AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036069

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036069.t1 MTR_1g069805 93.878 147 9 0 1 147 1 147 4.62e-100 290
MS.gene036069.t1 MTR_1g069805 93.878 49 3 0 136 184 227 275 3.21e-27 103
MS.gene036069.t1 MTR_7g097090 87.075 147 19 0 1 147 1 147 1.93e-92 271
MS.gene036069.t1 MTR_7g097090 46.753 77 29 3 110 184 225 291 7.51e-12 62.8
MS.gene036069.t1 MTR_2g078700 60.938 128 50 0 8 135 21 148 1.21e-55 180
MS.gene036069.t1 MTR_1g008740 57.037 135 57 1 2 135 19 153 1.68e-54 177
MS.gene036069.t1 MTR_1g008740 57.037 135 57 1 2 135 5 139 1.90e-54 176
MS.gene036069.t1 MTR_3g109340 59.055 127 52 0 9 135 21 147 4.05e-53 173
MS.gene036069.t1 MTR_3g109340 59.055 127 52 0 9 135 21 147 4.30e-53 173
MS.gene036069.t1 MTR_2g064470 62.308 130 45 2 6 135 7 132 7.08e-53 171
MS.gene036069.t1 MTR_6g032770 56.391 133 58 0 10 142 18 150 4.05e-51 168
MS.gene036069.t1 MTR_3g116070 57.480 127 53 1 10 135 23 149 6.71e-51 167
MS.gene036069.t1 MTR_3g070030 57.143 126 52 1 10 135 19 142 7.13e-51 167
MS.gene036069.t1 MTR_4g108760 57.937 126 51 1 10 135 17 140 8.44e-51 167
MS.gene036069.t1 MTR_6g012670 57.143 126 52 1 10 135 20 143 1.06e-49 163
MS.gene036069.t1 MTR_3g435150 57.143 126 52 1 10 135 16 139 2.63e-49 162
MS.gene036069.t1 MTR_6g477900 52.778 144 61 3 10 151 6 144 6.08e-49 159
MS.gene036069.t1 MTR_7g085260 54.887 133 58 1 5 135 12 144 1.24e-48 162
MS.gene036069.t1 MTR_2g064090 57.576 132 52 2 9 138 5 134 2.36e-48 160
MS.gene036069.t1 MTR_6g084430 56.693 127 53 1 9 135 4 128 6.26e-48 159
MS.gene036069.t1 MTR_5g021710 54.962 131 54 2 8 135 6 134 1.37e-47 159
MS.gene036069.t1 MTR_7g011130 54.472 123 54 1 13 135 22 142 2.27e-47 158
MS.gene036069.t1 MTR_4g036030 52.672 131 57 2 8 135 5 133 2.37e-47 158
MS.gene036069.t1 MTR_2g080010 51.389 144 66 1 9 148 14 157 5.13e-47 157
MS.gene036069.t1 MTR_4g089135 53.846 130 60 0 10 139 15 144 6.11e-47 157
MS.gene036069.t1 MTR_5g012080 53.435 131 57 2 8 135 5 134 1.07e-46 156
MS.gene036069.t1 MTR_4g035590 51.034 145 66 2 8 149 6 148 1.70e-46 155
MS.gene036069.t1 MTR_5g076850 53.020 149 63 3 8 151 4 150 2.51e-46 160
MS.gene036069.t1 MTR_3g064580 59.231 130 49 2 8 135 4 131 6.38e-46 160
MS.gene036069.t1 MTR_8g076110 49.315 146 68 3 8 149 4 147 1.02e-45 152
MS.gene036069.t1 MTR_4g101680 52.672 131 57 2 8 135 5 133 1.04e-45 154
MS.gene036069.t1 MTR_5g041940 50.388 129 62 1 10 138 3 129 1.88e-45 150
MS.gene036069.t1 MTR_7g085220 47.887 142 67 1 9 143 7 148 2.87e-45 152
MS.gene036069.t1 MTR_3g088110 55.118 127 54 1 9 135 6 129 4.45e-45 150
MS.gene036069.t1 MTR_4g081870 48.120 133 67 1 6 138 5 135 7.82e-45 149
MS.gene036069.t1 MTR_1g096430 51.449 138 62 2 5 139 2 137 1.14e-44 150
MS.gene036069.t1 MTR_8g094580 53.968 126 55 1 10 135 7 129 1.67e-44 149
MS.gene036069.t1 MTR_2g062730 42.941 170 79 3 9 161 9 177 1.74e-44 150
MS.gene036069.t1 MTR_7g011120 52.846 123 56 1 13 135 11 131 3.80e-44 149
MS.gene036069.t1 MTR_2g093810 50.394 127 63 0 9 135 13 139 4.41e-44 149
MS.gene036069.t1 MTR_2157s0010 49.254 134 67 1 3 135 1 134 4.44e-44 147
MS.gene036069.t1 MTR_7g100990 51.587 126 61 0 10 135 11 136 6.83e-44 148
MS.gene036069.t1 MTR_3g096920 53.175 126 56 1 10 135 7 129 8.51e-44 147
MS.gene036069.t1 MTR_3g096920 54.331 127 53 2 10 135 7 129 2.24e-43 147
MS.gene036069.t1 MTR_8g024480 49.618 131 61 2 8 135 13 141 9.28e-43 148
MS.gene036069.t1 MTR_7g005280 52.381 126 57 1 10 135 15 137 2.01e-42 142
MS.gene036069.t1 MTR_5g014300 53.676 136 56 3 7 135 3 138 7.77e-42 143
MS.gene036069.t1 MTR_2g079990 51.773 141 58 3 1 135 3 139 8.60e-42 144
MS.gene036069.t1 MTR_4g098630 43.011 186 96 4 7 182 3 188 9.85e-42 142
MS.gene036069.t1 MTR_2g079990 51.773 141 58 3 1 135 3 139 1.73e-41 143
MS.gene036069.t1 MTR_8g059170 51.969 127 59 1 9 135 13 137 1.38e-40 140
MS.gene036069.t1 MTR_8g467490 47.581 124 65 0 12 135 16 139 3.40e-39 137
MS.gene036069.t1 MTR_5g040420 45.588 136 71 1 12 144 16 151 1.72e-38 135
MS.gene036069.t1 MTR_1g090720 49.618 131 58 3 9 135 41 167 2.10e-38 137
MS.gene036069.t1 MTR_3g070040 49.180 122 57 2 14 135 12 128 3.36e-38 134
MS.gene036069.t1 MTR_6g011860 46.825 126 66 1 10 135 15 139 1.80e-37 133
MS.gene036069.t1 MTR_0036s0150 50.758 132 60 3 12 140 7 136 4.99e-37 134
MS.gene036069.t1 MTR_3g093040 50.388 129 60 2 9 135 107 233 5.71e-37 130
MS.gene036069.t1 MTR_1g090723 48.905 137 65 3 12 145 10 144 1.16e-36 134
MS.gene036069.t1 MTR_1g090723 48.905 137 65 3 12 145 10 144 1.24e-36 134
MS.gene036069.t1 MTR_1g090723 48.905 137 65 3 12 145 10 144 1.31e-36 134
MS.gene036069.t1 MTR_4g134460 49.194 124 62 1 12 135 56 178 5.27e-36 130
MS.gene036069.t1 MTR_1g097300 49.606 127 60 2 12 136 21 145 6.35e-36 131
MS.gene036069.t1 MTR_5g069030 52.344 128 57 2 10 135 25 150 9.30e-36 131
MS.gene036069.t1 MTR_8g023840 48.872 133 64 3 10 139 11 142 1.04e-35 129
MS.gene036069.t1 MTR_3g093050 50.388 129 60 2 9 135 21 147 1.29e-35 131
MS.gene036069.t1 MTR_3g093050 50.388 129 60 2 9 135 21 147 1.55e-35 130
MS.gene036069.t1 MTR_5g090970 45.600 125 67 1 12 135 20 144 2.44e-35 125
MS.gene036069.t1 MTR_3g096140 46.825 126 63 2 12 135 9 132 5.30e-35 124
MS.gene036069.t1 MTR_2g086880 46.923 130 66 2 7 135 15 142 1.33e-34 128
MS.gene036069.t1 MTR_2g068920 43.972 141 76 2 12 149 23 163 2.41e-34 122
MS.gene036069.t1 MTR_3g096140 46.825 126 63 2 12 135 9 132 2.99e-34 124
MS.gene036069.t1 MTR_8g099750 40.876 137 79 1 3 139 7 141 6.82e-34 120
MS.gene036069.t1 MTR_2g086880 46.565 131 67 2 6 135 14 142 9.96e-34 125
MS.gene036069.t1 MTR_2g068880 43.262 141 77 2 12 149 24 164 1.19e-33 121
MS.gene036069.t1 MTR_5g090970 45.600 125 66 2 12 135 20 143 2.20e-33 120
MS.gene036069.t1 MTR_8g023860 44.361 133 70 3 10 139 12 143 3.58e-33 122
MS.gene036069.t1 MTR_8g063550 44.444 126 66 2 12 135 8 131 6.34e-33 120
MS.gene036069.t1 MTR_2g086690 45.255 137 66 4 11 140 5 139 6.68e-33 118
MS.gene036069.t1 MTR_3g098810 42.254 142 78 2 8 147 12 151 1.49e-32 115
MS.gene036069.t1 MTR_8g063550 44.531 128 67 2 10 135 6 131 1.55e-32 120
MS.gene036069.t1 MTR_8g063550 44.531 128 67 2 10 135 6 131 1.61e-32 121
MS.gene036069.t1 MTR_4g075980 44.094 127 66 2 12 135 17 141 4.38e-32 117
MS.gene036069.t1 MTR_8g023900 43.056 144 73 4 4 139 182 324 5.53e-32 120
MS.gene036069.t1 MTR_8g023900 41.353 133 74 3 10 139 12 143 2.87e-27 107
MS.gene036069.t1 MTR_3g098810 42.254 142 78 2 8 147 12 151 5.89e-32 115
MS.gene036069.t1 MTR_4g052620 40.845 142 77 4 10 146 5 144 5.59e-31 113
MS.gene036069.t1 MTR_8g093580 42.188 128 70 2 10 135 6 131 1.18e-29 114
MS.gene036069.t1 MTR_4g094302 40.476 126 67 1 10 135 11 128 9.04e-29 105
MS.gene036069.t1 MTR_4g094302 40.476 126 67 1 10 135 11 128 1.25e-28 105
MS.gene036069.t1 MTR_8g023930 43.411 129 69 3 10 135 24 151 1.69e-28 110
MS.gene036069.t1 MTR_7g105170 38.971 136 76 4 9 138 3 137 1.86e-28 106
MS.gene036069.t1 MTR_8g023880 38.667 150 72 5 5 137 2 148 4.45e-27 103
MS.gene036069.t1 MTR_3g096140 43.363 113 60 2 25 135 1 111 4.09e-26 102
MS.gene036069.t1 MTR_8g094580 59.155 71 26 1 65 135 8 75 6.15e-24 94.4
MS.gene036069.t1 MTR_7g070140 54.930 71 32 0 65 135 19 89 5.50e-23 89.4
MS.gene036069.t1 MTR_8g093790 38.760 129 61 5 7 135 7 117 7.19e-18 77.4
MS.gene036069.t1 MTR_7g083330 33.588 131 81 4 7 135 15 141 1.26e-17 77.0
MS.gene036069.t1 MTR_7g083370 35.211 142 76 5 1 135 1 133 4.09e-17 74.3
MS.gene036069.t1 MTR_7g083360 31.387 137 88 4 1 135 1 133 8.14e-17 73.9
MS.gene036069.t1 MTR_3g096400 31.783 129 80 3 8 135 5 126 1.09e-15 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036069.t1 AT4G28530 68.712 163 34 3 1 146 1 163 4.18e-74 227
MS.gene036069.t1 AT2G24430 59.843 127 51 0 9 135 15 141 1.55e-55 178
MS.gene036069.t1 AT2G24430 59.843 127 51 0 9 135 15 141 1.55e-55 178
MS.gene036069.t1 AT5G53950 61.111 126 49 0 10 135 17 142 3.67e-54 176
MS.gene036069.t1 AT1G76420 61.111 126 49 0 10 135 22 147 9.72e-54 174
MS.gene036069.t1 AT4G28530 62.044 137 36 2 1 121 1 137 2.81e-53 172
MS.gene036069.t1 AT3G15170 56.349 126 55 0 10 135 20 145 1.16e-51 168
MS.gene036069.t1 AT5G07680 59.524 126 49 1 10 135 3 126 2.37e-51 167
MS.gene036069.t1 AT5G07680 58.015 131 53 1 5 135 12 140 2.88e-51 167
MS.gene036069.t1 AT5G61430 58.730 126 50 1 10 135 16 139 3.47e-51 167
MS.gene036069.t1 AT5G66300 52.980 151 64 3 4 149 6 154 4.06e-51 166
MS.gene036069.t1 AT3G29035 59.524 126 49 1 10 135 24 147 1.02e-50 166
MS.gene036069.t1 AT3G04070 51.020 147 69 1 1 144 1 147 1.56e-50 166
MS.gene036069.t1 AT3G04070 51.020 147 69 1 1 144 1 147 2.72e-50 166
MS.gene036069.t1 AT3G12977 56.923 130 54 1 6 135 14 141 3.59e-50 163
MS.gene036069.t1 AT5G39610 58.730 126 50 1 10 135 20 143 5.77e-50 163
MS.gene036069.t1 AT1G56010 58.015 131 52 2 6 135 15 143 3.36e-49 162
MS.gene036069.t1 AT3G18400 55.118 127 55 1 9 135 4 128 3.98e-49 161
MS.gene036069.t1 AT5G18270 58.730 126 51 1 10 135 21 145 3.50e-48 160
MS.gene036069.t1 AT5G18270 58.730 126 51 1 10 135 21 145 3.82e-48 159
MS.gene036069.t1 AT4G36160 54.478 134 56 2 5 135 9 140 9.27e-48 160
MS.gene036069.t1 AT4G36160 54.478 134 56 2 5 135 5 136 1.07e-47 159
MS.gene036069.t1 AT4G36160 54.478 134 56 2 5 135 5 136 1.07e-47 159
MS.gene036069.t1 AT3G17730 56.250 128 52 2 10 135 6 131 1.40e-47 155
MS.gene036069.t1 AT2G18060 54.545 132 55 2 7 135 6 135 2.93e-47 158
MS.gene036069.t1 AT2G18060 54.545 132 55 2 7 135 6 135 2.93e-47 158
MS.gene036069.t1 AT1G12260 53.488 129 55 2 10 135 7 133 3.81e-47 157
MS.gene036069.t1 AT1G33280 51.724 145 65 2 8 149 6 148 4.16e-47 156
MS.gene036069.t1 AT1G12260 52.672 131 57 2 8 135 5 133 5.99e-47 158
MS.gene036069.t1 AT3G04060 57.143 126 53 1 10 135 20 144 6.97e-47 156
MS.gene036069.t1 AT1G62700 52.672 131 57 2 8 135 5 133 1.70e-46 157
MS.gene036069.t1 AT1G62700 52.672 131 57 2 8 135 5 133 1.70e-46 157
MS.gene036069.t1 AT1G61110 54.348 138 59 2 1 135 4 140 3.55e-46 154
MS.gene036069.t1 AT5G17260 55.385 130 54 2 8 135 4 131 7.93e-46 157
MS.gene036069.t1 AT3G03200 56.923 130 52 2 8 135 4 131 9.35e-46 157
MS.gene036069.t1 AT4G10350 53.623 138 58 3 1 135 1 135 1.57e-45 153
MS.gene036069.t1 AT1G71930 49.324 148 69 3 6 149 5 150 3.17e-45 152
MS.gene036069.t1 AT1G71930 49.324 148 69 3 6 149 5 150 3.17e-45 152
MS.gene036069.t1 AT1G54330 52.414 145 65 2 9 151 5 147 3.31e-45 151
MS.gene036069.t1 AT1G65910 53.061 147 60 4 8 151 4 144 1.10e-44 156
MS.gene036069.t1 AT3G61910 51.908 131 58 2 8 135 9 137 1.70e-44 150
MS.gene036069.t1 AT1G01720 53.968 126 55 1 10 135 7 129 2.76e-44 148
MS.gene036069.t1 AT5G08790 53.543 127 56 1 9 135 6 129 1.05e-43 147
MS.gene036069.t1 AT5G62380 51.908 131 58 2 8 135 5 133 1.36e-43 148
MS.gene036069.t1 AT5G62380 51.908 131 58 2 8 135 5 133 1.36e-43 148
MS.gene036069.t1 AT1G69490 50.000 128 62 1 8 135 7 132 1.54e-43 146
MS.gene036069.t1 AT1G77450 52.672 131 57 2 7 135 5 132 4.45e-43 144
MS.gene036069.t1 AT5G63790 53.543 127 56 1 9 135 49 172 5.54e-43 145
MS.gene036069.t1 AT5G63790 53.543 127 56 1 9 135 59 182 7.38e-43 145
MS.gene036069.t1 AT2G46770 48.855 131 62 2 8 135 14 142 9.02e-43 146
MS.gene036069.t1 AT3G15510 48.921 139 67 1 14 148 21 159 9.11e-43 146
MS.gene036069.t1 AT1G79580 51.538 130 59 2 9 135 16 144 1.65e-42 146
MS.gene036069.t1 AT1G79580 51.538 130 59 2 9 135 16 144 1.65e-42 146
MS.gene036069.t1 AT1G79580 51.538 130 59 2 9 135 16 144 1.65e-42 146
MS.gene036069.t1 AT1G79580 51.538 130 59 2 9 135 16 144 1.65e-42 146
MS.gene036069.t1 AT1G79580 51.538 130 59 2 9 135 16 144 1.65e-42 146
MS.gene036069.t1 AT5G46590 50.382 131 62 2 7 135 3 132 3.26e-42 143
MS.gene036069.t1 AT1G32770 48.092 131 63 2 8 135 14 142 3.56e-42 145
MS.gene036069.t1 AT5G46590 50.382 131 62 2 7 135 3 132 3.63e-42 143
MS.gene036069.t1 AT4G17980 51.908 131 61 1 7 135 3 133 4.46e-42 142
MS.gene036069.t1 AT3G15500 50.704 142 64 2 1 138 1 140 5.36e-42 143
MS.gene036069.t1 AT4G17980 51.908 131 61 1 7 135 3 133 7.62e-42 142
MS.gene036069.t1 AT1G52890 53.077 130 59 1 9 138 13 140 8.96e-42 142
MS.gene036069.t1 AT4G27410 47.742 155 71 3 1 147 1 153 1.69e-41 141
MS.gene036069.t1 AT3G10490 48.201 139 68 2 2 138 19 155 1.89e-41 139
MS.gene036069.t1 AT1G33060 55.814 129 53 2 9 135 23 149 3.10e-41 147
MS.gene036069.t1 AT1G33060 55.814 129 53 2 9 135 23 149 3.31e-41 147
MS.gene036069.t1 AT4G35580 56.589 129 52 2 9 135 8 134 7.19e-41 144
MS.gene036069.t1 AT4G35580 56.589 129 52 2 9 135 8 134 8.82e-41 144
MS.gene036069.t1 AT4G35580 56.589 129 52 2 9 135 8 134 9.20e-41 144
MS.gene036069.t1 AT3G10480 51.145 131 60 2 7 135 24 152 1.63e-40 142
MS.gene036069.t1 AT3G10480 51.145 131 60 2 7 135 24 152 1.70e-40 142
MS.gene036069.t1 AT3G10500 50.000 134 63 2 9 140 8 139 2.88e-40 143
MS.gene036069.t1 AT3G10490 49.265 136 65 2 2 135 19 152 4.06e-40 141
MS.gene036069.t1 AT1G32510 50.000 140 57 3 6 135 2 138 4.08e-40 137
MS.gene036069.t1 AT5G04410 51.163 129 59 2 9 135 8 134 6.51e-40 142
MS.gene036069.t1 AT5G39820 46.774 124 66 0 12 135 22 145 1.93e-39 137
MS.gene036069.t1 AT5G24590 53.846 130 57 2 8 135 11 139 3.01e-39 139
MS.gene036069.t1 AT5G13180 49.206 126 61 1 10 135 14 136 1.49e-38 132
MS.gene036069.t1 AT1G26870 46.032 126 68 0 10 135 16 141 1.18e-37 134
MS.gene036069.t1 AT2G33480 49.206 126 59 2 10 135 15 135 1.31e-37 130
MS.gene036069.t1 AT2G33480 49.206 126 59 2 10 135 15 135 1.35e-37 130
MS.gene036069.t1 AT3G49530 49.612 129 62 2 9 135 12 139 2.96e-37 133
MS.gene036069.t1 AT4G27410 43.605 172 70 5 1 147 1 170 3.19e-37 130
MS.gene036069.t1 AT3G49530 49.612 129 62 2 9 135 12 139 5.75e-37 133
MS.gene036069.t1 AT2G43000 46.774 124 64 1 12 135 20 141 6.67e-37 129
MS.gene036069.t1 AT2G02450 48.387 124 63 1 12 135 53 175 2.43e-36 130
MS.gene036069.t1 AT2G02450 48.387 124 63 1 12 135 53 175 4.14e-36 130
MS.gene036069.t1 AT1G34180 43.165 139 75 2 12 148 18 154 5.21e-36 130
MS.gene036069.t1 AT2G27300 47.287 129 65 2 8 135 12 138 9.43e-36 127
MS.gene036069.t1 AT1G34180 43.165 139 75 2 12 148 18 154 1.30e-35 130
MS.gene036069.t1 AT1G52880 48.201 139 67 3 14 148 21 158 1.65e-35 126
MS.gene036069.t1 AT3G10480 41.463 164 59 3 7 135 24 185 1.03e-34 128
MS.gene036069.t1 AT1G34190 45.669 127 65 2 12 136 18 142 1.57e-34 127
MS.gene036069.t1 AT1G34180 39.735 151 75 2 12 148 18 166 6.05e-34 125
MS.gene036069.t1 AT1G34180 39.735 151 75 2 12 148 18 166 1.47e-33 125
MS.gene036069.t1 AT5G09330 46.094 128 65 2 10 135 6 131 2.47e-33 124
MS.gene036069.t1 AT5G09330 46.094 128 65 2 10 135 6 131 2.47e-33 124
MS.gene036069.t1 AT5G09330 46.094 128 65 2 10 135 6 131 2.47e-33 124
MS.gene036069.t1 AT5G09330 46.094 128 65 2 10 135 6 131 2.47e-33 124
MS.gene036069.t1 AT5G09330 46.094 128 65 2 10 135 6 131 2.47e-33 124
MS.gene036069.t1 AT1G32870 46.259 147 73 3 1 145 1 143 6.90e-33 123
MS.gene036069.t1 AT1G32870 46.259 147 73 3 1 145 1 143 7.22e-33 122
MS.gene036069.t1 AT5G04395 42.282 149 72 2 1 135 19 167 8.20e-33 116
MS.gene036069.t1 AT2G17040 44.000 125 69 1 12 135 8 132 9.17e-33 118
MS.gene036069.t1 AT1G32870 46.259 147 73 3 1 145 37 179 1.23e-32 122
MS.gene036069.t1 AT3G44290 42.969 128 70 2 12 138 16 141 1.29e-31 114
MS.gene036069.t1 AT5G22290 41.304 138 73 3 4 135 10 145 6.16e-31 115
MS.gene036069.t1 AT3G44290 42.969 128 70 2 12 138 16 141 6.27e-31 115
MS.gene036069.t1 AT3G12977 62.963 81 28 1 55 135 10 88 7.14e-31 112
MS.gene036069.t1 AT3G12910 47.244 127 63 3 12 135 23 148 1.91e-30 113
MS.gene036069.t1 AT1G56010 65.385 78 25 1 58 135 1 76 4.10e-30 111
MS.gene036069.t1 AT5G61430 62.821 78 27 1 58 135 1 76 1.21e-29 110
MS.gene036069.t1 AT5G64060 40.310 129 73 2 9 135 5 131 7.70e-29 110
MS.gene036069.t1 AT3G44350 40.845 142 78 3 6 142 1 141 1.84e-28 104
MS.gene036069.t1 AT3G44350 40.845 142 78 3 6 142 1 141 7.09e-28 105
MS.gene036069.t1 AT4G10350 58.333 84 30 2 55 135 7 88 3.28e-27 104
MS.gene036069.t1 AT5G22380 40.299 134 73 3 13 140 8 140 6.81e-27 102
MS.gene036069.t1 AT4G01550 40.945 127 71 3 13 135 7 133 3.83e-26 103
MS.gene036069.t1 AT5G64530 37.500 128 68 2 9 136 2 117 4.55e-26 98.2
MS.gene036069.t1 AT5G64530 37.500 128 68 2 9 136 2 117 6.67e-26 98.6
MS.gene036069.t1 AT1G02230 41.538 130 68 5 11 135 4 130 2.90e-24 97.8
MS.gene036069.t1 AT4G01520 36.923 130 77 4 11 135 5 134 2.80e-23 94.4
MS.gene036069.t1 AT3G04420 34.586 133 81 3 11 139 4 134 1.96e-22 91.7
MS.gene036069.t1 AT3G04420 34.586 133 81 3 11 139 4 134 3.28e-22 92.0
MS.gene036069.t1 AT4G01540 36.719 128 76 4 13 135 7 134 5.19e-22 92.0
MS.gene036069.t1 AT4G01540 36.719 128 76 4 13 135 7 134 5.24e-22 92.4
MS.gene036069.t1 AT4G01540 36.719 128 76 4 13 135 7 134 5.44e-22 92.0
MS.gene036069.t1 AT4G01540 36.719 128 76 4 13 135 7 134 6.41e-22 91.7
MS.gene036069.t1 AT2G33480 54.167 72 31 1 64 135 9 78 6.97e-21 85.9
MS.gene036069.t1 AT1G02220 32.558 129 78 4 11 135 4 127 4.12e-18 81.3
MS.gene036069.t1 AT1G02250 35.714 140 78 5 11 141 4 140 1.11e-17 79.7
MS.gene036069.t1 AT1G01010 38.806 134 68 6 13 135 6 136 1.54e-17 79.7
MS.gene036069.t1 AT3G04430 37.313 134 70 5 16 137 6 137 1.67e-17 76.6
MS.gene036069.t1 AT5G14000 30.405 148 97 3 7 152 12 155 2.44e-15 70.1
MS.gene036069.t1 AT5G50820 35.252 139 66 6 10 139 17 140 2.51e-15 70.9
MS.gene036069.t1 AT3G10490 58.491 53 20 1 83 135 2 52 3.10e-15 72.8
MS.gene036069.t1 AT3G10490 58.491 53 20 1 83 135 2 52 3.10e-15 72.8
MS.gene036069.t1 AT3G56530 28.462 130 88 3 9 135 51 178 5.15e-15 72.0
MS.gene036069.t1 AT2G18060 60.417 48 17 1 88 135 2 47 9.26e-15 70.9
MS.gene036069.t1 AT5G14000 31.298 131 84 3 7 135 12 138 4.93e-14 67.8
MS.gene036069.t1 AT2G43000 49.231 65 31 1 71 135 1 63 5.93e-14 67.4
MS.gene036069.t1 AT5G18300 34.109 129 69 5 14 138 18 134 2.84e-12 61.6
MS.gene036069.t1 AT5G22290 57.447 47 18 1 89 135 2 46 9.88e-11 59.3

Find 46 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAGATGTTGTTGCCCTAT+TGG 0.241618 1.1:-51869784 None:intergenic
CCATATCCATCATCACATTT+AGG 0.299554 1.1:-51871103 None:intergenic
ACCAATAGGGCAACAACATC+TGG 0.310609 1.1:+51869783 MS.gene036069:CDS
CCTAAATGTGATGATGGATA+TGG 0.311726 1.1:+51871103 MS.gene036069:CDS
TAAAACCTGTGGCATATTTA+CGG 0.326045 1.1:-51869758 None:intergenic
TGCGAGCCTTGGCAACTTCC+TGG 0.343644 1.1:+51867832 MS.gene036069:CDS
GTTGGATCATGCATGAGTTT+AGG 0.344473 1.1:+51869925 MS.gene036069:CDS
GGAAAACTCTAGTGTTCTAT+AGG 0.402144 1.1:+51869874 MS.gene036069:CDS
CCTACAACCTCATGTGTGAT+TGG 0.419579 1.1:-51869846 None:intergenic
GCTCCAAATGGAATCAAAAC+AGG 0.425014 1.1:+51869903 MS.gene036069:CDS
GGGCAACAACATCTGGGTAT+TGG 0.439791 1.1:+51869790 MS.gene036069:CDS
CCAATCACACATGAGGTTGT+AGG 0.470021 1.1:+51869846 MS.gene036069:CDS
TCTGGGTATTGGAAAGCAAC+AGG 0.476335 1.1:+51869801 MS.gene036069:CDS
ATTAGTCCTAAATGTGATGA+TGG 0.485409 1.1:+51871097 MS.gene036069:CDS
CTAGGATAAAATCGAAAGCC+AGG 0.494510 1.1:-51867718 None:intergenic
CACAAATGAGGATGTTCTCA+AGG 0.510472 1.1:+51867780 MS.gene036069:CDS
CGTGACCGTAAATATGCCAC+AGG 0.515429 1.1:+51869753 MS.gene036069:CDS
ACTTGCATACATGCGAGCCT+TGG 0.522819 1.1:+51867821 MS.gene036069:CDS
TTATCCTAGTGATGAAGAGT+TGG 0.524957 1.1:+51867732 MS.gene036069:CDS
CTAAACTCAACGCAACTGAA+TGG 0.538893 1.1:+51869715 MS.gene036069:CDS
TATAGGAATAGAGCTCCAAA+TGG 0.544085 1.1:+51869891 MS.gene036069:CDS
GGATGTTCTCAAGGGTACCT+TGG 0.551085 1.1:+51867789 MS.gene036069:CDS
TGTTCTCAAGGGTACCTTGG+AGG 0.553598 1.1:+51867792 MS.gene036069:CDS
CACATGAGGTTGTAGGAATG+AGG 0.561923 1.1:+51869853 MS.gene036069:CDS
CTAAATGTGATGATGGATAT+GGG 0.563079 1.1:+51871104 MS.gene036069:CDS
CAAATGGAATCAAAACAGGT+TGG 0.568983 1.1:+51869907 MS.gene036069:CDS
ATCATGGGTCTTAGAGATGT+CGG 0.583109 1.1:+51867682 None:intergenic
AGGACCAACTCTTCATCACT+AGG 0.594537 1.1:-51867736 None:intergenic
CATGGAAGGAATGAGATTCG+AGG 0.594984 1.1:+51871180 MS.gene036069:CDS
CCAATAGGGCAACAACATCT+GGG 0.597019 1.1:+51869784 MS.gene036069:CDS
TATATACCAGGAAGTTGCCA+AGG 0.602199 1.1:-51867838 None:intergenic
TAGGATAAAATCGAAAGCCA+GGG 0.604860 1.1:-51867717 None:intergenic
CATTCCTTCCATGTCTGATG+AGG 0.604861 1.1:-51871170 None:intergenic
ATGCAAGTCAATTTCCTCCA+AGG 0.605909 1.1:-51867806 None:intergenic
CCTATTGGTTCTAAAACCTG+TGG 0.612834 1.1:-51869769 None:intergenic
CGAGGTTGATAATAATAGCA+TGG 0.613330 1.1:+51871198 MS.gene036069:CDS
AGCAACAGGAAAGGATCGAA+CGG 0.629108 1.1:+51869815 MS.gene036069:CDS
TGGTGTGGCCTCATCAGACA+TGG 0.638421 1.1:+51871162 MS.gene036069:CDS
GTTTGATCCAATCACACATG+AGG 0.642011 1.1:+51869839 MS.gene036069:CDS
GTGGCCTCATCAGACATGGA+AGG 0.645880 1.1:+51871166 MS.gene036069:CDS
ACAAATGAGGATGTTCTCAA+GGG 0.646017 1.1:+51867781 MS.gene036069:CDS
GTATTGGAAAGCAACAGGAA+AGG 0.658210 1.1:+51869806 MS.gene036069:CDS
GATTTGGAAGATCATCATGA+TGG 0.674805 1.1:+51871142 MS.gene036069:CDS
GGAAGATCATCATGATGGTG+TGG 0.675111 1.1:+51871147 MS.gene036069:CDS
AGGATAAAATCGAAAGCCAG+GGG 0.675897 1.1:-51867716 None:intergenic
GGATAAAATCGAAAGCCAGG+GGG 0.720221 1.1:-51867715 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAATTATTTAT+TGG - chr1.1:51868326-51868345 None:intergenic 0.0%
!!! AATAATTTTTTTATATAATA+TGG + chr1.1:51868329-51868348 MS.gene036069:intron 0.0%
!! AATAAAATAAAAGAGAAAAT+TGG + chr1.1:51868198-51868217 MS.gene036069:intron 10.0%
!! TTAGGTATAAATAAAAAAAT+TGG + chr1.1:51870200-51870219 MS.gene036069:intron 10.0%
!! AAAAAAATTATCGTTATTGA+TGG + chr1.1:51869026-51869045 MS.gene036069:intron 15.0%
!! AAAGAAGAAGAAATAATTAA+AGG + chr1.1:51868122-51868141 MS.gene036069:intron 15.0%
!! CAATAATGACAAAAATAATT+TGG - chr1.1:51869501-51869520 None:intergenic 15.0%
!! TAAATCTCTTAATTAAGATT+TGG - chr1.1:51870658-51870677 None:intergenic 15.0%
!! TCAACTCATAAATAAATATA+AGG - chr1.1:51868055-51868074 None:intergenic 15.0%
!! TGATAAATATAATATATACC+AGG - chr1.1:51867853-51867872 None:intergenic 15.0%
!! TTAACCAAAGAATTAATATA+TGG - chr1.1:51867946-51867965 None:intergenic 15.0%
!! TTAACCATATATTAATTCTT+TGG + chr1.1:51867939-51867958 MS.gene036069:intron 15.0%
!!! AATTCATCAAAGAATTATTT+TGG - chr1.1:51871027-51871046 None:intergenic 15.0%
!!! ATTTAAAGTGTATACAAAAT+AGG + chr1.1:51868931-51868950 MS.gene036069:intron 15.0%
!!! CTTTAAAAATCTAGTTATTT+TGG + chr1.1:51870769-51870788 MS.gene036069:intron 15.0%
!!! GTTTTTTTTTTTTTATTCAG+AGG + chr1.1:51869689-51869708 MS.gene036069:intron 15.0%
!!! TGTTTTAATGTTTTTTGAAA+TGG - chr1.1:51870410-51870429 None:intergenic 15.0%
!!! TTATATGTGTAGTTTTTATT+AGG + chr1.1:51870182-51870201 MS.gene036069:intron 15.0%
!! ACAAAAGCAATTATGTAAAA+CGG - chr1.1:51868370-51868389 None:intergenic 20.0%
!! AGAATAGAATATTTCATAAG+TGG + chr1.1:51870702-51870721 MS.gene036069:intron 20.0%
!! ATAAAAGAGAAAATTGGTTA+TGG + chr1.1:51868204-51868223 MS.gene036069:intron 20.0%
!! ATAGAGATCATAATATTGTT+TGG - chr1.1:51868441-51868460 None:intergenic 20.0%
!! ATTAATCAAATGAAAGTGAA+AGG - chr1.1:51868563-51868582 None:intergenic 20.0%
!! TAAAAGAGAAAATTGGTTAT+GGG + chr1.1:51868205-51868224 MS.gene036069:intron 20.0%
!! TAACATGAAAAATTGCTTAT+TGG - chr1.1:51869260-51869279 None:intergenic 20.0%
!! TACAACATCATTAATTAACT+TGG + chr1.1:51867989-51868008 MS.gene036069:intron 20.0%
!! TAGAGATCATAATATTGTTT+GGG - chr1.1:51868440-51868459 None:intergenic 20.0%
!! TTACAAAAAAATCACAAATG+AGG + chr1.1:51867768-51867787 MS.gene036069:CDS 20.0%
!! TTATGTTACAATTTATGACA+AGG - chr1.1:51868796-51868815 None:intergenic 20.0%
!!! AAAGTTTCCTTCTTTTAAAA+AGG - chr1.1:51868095-51868114 None:intergenic 20.0%
!!! ATATTTGCCTTTTTAAAAGA+AGG + chr1.1:51868085-51868104 MS.gene036069:intron 20.0%
!!! ATTAATCAAACATTAGCTTA+TGG + chr1.1:51869188-51869207 MS.gene036069:intron 20.0%
!!! CATTTGTGATTTTTTTGTAA+AGG - chr1.1:51867768-51867787 None:intergenic 20.0%
!!! GAATTTTCTTCAATTTTCTA+AGG + chr1.1:51871042-51871061 MS.gene036069:intron 20.0%
!!! GTATATTTTGTAGACTTTAA+TGG - chr1.1:51868994-51869013 None:intergenic 20.0%
!!! TTTTTAAAAGAAGGAAACTT+TGG + chr1.1:51868094-51868113 MS.gene036069:intron 20.0%
!!! TTTTTTTAATAAACTTGACG+TGG + chr1.1:51870517-51870536 MS.gene036069:intron 20.0%
!!! TTTTTTTGTAAAGGTAATGA+AGG - chr1.1:51867759-51867778 None:intergenic 20.0%
!!! TTTTTTTTTTTATTCAGAGG+TGG + chr1.1:51869692-51869711 MS.gene036069:intron 20.0%
! AAAAGAGAAAATTGGTTATG+GGG + chr1.1:51868206-51868225 MS.gene036069:intron 25.0%
! AAGATAAAATATCTCCATCA+AGG - chr1.1:51870347-51870366 None:intergenic 25.0%
! ACGTTTGAAAATTGATTGAA+AGG - chr1.1:51870004-51870023 None:intergenic 25.0%
! ACTGAAAAATACAAAGAGAA+CGG + chr1.1:51869313-51869332 MS.gene036069:intron 25.0%
! AGTAAAAATAAACGTACCTT+AGG - chr1.1:51869972-51869991 None:intergenic 25.0%
! ATACACTATCAAAGCAAAAT+AGG + chr1.1:51868907-51868926 MS.gene036069:intron 25.0%
! ATATAGACTTAAATACATGC+AGG - chr1.1:51868657-51868676 None:intergenic 25.0%
! ATGTAATTGCCACATAATAA+AGG + chr1.1:51870111-51870130 MS.gene036069:intron 25.0%
! TCAATGATTAAGGCTATTAA+TGG + chr1.1:51868271-51868290 MS.gene036069:intron 25.0%
! TGTAATTGCCACATAATAAA+GGG + chr1.1:51870112-51870131 MS.gene036069:intron 25.0%
! TTAAAATAAGGTGAGAAAGT+TGG + chr1.1:51870564-51870583 MS.gene036069:intron 25.0%
! TTACAATTTATGACAAGGTA+TGG - chr1.1:51868791-51868810 None:intergenic 25.0%
!! AAACTCCTCTTTTTGTAAAT+GGG + chr1.1:51869285-51869304 MS.gene036069:intron 25.0%
!! AAATGATTCTCACGTATTTT+AGG + chr1.1:51870730-51870749 MS.gene036069:intron 25.0%
!! AGAGCTAGCTATTTAAAATA+AGG + chr1.1:51870552-51870571 MS.gene036069:intron 25.0%
!! ATCGTTATTGATGGTAAAAT+TGG + chr1.1:51869035-51869054 MS.gene036069:intron 25.0%
!! ATCTTTCACACAAATGTTTT+GGG + chr1.1:51868715-51868734 MS.gene036069:intron 25.0%
!! ATTGTTGTCATTGATTGAAT+TGG + chr1.1:51870677-51870696 MS.gene036069:intron 25.0%
!! TCTTTTGTGAATGATAATTG+AGG + chr1.1:51868759-51868778 MS.gene036069:intron 25.0%
!! TTGTGTAGAGTATTTCATAA+AGG + chr1.1:51870851-51870870 MS.gene036069:intron 25.0%
!! TTTTCTTTATGCGGTTAAAA+CGG + chr1.1:51868499-51868518 MS.gene036069:intron 25.0%
!!! TTCAAACTTTTGTTGATTAC+AGG + chr1.1:51870817-51870836 MS.gene036069:intron 25.0%
AAAAATAAACGTACCTTAGG+TGG - chr1.1:51869969-51869988 None:intergenic 30.0%
AAGATGAGAAAGAAGCAAAT+TGG - chr1.1:51870970-51870989 None:intergenic 30.0%
AATTGACATTCACAAACACA+TGG + chr1.1:51867964-51867983 MS.gene036069:intron 30.0%
AGAAAGTCGTCATACAAAAT+AGG + chr1.1:51868872-51868891 MS.gene036069:intron 30.0%
ATAGTCTCATACATTTCTTG+TGG - chr1.1:51870905-51870924 None:intergenic 30.0%
ATTAGTCCTAAATGTGATGA+TGG + chr1.1:51871097-51871116 MS.gene036069:CDS 30.0%
CATGCATGAATAGAGATAAT+AGG - chr1.1:51869660-51869679 None:intergenic 30.0%
CATTTCTTGTGGACTTAATT+TGG - chr1.1:51870894-51870913 None:intergenic 30.0%
CTCATTTAAATGACAATGGT+GGG - chr1.1:51871002-51871021 None:intergenic 30.0%
GAACTACTATTATACCTTGA+TGG + chr1.1:51870330-51870349 MS.gene036069:intron 30.0%
GGTTCTCATTTAAATGACAA+TGG - chr1.1:51871006-51871025 None:intergenic 30.0%
GTGAAAGATCAAATGTTGTA+TGG - chr1.1:51868704-51868723 None:intergenic 30.0%
GTTCAGTTCTTCAATGATTA+AGG + chr1.1:51868261-51868280 MS.gene036069:intron 30.0%
TAAAACCTGTGGCATATTTA+CGG - chr1.1:51869761-51869780 None:intergenic 30.0%
TATGGAAAAACATGTGACTT+AGG - chr1.1:51869621-51869640 None:intergenic 30.0%
TCTCATTTAAATGACAATGG+TGG - chr1.1:51871003-51871022 None:intergenic 30.0%
! AACTCCTCTTTTTGTAAATG+GGG + chr1.1:51869286-51869305 MS.gene036069:intron 30.0%
! AAGATTTCAACTTGCTTCTT+AGG - chr1.1:51870229-51870248 None:intergenic 30.0%
! AAGTCACATGTTTTTCCATA+TGG + chr1.1:51869621-51869640 MS.gene036069:intron 30.0%
! CAAACTCCTCTTTTTGTAAA+TGG + chr1.1:51869284-51869303 MS.gene036069:intron 30.0%
! GATCTTTCACACAAATGTTT+TGG + chr1.1:51868714-51868733 MS.gene036069:intron 30.0%
! TTTTCAAACGTGACAATGAT+AGG + chr1.1:51870013-51870032 MS.gene036069:intron 30.0%
!! CTAAATGTGATGATGGATAT+GGG + chr1.1:51871104-51871123 MS.gene036069:CDS 30.0%
!! CTCTAGGTATTTTACTTTTG+TGG + chr1.1:51868525-51868544 MS.gene036069:intron 30.0%
!! TCTTCTTGCTTTTCTTTATG+CGG + chr1.1:51868490-51868509 MS.gene036069:intron 30.0%
!! TTTCAAGTTTCCAATTGAGA+CGG - chr1.1:51869409-51869428 None:intergenic 30.0%
!!! ACCTAAGCATGTTATTTTTG+GGG - chr1.1:51869378-51869397 None:intergenic 30.0%
!!! GACCTAAGCATGTTATTTTT+GGG - chr1.1:51869379-51869398 None:intergenic 30.0%
!!! GGTCAATTTTTAGTACCATA+TGG - chr1.1:51869639-51869658 None:intergenic 30.0%
!!! TGACCTAAGCATGTTATTTT+TGG - chr1.1:51869380-51869399 None:intergenic 30.0%
!!! TTAGCATCTTTTTGAGATAG+AGG + chr1.1:51870601-51870620 MS.gene036069:intron 30.0%
AAATAAGGTGAGAAAGTTGG+AGG + chr1.1:51870567-51870586 MS.gene036069:intron 35.0%
AATGTCCATTTAGTAGTGTG+AGG + chr1.1:51870272-51870291 MS.gene036069:intron 35.0%
ACAAATGAGGATGTTCTCAA+GGG + chr1.1:51867781-51867800 MS.gene036069:CDS 35.0%
ACCCCAAAAATAACATGCTT+AGG + chr1.1:51869374-51869393 MS.gene036069:intron 35.0%
AGGAAAACAATGTGTATGTG+AGG + chr1.1:51870621-51870640 MS.gene036069:intron 35.0%
ATCACACTCCCTTTATTATG+TGG - chr1.1:51870123-51870142 None:intergenic 35.0%
ATTAAACCCTCACAAACCAT+AGG - chr1.1:51870150-51870169 None:intergenic 35.0%
CAAATGGAATCAAAACAGGT+TGG + chr1.1:51869907-51869926 MS.gene036069:CDS 35.0%
CCATATCCATCATCACATTT+AGG - chr1.1:51871106-51871125 None:intergenic 35.0%
GAAAAACATGTGACTTAGGT+AGG - chr1.1:51869617-51869636 None:intergenic 35.0%
GACTTAGGTAGGTAAAACAA+GGG - chr1.1:51869606-51869625 None:intergenic 35.0%
GATTTGGAAGATCATCATGA+TGG + chr1.1:51871142-51871161 MS.gene036069:CDS 35.0%
GGAAAACTCTAGTGTTCTAT+AGG + chr1.1:51869874-51869893 MS.gene036069:CDS 35.0%
TACGGCAGAAAAAAACAACT+AGG - chr1.1:51868410-51868429 None:intergenic 35.0%
TAGGATAAAATCGAAAGCCA+GGG - chr1.1:51867720-51867739 None:intergenic 35.0%
TATAGGAATAGAGCTCCAAA+TGG + chr1.1:51869891-51869910 MS.gene036069:CDS 35.0%
TGACTTAGGTAGGTAAAACA+AGG - chr1.1:51869607-51869626 None:intergenic 35.0%
TGCTTTGCGAATATTCTGTA+AGG + chr1.1:51869110-51869129 MS.gene036069:intron 35.0%
TTATCCTAGTGATGAAGAGT+TGG + chr1.1:51867732-51867751 MS.gene036069:CDS 35.0%
TTCACCCCATTTACAAAAAG+AGG - chr1.1:51869293-51869312 None:intergenic 35.0%
! TTGTTGATTACAGGAAGACT+GGG + chr1.1:51870826-51870845 MS.gene036069:intron 35.0%
! TTTGTTGATTACAGGAAGAC+TGG + chr1.1:51870825-51870844 MS.gene036069:intron 35.0%
!! CCTAAATGTGATGATGGATA+TGG + chr1.1:51871103-51871122 MS.gene036069:CDS 35.0%
!! CGAGGTTGATAATAATAGCA+TGG + chr1.1:51871198-51871217 MS.gene036069:CDS 35.0%
!! TGATGGATATGGGTTTTTGT+GGG + chr1.1:51871114-51871133 MS.gene036069:CDS 35.0%
!!! ATGATGGATATGGGTTTTTG+TGG + chr1.1:51871113-51871132 MS.gene036069:CDS 35.0%
!!! CAACCTGTTTTGATTCCATT+TGG - chr1.1:51869909-51869928 None:intergenic 35.0%
!!! CACAGGTTTTAGAACCAATA+GGG + chr1.1:51869770-51869789 MS.gene036069:CDS 35.0%
!!! TGTGTATGTGAGGACTTTTT+TGG + chr1.1:51870631-51870650 MS.gene036069:intron 35.0%
AGGATAAAATCGAAAGCCAG+GGG - chr1.1:51867719-51867738 None:intergenic 40.0%
ATGCAAGTCAATTTCCTCCA+AGG - chr1.1:51867809-51867828 None:intergenic 40.0%
CACAAATGAGGATGTTCTCA+AGG + chr1.1:51867780-51867799 MS.gene036069:CDS 40.0%
CTAAACTCAACGCAACTGAA+TGG + chr1.1:51869715-51869734 MS.gene036069:CDS 40.0%
CTAGGATAAAATCGAAAGCC+AGG - chr1.1:51867721-51867740 None:intergenic 40.0%
GATCATGCATGAGTTTAGGT+TGG + chr1.1:51869929-51869948 MS.gene036069:intron 40.0%
GCAAATTGGTTGTACCCAAT+TGG - chr1.1:51870956-51870975 None:intergenic 40.0%
GCTCCAAATGGAATCAAAAC+AGG + chr1.1:51869903-51869922 MS.gene036069:CDS 40.0%
GTATTGGAAAGCAACAGGAA+AGG + chr1.1:51869806-51869825 MS.gene036069:CDS 40.0%
GTTGGATCATGCATGAGTTT+AGG + chr1.1:51869925-51869944 MS.gene036069:CDS 40.0%
GTTTGATCCAATCACACATG+AGG + chr1.1:51869839-51869858 MS.gene036069:CDS 40.0%
TATATACCAGGAAGTTGCCA+AGG - chr1.1:51867841-51867860 None:intergenic 40.0%
TGGATCCTCACACTACTAAA+TGG - chr1.1:51870280-51870299 None:intergenic 40.0%
! ATATGGGTTTTTGTGGGACA+TGG + chr1.1:51871120-51871139 MS.gene036069:CDS 40.0%
! ATGAAGCCTATGGTTTGTGA+GGG + chr1.1:51870141-51870160 MS.gene036069:intron 40.0%
! GTCACTTTATCCGTCTCAAT+TGG + chr1.1:51869396-51869415 MS.gene036069:intron 40.0%
! GTTTTTGTGGGACATGGATT+TGG + chr1.1:51871126-51871145 MS.gene036069:CDS 40.0%
! TATTGTTTGGGACGCGTTTA+CGG - chr1.1:51868428-51868447 None:intergenic 40.0%
!! CCTATTGGTTCTAAAACCTG+TGG - chr1.1:51869772-51869791 None:intergenic 40.0%
!! TCAAAGCGCATTAGCTTTAG+TGG - chr1.1:51870300-51870319 None:intergenic 40.0%
!!! CCACAGGTTTTAGAACCAAT+AGG + chr1.1:51869769-51869788 MS.gene036069:CDS 40.0%
ACCAACCAAACCATGCCAAT+TGG + chr1.1:51870938-51870957 MS.gene036069:intron 45.0%
ACCAATAGGGCAACAACATC+TGG + chr1.1:51869783-51869802 MS.gene036069:CDS 45.0%
AGCAACAGGAAAGGATCGAA+CGG + chr1.1:51869815-51869834 MS.gene036069:CDS 45.0%
AGGACCAACTCTTCATCACT+AGG - chr1.1:51867739-51867758 None:intergenic 45.0%
CACATGAGGTTGTAGGAATG+AGG + chr1.1:51869853-51869872 MS.gene036069:CDS 45.0%
CATGGAAGGAATGAGATTCG+AGG + chr1.1:51871180-51871199 MS.gene036069:CDS 45.0%
CATTCCTTCCATGTCTGATG+AGG - chr1.1:51871173-51871192 None:intergenic 45.0%
CCAACCAAACCATGCCAATT+GGG + chr1.1:51870939-51870958 MS.gene036069:intron 45.0%
CCAATAGGGCAACAACATCT+GGG + chr1.1:51869784-51869803 MS.gene036069:CDS 45.0%
CCAATCACACATGAGGTTGT+AGG + chr1.1:51869846-51869865 MS.gene036069:CDS 45.0%
CCTACAACCTCATGTGTGAT+TGG - chr1.1:51869849-51869868 None:intergenic 45.0%
GAGAAAGTTGGAGGAGTGAT+TGG + chr1.1:51870576-51870595 MS.gene036069:intron 45.0%
GGATAAAATCGAAAGCCAGG+GGG - chr1.1:51867718-51867737 None:intergenic 45.0%
GTACCTTAGGTGGCATATGT+GGG - chr1.1:51869959-51869978 None:intergenic 45.0%
TACCTTAGGTGGCATATGTG+GGG - chr1.1:51869958-51869977 None:intergenic 45.0%
TGTACCCAATTGGCATGGTT+TGG - chr1.1:51870946-51870965 None:intergenic 45.0%
TTGGTTGTACCCAATTGGCA+TGG - chr1.1:51870951-51870970 None:intergenic 45.0%
! GATGAAGCCTATGGTTTGTG+AGG + chr1.1:51870140-51870159 MS.gene036069:intron 45.0%
! GGAAGATCATCATGATGGTG+TGG + chr1.1:51871147-51871166 MS.gene036069:CDS 45.0%
! GGGGTTTTGCAGTTACGTTA+CGG + chr1.1:51868225-51868244 MS.gene036069:intron 45.0%
!! ATGGTTTGGTTGGTTAGGGA+TGG - chr1.1:51870932-51870951 None:intergenic 45.0%
!! TCTGGGTATTGGAAAGCAAC+AGG + chr1.1:51869801-51869820 MS.gene036069:CDS 45.0%
!! TGGCATGGTTTGGTTGGTTA+GGG - chr1.1:51870936-51870955 None:intergenic 45.0%
!! TGGTTTGGTTGGTTAGGGAT+GGG - chr1.1:51870931-51870950 None:intergenic 45.0%
!! TTGGCATGGTTTGGTTGGTT+AGG - chr1.1:51870937-51870956 None:intergenic 45.0%
ACTTGCATACATGCGAGCCT+TGG + chr1.1:51867821-51867840 MS.gene036069:CDS 50.0%
CCCAGATGTTGTTGCCCTAT+TGG - chr1.1:51869787-51869806 None:intergenic 50.0%
CGTACCTTAGGTGGCATATG+TGG - chr1.1:51869960-51869979 None:intergenic 50.0%
CGTGACCGTAAATATGCCAC+AGG + chr1.1:51869753-51869772 MS.gene036069:CDS 50.0%
GCGGTTAAAACGGCTTCTCT+AGG + chr1.1:51868509-51868528 MS.gene036069:intron 50.0%
GGGCAACAACATCTGGGTAT+TGG + chr1.1:51869790-51869809 MS.gene036069:CDS 50.0%
! AGGGAGTGTGATGAAGCCTA+TGG + chr1.1:51870131-51870150 MS.gene036069:intron 50.0%
! GGTTTGGTTGGTTAGGGATG+GGG - chr1.1:51870930-51870949 None:intergenic 50.0%
!! CCCAATTGGCATGGTTTGGT+TGG - chr1.1:51870942-51870961 None:intergenic 50.0%
!! GGATGTTCTCAAGGGTACCT+TGG + chr1.1:51867789-51867808 MS.gene036069:CDS 50.0%
!! TGTTCTCAAGGGTACCTTGG+AGG + chr1.1:51867792-51867811 MS.gene036069:CDS 50.0%
GACCCCACATATGCCACCTA+AGG + chr1.1:51869953-51869972 MS.gene036069:intron 55.0%
GTGGCCTCATCAGACATGGA+AGG + chr1.1:51871166-51871185 MS.gene036069:CDS 55.0%
TGGTGTGGCCTCATCAGACA+TGG + chr1.1:51871162-51871181 MS.gene036069:CDS 55.0%
TGCGAGCCTTGGCAACTTCC+TGG + chr1.1:51867832-51867851 MS.gene036069:CDS 60.0%
! GTCGGTGCTTCACTTCCCCC+TGG + chr1.1:51867700-51867719 MS.gene036069:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 51867685 51871231 51867685 ID=MS.gene036069
chr1.1 mRNA 51867685 51871231 51867685 ID=MS.gene036069.t1;Parent=MS.gene036069
chr1.1 exon 51867685 51867853 51867685 ID=MS.gene036069.t1.exon1;Parent=MS.gene036069.t1
chr1.1 CDS 51867685 51867853 51867685 ID=cds.MS.gene036069.t1;Parent=MS.gene036069.t1
chr1.1 exon 51869709 51869946 51869709 ID=MS.gene036069.t1.exon2;Parent=MS.gene036069.t1
chr1.1 CDS 51869709 51869946 51869709 ID=cds.MS.gene036069.t1;Parent=MS.gene036069.t1
chr1.1 exon 51871084 51871231 51871084 ID=MS.gene036069.t1.exon3;Parent=MS.gene036069.t1
chr1.1 CDS 51871084 51871231 51871084 ID=cds.MS.gene036069.t1;Parent=MS.gene036069.t1
Gene Sequence

>MS.gene036069

ATGGGTCTTAGAGATGTCGGTGCTTCACTTCCCCCTGGCTTTCGATTTTATCCTAGTGATGAAGAGTTGGTCCTTCATTACCTTTACAAAAAAATCACAAATGAGGATGTTCTCAAGGGTACCTTGGAGGAAATTGACTTGCATACATGCGAGCCTTGGCAACTTCCTGGTATATATTATATTTATCATCATTTTCACTTGATCTCTTTAATTTTAGTTTCATTAATTAGTTGTCTTTGTTTTCTATTGCTTATTTAACCATATATTAATTCTTTGGTTAATTGACATTCACAAACACATGGTGTACAACATCATTAATTAACTTGGAAGAAATATTTTTAACATCTTTAGTTATGTTTTGTTTGAGCCTTATATTTATTTATGAGTTGAAACTTGAAATATATTTGCCTTTTTAAAAGAAGGAAACTTTGGAAAAAAAAGAAGAAGAAATAATTAAAGGTGCAAGTTCTTGCATATAACAGAAAGCATATGAGATCATGAGAATGAGAGTGCAATAAAATAAAAGAGAAAATTGGTTATGGGGTTTTGCAGTTACGTTACGGTTAATAGTTTATTGTTCAGTTCTTCAATGATTAAGGCTATTAATGGAAACTTCTTCATCAATATACTTGTCTCTTCCAATAAATAATTTTTTTATATAATATGGTACTATTTGATTATGCCGTTTTACATAATTGCTTTTGTCTTTTGTGAAGTTTGTACCTAGTTGTTTTTTTCTGCCGTAAACGCGTCCCAAACAATATTATGATCTCTATGAAAATCAAACTATGAAGATTCTAAATATTCTTCTTGCTTTTCTTTATGCGGTTAAAACGGCTTCTCTAGGTATTTTACTTTTGTGGTTAATATTCTATCCTTTCACTTTCATTTGATTAATTATTACATGTTTTTTCAAACTTACTATTTTTCTCTATGTTTATCTATCTATTTATCTTTTATTTTCTGATTCCTGCATGTATTTAAGTCTATATTAAATACACATGCACATGACTGTTCCATACAACATTTGATCTTTCACACAAATGTTTTGGGCTTTTGCATTCATTTGCTACTTCTTTTGTGAATGATAATTGAGGTTACTTCCATACCTTGTCATAAATTGTAACATAAAATATATAACTAGAAATTATGTTAATATATATTCACTCAATATATAAACTTAAAAAAGAAAGTCGTCATACAAAATAGGAATTTAAAGTGTATACACTATCAAAGCAAAATAGGAATTTAAAGTGTATACAAAATAGGAATTTAGTGTAAATTATTGTTTTGCTTTGATAGTCTACCATTAAAGTCTACAAAATATACACAATTATTTTTAAAAAAATTATCGTTATTGATGGTAAAATTGGACGTTATTCTCTCAGTAATTTTACATAGATAATCAACATTATCTTTTAAGCATGCTTTGCGAATATTCTGTAAGGTGCATAATGCTTGTATCTTCTTCAACTAGTTTCTGAATTTAGACACAATCATGAAATTAATCAAACATTAGCTTATGGAAATATTTCTAGCTAGTTCTAAGATAATTTGTGCTTATTTTAGATACCAATAAGCAATTTTTCATGTTAAAAACAAACTCCTCTTTTTGTAAATGGGGTGAAACTGAAAAATACAAAGAGAACGGAATTACACATATATAGCAAATCACGTTTGAAAATTGAAACCCCAAAAATAACATGCTTAGGTCACTTTATCCGTCTCAATTGGAAACTTGAAAATTACATGTCATTTATGAACTAATTGACACGCTAATTAACGTGATCATCATATTCATACATAAACAAAACCAAATTATTTTTGTCATTATTGTCATAATTATTCTAATACGTACTTAGAAACAATTAATTATTTGCACACAATGATATTAGATTATATTCTTATCTATCTAACACCCTTGTTTTACCTACCTAAGTCACATGTTTTTCCATATGGTACTAAAAATTGACCTATTATCTCTATTCATGCATGCGTGCTTTTGTTTTTTTTTTTTTATTCAGAGGTGGCTAAACTCAACGCAACTGAATGGTACTTCTTCAGCTTTCGTGACCGTAAATATGCCACAGGTTTTAGAACCAATAGGGCAACAACATCTGGGTATTGGAAAGCAACAGGAAAGGATCGAACGGTGTTTGATCCAATCACACATGAGGTTGTAGGAATGAGGAAAACTCTAGTGTTCTATAGGAATAGAGCTCCAAATGGAATCAAAACAGGTTGGATCATGCATGAGTTTAGGTTGGAGACCCCACATATGCCACCTAAGGTACGTTTATTTTTACTTTTTCTTTACCTTTCAATCAATTTTCAAACGTGACAATGATAGGTTATATCACGATTATTTTTTTTTTTTTGAAAGAATATCACGATTATTATTATCTTTAAGTTTACGCGTTTGCATAATGTAATTGCCACATAATAAAGGGAGTGTGATGAAGCCTATGGTTTGTGAGGGTTTAATAAGAAGAGTCATTTATATGTGTAGTTTTTATTAGGTATAAATAAAAAAATTGGCTACCTAAGAAGCAAGTTGAAATCTTTTTTATTTTTCAAAAGAAATTAAAATGTCCATTTAGTAGTGTGAGGATCCACTAAAGCTAATGCGCTTTGATGAGAATTGAGAACTACTATTATACCTTGATGGAGATATTTTATCTTACTAGATCTAATGATTTAATTAATTAATTAAACATTAGTTCCATTTCAAAAAACATTAAAACATTAATTAAAAATGATTGACTAATTATAAGTATAAAAAACATCAATGTAGAATAAATTCAAGTTTTCTTACAAGAATCTCTAATTAAGTTTTTTTAATAAACTTGACGTGGAAACAAAATTCAAGAGCTAGCTATTTAAAATAAGGTGAGAAAGTTGGAGGAGTGATTGGATTTAGCATCTTTTTGAGATAGAGGAAAACAATGTGTATGTGAGGACTTTTTTGGTCCAAATCTTAATTAAGAGATTTATTGTTGTCATTGATTGAATTGGATAGAATAGAATATTTCATAAGTGGAAAAGAAATGATTCTCACGTATTTTAGGTGTGATGTTAAAGCTTCTTTAAAAATCTAGTTATTTTGGTTTCACATTTATTTTTGCTAATTAGTTCAAACTTTTGTTGATTACAGGAAGACTGGGTTTTGTGTAGAGTATTTCATAAAGGCAAGACAGAAAATAATGCCAAATTAAGTCCACAAGAAATGTATGAGACTATAGCCCCATCCCTAACCAACCAAACCATGCCAATTGGGTACAACCAATTTGCTTCTTTCTCATCTTCAATGACAACCCACCATTGTCATTTAAATGAGAACCAAAATAATTCTTTGATGAATTTTCTTCAATTTTCTAAGGAAACAAACAACAATTGTAGTAGTATTACTCAAATTAGTCCTAAATGTGATGATGGATATGGGTTTTTGTGGGACATGGATTTGGAAGATCATCATGATGGTGTGGCCTCATCAGACATGGAAGGAATGAGATTCGAGGTTGATAATAATAGCATGGTCTTGTTATAA
Protein sequence

>MS.gene036069.t1

MGLRDVGASLPPGFRFYPSDEELVLHYLYKKITNEDVLKGTLEEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPITHEVVGMRKTLVFYRNRAPNGIKTGWIMHEFSSITQISPKCDDGYGFLWDMDLEDHHDGVASSDMEGMRFEVDNNSMVLL