AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036149

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036149.t1 MTR_1g070455 99.419 172 1 0 1 172 182 353 1.35e-127 364
MS.gene036149.t1 MTR_1g009613 52.062 194 76 4 8 191 152 338 1.66e-57 185
MS.gene036149.t1 MTR_4g094908 56.044 182 58 4 2 170 152 324 7.28e-56 181
MS.gene036149.t1 MTR_5g016610 74.074 108 26 2 64 170 151 257 1.29e-53 173
MS.gene036149.t1 MTR_4g127040 63.768 138 39 4 37 171 175 304 2.40e-52 171
MS.gene036149.t1 MTR_3g108960 49.351 154 66 5 24 169 222 371 6.93e-40 141
MS.gene036149.t1 MTR_0117s0040 51.485 101 43 2 91 186 53 152 1.35e-31 115
MS.gene036149.t1 MTR_2g016770 56.471 85 36 1 87 170 9 93 2.97e-28 106
MS.gene036149.t1 MTR_2g016770 56.098 82 35 1 90 170 4 85 4.12e-27 103
MS.gene036149.t1 MTR_8g087000 51.042 96 37 2 88 176 45 137 1.16e-26 103
MS.gene036149.t1 MTR_2g032030 52.632 95 40 2 80 169 230 324 1.78e-26 105
MS.gene036149.t1 MTR_2g032030 52.632 95 40 2 80 169 230 324 1.83e-26 106
MS.gene036149.t1 MTR_2g024350 65.079 63 22 0 109 171 5 67 2.64e-26 101
MS.gene036149.t1 MTR_2g083870 53.191 94 28 2 88 170 50 138 3.13e-26 102
MS.gene036149.t1 MTR_2g024380 54.118 85 36 1 87 171 229 310 5.73e-26 104
MS.gene036149.t1 MTR_8g087000 65.152 66 20 1 111 176 76 138 9.55e-26 100
MS.gene036149.t1 MTR_7g079040 57.831 83 30 1 87 169 134 211 1.14e-25 102
MS.gene036149.t1 MTR_8g028565 57.831 83 30 2 87 169 135 212 7.72e-24 97.4
MS.gene036149.t1 MTR_7g109600 48.515 101 46 2 73 169 12 110 4.89e-23 94.0
MS.gene036149.t1 MTR_1g099600 66.102 59 20 0 113 171 186 244 8.44e-23 94.0
MS.gene036149.t1 MTR_8g098945 59.322 59 24 0 113 171 130 188 4.60e-20 86.3
MS.gene036149.t1 MTR_5g094430 59.016 61 24 1 109 169 227 286 1.01e-19 86.7
MS.gene036149.t1 MTR_5g094430 59.016 61 24 1 109 169 249 308 1.07e-19 87.0
MS.gene036149.t1 MTR_5g094430 59.016 61 24 1 109 169 361 420 1.46e-19 86.7
MS.gene036149.t1 MTR_5g042920 34.965 143 88 2 27 169 239 376 2.70e-19 85.9
MS.gene036149.t1 MTR_5g042920 54.839 62 25 3 109 169 147 206 4.42e-13 67.8
MS.gene036149.t1 MTR_3g056100 59.016 61 24 1 109 169 268 327 3.21e-19 85.5
MS.gene036149.t1 MTR_3g056100 59.016 61 24 1 109 169 255 314 3.28e-19 85.5
MS.gene036149.t1 MTR_3g056100 59.016 61 24 1 109 169 399 458 3.56e-19 85.9
MS.gene036149.t1 MTR_3g056100 59.016 61 24 1 109 169 412 471 3.63e-19 85.9
MS.gene036149.t1 MTR_7g109800 44.578 83 45 1 87 169 120 201 3.66e-19 84.0
MS.gene036149.t1 MTR_1g013760 48.611 72 35 1 98 169 128 197 3.86e-19 84.0
MS.gene036149.t1 MTR_4g013260 48.235 85 39 3 96 176 317 400 4.03e-19 85.5
MS.gene036149.t1 MTR_4g013260 50.847 59 28 1 113 171 185 242 1.28e-13 69.3
MS.gene036149.t1 MTR_4g082580 48.718 78 39 1 92 169 258 334 5.13e-19 84.7
MS.gene036149.t1 MTR_8g067635 49.412 85 40 1 87 171 327 408 5.15e-19 85.1
MS.gene036149.t1 MTR_7g011820 63.158 57 20 1 113 169 411 466 5.16e-19 85.1
MS.gene036149.t1 MTR_7g011820 53.125 64 27 3 109 171 224 285 6.44e-14 70.5
MS.gene036149.t1 MTR_3g106060 55.172 58 26 0 113 170 139 196 6.32e-19 83.2
MS.gene036149.t1 MTR_4g094412 60.377 53 21 0 117 169 239 291 7.65e-19 84.7
MS.gene036149.t1 MTR_4g094412 60.377 53 21 0 117 169 248 300 8.51e-19 84.3
MS.gene036149.t1 MTR_2g023930 48.649 74 38 0 96 169 289 362 1.25e-18 84.0
MS.gene036149.t1 MTR_3g053330 52.381 63 30 0 108 170 247 309 1.54e-18 83.6
MS.gene036149.t1 MTR_7g110720 46.341 82 36 1 88 169 200 273 1.77e-18 83.6
MS.gene036149.t1 MTR_7g100510 57.895 57 23 1 113 169 362 417 1.80e-18 83.6
MS.gene036149.t1 MTR_7g100510 52.055 73 30 4 100 171 178 246 2.41e-15 74.3
MS.gene036149.t1 MTR_8g069935 57.377 61 26 0 113 173 332 392 1.88e-18 83.6
MS.gene036149.t1 MTR_7g110720 46.341 82 36 1 88 169 173 246 2.13e-18 83.2
MS.gene036149.t1 MTR_4g049790 57.895 57 24 0 113 169 313 369 2.37e-18 83.2
MS.gene036149.t1 MTR_7g062220 46.988 83 40 2 95 177 110 188 3.25e-18 81.6
MS.gene036149.t1 MTR_4g007060 43.333 90 47 2 86 171 98 187 3.28e-18 81.3
MS.gene036149.t1 MTR_4g007060 43.333 90 47 2 86 171 132 221 3.98e-18 81.6
MS.gene036149.t1 MTR_2g088000 48.000 75 39 0 96 170 333 407 5.69e-18 82.4
MS.gene036149.t1 MTR_7g071120 33.333 165 89 5 15 169 227 380 7.06e-18 82.0
MS.gene036149.t1 MTR_7g071120 52.542 59 26 2 113 171 167 223 1.60e-12 66.2
MS.gene036149.t1 MTR_4g130900 57.895 57 23 1 113 169 360 415 8.10e-18 81.6
MS.gene036149.t1 MTR_3g031220 48.718 78 39 1 92 169 345 421 1.13e-17 81.3
MS.gene036149.t1 MTR_3g031220 54.237 59 25 2 113 171 199 255 9.86e-14 69.7
MS.gene036149.t1 MTR_7g080000 48.718 78 36 2 95 169 412 488 1.19e-17 81.3
MS.gene036149.t1 MTR_7g080000 54.237 59 25 2 113 171 235 291 1.23e-12 66.6
MS.gene036149.t1 MTR_5g074400 36.508 126 72 2 51 169 352 476 1.48e-17 80.9
MS.gene036149.t1 MTR_5g074400 52.542 59 26 2 113 171 244 300 2.77e-13 68.6
MS.gene036149.t1 MTR_7g009730 56.140 57 25 0 113 169 220 276 1.53e-17 80.9
MS.gene036149.t1 MTR_5g091390 56.140 57 24 1 113 169 158 213 1.90e-17 79.3
MS.gene036149.t1 MTR_4g094588 54.386 57 25 1 113 169 179 234 2.09e-17 79.7
MS.gene036149.t1 MTR_4g107970 53.448 58 27 0 113 170 179 236 2.33e-17 80.5
MS.gene036149.t1 MTR_3g009470 49.351 77 38 1 93 169 476 551 2.58e-17 80.5
MS.gene036149.t1 MTR_3g009470 52.542 59 26 2 113 171 281 337 1.88e-12 66.2
MS.gene036149.t1 MTR_2g105060 52.632 57 27 0 113 169 170 226 2.86e-17 79.0
MS.gene036149.t1 MTR_2g105060 52.632 57 27 0 113 169 95 151 2.86e-17 77.8
MS.gene036149.t1 MTR_4g107970 53.448 58 27 0 113 170 256 313 3.21e-17 80.1
MS.gene036149.t1 MTR_4g132430 54.386 57 26 0 113 169 128 184 3.71e-17 79.3
MS.gene036149.t1 MTR_7g080020 49.351 77 35 2 96 169 474 549 3.79e-17 80.1
MS.gene036149.t1 MTR_7g080020 52.542 59 26 2 113 171 281 337 5.63e-12 64.7
MS.gene036149.t1 MTR_3g104750 41.414 99 56 2 71 169 64 160 3.80e-17 75.9
MS.gene036149.t1 MTR_5g097490 54.545 66 28 2 113 177 253 317 4.34e-17 79.3
MS.gene036149.t1 MTR_4g132430 54.386 57 26 0 113 169 262 318 4.72e-17 79.3
MS.gene036149.t1 MTR_2g045360 54.386 57 26 0 113 169 212 268 5.63e-17 79.0
MS.gene036149.t1 MTR_5g043880 40.909 88 51 1 87 174 99 185 7.49e-17 77.4
MS.gene036149.t1 MTR_1g015140 38.000 100 59 2 70 169 62 158 9.71e-17 74.7
MS.gene036149.t1 MTR_8g067650 52.564 78 36 1 95 171 321 398 1.43e-16 78.2
MS.gene036149.t1 MTR_6g053200 43.678 87 46 1 85 171 306 389 2.67e-16 77.4
MS.gene036149.t1 MTR_8g007270 41.379 87 47 2 87 170 126 211 3.19e-16 74.7
MS.gene036149.t1 MTR_1g086790 39.759 83 49 1 87 169 133 214 4.03e-16 75.9
MS.gene036149.t1 MTR_5g067680 39.623 106 56 4 69 167 155 259 4.42e-16 76.3
MS.gene036149.t1 MTR_8g092140 47.619 63 32 1 108 170 156 217 5.93e-16 74.3
MS.gene036149.t1 MTR_1g013790 31.579 133 61 3 113 216 102 233 8.16e-16 74.3
MS.gene036149.t1 MTR_7g079010 43.750 80 41 2 93 169 119 197 1.25e-15 73.2
MS.gene036149.t1 MTR_3g095080 47.619 63 32 1 108 170 140 201 2.27e-15 72.4
MS.gene036149.t1 MTR_4g049760 56.604 53 23 0 117 169 295 347 2.56e-15 74.3
MS.gene036149.t1 MTR_3g095080 47.619 63 32 1 108 170 164 225 2.70e-15 72.8
MS.gene036149.t1 MTR_8g092010 52.459 61 28 1 109 169 105 164 3.17e-15 71.2
MS.gene036149.t1 MTR_3g090860 54.386 57 24 1 113 167 134 190 5.03e-15 73.2
MS.gene036149.t1 MTR_1g077780 42.308 78 44 1 92 169 42 118 1.37e-14 68.6
MS.gene036149.t1 MTR_2g033820 50.877 57 27 1 113 169 204 259 2.92e-14 71.2
MS.gene036149.t1 MTR_3g095040 42.500 80 45 1 90 169 96 174 3.31e-14 68.9
MS.gene036149.t1 MTR_3g031220 54.237 59 25 2 113 171 199 255 5.98e-14 70.1
MS.gene036149.t1 MTR_7g117200 52.632 57 25 1 113 167 119 175 9.83e-14 69.3
MS.gene036149.t1 MTR_4g122530 47.368 57 29 1 113 169 209 264 1.14e-13 69.3
MS.gene036149.t1 MTR_1g078260 52.308 65 29 2 109 172 244 307 3.84e-13 68.2
MS.gene036149.t1 MTR_8g027860 41.860 86 47 2 85 167 108 193 3.86e-13 67.8
MS.gene036149.t1 MTR_7g028415 45.161 62 33 1 108 169 89 149 5.11e-13 65.1
MS.gene036149.t1 MTR_7g028710 45.161 62 33 1 108 169 89 149 5.11e-13 65.1
MS.gene036149.t1 MTR_6g086555 30.968 155 91 5 17 170 125 264 9.67e-13 66.6
MS.gene036149.t1 MTR_3g009470 52.542 59 26 2 113 171 281 337 1.24e-12 66.6
MS.gene036149.t1 MTR_8g099350 49.123 57 27 1 113 167 133 189 1.25e-12 66.2
MS.gene036149.t1 MTR_5g018380 50.847 59 26 2 112 170 123 178 1.92e-12 63.5
MS.gene036149.t1 MTR_4g052030 46.552 58 19 1 115 172 8 53 3.16e-12 59.7
MS.gene036149.t1 MTR_8g087000 60.000 45 15 1 132 176 35 76 1.25e-11 61.6
MS.gene036149.t1 MTR_4g047580 46.429 56 30 0 113 168 282 337 6.91e-11 61.6
MS.gene036149.t1 MTR_5g067700 49.123 57 27 1 113 167 107 163 8.48e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036149.t1 AT2G30590 77.143 175 35 5 1 172 201 373 1.36e-92 276
MS.gene036149.t1 AT5G28650 68.571 175 48 3 2 172 151 322 4.31e-81 245
MS.gene036149.t1 AT3G04670 69.318 176 43 5 1 172 154 322 7.22e-79 239
MS.gene036149.t1 AT4G31550 51.934 181 68 6 2 169 129 303 8.12e-54 175
MS.gene036149.t1 AT4G24240 54.598 174 54 6 6 170 182 339 2.90e-53 175
MS.gene036149.t1 AT4G31550 52.486 181 66 7 2 169 129 302 5.80e-53 173
MS.gene036149.t1 AT2G24570 56.376 149 51 3 33 169 154 300 5.85e-53 173
MS.gene036149.t1 AT2G23320 70.536 112 25 3 64 170 190 298 2.51e-51 169
MS.gene036149.t1 AT3G04670 65.714 140 37 5 1 136 154 286 9.66e-51 166
MS.gene036149.t1 AT1G29280 55.435 92 34 3 85 169 40 131 2.75e-28 107
MS.gene036149.t1 AT4G24240 47.059 136 47 6 6 132 182 301 2.42e-26 103
MS.gene036149.t1 AT2G34830 51.515 99 43 2 76 169 174 272 5.21e-26 104
MS.gene036149.t1 AT4G01250 45.600 125 62 2 46 169 66 185 5.29e-26 102
MS.gene036149.t1 AT4G31550 45.139 144 59 7 2 132 129 265 5.69e-26 101
MS.gene036149.t1 AT2G34830 51.515 99 43 2 76 169 183 281 6.35e-26 104
MS.gene036149.t1 AT3G58710 52.688 93 28 2 88 169 40 127 1.24e-25 100
MS.gene036149.t1 AT2G23320 67.568 74 16 3 64 132 190 260 1.50e-25 100
MS.gene036149.t1 AT3G58710 51.613 93 29 2 88 169 41 128 6.04e-25 99.4
MS.gene036149.t1 AT1G30650 52.874 87 36 1 88 169 188 274 1.23e-24 100
MS.gene036149.t1 AT5G52830 52.941 85 36 1 87 171 144 224 4.11e-23 95.5
MS.gene036149.t1 AT4G23550 63.158 57 21 0 113 169 141 197 1.49e-20 88.2
MS.gene036149.t1 AT5G26170 56.667 60 25 1 113 172 114 172 2.10e-20 84.7
MS.gene036149.t1 AT4G18170 39.450 109 59 2 61 169 127 228 5.18e-20 86.7
MS.gene036149.t1 AT2G04880 60.317 63 24 1 107 169 302 363 1.20e-19 87.0
MS.gene036149.t1 AT2G04880 60.317 63 24 1 107 169 278 339 1.33e-19 86.7
MS.gene036149.t1 AT2G38470 59.016 61 24 1 109 169 359 418 7.04e-19 84.7
MS.gene036149.t1 AT2G38470 54.237 59 25 2 113 171 185 241 4.88e-14 70.9
MS.gene036149.t1 AT5G45050 45.783 83 41 1 87 169 1131 1209 9.32e-19 84.7
MS.gene036149.t1 AT5G45050 45.783 83 41 1 87 169 1159 1237 1.05e-18 84.7
MS.gene036149.t1 AT5G07100 49.383 81 39 2 89 169 119 197 1.09e-18 81.3
MS.gene036149.t1 AT5G07100 48.529 68 31 2 104 171 19 82 4.07e-13 66.2
MS.gene036149.t1 AT5G07100 49.383 81 39 2 89 169 119 197 1.09e-18 81.3
MS.gene036149.t1 AT5G07100 48.529 68 31 2 104 171 19 82 4.07e-13 66.2
MS.gene036149.t1 AT5G07100 49.383 81 39 2 89 169 119 197 1.09e-18 81.3
MS.gene036149.t1 AT5G07100 48.529 68 31 2 104 171 19 82 4.07e-13 66.2
MS.gene036149.t1 AT5G07100 49.383 81 39 2 89 169 119 197 1.09e-18 81.3
MS.gene036149.t1 AT5G07100 48.529 68 31 2 104 171 19 82 4.07e-13 66.2
MS.gene036149.t1 AT5G45050 45.783 83 41 1 87 169 1020 1098 1.24e-18 84.3
MS.gene036149.t1 AT4G04450 57.895 57 24 0 113 169 199 255 1.35e-18 84.0
MS.gene036149.t1 AT1G68150 57.895 57 24 0 113 169 236 292 1.37e-18 83.6
MS.gene036149.t1 AT1G13960 44.211 95 39 2 88 169 372 465 1.93e-18 83.6
MS.gene036149.t1 AT1G13960 48.101 79 32 4 91 169 215 284 3.05e-15 74.3
MS.gene036149.t1 AT4G04450 48.649 74 38 0 96 169 276 349 2.02e-18 83.6
MS.gene036149.t1 AT1G13960 47.436 78 40 1 92 169 236 312 2.05e-18 82.8
MS.gene036149.t1 AT1G13960 47.500 80 31 4 91 169 62 131 5.68e-15 73.2
MS.gene036149.t1 AT5G07100 49.383 81 39 2 89 169 212 290 2.89e-18 81.6
MS.gene036149.t1 AT5G07100 48.529 68 31 2 104 171 112 175 6.25e-13 67.0
MS.gene036149.t1 AT1G62300 47.297 74 39 0 96 169 296 369 3.34e-18 82.8
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 202 261 3.41e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 202 261 3.41e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 202 261 3.41e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 202 261 3.41e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 378 437 4.60e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 306 365 5.25e-18 82.4
MS.gene036149.t1 AT4G26640 57.377 61 25 1 109 169 338 397 5.35e-18 82.4
MS.gene036149.t1 AT1G29860 44.595 74 40 1 96 169 120 192 5.47e-18 80.5
MS.gene036149.t1 AT4G30935 56.140 57 24 1 113 169 332 387 6.12e-18 82.0
MS.gene036149.t1 AT4G22070 56.140 57 25 0 113 169 298 354 7.79e-18 82.0
MS.gene036149.t1 AT4G22070 56.140 57 25 0 113 169 298 354 7.79e-18 82.0
MS.gene036149.t1 AT4G22070 56.140 57 25 0 113 169 298 354 7.79e-18 82.0
MS.gene036149.t1 AT4G22070 56.140 57 25 0 113 169 298 354 7.79e-18 82.0
MS.gene036149.t1 AT5G49520 56.140 57 24 1 113 169 222 277 1.20e-17 80.9
MS.gene036149.t1 AT4G01720 57.895 57 24 0 113 169 240 296 1.38e-17 81.3
MS.gene036149.t1 AT2G40740 40.860 93 52 2 78 167 138 230 1.45e-17 79.7
MS.gene036149.t1 AT5G15130 55.172 58 26 0 113 170 186 243 1.51e-17 80.9
MS.gene036149.t1 AT5G15130 55.172 58 26 0 113 170 228 285 1.78e-17 80.9
MS.gene036149.t1 AT2G03340 46.154 78 41 1 92 169 395 471 1.79e-17 80.9
MS.gene036149.t1 AT2G03340 55.556 63 25 3 108 169 245 305 2.73e-14 71.6
MS.gene036149.t1 AT2G40740 40.860 93 52 2 78 167 147 239 1.86e-17 79.3
MS.gene036149.t1 AT3G01080 47.436 78 40 1 92 169 324 400 2.35e-17 80.5
MS.gene036149.t1 AT3G01080 51.562 64 28 3 109 171 201 262 1.16e-13 69.7
MS.gene036149.t1 AT3G01080 47.436 78 40 1 92 169 286 362 2.75e-17 80.1
MS.gene036149.t1 AT3G01080 51.562 64 28 3 109 171 163 224 1.22e-13 69.3
MS.gene036149.t1 AT4G31800 41.096 73 43 0 97 169 96 168 3.12e-17 78.2
MS.gene036149.t1 AT1G69310 41.573 89 48 2 89 174 121 208 3.86e-17 78.6
MS.gene036149.t1 AT1G69310 41.573 89 48 2 89 174 121 208 3.86e-17 78.6
MS.gene036149.t1 AT1G69310 41.573 89 48 2 89 174 121 208 3.86e-17 78.6
MS.gene036149.t1 AT5G56270 49.351 77 38 1 93 169 468 543 4.01e-17 79.7
MS.gene036149.t1 AT5G56270 50.847 59 27 2 113 171 274 330 4.59e-11 62.0
MS.gene036149.t1 AT4G31800 41.096 73 43 0 97 169 161 233 4.48e-17 78.6
MS.gene036149.t1 AT2G47260 40.964 83 48 1 87 169 149 230 4.53e-17 79.0
MS.gene036149.t1 AT2G37260 43.137 102 52 2 68 169 230 325 4.86e-17 79.0
MS.gene036149.t1 AT2G37260 54.237 59 25 2 113 171 86 142 1.75e-13 68.9
MS.gene036149.t1 AT2G37260 43.137 102 52 2 68 169 228 323 5.18e-17 78.6
MS.gene036149.t1 AT2G37260 54.237 59 25 2 113 171 84 140 1.84e-13 68.6
MS.gene036149.t1 AT2G37260 43.137 102 52 2 68 169 310 405 5.46e-17 79.3
MS.gene036149.t1 AT2G37260 54.237 59 25 2 113 171 166 222 1.53e-13 69.3
MS.gene036149.t1 AT5G45260 46.067 89 37 3 88 171 1187 1269 9.30e-17 79.0
MS.gene036149.t1 AT4G39410 41.860 86 46 2 88 170 196 280 1.75e-16 77.0
MS.gene036149.t1 AT5G46350 52.632 57 26 1 113 169 184 239 2.15e-16 76.6
MS.gene036149.t1 AT1G80840 36.975 119 62 4 64 169 85 203 4.04e-16 75.9
MS.gene036149.t1 AT2G44745 41.667 84 45 2 89 169 119 201 4.08e-16 74.3
MS.gene036149.t1 AT4G26440 46.753 77 40 1 93 169 353 428 5.16e-16 76.6
MS.gene036149.t1 AT4G26440 51.613 62 27 3 111 171 176 235 2.29e-11 63.2
MS.gene036149.t1 AT5G43290 50.667 75 33 2 95 169 100 170 6.88e-16 74.7
MS.gene036149.t1 AT3G62340 43.902 82 45 1 90 171 96 176 6.91e-16 74.7
MS.gene036149.t1 AT1G18860 56.604 53 23 0 117 169 244 296 7.00e-16 76.3
MS.gene036149.t1 AT5G64810 46.667 75 38 2 109 183 107 179 1.02e-15 72.8
MS.gene036149.t1 AT2G25000 49.123 57 29 0 113 169 104 160 1.21e-15 73.6
MS.gene036149.t1 AT2G25000 49.123 57 29 0 113 169 104 160 1.21e-15 73.6
MS.gene036149.t1 AT1G69810 46.988 83 35 2 88 169 187 261 1.22e-15 75.1
MS.gene036149.t1 AT1G69810 46.988 83 35 2 88 169 129 203 1.42e-15 74.7
MS.gene036149.t1 AT2G21900 53.030 66 28 2 113 178 110 172 1.46e-15 72.8
MS.gene036149.t1 AT1G55600 52.459 61 28 1 109 169 304 363 1.49e-15 75.1
MS.gene036149.t1 AT5G41570 43.023 86 45 2 87 169 70 154 1.62e-15 72.0
MS.gene036149.t1 AT2G25000 48.276 58 30 0 113 170 126 183 2.51e-15 72.8
MS.gene036149.t1 AT2G25000 49.123 57 29 0 113 169 147 203 2.77e-15 73.2
MS.gene036149.t1 AT1G64000 38.095 84 51 1 86 169 88 170 3.46e-15 71.6
MS.gene036149.t1 AT2G46130 50.000 62 30 1 108 169 26 86 5.70e-15 68.9
MS.gene036149.t1 AT2G30250 43.038 79 41 3 94 169 307 384 6.05e-14 70.1
MS.gene036149.t1 AT3G01970 47.619 63 32 1 108 170 61 122 6.15e-14 67.0
MS.gene036149.t1 AT3G01080 51.562 64 28 3 109 171 201 262 7.93e-14 69.7
MS.gene036149.t1 AT4G11070 36.975 119 63 3 52 167 89 198 6.99e-13 66.6
MS.gene036149.t1 AT4G11070 36.975 119 63 3 52 167 57 166 7.09e-13 66.6
MS.gene036149.t1 AT5G13080 45.161 62 33 1 108 169 63 123 8.06e-13 63.9
MS.gene036149.t1 AT1G69310 39.326 89 46 3 89 174 121 204 1.09e-12 65.9
MS.gene036149.t1 AT4G23810 46.429 84 42 2 87 167 132 215 2.52e-12 65.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.61e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.61e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.64e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.64e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.69e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.73e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.79e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 1.95e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 2.02e-11 63.5
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 469 539 2.07e-11 63.2
MS.gene036149.t1 AT4G12020 45.205 73 34 3 113 181 402 472 2.09e-11 63.5
MS.gene036149.t1 AT1G66560 47.458 59 29 1 111 167 102 160 2.22e-11 62.0
MS.gene036149.t1 AT5G22570 43.750 80 38 2 95 167 88 167 3.42e-11 61.6
MS.gene036149.t1 AT3G56400 45.000 60 31 1 110 167 118 177 6.34e-11 61.2

Find 59 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATCTTGTTGCTGCTTC+AGG 0.268370 1.3:-50653077 MS.gene036149:CDS
TAGTAGCCTTGTCAAAATTA+AGG 0.303036 1.3:+50654751 None:intergenic
AGTGCTGGAGTATGTAAAAT+TGG 0.339279 1.3:-50653450 MS.gene036149:CDS
TAGAGTGAAGAGATCAATTA+AGG 0.339973 1.3:-50654407 MS.gene036149:CDS
GGAAGTTCCTTCCATTTGAT+TGG 0.353546 1.3:-50654651 MS.gene036149:CDS
CGCTCAACATGCTTCCTAGC+AGG 0.378003 1.3:+50653731 None:intergenic
GTGATTATGCTCGCCTTCAT+AGG 0.392014 1.3:+50653676 None:intergenic
TTATGCCGCTGGTGTTCCTT+CGG 0.429874 1.3:+50654775 None:intergenic
TTGGGGAGTCGTTTATTTAG+AGG 0.434562 1.3:-50653495 MS.gene036149:CDS
CACCAACAATGTCGTCTACT+AGG 0.435790 1.3:-50654722 MS.gene036149:CDS
TTTGGGTAGTAGCTTGGTTG+GGG 0.445798 1.3:-50653512 MS.gene036149:intron
TAGGTAACCATTAGCATAGT+AGG 0.453570 1.3:+50653695 None:intergenic
GGGTGAGGAGAGCCCTTGAT+AGG 0.454162 1.3:+50654313 None:intergenic
TGGGGAGTCGTTTATTTAGA+GGG 0.465245 1.3:-50653494 MS.gene036149:CDS
AGATCGGAGCTCCAATCAAA+TGG 0.468483 1.3:+50654640 None:intergenic
ATGCTAATGGTTACCTATGA+AGG 0.471493 1.3:-50653689 MS.gene036149:CDS
TTCCTCCATGAGTAATCATC+AGG 0.472648 1.3:+50654349 None:intergenic
GCATGAGAGGCTGCCCTGCT+AGG 0.472837 1.3:-50653745 MS.gene036149:CDS
GGATGAGCCTACTATGCTAA+TGG 0.481224 1.3:-50653702 MS.gene036149:CDS
AAAATTAAGGCTTATGCCGC+TGG 0.488025 1.3:+50654764 None:intergenic
GCAAGCTTGTTGCTGATAGC+AGG 0.495556 1.3:+50654382 None:intergenic
GATTACTCATGGAGGAAGTA+CGG 0.498681 1.3:-50654343 MS.gene036149:CDS
GTACGGGCAGAAGCCTATCA+AGG 0.510514 1.3:-50654326 MS.gene036149:CDS
GACCTAGTAGACGACATTGT+TGG 0.517470 1.3:+50654720 None:intergenic
ATTACCTCTTCTTTGAGCAA+TGG 0.528866 1.3:+50654532 None:intergenic
GAAGCATGTTGAGCGGTGCT+TGG 0.533891 1.3:-50653723 MS.gene036149:CDS
GAGGGAGTGATGAAGATCAC+TGG 0.535239 1.3:-50653476 MS.gene036149:CDS
TCCCTCCTGATGATTACTCA+TGG 0.545497 1.3:-50654354 MS.gene036149:CDS
GAAGATCACTGGTTTAGTGC+TGG 0.550783 1.3:-50653465 MS.gene036149:CDS
GGAAGCGTGGCTAACGTGGA+TGG 0.552072 1.3:-50654672 MS.gene036149:CDS
AATGCCATTGCTCAAAGAAG+AGG 0.554797 1.3:-50654536 MS.gene036149:intron
ATTTCCTCCTTGAGCATAGA+CGG 0.557646 1.3:-50654693 MS.gene036149:CDS
ATTACTCATGGAGGAAGTAC+GGG 0.557772 1.3:-50654342 MS.gene036149:CDS
GAATTCTGATCTGAAGAGAT+CGG 0.560341 1.3:+50654624 None:intergenic
CACGCTTCCGTCTATGCTCA+AGG 0.561562 1.3:+50654686 None:intergenic
AGACGGAAGCGTGGCTAACG+TGG 0.565434 1.3:-50654676 MS.gene036149:CDS
TCAAGGGCTCTCCTCACCCT+AGG 0.577561 1.3:-50654309 MS.gene036149:intron
ATGTTCTGCTAGAGGTGATG+AGG 0.577879 1.3:-50654586 MS.gene036149:CDS
TATAAGTGCAGCAGCATGAG+AGG 0.580000 1.3:-50653758 MS.gene036149:CDS
ATCAGAATTCACAGCACAAG+AGG 0.581042 1.3:-50654611 MS.gene036149:CDS
GTTGCTGCTTCAGGATGCAG+TGG 0.581685 1.3:-50653068 MS.gene036149:CDS
TGCTATCAGCAACAAGCTTG+CGG 0.581834 1.3:-50654380 MS.gene036149:CDS
TCAGGATGCAGTGGCTGTGA+AGG 0.583271 1.3:-50653059 MS.gene036149:CDS
GCTCAACATGCTTCCTAGCA+GGG 0.583433 1.3:+50653732 None:intergenic
CGGAGCTCCAATCAAATGGA+AGG 0.586112 1.3:+50654644 None:intergenic
CTCCATGAGTAATCATCAGG+AGG 0.604331 1.3:+50654352 None:intergenic
TTGTAGTGGTGTGACAGACA+AGG 0.620863 1.3:-50653098 MS.gene036149:intron
TGTTCTGCTAGAGGTGATGA+GGG 0.623984 1.3:-50654585 MS.gene036149:CDS
AAGCTGAAATGATGTTCCGA+AGG 0.624862 1.3:-50654791 None:intergenic
AAGAGGAAATGTTCTGCTAG+AGG 0.625674 1.3:-50654594 MS.gene036149:CDS
TCCATGAGTAATCATCAGGA+GGG 0.631195 1.3:+50654353 None:intergenic
GGTTGGACATACCTAGGGTG+AGG 0.641458 1.3:+50654298 None:intergenic
TACGGGCAGAAGCCTATCAA+GGG 0.654538 1.3:-50654325 MS.gene036149:CDS
CTGCTAGGAAGCATGTTGAG+CGG 0.660945 1.3:-50653730 MS.gene036149:CDS
CTTGAGCATAGACGGAAGCG+TGG 0.674043 1.3:-50654685 MS.gene036149:CDS
AGGCGAGCATAATCACGCCA+AGG 0.679418 1.3:-50653669 MS.gene036149:intron
CTCCTGATGATTACTCATGG+AGG 0.692245 1.3:-50654351 MS.gene036149:CDS
ATGTTCCGAAGGAACACCAG+CGG 0.729358 1.3:-50654780 MS.gene036149:CDS
GCTTCCGTCTATGCTCAAGG+AGG 0.768540 1.3:+50654689 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAATATCATATTACAA+TGG + chr1.3:50653385-50653404 None:intergenic 10.0%
!!! TTTTCAAGTTAAAAAAAAAA+GGG + chr1.3:50653887-50653906 None:intergenic 10.0%
!!! GTTTTCAAGTTAAAAAAAAA+AGG + chr1.3:50653888-50653907 None:intergenic 15.0%
!! AAATTAATGGAAATTGTCTT+CGG - chr1.3:50654477-50654496 MS.gene036149:intron 20.0%
!! AGTATGTTATTAAACATTTC+AGG - chr1.3:50654447-50654466 MS.gene036149:intron 20.0%
!! GTATGTTATTAAACATTTCA+GGG - chr1.3:50654448-50654467 MS.gene036149:intron 20.0%
!! TGTAATGAAAATTACAAACA+TGG + chr1.3:50653831-50653850 None:intergenic 20.0%
!! TTAAATCTCAAATAGCAAAA+CGG + chr1.3:50653563-50653582 None:intergenic 20.0%
!!! AATTTTATTGATTCGATTCA+AGG - chr1.3:50653581-50653600 MS.gene036149:intron 20.0%
!!! AATTTTGTTTTTTCGAATCA+AGG - chr1.3:50654519-50654538 MS.gene036149:intron 20.0%
!!! GTTAATTTCTGTTACTTTAA+AGG - chr1.3:50653350-50653369 MS.gene036149:intron 20.0%
! AAAATTACAAACATGGACAA+AGG + chr1.3:50653824-50653843 None:intergenic 25.0%
! AAAATTATTTAAATCCCCAC+AGG + chr1.3:50653751-50653770 None:intergenic 25.0%
! CATTATTGTCAATCAAATGA+AGG - chr1.3:50653974-50653993 MS.gene036149:intron 25.0%
! TGACAATAATGTGCAAATAA+TGG + chr1.3:50653965-50653984 None:intergenic 25.0%
! TGGATATGTAATATGTTGAT+TGG - chr1.3:50653781-50653800 MS.gene036149:intron 25.0%
!! TCTAATGGTTGATACATTAA+TGG - chr1.3:50653328-50653347 MS.gene036149:intron 25.0%
!! TGTGGGGATTTAAATAATTT+TGG - chr1.3:50653750-50653769 MS.gene036149:CDS 25.0%
!!! AAATAATTTTGGTCTATGTG+TGG - chr1.3:50653761-50653780 MS.gene036149:CDS 25.0%
!!! AGTATGGTTATCTTTGTTTT+GGG - chr1.3:50654630-50654649 MS.gene036149:CDS 25.0%
!!! TAGTATGGTTATCTTTGTTT+TGG - chr1.3:50654629-50654648 MS.gene036149:CDS 25.0%
CAAAGAAGAGGTAATTCTAA+TGG - chr1.3:50653313-50653332 MS.gene036149:intron 30.0%
TAGAGTGAAGAGATCAATTA+AGG - chr1.3:50653430-50653449 MS.gene036149:intron 30.0%
TTCAGGGTTCTCTAAATTAA+TGG - chr1.3:50654464-50654483 MS.gene036149:intron 30.0%
TTTGGAAAACACACTTTCTA+TGG - chr1.3:50654682-50654701 MS.gene036149:CDS 30.0%
!! AACTATTTTGTTATGCTGCT+TGG - chr1.3:50653656-50653675 MS.gene036149:intron 30.0%
!! CATAAGCCTTAATTTTGACA+AGG - chr1.3:50653080-50653099 MS.gene036149:CDS 30.0%
!! GTCTTGATTTTGTTTCTTCA+GGG - chr1.3:50654051-50654070 MS.gene036149:intron 30.0%
!! TAGTAGCCTTGTCAAAATTA+AGG + chr1.3:50653089-50653108 None:intergenic 30.0%
!! TCTTGATTTTGTTTCTTCAG+GGG - chr1.3:50654052-50654071 MS.gene036149:intron 30.0%
!! TGTCTTGATTTTGTTTCTTC+AGG - chr1.3:50654050-50654069 MS.gene036149:intron 30.0%
!! TTTTGCAATTTTGATGCTCT+AGG - chr1.3:50653924-50653943 MS.gene036149:intron 30.0%
AAAAAGGGCTATCGAACATA+TGG + chr1.3:50653872-50653891 None:intergenic 35.0%
ATCTCAAATAGCAAAACGGT+TGG + chr1.3:50653559-50653578 None:intergenic 35.0%
ATGCTAATGGTTACCTATGA+AGG - chr1.3:50654148-50654167 MS.gene036149:intron 35.0%
ATTACCTCTTCTTTGAGCAA+TGG + chr1.3:50653308-50653327 None:intergenic 35.0%
CTATGTGCGTATACATAGTA+TGG - chr1.3:50654614-50654633 MS.gene036149:CDS 35.0%
GAATTCTGATCTGAAGAGAT+CGG + chr1.3:50653216-50653235 None:intergenic 35.0%
GGTCTTCACAAATAGAATGA+CGG + chr1.3:50654235-50654254 None:intergenic 35.0%
GTCTTCACAAATAGAATGAC+GGG + chr1.3:50654234-50654253 None:intergenic 35.0%
TAACTTTGTGTGTTCTTGAC+AGG - chr1.3:50653402-50653421 MS.gene036149:intron 35.0%
TAGGTAACCATTAGCATAGT+AGG + chr1.3:50654145-50654164 None:intergenic 35.0%
TGGAAATTGTCTTCGGAAAA+TGG - chr1.3:50654484-50654503 MS.gene036149:intron 35.0%
! AGTGCTGGAGTATGTAAAAT+TGG - chr1.3:50654387-50654406 MS.gene036149:CDS 35.0%
!! CTTGATTTTGTTTCTTCAGG+GGG - chr1.3:50654053-50654072 MS.gene036149:intron 35.0%
!!! CTTAAGCTAGTTTTTGCGTT+TGG - chr1.3:50654664-50654683 MS.gene036149:CDS 35.0%
AAAACGGTTGGACATACCTA+GGG + chr1.3:50653547-50653566 None:intergenic 40.0%
AAAATTAAGGCTTATGCCGC+TGG + chr1.3:50653076-50653095 None:intergenic 40.0%
AAGAGGAAATGTTCTGCTAG+AGG - chr1.3:50653243-50653262 MS.gene036149:intron 40.0%
AATGCCATTGCTCAAAGAAG+AGG - chr1.3:50653301-50653320 MS.gene036149:intron 40.0%
ATCAGAATTCACAGCACAAG+AGG - chr1.3:50653226-50653245 MS.gene036149:intron 40.0%
ATCTCAAGCCAATCACATAG+AGG + chr1.3:50654256-50654275 None:intergenic 40.0%
ATTTCCTCCTTGAGCATAGA+CGG - chr1.3:50653144-50653163 MS.gene036149:intron 40.0%
GATTACTCATGGAGGAAGTA+CGG - chr1.3:50653494-50653513 MS.gene036149:CDS 40.0%
GGAAAACACACTTTCTATGG+TGG - chr1.3:50654685-50654704 MS.gene036149:CDS 40.0%
GGAAGTTCCTTCCATTTGAT+TGG - chr1.3:50653186-50653205 MS.gene036149:intron 40.0%
TCCATGAGTAATCATCAGGA+GGG + chr1.3:50653487-50653506 None:intergenic 40.0%
TGGGGAGTCGTTTATTTAGA+GGG - chr1.3:50654343-50654362 MS.gene036149:CDS 40.0%
TGTGAAGACCTCTATGTGAT+TGG - chr1.3:50654245-50654264 MS.gene036149:intron 40.0%
TTCCTCCATGAGTAATCATC+AGG + chr1.3:50653491-50653510 None:intergenic 40.0%
TTGGGGAGTCGTTTATTTAG+AGG - chr1.3:50654342-50654361 MS.gene036149:CDS 40.0%
! ATATTTCAAGTGATGCGAGC+AGG - chr1.3:50654286-50654305 MS.gene036149:intron 40.0%
! ATTACTCATGGAGGAAGTAC+GGG - chr1.3:50653495-50653514 MS.gene036149:CDS 40.0%
! GACTGCAGATTTTGCCTTTT+GGG - chr1.3:50654308-50654327 MS.gene036149:intron 40.0%
! TGATTGATGTACTAGCCTGT+GGG - chr1.3:50653733-50653752 MS.gene036149:CDS 40.0%
! TGTGAAGCTTCCTTTTGTAG+TGG - chr1.3:50654725-50654744 MS.gene036149:CDS 40.0%
!! TTTTGGGTAGTAGCTTGGTT+GGG - chr1.3:50654324-50654343 MS.gene036149:CDS 40.0%
AGATCGGAGCTCCAATCAAA+TGG + chr1.3:50653200-50653219 None:intergenic 45.0%
ATGTTCTGCTAGAGGTGATG+AGG - chr1.3:50653251-50653270 MS.gene036149:intron 45.0%
CAAAACGGTTGGACATACCT+AGG + chr1.3:50653548-50653567 None:intergenic 45.0%
CAACCAAGCTACTACCCAAA+AGG + chr1.3:50654325-50654344 None:intergenic 45.0%
CACCAACAATGTCGTCTACT+AGG - chr1.3:50653115-50653134 MS.gene036149:intron 45.0%
CATGCAGTTCATGCATTTGC+AGG + chr1.3:50654205-50654224 None:intergenic 45.0%
CATGCATTTGCAGGTTGTGT+TGG + chr1.3:50654196-50654215 None:intergenic 45.0%
CTCCATGAGTAATCATCAGG+AGG + chr1.3:50653488-50653507 None:intergenic 45.0%
CTCCTGATGATTACTCATGG+AGG - chr1.3:50653486-50653505 MS.gene036149:CDS 45.0%
CTGCAAATGCATGAACTGCA+TGG - chr1.3:50654203-50654222 MS.gene036149:intron 45.0%
GACCTAGTAGACGACATTGT+TGG + chr1.3:50653120-50653139 None:intergenic 45.0%
GGATGAGCCTACTATGCTAA+TGG - chr1.3:50654135-50654154 MS.gene036149:intron 45.0%
GTCTGTCACACCACTACAAA+AGG + chr1.3:50654738-50654757 None:intergenic 45.0%
GTGATTATGCTCGCCTTCAT+AGG + chr1.3:50654164-50654183 None:intergenic 45.0%
TATAAGTGCAGCAGCATGAG+AGG - chr1.3:50654079-50654098 MS.gene036149:intron 45.0%
TCCCTCCTGATGATTACTCA+TGG - chr1.3:50653483-50653502 MS.gene036149:CDS 45.0%
TGCTATCAGCAACAAGCTTG+CGG - chr1.3:50653457-50653476 MS.gene036149:CDS 45.0%
TGTTCTGCTAGAGGTGATGA+GGG - chr1.3:50653252-50653271 MS.gene036149:intron 45.0%
TTGTAGTGGTGTGACAGACA+AGG - chr1.3:50654739-50654758 MS.gene036149:CDS 45.0%
TTTGGGTAGTAGCTTGGTTG+GGG - chr1.3:50654325-50654344 MS.gene036149:CDS 45.0%
! CTGATTGATGTACTAGCCTG+TGG - chr1.3:50653732-50653751 MS.gene036149:CDS 45.0%
! GATTGATGTACTAGCCTGTG+GGG - chr1.3:50653734-50653753 MS.gene036149:CDS 45.0%
! GGACTGCAGATTTTGCCTTT+TGG - chr1.3:50654307-50654326 MS.gene036149:intron 45.0%
! GGATATCTTGTTGCTGCTTC+AGG - chr1.3:50654760-50654779 MS.gene036149:CDS 45.0%
!! CTTTTGGGTAGTAGCTTGGT+TGG - chr1.3:50654323-50654342 MS.gene036149:CDS 45.0%
!! GAAGATCACTGGTTTAGTGC+TGG - chr1.3:50654372-50654391 MS.gene036149:CDS 45.0%
!! TTGCCTTTTGGGTAGTAGCT+TGG - chr1.3:50654319-50654338 MS.gene036149:CDS 45.0%
ATGTTCCGAAGGAACACCAG+CGG - chr1.3:50653057-50653076 MS.gene036149:CDS 50.0%
CGGAGCTCCAATCAAATGGA+AGG + chr1.3:50653196-50653215 None:intergenic 50.0%
GAGGGAGTGATGAAGATCAC+TGG - chr1.3:50654361-50654380 MS.gene036149:CDS 50.0%
GCTCAACATGCTTCCTAGCA+GGG + chr1.3:50654108-50654127 None:intergenic 50.0%
TACGGGCAGAAGCCTATCAA+GGG - chr1.3:50653512-50653531 MS.gene036149:intron 50.0%
TTATGCCGCTGGTGTTCCTT+CGG + chr1.3:50653065-50653084 None:intergenic 50.0%
! CTGCTAGGAAGCATGTTGAG+CGG - chr1.3:50654107-50654126 MS.gene036149:intron 50.0%
! TGCAGGTTGTGTTGGTACCT+TGG + chr1.3:50654188-50654207 None:intergenic 50.0%
!! GCAAGCTTGTTGCTGATAGC+AGG + chr1.3:50653458-50653477 None:intergenic 50.0%
AGGCGAGCATAATCACGCCA+AGG - chr1.3:50654168-50654187 MS.gene036149:intron 55.0%
CACGCTTCCGTCTATGCTCA+AGG + chr1.3:50653154-50653173 None:intergenic 55.0%
CGCTCAACATGCTTCCTAGC+AGG + chr1.3:50654109-50654128 None:intergenic 55.0%
CTTGAGCATAGACGGAAGCG+TGG - chr1.3:50653152-50653171 MS.gene036149:intron 55.0%
GAAGCATGTTGAGCGGTGCT+TGG - chr1.3:50654114-50654133 MS.gene036149:intron 55.0%
GCTTCCGTCTATGCTCAAGG+AGG + chr1.3:50653151-50653170 None:intergenic 55.0%
GGTTGGACATACCTAGGGTG+AGG + chr1.3:50653542-50653561 None:intergenic 55.0%
GTACGGGCAGAAGCCTATCA+AGG - chr1.3:50653511-50653530 MS.gene036149:intron 55.0%
TCAGGATGCAGTGGCTGTGA+AGG - chr1.3:50654778-50654797 MS.gene036149:CDS 55.0%
! GTTGCTGCTTCAGGATGCAG+TGG - chr1.3:50654769-50654788 MS.gene036149:CDS 55.0%
GGGTGAGGAGAGCCCTTGAT+AGG + chr1.3:50653527-50653546 None:intergenic 60.0%
TCAAGGGCTCTCCTCACCCT+AGG - chr1.3:50653528-50653547 MS.gene036149:intron 60.0%
! AGACGGAAGCGTGGCTAACG+TGG - chr1.3:50653161-50653180 MS.gene036149:intron 60.0%
! GGAAGCGTGGCTAACGTGGA+TGG - chr1.3:50653165-50653184 MS.gene036149:intron 60.0%
GCATGAGAGGCTGCCCTGCT+AGG - chr1.3:50654092-50654111 MS.gene036149:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 50653054 50654805 50653054 ID=MS.gene036149
chr1.3 mRNA 50653054 50654805 50653054 ID=MS.gene036149.t1;Parent=MS.gene036149
chr1.3 exon 50654537 50654805 50654537 ID=MS.gene036149.t1.exon1;Parent=MS.gene036149.t1
chr1.3 CDS 50654537 50654805 50654537 ID=cds.MS.gene036149.t1;Parent=MS.gene036149.t1
chr1.3 exon 50654310 50654435 50654310 ID=MS.gene036149.t1.exon2;Parent=MS.gene036149.t1
chr1.3 CDS 50654310 50654435 50654310 ID=cds.MS.gene036149.t1;Parent=MS.gene036149.t1
chr1.3 exon 50653670 50653787 50653670 ID=MS.gene036149.t1.exon3;Parent=MS.gene036149.t1
chr1.3 CDS 50653670 50653787 50653670 ID=cds.MS.gene036149.t1;Parent=MS.gene036149.t1
chr1.3 exon 50653437 50653522 50653437 ID=MS.gene036149.t1.exon4;Parent=MS.gene036149.t1
chr1.3 CDS 50653437 50653522 50653437 ID=cds.MS.gene036149.t1;Parent=MS.gene036149.t1
chr1.3 exon 50653054 50653114 50653054 ID=MS.gene036149.t1.exon5;Parent=MS.gene036149.t1
chr1.3 CDS 50653054 50653114 50653054 ID=cds.MS.gene036149.t1;Parent=MS.gene036149.t1
Gene Sequence

>MS.gene036149

ATGATGTTCCGAAGGAACACCAGCGGCATAAGCCTTAATTTTGACAAGGCTACTAGCAGCACACCAACAATGTCGTCTACTAGGTCTTTCATTTCCTCCTTGAGCATAGACGGAAGCGTGGCTAACGTGGATGGAAGTTCCTTCCATTTGATTGGAGCTCCGATCTCTTCAGATCAGAATTCACAGCACAAGAGGAAATGTTCTGCTAGAGGTGATGAGGGAAGCTTGAAATGTAGTAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGTAATTCTAATGGTTGATACATTAATGGTTAATTTCTGTTACTTTAAAGGTTTAACAAACCATTGTAATATGATATTAATAACTTTGTGTGTTCTTGACAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCTATCAGCAACAAGCTTGCGGATATCCCTCCTGATGATTACTCATGGAGGAAGTACGGGCAGAAGCCTATCAAGGGCTCTCCTCACCCTAGGTATGTCCAACCGTTTTGCTATTTGAGATTTAATTTTATTGATTCGATTCAAGGAGCAAATGAATATGACTGTGCTGTGATAAACAATAATTTTATAAAACTTCTGAACTATTTTGTTATGCTGCTTGGTGTACATTTATGATTTTATCTTCTTTTGTGTCATTATAGTATGTTGACATGATCTGATTGATGTACTAGCCTGTGGGGATTTAAATAATTTTGGTCTATGTGTGGATATGTAATATGTTGATTGGAGTTCTGCTAATATATTCCTTTGTCCATGTTTGTAATTTTCATTACAAATATCATATTGACAGTTCCATATGTTCGATAGCCCTTTTTTTTTTAACTTGAAAACATGTTTGAGAAATCGATTTTGCAATTTTGATGCTCTAGGTGTAAAATTTATGCTCCATTATTTGCACATTATTGTCAATCAAATGAAGGTGAAATCTGAACTACAACTCTACAAGTTTTATGTGTGATGAAACTGATTGTAATGTCTTGATTTTGTTTCTTCAGGGGGTATTATAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGCGGTGCTTGGATGAGCCTACTATGCTAATGGTTACCTATGAAGGCGAGCATAATCACGCCAAGGTACCAACACAACCTGCAAATGCATGAACTGCATGGAGAGTCCCGTCATTCTATTTGTGAAGACCTCTATGTGATTGGCTTGAGATGTTTCTGTACATATTTCAAGTGATGCGAGCAGGACTGCAGATTTTGCCTTTTGGGTAGTAGCTTGGTTGGGGAGTCGTTTATTTAGAGGGAGTGATGAAGATCACTGGTTTAGTGCTGGAGTATGTAAAATTGGATAGTTTCAATTCGTAAGAACAATTTTATTTTTCTTTAGTATGTTATTAAACATTTCAGGGTTCTCTAAATTAATGGAAATTGTCTTCGGAAAATGGTTGAGTTCTTTCAATTTTGTTTTTTCGAATCAAGGTTCTAGCAAATTGATTGTCATAGTGATATACAGCACAACAATTGATTCTAGTAACTATAAGTATCACATAATCTATGTGCGTATACATAGTATGGTTATCTTTGTTTTGGGTGTTAAAACAGCTTAAGCTAGTTTTTGCGTTTGGAAAACACACTTTCTATGGTGGTATTGCTTTGCATTCAATGTGAAGCTTCCTTTTGTAGTGGTGTGACAGACAAGGATATCTTGTTGCTGCTTCAGGATGCAGTGGCTGTGAAGGATTAA
Protein sequence

>MS.gene036149.t1

MMFRRNTSGISLNFDKATSSTPTMSSTRSFISSLSIDGSVANVDGSSFHLIGAPISSDQNSQHKRKCSARGDEGSLKCSSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLDEPTMLMVTYEGEHNHAKLGWGVVYLEGVMKITGLVLEYVKLDSFNSGVTDKDILLLLQDAVAVKD