG | 0.175536 | 3.4:-32814598 | MS.gene03602:CDS |
| CGTATTTAGCAATCCTATTA+GGG | 0.233060 | 3.4:-32814597 | MS.gene03602:CDS |
| TCTCGTTCTTCAATTCCAAT+TGG | 0.315483 | 3.4:-32814798 | MS.gene03602:CDS |
| CTTGTTTGTTTCAACCCAAT+TGG | 0.330126 | 3.4:+32814783 | None:intergenic |
| CTCGTTCTTCAATTCCAATT+GGG | 0.346635 | 3.4:-32814797 | MS.gene03602:CDS |
| CGATGGGGAAATGACTTGTT+AGG | 0.358800 | 3.4:+32812681 | None:intergenic |
| GATTGGATGGTGGGCAAGAA+TGG | 0.363408 | 3.4:-32813708 | MS.gene03602:CDS |
| ACAGTAGACACACCCCTAAT+AGG | 0.368947 | 3.4:+32814584 | None:intergenic |
| TGCAGTTATATGAGCTGAAT+TGG | 0.369810 | 3.4:+32813776 | None:intergenic |
| AGGATCTAGCAGCGTCAAAT+TGG | 0.369926 | 3.4:-32814060 | MS.gene03602:CDS |
| CCACTGACTGAAGCAAGATT+TGG | 0.375072 | 3.4:+32812744 | None:intergenic |
| TCAACAACAGACTGAAACTT+TGG | 0.400810 | 3.4:+32810460 | None:intergenic |
| TTCTGCTTACAGCTTCACCT+TGG | 0.408495 | 3.4:-32813597 | MS.gene03602:intron |
| TTCATTATGCTCACCTCAAA+AGG | 0.409101 | 3.4:+32811567 | None:intergenic |
| TCTGCTTACAGCTTCACCTT+GGG | 0.416242 | 3.4:-32813596 | MS.gene03602:intron |
| TATAACTAGTTTAGTGTTGA+AGG | 0.425564 | 3.4:-32814637 | MS.gene03602:intron |
| AGAACGAGAAAGAGGTTAAG+AGG | 0.428691 | 3.4:+32814812 | None:intergenic |
| TCTTTGTTGAGATTGATAAC+AGG | 0.432388 | 3.4:-32811630 | MS.gene03602:CDS |
| TCATGAGTGGTACAAATGTT+TGG | 0.432409 | 3.4:-32812596 | MS.gene03602:CDS |
| TTTCTCATACGAACATCCTT+AGG | 0.443863 | 3.4:-32812797 | MS.gene03602:CDS |
| GACGCTGCTAGATCCTCCTT+TGG | 0.454897 | 3.4:+32814067 | None:intergenic |
| TACTCTATCGTAATGTGAAA+AGG | 0.464236 | 3.4:-32811088 | MS.gene03602:intron |
| GCAGCGTCAAATTGGTTCTC+AGG | 0.465205 | 3.4:-32814052 | MS.gene03602:intron |
| AATGTTTGGCTCAATTTGCT+AGG | 0.470391 | 3.4:-32812582 | MS.gene03602:CDS |
| AGTTTAGTGTTGAAGGGAAA+GGG | 0.471971 | 3.4:-32814630 | MS.gene03602:intron |
| TGCATCAGAGTTTCCTGCTA+AGG | 0.474003 | 3.4:-32813835 | MS.gene03602:CDS |
| CCAAATCTTGCTTCAGTCAG+TGG | 0.478349 | 3.4:-32812744 | MS.gene03602:CDS |
| TTAGAGGCAATGCGATGGAT+TGG | 0.483997 | 3.4:-32813725 | MS.gene03602:CDS |
| GAAGCATGCCAACAGGTTGT+TGG | 0.491366 | 3.4:-32813883 | MS.gene03602:CDS |
| CCTAATAGGATTGCTAAATA+CGG | 0.495314 | 3.4:+32814598 | None:intergenic |
| GAATTGGATGACTCAGCTGC+AGG | 0.500175 | 3.4:+32813792 | None:intergenic |
| TCACAAGCCAACTCCTTAGC+AGG | 0.504887 | 3.4:+32813822 | None:intergenic |
| CGAAATCAGATTGTGTTTGA+AGG | 0.505231 | 3.4:-32814745 | MS.gene03602:CDS |
| GGAATTGAAGAACGAGAAAG+AGG | 0.507511 | 3.4:+32814804 | None:intergenic |
| TGGATGGTGGGCAAGAATGG+AGG | 0.512994 | 3.4:-32813705 | MS.gene03602:intron |
| AGAGTTTCCTGCTAAGGAGT+TGG | 0.513288 | 3.4:-32813829 | MS.gene03602:CDS |
| GACGTTTCAGGTTATGTGAA+GGG | 0.515873 | 3.4:-32810936 | MS.gene03602:intron |
| CATGGTGAACAATGCTCCTA+AGG | 0.516746 | 3.4:+32812781 | None:intergenic |
| GATGCAAATGTAGGTGGAGC+AGG | 0.517727 | 3.4:+32813852 | None:intergenic |
| AATTCAGCTCATATAACTGC+AGG | 0.522347 | 3.4:-32813774 | MS.gene03602:CDS |
| TAGTTTAGTGTTGAAGGGAA+AGG | 0.525675 | 3.4:-32814631 | MS.gene03602:intron |
| TTTCCTTTGAAAACTATAGG+AGG | 0.529946 | 3.4:+32813549 | None:intergenic |
| TCCTTTGAAAACTATAGGAG+GGG | 0.531178 | 3.4:+32813551 | None:intergenic |
| TTCTGCTTACAACTTGAATG+AGG | 0.536102 | 3.4:-32811604 | MS.gene03602:CDS |
| ATAACTAGTTTAGTGTTGAA+GGG | 0.536696 | 3.4:-32814636 | MS.gene03602:intron |
| CAATTGGGTTGAAACAAACA+AGG | 0.537015 | 3.4:-32814782 | MS.gene03602:CDS |
| GTTTGTCAAGGAACTACCAT+AGG | 0.538784 | 3.4:+32814129 | None:intergenic |
| TATTTGTACCATGACAGCCT+TGG | 0.549299 | 3.4:+32810657 | None:intergenic |
| TTCCTTTGAAAACTATAGGA+GGG | 0.549800 | 3.4:+32813550 | None:intergenic |
| AGATGATGCCAAGGCTGTCA+TGG | 0.554908 | 3.4:-32810665 | MS.gene03602:CDS |
| TTGGAAACCGCAAGCAAGCA+TGG | 0.555181 | 3.4:+32812763 | None:intergenic |
| GAAATCAGATTGTGTTTGAA+GGG | 0.562352 | 3.4:-32814744 | MS.gene03602:intron |
| TTGTTCACCATGCTTGCTTG+CGG | 0.564726 | 3.4:-32812770 | MS.gene03602:CDS |
| AATGCGATGGATTGGATGGT+GGG | 0.566825 | 3.4:-32813717 | MS.gene03602:CDS |
| GGAAACTCTGATGCAAATGT+AGG | 0.568573 | 3.4:+32813843 | None:intergenic |
| CGACGTTTCAGGTTATGTGA+AGG | 0.570325 | 3.4:-32810937 | MS.gene03602:intron |
| AAAGTTTCAGTCTGTTGTTG+AGG | 0.571170 | 3.4:-32810458 | None:intergenic |
| ACGTTTCAGGTTATGTGAAG+GGG | 0.578083 | 3.4:-32810935 | MS.gene03602:intron |
| AATGTGGAGGGCGAAACCTA+TGG | 0.578503 | 3.4:-32814145 | MS.gene03602:CDS |
| TGTAGGTGGAGCAGGTATGT+TGG | 0.584114 | 3.4:+32813860 | None:intergenic |
| CAATGCGATGGATTGGATGG+TGG | 0.587993 | 3.4:-32813718 | MS.gene03602:CDS |
| AACTCTGATGCAAATGTAGG+TGG | 0.606514 | 3.4:+32813846 | None:intergenic |
| TAATGAAGATTTACCAAAGG+AGG | 0.609340 | 3.4:-32814080 | MS.gene03602:CDS |
| AATTGGATGACTCAGCTGCA+GGG | 0.612514 | 3.4:+32813793 | None:intergenic |
| CAGCTAAGATACAGAACCCA+AGG | 0.616341 | 3.4:+32813580 | None:intergenic |
| AGGCAATGCGATGGATTGGA+TGG | 0.617737 | 3.4:-32813721 | MS.gene03602:CDS |
| ATACTCAGAAGATGATGCCA+AGG | 0.618920 | 3.4:-32810674 | MS.gene03602:CDS |
| AAGTCATTTCCCCATCGTGA+AGG | 0.630032 | 3.4:-32812675 | MS.gene03602:CDS |
| CGTTTCAGGTTATGTGAAGG+GGG | 0.632420 | 3.4:-32810934 | MS.gene03602:intron |
| GTATTTAGCAATCCTATTAG+GGG | 0.633054 | 3.4:-32814596 | MS.gene03602:intron |
| GGGTCATTGACAGAATGTGG+AGG | 0.644623 | 3.4:-32814158 | MS.gene03602:intron |
| TATGTTGGCCAACAACCTGT+TGG | 0.647210 | 3.4:+32813875 | None:intergenic |
| GGTCATTGACAGAATGTGGA+GGG | 0.649146 | 3.4:-32814157 | MS.gene03602:intron |
| TGGTAATGAAGATTTACCAA+AGG | 0.652361 | 3.4:-32814083 | MS.gene03602:CDS |
| TATTAGACATGATATTGTCA+AGG | 0.655564 | 3.4:-32810906 | MS.gene03602:intron |
| GCACAGAGATCTTAAGCCTG+AGG | 0.658568 | 3.4:-32810596 | MS.gene03602:intron |
| ACTGAAACTTTGGTAAGCAT+AGG | 0.658671 | 3.4:+32810470 | None:intergenic |
| TTGGAGGTGACACATCAGAA+CGG | 0.662487 | 3.4:-32812629 | MS.gene03602:CDS |
| CGGCAAGTATCTCTCATGAG+TGG | 0.677323 | 3.4:-32812609 | MS.gene03602:CDS |
| AATTGGGTTGAAACAAACAA+GGG | 0.695621 | 3.4:-32814781 | MS.gene03602:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATATTTAAATATCTTA+GGG | - | chr3.4:32814762-32814781 | MS.gene03602:CDS | 10.0% |
| !! | TAAGAAAAAAATAAATAACA+TGG | + | chr3.4:32814092-32814111 | None:intergenic | 10.0% |
| !! | TAATCATATTTAAATATCTT+AGG | - | chr3.4:32814761-32814780 | MS.gene03602:CDS | 10.0% |
| !!! | CTTATTTTTATAAAGTTTTA+AGG | - | chr3.4:32812822-32812841 | MS.gene03602:intron | 10.0% |
| !!! | TGTTATTTATTTTTTTCTTA+AGG | - | chr3.4:32814092-32814111 | MS.gene03602:CDS | 10.0% |
| !!! | TTGAGTTTTTTTTTTATTAA+CGG | + | chr3.4:32813013-32813032 | None:intergenic | 10.0% |
| !! | ATAAAGTAAAATAGACATAA+CGG | + | chr3.4:32811606-32811625 | None:intergenic | 15.0% |
| !! | CTACAAAAATAATAGATAAT+TGG | + | chr3.4:32812921-32812940 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTTGTTTTATGT+TGG | - | chr3.4:32811030-32811049 | MS.gene03602:intron | 15.0% |
| !!! | TTTTCATAAATATGAGATTT+TGG | - | chr3.4:32812976-32812995 | MS.gene03602:intron | 15.0% |
| !!! | TTTTTTTTTGTGTTATATTG+TGG | - | chr3.4:32811289-32811308 | MS.gene03602:intron | 15.0% |
| !! | AAAAATAAGAGAATTGAAGT+TGG | + | chr3.4:32812811-32812830 | None:intergenic | 20.0% |
| !! | AAACATTAATGCTGAAAATT+AGG | + | chr3.4:32810831-32810850 | None:intergenic | 20.0% |
| !! | AAATGATACTTAAGCAATAT+TGG | + | chr3.4:32813412-32813431 | None:intergenic | 20.0% |
| !! | AAATTACCATTATAGAGAAA+TGG | + | chr3.4:32813852-32813871 | None:intergenic | 20.0% |
| !! | AATTACCATTATAGAGAAAT+GGG | + | chr3.4:32813851-32813870 | None:intergenic | 20.0% |
| !! | AATTATATGATGAATGAAAC+TGG | - | chr3.4:32812073-32812092 | MS.gene03602:intron | 20.0% |
| !! | AGAAAATAAAACACATTCAA+TGG | + | chr3.4:32811019-32811038 | None:intergenic | 20.0% |
| !! | CAATATAGATTGAATTAGAA+TGG | - | chr3.4:32813116-32813135 | MS.gene03602:intron | 20.0% |
| !! | CTAAAGTTGTAAAAATTTGA+AGG | + | chr3.4:32812754-32812773 | None:intergenic | 20.0% |
| !! | TGGTAAAAACAAAAATTAGA+AGG | + | chr3.4:32811346-32811365 | None:intergenic | 20.0% |
| !! | TTCTTTATTGCTTATACATA+TGG | - | chr3.4:32811811-32811830 | MS.gene03602:intron | 20.0% |
| !!! | ACTTGGTTTTTAAAATAATG+GGG | - | chr3.4:32811885-32811904 | MS.gene03602:intron | 20.0% |
| !!! | AGACTTGGTTTTTAAAATAA+TGG | - | chr3.4:32811883-32811902 | MS.gene03602:intron | 20.0% |
| !!! | ATTAGGTTTTACAATTATCA+TGG | + | chr3.4:32810814-32810833 | None:intergenic | 20.0% |
| !!! | CAAAAAGTTTTTGTCATTTT+TGG | - | chr3.4:32812629-32812648 | MS.gene03602:CDS | 20.0% |
| !!! | GACTTGGTTTTTAAAATAAT+GGG | - | chr3.4:32811884-32811903 | MS.gene03602:intron | 20.0% |
| !!! | TACTACATAATTTTCACATA+TGG | - | chr3.4:32813269-32813288 | MS.gene03602:intron | 20.0% |
| !!! | TTAGCATTGAAAAAGTAAAT+TGG | - | chr3.4:32812315-32812334 | MS.gene03602:intron | 20.0% |
| ! | AAAAAACAGCTTAAGAAATC+AGG | + | chr3.4:32811274-32811293 | None:intergenic | 25.0% |
| ! | AAAAACAGCTTAAGAAATCA+GGG | + | chr3.4:32811273-32811292 | None:intergenic | 25.0% |
| ! | AAAAACATGTTTGTTTGTCA+AGG | + | chr3.4:32811163-32811182 | None:intergenic | 25.0% |
| ! | AAAGATAGCAAACTTCAATT+AGG | + | chr3.4:32813993-32814012 | None:intergenic | 25.0% |
| ! | AATTTGATATGTGTACATCT+AGG | - | chr3.4:32811985-32812004 | MS.gene03602:intron | 25.0% |
| ! | ATAATTACACTTCCATTGAA+TGG | + | chr3.4:32812783-32812802 | None:intergenic | 25.0% |
| ! | ATGTACACATATCAAATTTC+AGG | + | chr3.4:32811983-32812002 | None:intergenic | 25.0% |
| ! | ATTACCATTATAGAGAAATG+GGG | + | chr3.4:32813850-32813869 | None:intergenic | 25.0% |
| ! | ATTGGTAAGTTTCTGATATT+TGG | + | chr3.4:32812903-32812922 | None:intergenic | 25.0% |
| ! | ATTTAAATTTCTCAATCTCC+AGG | + | chr3.4:32811851-32811870 | None:intergenic | 25.0% |
| ! | CAAAAACTAAAGTTGTAGTT+AGG | + | chr3.4:32812357-32812376 | None:intergenic | 25.0% |
| ! | CAATAAAGAATAAACAACAG+TGG | + | chr3.4:32811801-32811820 | None:intergenic | 25.0% |
| ! | CTCAAATTTCAATTCAATTC+AGG | + | chr3.4:32810609-32810628 | None:intergenic | 25.0% |
| ! | CTGAATTGAATTGAAATTTG+AGG | - | chr3.4:32810607-32810626 | MS.gene03602:CDS | 25.0% |
| ! | GCTACAGAGAAATATAAAAT+TGG | + | chr3.4:32813248-32813267 | None:intergenic | 25.0% |
| ! | TAGATTGAATTAGAATGGAA+TGG | - | chr3.4:32813121-32813140 | MS.gene03602:intron | 25.0% |
| ! | TATAAACTTAATTGCTAGGT+TGG | - | chr3.4:32813914-32813933 | MS.gene03602:intron | 25.0% |
| ! | TATTAGACATGATATTGTCA+AGG | - | chr3.4:32814371-32814390 | MS.gene03602:intron | 25.0% |
| ! | TTAAACCTAATAAATCACCT+TGG | + | chr3.4:32814239-32814258 | None:intergenic | 25.0% |
| ! | TTACAGTTATTCATAATGCA+AGG | - | chr3.4:32813346-32813365 | MS.gene03602:intron | 25.0% |
| ! | TTGCTATAAACTTAATTGCT+AGG | - | chr3.4:32813910-32813929 | MS.gene03602:intron | 25.0% |
| !! | ATAACTAGTTTAGTGTTGAA+GGG | - | chr3.4:32810641-32810660 | MS.gene03602:CDS | 25.0% |
| !! | ATTGAATTGAAATTTGAGGT+TGG | - | chr3.4:32810611-32810630 | MS.gene03602:CDS | 25.0% |
| !! | TATAACTAGTTTAGTGTTGA+AGG | - | chr3.4:32810640-32810659 | MS.gene03602:CDS | 25.0% |
| !!! | AAAGTTTTTGTCATTTTTGG+AGG | - | chr3.4:32812632-32812651 | MS.gene03602:CDS | 25.0% |
| !!! | AATTTTGATGTTGTTTGCTT+TGG | - | chr3.4:32813738-32813757 | MS.gene03602:CDS | 25.0% |
| !!! | ATTACAGACATTACTTTTAG+AGG | - | chr3.4:32811536-32811555 | MS.gene03602:intron | 25.0% |
| !!! | ATTTTGATGTTGTTTGCTTT+GGG | - | chr3.4:32813739-32813758 | MS.gene03602:CDS | 25.0% |
| !!! | GATTTTCCTTTGAAAACTAT+AGG | + | chr3.4:32811734-32811753 | None:intergenic | 25.0% |
| !!! | TAATTGAAGTTTGCTATCTT+TGG | - | chr3.4:32813992-32814011 | MS.gene03602:intron | 25.0% |
| !!! | TATTTTAAAAACCAAGTCTG+TGG | + | chr3.4:32811882-32811901 | None:intergenic | 25.0% |
| !!! | TTAGCTTTGTTTTGCATATT+GGG | - | chr3.4:32811631-32811650 | MS.gene03602:CDS | 25.0% |
| AAATGCTCTTTCTGTTATTC+AGG | - | chr3.4:32812451-32812470 | MS.gene03602:intron | 30.0% | |
| AACATGACAGAATAGGATAA+GGG | - | chr3.4:32812019-32812038 | MS.gene03602:intron | 30.0% | |
| AATAAGAGAATTGAAGTTGG+AGG | + | chr3.4:32812808-32812827 | None:intergenic | 30.0% | |
| AATAATAACTCCTTCCCAAA+AGG | + | chr3.4:32812279-32812298 | None:intergenic | 30.0% | |
| AGTACTTATGTCTTAGTCAT+TGG | + | chr3.4:32813055-32813074 | None:intergenic | 30.0% | |
| ATAGCAAACTTCAATTAGGT+AGG | + | chr3.4:32813989-32814008 | None:intergenic | 30.0% | |
| ATGATTTATTGCTTCTTCAG+AGG | - | chr3.4:32814574-32814593 | MS.gene03602:intron | 30.0% | |
| ATTGTATTCCAGAGCTTAAA+CGG | + | chr3.4:32813473-32813492 | None:intergenic | 30.0% | |
| CCTAATAGGATTGCTAAATA+CGG | + | chr3.4:32810682-32810701 | None:intergenic | 30.0% | |
| CGTATTTAGCAATCCTATTA+GGG | - | chr3.4:32810680-32810699 | MS.gene03602:CDS | 30.0% | |
| CTTTAGTTATGTCCATTCAA+TGG | - | chr3.4:32812768-32812787 | MS.gene03602:CDS | 30.0% | |
| GAAATCAGATTGTGTTTGAA+GGG | - | chr3.4:32810533-32810552 | MS.gene03602:intron | 30.0% | |
| GATAAACAACATGACAGAAT+AGG | - | chr3.4:32812012-32812031 | MS.gene03602:intron | 30.0% | |
| GTATTTAGCAATCCTATTAG+GGG | - | chr3.4:32810681-32810700 | MS.gene03602:CDS | 30.0% | |
| GTTATTGTATCTGTTTCCTT+TGG | + | chr3.4:32813166-32813185 | None:intergenic | 30.0% | |
| GTTTATAGCAACTATGTTAG+AGG | + | chr3.4:32813901-32813920 | None:intergenic | 30.0% | |
| TAATGAAGATTTACCAAAGG+AGG | - | chr3.4:32811197-32811216 | MS.gene03602:intron | 30.0% | |
| TACTCTATCGTAATGTGAAA+AGG | - | chr3.4:32814189-32814208 | MS.gene03602:intron | 30.0% | |
| TCAACATTAGATGCAATGAA+GGG | + | chr3.4:32813607-32813626 | None:intergenic | 30.0% | |
| TCTTTCATTTGTCTTTCAGA+TGG | - | chr3.4:32814713-32814732 | MS.gene03602:intron | 30.0% | |
| TGAAGAAGCAATAAATCATG+TGG | + | chr3.4:32814573-32814592 | None:intergenic | 30.0% | |
| TGAATTAGAATGGAATGGAA+TGG | - | chr3.4:32813126-32813145 | MS.gene03602:intron | 30.0% | |
| TGTAAGCAGAAAAAGAAATG+AGG | + | chr3.4:32811671-32811690 | None:intergenic | 30.0% | |
| TGTTTCATTCTGTCAACTTA+TGG | - | chr3.4:32813074-32813093 | MS.gene03602:intron | 30.0% | |
| ! | AAATCAGGGTTTAAAGTGAA+TGG | + | chr3.4:32811259-32811278 | None:intergenic | 30.0% |
| ! | AATCAGGGTTTAAAGTGAAT+GGG | + | chr3.4:32811258-32811277 | None:intergenic | 30.0% |
| ! | ATAGCCGTCTTAAAATCTTT+TGG | - | chr3.4:32811097-32811116 | MS.gene03602:CDS | 30.0% |
| ! | TAGCCGTCTTAAAATCTTTT+GGG | - | chr3.4:32811098-32811117 | MS.gene03602:CDS | 30.0% |
| ! | TCTTTGTTGAGATTGATAAC+AGG | - | chr3.4:32813647-32813666 | MS.gene03602:intron | 30.0% |
| ! | TGGTAATGAAGATTTACCAA+AGG | - | chr3.4:32811194-32811213 | MS.gene03602:intron | 30.0% |
| ! | TTCCTTTGAAAACTATAGGA+GGG | + | chr3.4:32811730-32811749 | None:intergenic | 30.0% |
| ! | TTTCCTTTGAAAACTATAGG+AGG | + | chr3.4:32811731-32811750 | None:intergenic | 30.0% |
| ! | TTTGAAGGTTTTCTTGATTG+TGG | + | chr3.4:32812739-32812758 | None:intergenic | 30.0% |
| !! | AATTGGGTTGAAACAAACAA+GGG | - | chr3.4:32810496-32810515 | MS.gene03602:CDS | 30.0% |
| !! | ATGGCTTTATATGTATAACC+TGG | - | chr3.4:32811830-32811849 | MS.gene03602:intron | 30.0% |
| !! | ATGTTTTGTGCATTGATGTA+TGG | - | chr3.4:32812403-32812422 | MS.gene03602:intron | 30.0% |
| !! | TTCGAAGATTTTGATCTACT+TGG | + | chr3.4:32812575-32812594 | None:intergenic | 30.0% |
| !!! | ATAACAGAAAGAGCATTTTC+AGG | + | chr3.4:32812449-32812468 | None:intergenic | 30.0% |
| !!! | GTTAGCTTTGTTTTGCATAT+TGG | - | chr3.4:32811630-32811649 | MS.gene03602:CDS | 30.0% |
| !!! | TTTTTCTTAAGGTATTGTGC+TGG | - | chr3.4:32814103-32814122 | MS.gene03602:CDS | 30.0% |
| AAATGTATGTAGTGACACCA+AGG | - | chr3.4:32814219-32814238 | MS.gene03602:intron | 35.0% | |
| AAGGTTTCCTAACATTCTGA+GGG | - | chr3.4:32813365-32813384 | MS.gene03602:intron | 35.0% | |
| AATGAAGTCAACTTACGTCA+AGG | + | chr3.4:32811756-32811775 | None:intergenic | 35.0% | |
| AATGCGCATTATATGATGAC+TGG | - | chr3.4:32813819-32813838 | MS.gene03602:CDS | 35.0% | |
| AATTCAGCTCATATAACTGC+AGG | - | chr3.4:32811503-32811522 | MS.gene03602:intron | 35.0% | |
| AATTTGTCTTTCCACAGACT+TGG | - | chr3.4:32811868-32811887 | MS.gene03602:intron | 35.0% | |
| ACAGCAAAAACAAGTAGCAA+TGG | + | chr3.4:32810577-32810596 | None:intergenic | 35.0% | |
| ACGATGCATAAGAAAACATC+AGG | - | chr3.4:32811942-32811961 | MS.gene03602:intron | 35.0% | |
| ACTGAAACTTTGGTAAGCAT+AGG | + | chr3.4:32814810-32814829 | None:intergenic | 35.0% | |
| ACTGTATAGGAAAGAACTTG+TGG | - | chr3.4:32810711-32810730 | MS.gene03602:intron | 35.0% | |
| ATAGGATAAGGGTTAAGATC+TGG | - | chr3.4:32812030-32812049 | MS.gene03602:intron | 35.0% | |
| ATTCGCTAGATGAATAGTGA+TGG | - | chr3.4:32810911-32810930 | MS.gene03602:CDS | 35.0% | |
| ATTTATTGCTTCTTCAGAGG+AGG | - | chr3.4:32814577-32814596 | MS.gene03602:intron | 35.0% | |
| CAACATGACAGAATAGGATA+AGG | - | chr3.4:32812018-32812037 | MS.gene03602:intron | 35.0% | |
| CAGCTAAAAACAGCACTAAT+AGG | + | chr3.4:32810958-32810977 | None:intergenic | 35.0% | |
| CCGTATTTAGCAATCCTATT+AGG | - | chr3.4:32810679-32810698 | MS.gene03602:CDS | 35.0% | |
| CGAAACAGAATAGAACAGAA+CGG | + | chr3.4:32812176-32812195 | None:intergenic | 35.0% | |
| CGAAATCAGATTGTGTTTGA+AGG | - | chr3.4:32810532-32810551 | MS.gene03602:intron | 35.0% | |
| CGAATAACAAGGAATTCCAT+TGG | + | chr3.4:32814145-32814164 | None:intergenic | 35.0% | |
| CTCGTTCTTCAATTCCAATT+GGG | - | chr3.4:32810480-32810499 | MS.gene03602:CDS | 35.0% | |
| CTGTATAGGAAAGAACTTGT+GGG | - | chr3.4:32810712-32810731 | MS.gene03602:intron | 35.0% | |
| CTTGTTTGTTTCAACCCAAT+TGG | + | chr3.4:32810497-32810516 | None:intergenic | 35.0% | |
| GACAAGTGTACTTGATGAAA+AGG | + | chr3.4:32814034-32814053 | None:intergenic | 35.0% | |
| GATATGTGTACATCTAGGTA+AGG | - | chr3.4:32811990-32812009 | MS.gene03602:intron | 35.0% | |
| GCTAAAAGTCATGTGTTGTA+AGG | - | chr3.4:32812376-32812395 | MS.gene03602:intron | 35.0% | |
| GTCAACATTAGATGCAATGA+AGG | + | chr3.4:32813608-32813627 | None:intergenic | 35.0% | |
| TAAATCATGTGGCTAGTAAG+TGG | + | chr3.4:32814562-32814581 | None:intergenic | 35.0% | |
| TATGCATCGTCAGCTAAATA+GGG | + | chr3.4:32811932-32811951 | None:intergenic | 35.0% | |
| TCAACAACAGACTGAAACTT+TGG | + | chr3.4:32814820-32814839 | None:intergenic | 35.0% | |
| TCATGAGTGGTACAAATGTT+TGG | - | chr3.4:32812681-32812700 | MS.gene03602:CDS | 35.0% | |
| TCTCGTTCTTCAATTCCAAT+TGG | - | chr3.4:32810479-32810498 | MS.gene03602:CDS | 35.0% | |
| TGACACCAAGGTGATTTATT+AGG | - | chr3.4:32814231-32814250 | MS.gene03602:intron | 35.0% | |
| TGCAGTTATATGAGCTGAAT+TGG | + | chr3.4:32811504-32811523 | None:intergenic | 35.0% | |
| TGCTGCGTAAAACAAAGAAA+AGG | + | chr3.4:32813960-32813979 | None:intergenic | 35.0% | |
| TTATGCATCGTCAGCTAAAT+AGG | + | chr3.4:32811933-32811952 | None:intergenic | 35.0% | |
| TTCATTATGCTCACCTCAAA+AGG | + | chr3.4:32813713-32813732 | None:intergenic | 35.0% | |
| TTCTGCTTACAACTTGAATG+AGG | - | chr3.4:32813673-32813692 | MS.gene03602:intron | 35.0% | |
| TTTATTGCTTCTTCAGAGGA+GGG | - | chr3.4:32814578-32814597 | MS.gene03602:intron | 35.0% | |
| TTTCTCATACGAACATCCTT+AGG | - | chr3.4:32812480-32812499 | MS.gene03602:intron | 35.0% | |
| TTTGTAGTGTAAGTAGAGCA+TGG | - | chr3.4:32812934-32812953 | MS.gene03602:intron | 35.0% | |
| ! | AAGTACACTTGTCTCTGAAA+AGG | - | chr3.4:32814041-32814060 | MS.gene03602:intron | 35.0% |
| ! | AATGTTTGGCTCAATTTGCT+AGG | - | chr3.4:32812695-32812714 | MS.gene03602:CDS | 35.0% |
| ! | AGCCGTCTTAAAATCTTTTG+GGG | - | chr3.4:32811099-32811118 | MS.gene03602:CDS | 35.0% |
| ! | AGTTTAGTGTTGAAGGGAAA+GGG | - | chr3.4:32810647-32810666 | MS.gene03602:CDS | 35.0% |
| ! | ATTTTGTCATCTTCAGAGTG+TGG | - | chr3.4:32814657-32814676 | MS.gene03602:intron | 35.0% |
| ! | CTCTTTCTGTTATTCAGGTT+GGG | - | chr3.4:32812456-32812475 | MS.gene03602:intron | 35.0% |
| ! | GAGATGAAAAGTATAACCTG+TGG | - | chr3.4:32812234-32812253 | MS.gene03602:intron | 35.0% |
| ! | GTTCTGTTATCCAACCTTTT+GGG | - | chr3.4:32812262-32812281 | MS.gene03602:intron | 35.0% |
| ! | TAGTTTAGTGTTGAAGGGAA+AGG | - | chr3.4:32810646-32810665 | MS.gene03602:CDS | 35.0% |
| ! | TCCTTTGAAAACTATAGGAG+GGG | + | chr3.4:32811729-32811748 | None:intergenic | 35.0% |
| ! | TGCTTATTGATGTGTTGTTG+TGG | - | chr3.4:32813545-32813564 | MS.gene03602:CDS | 35.0% |
| ! | TGTTCTGTTATCCAACCTTT+TGG | - | chr3.4:32812261-32812280 | MS.gene03602:intron | 35.0% |
| !! | AATGGAATGGATTATGTGAC+TGG | - | chr3.4:32813139-32813158 | MS.gene03602:intron | 35.0% |
| !! | CAATTGGGTTGAAACAAACA+AGG | - | chr3.4:32810495-32810514 | MS.gene03602:CDS | 35.0% |
| !! | GAATATACCGTATTGACTTG+AGG | - | chr3.4:32812099-32812118 | MS.gene03602:intron | 35.0% |
| !! | GACCCCAAAAGATTTTAAGA+CGG | + | chr3.4:32811104-32811123 | None:intergenic | 35.0% |
| !!! | CATGTTTTTGAAGCACAATC+TGG | - | chr3.4:32811174-32811193 | MS.gene03602:intron | 35.0% |
| !!! | CTATTAGTGCTGTTTTTAGC+TGG | - | chr3.4:32810956-32810975 | MS.gene03602:intron | 35.0% |
| !!! | CTTGTTTTTGCTGTGAAACA+TGG | - | chr3.4:32810583-32810602 | MS.gene03602:intron | 35.0% |
| !!! | TTCCTTGTTATTCGTTTTGC+TGG | - | chr3.4:32814151-32814170 | MS.gene03602:intron | 35.0% |
| AAACACCTGTTTAGCCAAAC+AGG | + | chr3.4:32813766-32813785 | None:intergenic | 40.0% | |
| AACACCTGTTTAGCCAAACA+GGG | + | chr3.4:32813765-32813784 | None:intergenic | 40.0% | |
| AACTCATCTTACGACAGTAG+AGG | - | chr3.4:32812212-32812231 | MS.gene03602:intron | 40.0% | |
| AACTCTGATGCAAATGTAGG+TGG | + | chr3.4:32811434-32811453 | None:intergenic | 40.0% | |
| ACAGAATCCCTCAGAATGTT+AGG | + | chr3.4:32813375-32813394 | None:intergenic | 40.0% | |
| AGAACGAGAAAGAGGTTAAG+AGG | + | chr3.4:32810468-32810487 | None:intergenic | 40.0% | |
| AGTTTGTGTCTAACTGCCAA+TGG | - | chr3.4:32814126-32814145 | MS.gene03602:CDS | 40.0% | |
| ATAACTCCTTCCCAAAAGGT+TGG | + | chr3.4:32812275-32812294 | None:intergenic | 40.0% | |
| ATACTCAGAAGATGATGCCA+AGG | - | chr3.4:32814603-32814622 | MS.gene03602:CDS | 40.0% | |
| ATCAGAGCCCAAATGAACAA+GGG | + | chr3.4:32813323-32813342 | None:intergenic | 40.0% | |
| ATTCAATGGAGAGCCATACT+GGG | + | chr3.4:32811005-32811024 | None:intergenic | 40.0% | |
| CAACAGTGGCATGTTAAATG+AGG | + | chr3.4:32811787-32811806 | None:intergenic | 40.0% | |
| CAAGGTTTCCTAACATTCTG+AGG | - | chr3.4:32813364-32813383 | MS.gene03602:intron | 40.0% | |
| CACCAGCAAAACGAATAACA+AGG | + | chr3.4:32814156-32814175 | None:intergenic | 40.0% | |
| CAGAATAGAACAGAACGGAT+TGG | + | chr3.4:32812171-32812190 | None:intergenic | 40.0% | |
| CTGAATACTATCGACGTTTC+AGG | - | chr3.4:32814329-32814348 | MS.gene03602:intron | 40.0% | |
| CTGACCCCATTTCTCTATAA+TGG | - | chr3.4:32813843-32813862 | MS.gene03602:CDS | 40.0% | |
| GATAACAGAACAGAAACCAC+AGG | + | chr3.4:32812253-32812272 | None:intergenic | 40.0% | |
| GCTAAATAGGGTTGAGTACA+TGG | + | chr3.4:32811920-32811939 | None:intergenic | 40.0% | |
| GCTCTTTCTGTTATTCAGGT+TGG | - | chr3.4:32812455-32812474 | MS.gene03602:intron | 40.0% | |
| GGAAACTCTGATGCAAATGT+AGG | + | chr3.4:32811437-32811456 | None:intergenic | 40.0% | |
| GGAATTGAAGAACGAGAAAG+AGG | + | chr3.4:32810476-32810495 | None:intergenic | 40.0% | |
| GTCTTAGCCTCAAGTCAATA+CGG | + | chr3.4:32812109-32812128 | None:intergenic | 40.0% | |
| GTTTGTCAAGGAACTACCAT+AGG | + | chr3.4:32811151-32811170 | None:intergenic | 40.0% | |
| TATTTGTACCATGACAGCCT+TGG | + | chr3.4:32814623-32814642 | None:intergenic | 40.0% | |
| TGAAAGAATATGCTCACCTC+AGG | + | chr3.4:32814700-32814719 | None:intergenic | 40.0% | |
| TGAGGCTAAGACTAGCATAA+GGG | - | chr3.4:32812117-32812136 | MS.gene03602:intron | 40.0% | |
| TTGAGGCTAAGACTAGCATA+AGG | - | chr3.4:32812116-32812135 | MS.gene03602:intron | 40.0% | |
| !! | ACGTTTCAGGTTATGTGAAG+GGG | - | chr3.4:32814342-32814361 | MS.gene03602:intron | 40.0% |
| !! | GACGTTTCAGGTTATGTGAA+GGG | - | chr3.4:32814341-32814360 | MS.gene03602:intron | 40.0% |
| !! | TACTTTTAGAGGCAATGCGA+TGG | - | chr3.4:32811547-32811566 | MS.gene03602:intron | 40.0% |
| !! | TGTTATCCAACCTTTTGGGA+AGG | - | chr3.4:32812266-32812285 | MS.gene03602:intron | 40.0% |
| !! | TTTTTGAGCTCCTTCACGAT+GGG | + | chr3.4:32812615-32812634 | None:intergenic | 40.0% |
| AAGTCATTTCCCCATCGTGA+AGG | - | chr3.4:32812602-32812621 | MS.gene03602:CDS | 45.0% | |
| AATTGGATGACTCAGCTGCA+GGG | + | chr3.4:32811487-32811506 | None:intergenic | 45.0% | |
| ACAGTAGACACACCCCTAAT+AGG | + | chr3.4:32810696-32810715 | None:intergenic | 45.0% | |
| AGAGTTTCCTGCTAAGGAGT+TGG | - | chr3.4:32811448-32811467 | MS.gene03602:intron | 45.0% | |
| AGCTCAATCCGTTTAAGCTC+TGG | - | chr3.4:32813462-32813481 | MS.gene03602:intron | 45.0% | |
| AGGATCTAGCAGCGTCAAAT+TGG | - | chr3.4:32811217-32811236 | MS.gene03602:intron | 45.0% | |
| CAGCTAAGATACAGAACCCA+AGG | + | chr3.4:32811700-32811719 | None:intergenic | 45.0% | |
| CATGGTGAACAATGCTCCTA+AGG | + | chr3.4:32812499-32812518 | None:intergenic | 45.0% | |
| CATTCAATGGAGAGCCATAC+TGG | + | chr3.4:32811006-32811025 | None:intergenic | 45.0% | |
| CCAAATCTTGCTTCAGTCAG+TGG | - | chr3.4:32812533-32812552 | MS.gene03602:intron | 45.0% | |
| CGATGACGAGGTAATGACTA+AGG | + | chr3.4:32813208-32813227 | None:intergenic | 45.0% | |
| CTCGATGCCCTTGTTCATTT+GGG | - | chr3.4:32813313-32813332 | MS.gene03602:intron | 45.0% | |
| GATCAGAGCCCAAATGAACA+AGG | + | chr3.4:32813324-32813343 | None:intergenic | 45.0% | |
| GCATGAAATAGAGCCGCTAT+CGG | - | chr3.4:32814414-32814433 | MS.gene03602:intron | 45.0% | |
| GGTCATTGACAGAATGTGGA+GGG | - | chr3.4:32811120-32811139 | MS.gene03602:intron | 45.0% | |
| GTTGATGTAGTACCCCAGTA+TGG | - | chr3.4:32810989-32811008 | MS.gene03602:intron | 45.0% | |
| GTTTGCATCTTCTGTCGAAG+TGG | + | chr3.4:32811366-32811385 | None:intergenic | 45.0% | |
| TATGTTGGCCAACAACCTGT+TGG | + | chr3.4:32811405-32811424 | None:intergenic | 45.0% | |
| TCTGCTTACAGCTTCACCTT+GGG | - | chr3.4:32811681-32811700 | MS.gene03602:intron | 45.0% | |
| TGCATCAGAGTTTCCTGCTA+AGG | - | chr3.4:32811442-32811461 | MS.gene03602:intron | 45.0% | |
| TTAGAGGCAATGCGATGGAT+TGG | - | chr3.4:32811552-32811571 | MS.gene03602:intron | 45.0% | |
| TTCAATGGAGAGCCATACTG+GGG | + | chr3.4:32811004-32811023 | None:intergenic | 45.0% | |
| TTCTGCTTACAGCTTCACCT+TGG | - | chr3.4:32811680-32811699 | MS.gene03602:intron | 45.0% | |
| TTGAAATAACGCCGCTAACG+CGG | + | chr3.4:32814508-32814527 | None:intergenic | 45.0% | |
| TTGGAGGTGACACATCAGAA+CGG | - | chr3.4:32812648-32812667 | MS.gene03602:CDS | 45.0% | |
| TTGGGGTCATTGACAGAATG+TGG | - | chr3.4:32811116-32811135 | MS.gene03602:intron | 45.0% | |
| TTGTTCACCATGCTTGCTTG+CGG | - | chr3.4:32812507-32812526 | MS.gene03602:intron | 45.0% | |
| ! | CCACTGACTGAAGCAAGATT+TGG | + | chr3.4:32812536-32812555 | None:intergenic | 45.0% |
| ! | GACTGATGTAGCACCTTTTG+AGG | - | chr3.4:32813697-32813716 | MS.gene03602:intron | 45.0% |
| ! | GCCCCTCCTATAGTTTTCAA+AGG | - | chr3.4:32811725-32811744 | MS.gene03602:intron | 45.0% |
| ! | GGATTATGTGACTGGTCCAA+AGG | - | chr3.4:32813147-32813166 | MS.gene03602:intron | 45.0% |
| ! | TAGGGGTGTGTCTACTGTAT+AGG | - | chr3.4:32810698-32810717 | MS.gene03602:intron | 45.0% |
| ! | TTTTGAGCTCCTTCACGATG+GGG | + | chr3.4:32812614-32812633 | None:intergenic | 45.0% |
| !! | AATGCGATGGATTGGATGGT+GGG | - | chr3.4:32811560-32811579 | MS.gene03602:intron | 45.0% |
| !! | CGACGTTTCAGGTTATGTGA+AGG | - | chr3.4:32814340-32814359 | MS.gene03602:intron | 45.0% |
| !! | CGATGGGGAAATGACTTGTT+AGG | + | chr3.4:32812599-32812618 | None:intergenic | 45.0% |
| !! | CGTTTCAGGTTATGTGAAGG+GGG | - | chr3.4:32814343-32814362 | MS.gene03602:intron | 45.0% |
| !! | CTTTTTGAGCTCCTTCACGA+TGG | + | chr3.4:32812616-32812635 | None:intergenic | 45.0% |
| AATGTGGAGGGCGAAACCTA+TGG | - | chr3.4:32811132-32811151 | MS.gene03602:intron | 50.0% | |
| AGATGATGCCAAGGCTGTCA+TGG | - | chr3.4:32814612-32814631 | MS.gene03602:CDS | 50.0% | |
| CATGTGGCTAGTAAGTGGCA+AGG | + | chr3.4:32814557-32814576 | None:intergenic | 50.0% | |
| CGGCAAGTATCTCTCATGAG+TGG | - | chr3.4:32812668-32812687 | MS.gene03602:CDS | 50.0% | |
| GAAGCATGCCAACAGGTTGT+TGG | - | chr3.4:32811394-32811413 | MS.gene03602:intron | 50.0% | |
| GAATTGGATGACTCAGCTGC+AGG | + | chr3.4:32811488-32811507 | None:intergenic | 50.0% | |
| GATGCAAATGTAGGTGGAGC+AGG | + | chr3.4:32811428-32811447 | None:intergenic | 50.0% | |
| GCACAGAGATCTTAAGCCTG+AGG | - | chr3.4:32814681-32814700 | MS.gene03602:intron | 50.0% | |
| GCTCGATGCCCTTGTTCATT+TGG | - | chr3.4:32813312-32813331 | MS.gene03602:intron | 50.0% | |
| GGGTCATTGACAGAATGTGG+AGG | - | chr3.4:32811119-32811138 | MS.gene03602:intron | 50.0% | |
| TCACAAGCCAACTCCTTAGC+AGG | + | chr3.4:32811458-32811477 | None:intergenic | 50.0% | |
| TGTAGGTGGAGCAGGTATGT+TGG | + | chr3.4:32811420-32811439 | None:intergenic | 50.0% | |
| TTGGAAACCGCAAGCAAGCA+TGG | + | chr3.4:32812517-32812536 | None:intergenic | 50.0% | |
| ! | CTTTTGCGAAGCATGCCAAC+AGG | - | chr3.4:32811387-32811406 | MS.gene03602:intron | 50.0% |
| ! | GCAGCGTCAAATTGGTTCTC+AGG | - | chr3.4:32811225-32811244 | MS.gene03602:intron | 50.0% |
| ! | TGTTTGCTTTGGGCCCTGTT+TGG | - | chr3.4:32813749-32813768 | MS.gene03602:CDS | 50.0% |
| !! | AGGCAATGCGATGGATTGGA+TGG | - | chr3.4:32811556-32811575 | MS.gene03602:intron | 50.0% |
| !! | CAATGCGATGGATTGGATGG+TGG | - | chr3.4:32811559-32811578 | MS.gene03602:intron | 50.0% |
| !! | GATTGGATGGTGGGCAAGAA+TGG | - | chr3.4:32811569-32811588 | MS.gene03602:intron | 50.0% |
| !! | TACTCACTTCTGGGGTGAGA+CGG | + | chr3.4:32814472-32814491 | None:intergenic | 50.0% |
| AGTAGCGAGACACGATGACG+AGG | + | chr3.4:32813220-32813239 | None:intergenic | 55.0% | |
| ATGGCCGCTACTCACTTCTG+GGG | + | chr3.4:32814480-32814499 | None:intergenic | 55.0% | |
| CTCACCCCAGAAGTGAGTAG+CGG | - | chr3.4:32814473-32814492 | MS.gene03602:intron | 55.0% | |
| GACGCTGCTAGATCCTCCTT+TGG | + | chr3.4:32811213-32811232 | None:intergenic | 55.0% | |
| GATGGCCGCTACTCACTTCT+GGG | + | chr3.4:32814481-32814500 | None:intergenic | 55.0% | |
| TGATGGCCGCTACTCACTTC+TGG | + | chr3.4:32814482-32814501 | None:intergenic | 55.0% | |
| TGGGCCCTGTTTGGCTAAAC+AGG | - | chr3.4:32813758-32813777 | MS.gene03602:CDS | 55.0% | |
| !! | ACAAGGGCATCGAGCATGAC+TGG | + | chr3.4:32813307-32813326 | None:intergenic | 55.0% |
| !! | TGGATGGTGGGCAAGAATGG+AGG | - | chr3.4:32811572-32811591 | MS.gene03602:intron | 55.0% |
| CTGGGGTGAGACGGTGCATG+TGG | + | chr3.4:32814463-32814482 | None:intergenic | 65.0% | |
| GGCCATCAGAGCCGCGTTAG+CGG | - | chr3.4:32814494-32814513 | MS.gene03602:intron | 65.0% | |
| CGCTATCGGCGCAGTGCCGT+GGG | - | chr3.4:32814428-32814447 | MS.gene03602:intron | 70.0% | |
| ! | CCACGGCACTGCGCCGATAG+CGG | + | chr3.4:32814430-32814449 | None:intergenic | 70.0% |
| ! | CGCCGCTAACGCGGCTCTGA+TGG | + | chr3.4:32814499-32814518 | None:intergenic | 70.0% |
| CCGCTATCGGCGCAGTGCCG+TGG | - | chr3.4:32814427-32814446 | MS.gene03602:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 32810460 | 32814839 | 32810460 | ID=MS.gene03602 |
| chr3.4 | mRNA | 32810460 | 32814839 | 32810460 | ID=MS.gene03602.t1;Parent=MS.gene03602 |
| chr3.4 | exon | 32814745 | 32814839 | 32814745 | ID=MS.gene03602.t1.exon1;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32814745 | 32814839 | 32814745 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32814597 | 32814645 | 32814597 | ID=MS.gene03602.t1.exon2;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32814597 | 32814645 | 32814597 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32814053 | 32814167 | 32814053 | ID=MS.gene03602.t1.exon3;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32814053 | 32814167 | 32814053 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32813706 | 32813924 | 32813706 | ID=MS.gene03602.t1.exon4;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32813706 | 32813924 | 32813706 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32813540 | 32813607 | 32813540 | ID=MS.gene03602.t1.exon5;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32813540 | 32813607 | 32813540 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32812572 | 32812826 | 32812572 | ID=MS.gene03602.t1.exon6;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32812572 | 32812826 | 32812572 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32811581 | 32811652 | 32811581 | ID=MS.gene03602.t1.exon7;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32811581 | 32811652 | 32811581 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32811089 | 32811120 | 32811089 | ID=MS.gene03602.t1.exon8;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32811089 | 32811120 | 32811089 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32810907 | 32810948 | 32810907 | ID=MS.gene03602.t1.exon9;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32810907 | 32810948 | 32810907 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32810597 | 32810705 | 32810597 | ID=MS.gene03602.t1.exon10;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32810597 | 32810705 | 32810597 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| chr3.4 | exon | 32810460 | 32810516 | 32810460 | ID=MS.gene03602.t1.exon11;Parent=MS.gene03602.t1 |
| chr3.4 | CDS | 32810460 | 32810516 | 32810460 | ID=cds.MS.gene03602.t1;Parent=MS.gene03602.t1 |
| Gene Sequence |
| Protein sequence |
