AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036183

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036183.t1 MTR_2g099990 53.665 382 140 10 6 370 1 362 2.72e-116 349
MS.gene036183.t1 MTR_8g017210 53.213 389 115 11 6 352 18 381 7.55e-116 349
MS.gene036183.t1 MTR_1g016010 55.987 309 100 6 35 343 37 309 1.37e-112 339
MS.gene036183.t1 MTR_4g059870 46.729 428 147 14 36 386 34 457 2.34e-108 329
MS.gene036183.t1 MTR_1g094115 64.259 263 69 7 40 296 47 290 9.47e-106 324
MS.gene036183.t1 MTR_2g093960 75.956 183 44 0 40 222 32 214 1.62e-105 319
MS.gene036183.t1 MTR_1g112270 69.756 205 53 2 43 239 47 250 2.03e-101 314
MS.gene036183.t1 MTR_2g090745 46.210 409 145 13 50 392 17 416 9.93e-100 305
MS.gene036183.t1 MTR_2g099990 55.591 313 113 9 64 370 1 293 7.07e-99 302
MS.gene036183.t1 MTR_1g112270 78.488 172 25 2 43 203 47 217 1.34e-97 304
MS.gene036183.t1 MTR_1g094115 57.795 263 69 8 40 296 47 273 3.06e-88 278
MS.gene036183.t1 MTR_2g017720 73.387 124 27 2 42 165 315 432 5.83e-54 186
MS.gene036183.t1 MTR_3g102000 66.000 100 26 3 67 162 36 131 1.13e-36 134
MS.gene036183.t1 MTR_5g030560 78.000 50 11 0 45 94 11 60 2.40e-21 88.2
MS.gene036183.t1 MTR_1g093095 35.172 145 80 5 61 193 107 249 3.07e-20 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036183.t1 AT4G02670 50.750 400 124 9 23 411 38 375 4.62e-121 358
MS.gene036183.t1 AT4G02670 50.750 400 124 9 23 411 36 373 4.94e-121 358
MS.gene036183.t1 AT3G50700 53.425 365 119 9 2 333 1 347 1.73e-113 341
MS.gene036183.t1 AT1G55110 73.059 219 51 4 6 216 21 239 1.18e-110 334
MS.gene036183.t1 AT1G55110 73.059 219 51 4 6 216 21 239 1.18e-110 334
MS.gene036183.t1 AT1G55110 73.059 219 51 4 6 216 21 239 1.18e-110 334
MS.gene036183.t1 AT5G03150 81.868 182 30 1 39 217 52 233 4.39e-108 329
MS.gene036183.t1 AT5G66730 70.089 224 54 4 2 221 1 215 6.72e-107 326
MS.gene036183.t1 AT3G45260 83.735 166 27 0 39 204 38 203 2.61e-106 322
MS.gene036183.t1 AT3G45260 83.735 166 27 0 39 204 38 203 2.61e-106 322
MS.gene036183.t1 AT1G03840 82.759 174 29 1 33 206 34 206 5.23e-106 324
MS.gene036183.t1 AT3G13810 85.629 167 24 0 37 203 48 214 6.80e-106 323
MS.gene036183.t1 AT3G13810 85.629 167 24 0 37 203 67 233 7.38e-106 323
MS.gene036183.t1 AT3G13810 85.629 167 24 0 37 203 67 233 7.38e-106 323
MS.gene036183.t1 AT3G13810 85.629 167 24 0 37 203 62 228 8.36e-106 323
MS.gene036183.t1 AT5G44160 54.572 339 114 11 19 326 20 349 3.30e-104 318
MS.gene036183.t1 AT1G14580 79.429 175 30 2 34 203 42 215 4.16e-103 315
MS.gene036183.t1 AT1G14580 79.429 175 30 2 34 203 42 215 4.16e-103 315
MS.gene036183.t1 AT5G60470 73.438 192 42 2 40 222 44 235 5.86e-103 314
MS.gene036183.t1 AT5G60470 73.438 192 42 2 40 222 40 231 8.54e-103 314
MS.gene036183.t1 AT1G14580 79.429 175 30 2 34 203 56 229 9.39e-103 315
MS.gene036183.t1 AT1G03840 81.609 174 29 2 33 206 34 204 3.22e-102 314
MS.gene036183.t1 AT2G02080 78.161 174 33 2 34 203 44 216 3.66e-102 314
MS.gene036183.t1 AT2G02080 78.161 174 33 2 34 203 44 216 3.66e-102 314
MS.gene036183.t1 AT2G02080 78.161 174 33 2 34 203 44 216 3.66e-102 314
MS.gene036183.t1 AT2G02080 78.161 174 33 2 34 203 44 216 3.66e-102 314
MS.gene036183.t1 AT2G02070 84.146 164 25 1 40 203 52 214 4.52e-101 314
MS.gene036183.t1 AT2G02070 84.146 164 25 1 40 203 52 214 4.52e-101 314
MS.gene036183.t1 AT3G13810 87.582 153 19 0 51 203 68 220 1.72e-98 304
MS.gene036183.t1 AT3G13810 87.582 153 19 0 51 203 82 234 1.95e-98 305
MS.gene036183.t1 AT5G44160 54.545 308 104 10 50 326 8 310 1.70e-95 294
MS.gene036183.t1 AT5G60470 72.376 181 41 2 51 222 46 226 3.23e-95 294
MS.gene036183.t1 AT2G02080 80.714 140 26 1 64 203 1 139 2.41e-86 271
MS.gene036183.t1 AT2G02080 80.714 140 26 1 64 203 1 139 2.41e-86 271
MS.gene036183.t1 AT2G01940 62.573 171 59 2 27 196 35 201 4.93e-75 242
MS.gene036183.t1 AT1G68130 64.103 156 55 1 40 194 41 196 8.37e-73 235
MS.gene036183.t1 AT1G25250 63.694 157 55 2 40 194 33 189 6.11e-72 232
MS.gene036183.t1 AT2G01940 61.628 172 60 3 27 196 35 202 1.68e-71 233
MS.gene036183.t1 AT1G25250 64.626 147 50 2 50 194 20 166 1.81e-68 222
MS.gene036183.t1 AT2G01940 62.500 112 41 1 86 196 1 112 1.04e-45 162
MS.gene036183.t1 AT1G68130 61.818 110 41 1 86 194 1 110 3.78e-45 160
MS.gene036183.t1 AT1G25250 60.360 111 42 2 86 194 1 111 1.57e-43 155
MS.gene036183.t1 AT5G22890 34.911 169 95 4 38 193 188 354 7.50e-24 102
MS.gene036183.t1 AT1G34370 35.443 158 89 4 49 193 14 171 1.35e-23 100
MS.gene036183.t1 AT1G34370 35.443 158 89 4 49 193 224 381 3.88e-23 102
MS.gene036183.t1 AT1G34370 35.443 158 89 4 49 193 224 381 3.88e-23 102
MS.gene036183.t1 AT1G13290 33.987 153 88 6 61 202 93 243 1.03e-19 89.7
MS.gene036183.t1 AT1G34790 36.000 150 85 5 53 193 129 276 6.05e-19 87.4
MS.gene036183.t1 AT1G08290 35.260 173 91 8 40 193 142 312 7.22e-19 87.8
MS.gene036183.t1 AT3G20880 34.507 142 82 5 61 193 248 387 9.19e-19 88.6
MS.gene036183.t1 AT3G57670 34.694 147 85 5 56 193 204 348 1.63e-18 87.4
MS.gene036183.t1 AT1G51220 33.803 142 83 5 61 193 170 309 4.08e-18 85.5

Find 123 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGGTTGGTGTGAAAATT+TGG 0.168178 1.3:+51265750 None:intergenic
GATGATGTCATTATGCTCTT+AGG 0.239488 1.3:+51265690 None:intergenic
TGATGTGGCTTTGTTGGTTT+TGG 0.242334 1.3:+51265850 None:intergenic
AGGCTGTTGTGAGGAATTTA+TGG 0.247540 1.3:+51268893 None:intergenic
GTGTGAAAATTTGGAGATTC+AGG 0.253132 1.3:+51265759 None:intergenic
TGGAAACTTTGTTGTTGATT+TGG 0.272173 1.3:+51265870 None:intergenic
AGGAAGAGAGATTGGACTAA+TGG 0.292623 1.3:+51265897 None:intergenic
GTTTGATGATGATGACTTAT+TGG 0.312377 1.3:+51265543 None:intergenic
GGAAACTTTGTTGTTGATTT+GGG 0.314994 1.3:+51265871 None:intergenic
TTGTGGTGGTGATGGCTAAT+TGG 0.316995 1.3:+51265928 None:intergenic
TTTGTTGCTAATAGTGTCTT+TGG 0.317163 1.3:+51268481 None:intergenic
GAGACCGTCGTCGTTCTTTC+CGG 0.318538 1.3:+51265434 None:intergenic
TTCTGAGAAAGAAGTGGAAT+TGG 0.320642 1.3:+51268959 None:intergenic
CCCAGGTGATGTGGCTTTGT+TGG 0.325238 1.3:+51265844 None:intergenic
GAGCTCAACATTGGCCAGTT+TGG 0.328314 1.3:-51265516 MS.gene036183:CDS
TTGGGAAGAGGAAGAGAGAT+TGG 0.331874 1.3:+51265889 None:intergenic
GACTAATGGGTTTGTGTTTG+TGG 0.349306 1.3:+51265911 None:intergenic
CAGTCACAACAAGCAGGTTT+TGG 0.351112 1.3:-51265273 MS.gene036183:CDS
TGTGGTGGAGAGTATTATTA+AGG 0.363128 1.3:+51265790 None:intergenic
AGGGCTCTTGGAGATCTTAC+AGG 0.369272 1.3:-51268286 MS.gene036183:CDS
GGTCTCACGAGGGACTTTCT+TGG 0.373376 1.3:-51265417 MS.gene036183:CDS
CTAGGGTTAGGGTTTGGTTG+AGG 0.381467 1.3:+51265816 None:intergenic
GGAAGAGAGATTGGACTAAT+GGG 0.383729 1.3:+51265898 None:intergenic
ATGATGTCATTATGCTCTTA+GGG 0.385655 1.3:+51265691 None:intergenic
TTATTAAGGTTGCTAGGGTT+AGG 0.389295 1.3:+51265804 None:intergenic
CTTACCAACGGCGGAGGAAA+TGG 0.400342 1.3:-51265393 MS.gene036183:CDS
TCTATGCTGTTCATTCTGAT+TGG 0.408547 1.3:-51268198 MS.gene036183:CDS
TATTAGTTACCTGGGTTACC+AGG 0.411020 1.3:+51268843 None:intergenic
TTTGATGAGGTTGGTGTTGG+TGG 0.413230 1.3:+51265316 None:intergenic
ACCAACAAAGCCACATCACC+TGG 0.418644 1.3:-51265845 MS.gene036183:CDS
AGGACAGCTTCATAACTCAT+AGG 0.419863 1.3:-51265998 MS.gene036183:CDS
GGGTTAGGGTTTGGTTGAGG+TGG 0.424046 1.3:+51265819 None:intergenic
TATTAAGGTTGCTAGGGTTA+GGG 0.426783 1.3:+51265805 None:intergenic
CATAACCCTTCAAGGGCTCT+TGG 0.427551 1.3:-51268298 MS.gene036183:CDS
AGGAGGCTGAGAAGAGAGGT+TGG 0.428318 1.3:+51265737 None:intergenic
CATTTCCTCCGCCGTTGGTA+AGG 0.428942 1.3:+51265394 None:intergenic
GGTTAGGGTTTGGTTGAGGT+GGG 0.430124 1.3:+51265820 None:intergenic
AAAGCTATCACTTCAGCATC+AGG 0.433390 1.3:+51268508 None:intergenic
TTCCTTTGCTTCAACTTCCA+TGG 0.449693 1.3:+51268379 None:intergenic
AGAGTATTATTAAGGTTGCT+AGG 0.450934 1.3:+51265798 None:intergenic
TTTGTTGTTGATTTGGGAAG+AGG 0.451023 1.3:+51265877 None:intergenic
GTTTGGTTGAGGTGGGTCCC+AGG 0.454878 1.3:+51265827 None:intergenic
GTTTGTGTTTGTGGTGGTGA+TGG 0.463157 1.3:+51265920 None:intergenic
AGGTTGCTAGGGTTAGGGTT+TGG 0.463790 1.3:+51265810 None:intergenic
GTGTTCATCATAACCCTTCA+AGG 0.465914 1.3:-51268306 MS.gene036183:CDS
TTTGCTTCAACTTCCATGGT+AGG 0.474534 1.3:+51268383 None:intergenic
GTGTGGTGACATGGCAGCAC+TGG 0.477358 1.3:+51265635 None:intergenic
GCTGAGTCACTGATCCAAAC+TGG 0.481577 1.3:+51265502 None:intergenic
GTCGGTGCCGCCGCCATCAC+AGG 0.486782 1.3:-51265576 MS.gene036183:CDS
AAGGATATGCTAACATTCAC+AGG 0.488242 1.3:-51265351 MS.gene036183:CDS
GAGATTCAGGCTTGATGTTG+TGG 0.492741 1.3:+51265772 None:intergenic
GGGTTTGTGTGATGAAGAAA+TGG 0.496225 1.3:+51265711 None:intergenic
AGGAAATGGTGGTGAGTCCT+TGG 0.504475 1.3:-51265379 MS.gene036183:CDS
TTTATATTCTCTAGTACCAC+AGG 0.507908 1.3:+51268159 None:intergenic
GAGTATTATTAAGGTTGCTA+GGG 0.512977 1.3:+51265799 None:intergenic
TGTTTCTTCTGAGAAAGAAG+TGG 0.516927 1.3:+51268953 None:intergenic
GTGGAATTGGACATTAGTGC+AGG 0.522525 1.3:+51268972 None:intergenic
GATGATGACTTATTGGTGGT+TGG 0.524796 1.3:+51265550 None:intergenic
TGATGATGATGACTTATTGG+TGG 0.525880 1.3:+51265546 None:intergenic
TGGTGGTTGGCTGCCTGTGA+TGG 0.526594 1.3:+51265563 None:intergenic
AACATGAGAGGCTGCCTCAC+CGG 0.528047 1.3:-51265453 MS.gene036183:CDS
GTGTGTGAGATCTGCAACAA+GGG 0.528425 1.3:-51268451 MS.gene036183:CDS
GAGGTGGGTCCCAGGTGATG+TGG 0.529471 1.3:+51265835 None:intergenic
GTAGAGGAGGCTGAGAAGAG+AGG 0.530169 1.3:+51265733 None:intergenic
CTTGGCCTTACCAACGGCGG+AGG 0.533245 1.3:-51265399 MS.gene036183:CDS
AACAACTGTTCCTGAGTCGT+GGG 0.538679 1.3:-51265238 MS.gene036183:CDS
AATTTATGGTTGAAACTAAG+TGG 0.539157 1.3:+51268907 None:intergenic
ACCACCATTTCCTCCGCCGT+TGG 0.540479 1.3:+51265389 None:intergenic
GTCCTCTCCTATGTAGCTGT+AGG 0.540553 1.3:+51268410 None:intergenic
TGTGATGGCGGCGGCACCGA+CGG 0.547521 1.3:+51265578 None:intergenic
GACTTTCTTGGCCTTACCAA+CGG 0.550956 1.3:-51265405 MS.gene036183:CDS
CAACAACTGTTCCTGAGTCG+TGG 0.554359 1.3:-51265239 MS.gene036183:CDS
CAAACCTCTGAGCTCAACAT+TGG 0.555204 1.3:-51265525 MS.gene036183:CDS
ATCAAAACCTACAGCTACAT+AGG 0.556033 1.3:-51268417 MS.gene036183:CDS
AGATCTCCAAGAGCCCTTGA+AGG 0.557730 1.3:+51268292 None:intergenic
TGCTGAGAGGTGTGGTGACA+TGG 0.562477 1.3:+51265626 None:intergenic
TAATGGGTTTGTGTTTGTGG+TGG 0.568535 1.3:+51265914 None:intergenic
TAGCATATCCTTTACATCCA+AGG 0.571843 1.3:+51265362 None:intergenic
TTGGCTGCCTGTGATGGCGG+CGG 0.574963 1.3:+51265569 None:intergenic
AGAAGCCTCCCTGGTAACCC+AGG 0.574987 1.3:-51268852 MS.gene036183:intron
TGATGAACACATGAAGGCTC+AGG 0.575160 1.3:+51268319 None:intergenic
GGACAGCTTCATAACTCATA+GGG 0.576087 1.3:-51265997 MS.gene036183:CDS
GTGTGATGAAGAAATGGTAG+AGG 0.576408 1.3:+51265717 None:intergenic
AAGGTTGTTGTGTGCTGACG+TGG 0.578429 1.3:+51265661 None:intergenic
AGAGAATATAAATGTGATTG+TGG 0.579986 1.3:-51268148 MS.gene036183:CDS
TACCATGGAAGTTGAAGCAA+AGG 0.582854 1.3:-51268381 MS.gene036183:CDS
TGGTTGGCTGCCTGTGATGG+CGG 0.588921 1.3:+51265566 None:intergenic
TGGTGAGTCCTTGGATGTAA+AGG 0.590221 1.3:-51265370 MS.gene036183:CDS
GTTGTTAATGTAGTGATCAA+CGG 0.595265 1.3:+51265473 None:intergenic
GGGTTATGATGAACACATGA+AGG 0.597360 1.3:+51268313 None:intergenic
GATCTCCAAGAGCCCTTGAA+GGG 0.598968 1.3:+51268293 None:intergenic
TGTTGTGTGCTGACGTGGAA+GGG 0.607996 1.3:+51265666 None:intergenic
AAGTCACAGTCACAACAAGC+AGG 0.612011 1.3:-51265279 MS.gene036183:CDS
TTGTTGTGTGCTGACGTGGA+AGG 0.613233 1.3:+51265665 None:intergenic
CTGGCCAATGTTGAGCTCAG+AGG 0.614671 1.3:+51265521 None:intergenic
GACATGGCAGCACTGGAAGA+AGG 0.615895 1.3:+51265642 None:intergenic
ATTAGTTACCTGGGTTACCA+GGG 0.616252 1.3:+51268844 None:intergenic
GGAGAGGACATAACCTACCA+TGG 0.621627 1.3:-51268396 MS.gene036183:CDS
AGAACGACGACGGTCTCACG+AGG 0.626644 1.3:-51265428 MS.gene036183:CDS
TGTTCATCATAACCCTTCAA+GGG 0.626799 1.3:-51268305 MS.gene036183:CDS
GGAGAAGAGCAGTTGCTGAG+AGG 0.629994 1.3:+51265613 None:intergenic
ATTCAGGCTTGATGTTGTGG+TGG 0.630169 1.3:+51265775 None:intergenic
CACTACATTAACAACATGAG+AGG 0.631695 1.3:-51265465 MS.gene036183:CDS
ACCAACGGCGGAGGAAATGG+TGG 0.634537 1.3:-51265390 MS.gene036183:CDS
AAACATTATAGTAGAAAACA+TGG 0.647572 1.3:-51268256 MS.gene036183:CDS
CGTCGTCGTTCTTTCCGGTG+AGG 0.652249 1.3:+51265439 None:intergenic
AGTTACCTGGGTTACCAGGG+AGG 0.652361 1.3:+51268847 None:intergenic
ACAACTGTTCCTGAGTCGTG+GGG 0.654552 1.3:-51265237 MS.gene036183:CDS
AGGATATGCTAACATTCACA+GGG 0.658162 1.3:-51265350 MS.gene036183:CDS
CCAACAAAGCCACATCACCT+GGG 0.660119 1.3:-51265844 MS.gene036183:CDS
TGATGAAGAAATGGTAGAGG+AGG 0.664055 1.3:+51265720 None:intergenic
TGGAATTGGACATTAGTGCA+GGG 0.664460 1.3:+51268973 None:intergenic
AACCTACAGCTACATAGGAG+AGG 0.665795 1.3:-51268412 MS.gene036183:CDS
AGAGCAGTTGCTGAGAGGTG+TGG 0.668565 1.3:+51265618 None:intergenic
TGTGTGTGAGATCTGCAACA+AGG 0.672147 1.3:-51268452 MS.gene036183:CDS
CAACTGTTCCTGAGTCGTGG+GGG 0.675581 1.3:-51265236 MS.gene036183:CDS
GAAGCAAAGGAACAACAAAG+AGG 0.688495 1.3:-51268368 MS.gene036183:CDS
TTTCTTGGCCTTACCAACGG+CGG 0.703626 1.3:-51265402 MS.gene036183:CDS
AAAGCTCACTCTAAAACCTG+TGG 0.713942 1.3:-51268175 MS.gene036183:CDS
GAACGACGACGGTCTCACGA+GGG 0.715036 1.3:-51265427 MS.gene036183:CDS
CTCACCGGAAAGAACGACGA+CGG 0.728864 1.3:-51265438 MS.gene036183:CDS
GATATGCTAACATTCACAGG+GGG 0.759370 1.3:-51265348 MS.gene036183:CDS
GGATATGCTAACATTCACAG+GGG 0.776190 1.3:-51265349 MS.gene036183:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATAATATTATGTTGA+AGG + chr1.3:51267355-51267374 None:intergenic 10.0%
!! TAAAAATTCATAAATGAATT+GGG - chr1.3:51267700-51267719 MS.gene036183:intron 10.0%
!! TTAAAAATTCATAAATGAAT+TGG - chr1.3:51267699-51267718 MS.gene036183:intron 10.0%
!! AAAAGAATAATTATGAAAAC+AGG + chr1.3:51266528-51266547 None:intergenic 15.0%
!! ATAGAAACATAAGAAAAAAA+TGG + chr1.3:51266191-51266210 None:intergenic 15.0%
!! ATTTATAACATGTTAAATTG+TGG - chr1.3:51265404-51265423 MS.gene036183:CDS 15.0%
!! TGGATTAATTTAATAAAACA+TGG + chr1.3:51266171-51266190 None:intergenic 15.0%
!!! CAAATCATAATTTTAAATTG+CGG - chr1.3:51266238-51266257 MS.gene036183:intron 15.0%
!!! TCATTTATGAATTTTTAACA+TGG + chr1.3:51267697-51267716 None:intergenic 15.0%
!!! TCTTTAAAACATTTATATTG+CGG + chr1.3:51266282-51266301 None:intergenic 15.0%
!! AAACATTATAGTAGAAAACA+TGG - chr1.3:51265949-51265968 MS.gene036183:CDS 20.0%
!! ATATTATGTTGAAGGATTAT+TGG + chr1.3:51267347-51267366 None:intergenic 20.0%
!! ATTTAATCTCTACCAAATTA+TGG + chr1.3:51266432-51266451 None:intergenic 20.0%
!! TAACTAAATAAATAACACCA+TGG - chr1.3:51268087-51268106 MS.gene036183:intron 20.0%
!! TAACTAATTATTAGTTACCT+GGG + chr1.3:51265373-51265392 None:intergenic 20.0%
!! TATACTAAACAATTGAACTA+AGG + chr1.3:51265630-51265649 None:intergenic 20.0%
!! TTAACTAATTATTAGTTACC+TGG + chr1.3:51265374-51265393 None:intergenic 20.0%
!!! AATGAATTTGATTTTGAGAA+GGG + chr1.3:51267627-51267646 None:intergenic 20.0%
!!! TAGTCTTATAATTATGATGA+TGG + chr1.3:51267319-51267338 None:intergenic 20.0%
!!! TGTTTTAAAGATTTGTGTAA+CGG - chr1.3:51266291-51266310 MS.gene036183:intron 20.0%
!!! TTACATGTGATTTTAAATTG+CGG + chr1.3:51265513-51265532 None:intergenic 20.0%
! AACATAATTTATGTCCCAAT+TGG - chr1.3:51267449-51267468 MS.gene036183:intron 25.0%
! AAGTTCAGAGAAAAATACTA+TGG + chr1.3:51267138-51267157 None:intergenic 25.0%
! AATTATGATTGGATAAATGC+AGG - chr1.3:51267814-51267833 MS.gene036183:intron 25.0%
! AATTTATGGTTGAAACTAAG+TGG + chr1.3:51265301-51265320 None:intergenic 25.0%
! AGAGAATATAAATGTGATTG+TGG - chr1.3:51266057-51266076 MS.gene036183:intron 25.0%
! ATAAAAAAGAGCCTCTAATA+TGG + chr1.3:51268068-51268087 None:intergenic 25.0%
! ATGCAGGATAATTTCAATTT+AGG - chr1.3:51267830-51267849 MS.gene036183:intron 25.0%
! CAGTAGTAGATAAAAACAAA+AGG + chr1.3:51266761-51266780 None:intergenic 25.0%
! CCTAAAAAGGTTTATTACTA+GGG + chr1.3:51267882-51267901 None:intergenic 25.0%
! CCTCAAAATCCTTTATATTA+TGG - chr1.3:51265464-51265483 MS.gene036183:CDS 25.0%
! CTTTCATGAAACAATTTCAA+GGG + chr1.3:51266595-51266614 None:intergenic 25.0%
! TAGATGACTCAAATTATGAT+TGG - chr1.3:51267803-51267822 MS.gene036183:intron 25.0%
! TATACACTCTTATGTTGATA+TGG - chr1.3:51266977-51266996 MS.gene036183:intron 25.0%
! TGCAGGATAATTTCAATTTA+GGG - chr1.3:51267831-51267850 MS.gene036183:intron 25.0%
!! CCATAATATAAAGGATTTTG+AGG + chr1.3:51265467-51265486 None:intergenic 25.0%
!! CCTAGTAATAAACCTTTTTA+GGG - chr1.3:51267880-51267899 MS.gene036183:intron 25.0%
!! TGTTTTCTGAATCCTAAAAA+AGG - chr1.3:51266686-51266705 MS.gene036183:intron 25.0%
!! TTCCAATTTTAAATGTGTCA+GGG - chr1.3:51266913-51266932 MS.gene036183:intron 25.0%
!! TTTAGGTTAATTTGGTTTAG+AGG - chr1.3:51267947-51267966 MS.gene036183:intron 25.0%
!! TTTCCAATTTTAAATGTGTC+AGG - chr1.3:51266912-51266931 MS.gene036183:intron 25.0%
!!! ATTGCTGTATTTTGAACAAT+CGG - chr1.3:51267726-51267745 MS.gene036183:intron 25.0%
!!! CAATGAATTTGATTTTGAGA+AGG + chr1.3:51267628-51267647 None:intergenic 25.0%
!!! CTAGACTTTTTAGGTTAATT+TGG - chr1.3:51267939-51267958 MS.gene036183:intron 25.0%
!!! TACTAGTACATTTTAGAGAA+GGG - chr1.3:51267909-51267928 MS.gene036183:intron 25.0%
!!! TCTTATAATTATGATGATGG+TGG + chr1.3:51267316-51267335 None:intergenic 25.0%
AACAATAAGGCAAATGCAAT+CGG + chr1.3:51266326-51266345 None:intergenic 30.0%
AATTATGGTAAATACACCGT+AGG + chr1.3:51266417-51266436 None:intergenic 30.0%
ACGGTGTATTTACCATAATT+TGG - chr1.3:51266417-51266436 MS.gene036183:intron 30.0%
AGTACTATACCTGGAAAAAA+GGG + chr1.3:51266085-51266104 None:intergenic 30.0%
ATAACTTCATTACAGTGGAT+TGG - chr1.3:51267221-51267240 MS.gene036183:intron 30.0%
ATGATGTCATTATGCTCTTA+GGG + chr1.3:51268517-51268536 None:intergenic 30.0%
ATTCTAGTCTCTTTAGCAAT+TGG + chr1.3:51266656-51266675 None:intergenic 30.0%
CCCTAAAAAGGTTTATTACT+AGG + chr1.3:51267883-51267902 None:intergenic 30.0%
CCTTGAAATTGTTTCATGAA+AGG - chr1.3:51266593-51266612 MS.gene036183:intron 30.0%
CCTTTCATGAAACAATTTCA+AGG + chr1.3:51266596-51266615 None:intergenic 30.0%
CTTCTATAACTTCATTACAG+TGG - chr1.3:51267216-51267235 MS.gene036183:intron 30.0%
GAAAACATGGTGAGAAAAAA+TGG - chr1.3:51265962-51265981 MS.gene036183:CDS 30.0%
GAGTATTATTAAGGTTGCTA+GGG + chr1.3:51268409-51268428 None:intergenic 30.0%
GGGACATAAATTATGTTACA+GGG + chr1.3:51267446-51267465 None:intergenic 30.0%
GTTGTTAATGTAGTGATCAA+CGG + chr1.3:51268735-51268754 None:intergenic 30.0%
TAAAAACACAAGTGACATGT+TGG - chr1.3:51268015-51268034 MS.gene036183:intron 30.0%
TAGTACTATACCTGGAAAAA+AGG + chr1.3:51266086-51266105 None:intergenic 30.0%
TGGGACATAAATTATGTTAC+AGG + chr1.3:51267447-51267466 None:intergenic 30.0%
TTGAATCAAGACCATATTAG+AGG - chr1.3:51268054-51268073 MS.gene036183:intron 30.0%
TTGCAGCACAATAAACAATA+AGG + chr1.3:51266339-51266358 None:intergenic 30.0%
TTGCATCATACTTATAACCA+TGG + chr1.3:51268107-51268126 None:intergenic 30.0%
TTTATATTCTCTAGTACCAC+AGG + chr1.3:51266049-51266068 None:intergenic 30.0%
TTTGTTGCTAATAGTGTCTT+TGG + chr1.3:51265727-51265746 None:intergenic 30.0%
! AGAGTATTATTAAGGTTGCT+AGG + chr1.3:51268410-51268429 None:intergenic 30.0%
! AGATAAAAACAAAAGGTGTG+TGG + chr1.3:51266754-51266773 None:intergenic 30.0%
! CCCTAGTAATAAACCTTTTT+AGG - chr1.3:51267879-51267898 MS.gene036183:intron 30.0%
! CTAATATGGTCTTGATTCAA+TGG + chr1.3:51268054-51268073 None:intergenic 30.0%
! TTTTATTGTGTGAAAACTGC+AGG - chr1.3:51268183-51268202 MS.gene036183:CDS 30.0%
!! CTACTAGTACATTTTAGAGA+AGG - chr1.3:51267908-51267927 MS.gene036183:intron 30.0%
!! GGAAACTTTGTTGTTGATTT+GGG + chr1.3:51268337-51268356 None:intergenic 30.0%
!! GTCACTTGTGTTTTTATTGA+GGG + chr1.3:51268011-51268030 None:intergenic 30.0%
!! GTTTGATGATGATGACTTAT+TGG + chr1.3:51268665-51268684 None:intergenic 30.0%
!! TCACTTGTGTTTTTATTGAG+GGG + chr1.3:51268010-51268029 None:intergenic 30.0%
!! TGGAAACTTTGTTGTTGATT+TGG + chr1.3:51268338-51268357 None:intergenic 30.0%
!! TGTCACTTGTGTTTTTATTG+AGG + chr1.3:51268012-51268031 None:intergenic 30.0%
!!! ACATTCATTTGGCCTTTTTT+AGG + chr1.3:51266701-51266720 None:intergenic 30.0%
!!! ATAGTTTTAGGTTACGATTG+CGG + chr1.3:51266394-51266413 None:intergenic 30.0%
!!! CTTTTTTTCTTGGACTTTTG+AGG + chr1.3:51265335-51265354 None:intergenic 30.0%
AAAAAGGCCAAATGAATGTG+CGG - chr1.3:51266702-51266721 MS.gene036183:intron 35.0%
AAGGATATGCTAACATTCAC+AGG - chr1.3:51268854-51268873 MS.gene036183:CDS 35.0%
ACTCTTATGTTGATATGGAG+TGG - chr1.3:51266982-51267001 MS.gene036183:intron 35.0%
AGAACTTCACAAGTCTTCTT+TGG - chr1.3:51267572-51267591 MS.gene036183:intron 35.0%
AGCAGTAATAGTACTATACC+TGG + chr1.3:51266094-51266113 None:intergenic 35.0%
AGGATATGCTAACATTCACA+GGG - chr1.3:51268855-51268874 MS.gene036183:CDS 35.0%
ATCAAAACCTACAGCTACAT+AGG - chr1.3:51265788-51265807 MS.gene036183:CDS 35.0%
CACTACATTAACAACATGAG+AGG - chr1.3:51268740-51268759 MS.gene036183:intron 35.0%
CGTAACCTAAAACTATCCTA+CGG - chr1.3:51266398-51266417 MS.gene036183:intron 35.0%
CTCTTATGTTGATATGGAGT+GGG - chr1.3:51266983-51267002 MS.gene036183:intron 35.0%
GAAATCATGCATGGGATAAA+GGG + chr1.3:51267519-51267538 None:intergenic 35.0%
GATGATGTCATTATGCTCTT+AGG + chr1.3:51268518-51268537 None:intergenic 35.0%
GTGTGAAAATTTGGAGATTC+AGG + chr1.3:51268449-51268468 None:intergenic 35.0%
GTTTGCATGCATAAAGCAAA+AGG - chr1.3:51267382-51267401 MS.gene036183:intron 35.0%
TAGCATATCCTTTACATCCA+AGG + chr1.3:51268846-51268865 None:intergenic 35.0%
TAGTTGCGGCCATAATATAA+AGG + chr1.3:51265476-51265495 None:intergenic 35.0%
TATGCATGATGCAATTGATG+TGG + chr1.3:51267412-51267431 None:intergenic 35.0%
TATTAAGGTTGCTAGGGTTA+GGG + chr1.3:51268403-51268422 None:intergenic 35.0%
TCTATGCTGTTCATTCTGAT+TGG - chr1.3:51266007-51266026 MS.gene036183:intron 35.0%
TCTGCAACTGTAATTAGTTG+CGG + chr1.3:51265490-51265509 None:intergenic 35.0%
TGAAAGGTTGCATGAAATTG+TGG - chr1.3:51266609-51266628 MS.gene036183:intron 35.0%
TGTTCATCATAACCCTTCAA+GGG - chr1.3:51265900-51265919 MS.gene036183:CDS 35.0%
TTATTAAGGTTGCTAGGGTT+AGG + chr1.3:51268404-51268423 None:intergenic 35.0%
TTTGCAACACAACAACAACT+AGG - chr1.3:51266367-51266386 MS.gene036183:intron 35.0%
! ATACACCGTAGGATAGTTTT+AGG + chr1.3:51266406-51266425 None:intergenic 35.0%
! CACCCTGACACATTTAAAAT+TGG + chr1.3:51266918-51266937 None:intergenic 35.0%
! GGTTGAAAGCTAGACTTTTT+AGG - chr1.3:51267930-51267949 MS.gene036183:intron 35.0%
! TGATGATGATGACTTATTGG+TGG + chr1.3:51268662-51268681 None:intergenic 35.0%
! TGCAGTCTCTAAGAAAATGA+TGG - chr1.3:51267006-51267025 MS.gene036183:intron 35.0%
! TGTTTCTTCTGAGAAAGAAG+TGG + chr1.3:51265255-51265274 None:intergenic 35.0%
! TTCTGAGAAAGAAGTGGAAT+TGG + chr1.3:51265249-51265268 None:intergenic 35.0%
! TTTTGAACAATCGGTCACAT+TGG - chr1.3:51267735-51267754 MS.gene036183:intron 35.0%
!! TGTGGTGGAGAGTATTATTA+AGG + chr1.3:51268418-51268437 None:intergenic 35.0%
!! TTACAGTGGATTGGATTACA+TGG - chr1.3:51267230-51267249 MS.gene036183:intron 35.0%
!! TTTGTTGTTGATTTGGGAAG+AGG + chr1.3:51268331-51268350 None:intergenic 35.0%
!!! AAGCAGGTTTTGGTTTTCTT+GGG - chr1.3:51268942-51268961 MS.gene036183:CDS 35.0%
!!! AGCATCATCATGTTTTGATG+AGG + chr1.3:51268905-51268924 None:intergenic 35.0%
!!! TCATCATGTTTTGATGAGGT+TGG + chr1.3:51268901-51268920 None:intergenic 35.0%
AAAGCTATCACTTCAGCATC+AGG + chr1.3:51265700-51265719 None:intergenic 40.0%
AAGAAAAAAAGAAGCCTCCC+TGG - chr1.3:51265344-51265363 MS.gene036183:CDS 40.0%
AAGGTAAGGGAAATCATGCA+TGG + chr1.3:51267528-51267547 None:intergenic 40.0%
AGGAAGAGAGATTGGACTAA+TGG + chr1.3:51268311-51268330 None:intergenic 40.0%
AGGACAGCTTCATAACTCAT+AGG - chr1.3:51268207-51268226 MS.gene036183:CDS 40.0%
AGGCTGTTGTGAGGAATTTA+TGG + chr1.3:51265315-51265334 None:intergenic 40.0%
AGGTAAGGGAAATCATGCAT+GGG + chr1.3:51267527-51267546 None:intergenic 40.0%
ATTAGTTACCTGGGTTACCA+GGG + chr1.3:51265364-51265383 None:intergenic 40.0%
ATTGTGTGAAAACTGCAGGA+AGG - chr1.3:51268187-51268206 MS.gene036183:CDS 40.0%
GAAGCAAAGGAACAACAAAG+AGG - chr1.3:51265837-51265856 MS.gene036183:CDS 40.0%
GATATGCTAACATTCACAGG+GGG - chr1.3:51268857-51268876 MS.gene036183:CDS 40.0%
GGAAATCATGCATGGGATAA+AGG + chr1.3:51267520-51267539 None:intergenic 40.0%
GGAAGAGAGATTGGACTAAT+GGG + chr1.3:51268310-51268329 None:intergenic 40.0%
GGACAGCTTCATAACTCATA+GGG - chr1.3:51268208-51268227 MS.gene036183:CDS 40.0%
GGATATGCTAACATTCACAG+GGG - chr1.3:51268856-51268875 MS.gene036183:CDS 40.0%
GGGTTATGATGAACACATGA+AGG + chr1.3:51265895-51265914 None:intergenic 40.0%
GGGTTTGTGTGATGAAGAAA+TGG + chr1.3:51268497-51268516 None:intergenic 40.0%
GTGTGATGAAGAAATGGTAG+AGG + chr1.3:51268491-51268510 None:intergenic 40.0%
GTGTTCATCATAACCCTTCA+AGG - chr1.3:51265899-51265918 MS.gene036183:CDS 40.0%
TACCATGGAAGTTGAAGCAA+AGG - chr1.3:51265824-51265843 MS.gene036183:CDS 40.0%
TATTAGTTACCTGGGTTACC+AGG + chr1.3:51265365-51265384 None:intergenic 40.0%
TGATGAAGAAATGGTAGAGG+AGG + chr1.3:51268488-51268507 None:intergenic 40.0%
TGGAATTGGACATTAGTGCA+GGG + chr1.3:51265235-51265254 None:intergenic 40.0%
TTAAATTGTGGTCGCAGTTG+CGG - chr1.3:51265416-51265435 MS.gene036183:CDS 40.0%
TTAACTGCCGCACATTCATT+TGG + chr1.3:51266712-51266731 None:intergenic 40.0%
TTCCTTTGCTTCAACTTCCA+TGG + chr1.3:51265829-51265848 None:intergenic 40.0%
TTTGCTTCAACTTCCATGGT+AGG + chr1.3:51265825-51265844 None:intergenic 40.0%
! ACACGGATTAACGTGTCAAT+GGG + chr1.3:51267481-51267500 None:intergenic 40.0%
! CTAGGGATGAACGAGTTTTA+AGG + chr1.3:51267865-51267884 None:intergenic 40.0%
! GATGATGACTTATTGGTGGT+TGG + chr1.3:51268658-51268677 None:intergenic 40.0%
! GATTAACGTGTCAATGGGTT+TGG + chr1.3:51267476-51267495 None:intergenic 40.0%
! TACACGGATTAACGTGTCAA+TGG + chr1.3:51267482-51267501 None:intergenic 40.0%
! TCAATGGGTTTGGACCAATT+GGG + chr1.3:51267466-51267485 None:intergenic 40.0%
! TCCCTTACCTTTTTGCCAAT+GGG - chr1.3:51267537-51267556 MS.gene036183:intron 40.0%
! TTCCCTTACCTTTTTGCCAA+TGG - chr1.3:51267536-51267555 MS.gene036183:intron 40.0%
!! AAAGCTCACTCTAAAACCTG+TGG - chr1.3:51266030-51266049 MS.gene036183:intron 40.0%
!! ATGATGATGGTGGAAGTCTT+GGG + chr1.3:51267306-51267325 None:intergenic 40.0%
!! CTAGTAGAAGCACCCTAAAA+AGG + chr1.3:51267895-51267914 None:intergenic 40.0%
!! GACTAATGGGTTTGTGTTTG+TGG + chr1.3:51268297-51268316 None:intergenic 40.0%
!! GAGAGGTTGGTGTGAAAATT+TGG + chr1.3:51268458-51268477 None:intergenic 40.0%
!! TAATGGGTTTGTGTTTGTGG+TGG + chr1.3:51268294-51268313 None:intergenic 40.0%
!! TATGATGATGGTGGAAGTCT+TGG + chr1.3:51267307-51267326 None:intergenic 40.0%
!!! AGGGAGGCTTCTTTTTTTCT+TGG + chr1.3:51265345-51265364 None:intergenic 40.0%
!!! ATTGTGGTACCCTTTTTTCC+AGG - chr1.3:51266073-51266092 MS.gene036183:intron 40.0%
!!! CAAGCAGGTTTTGGTTTTCT+TGG - chr1.3:51268941-51268960 MS.gene036183:CDS 40.0%
!!! TGATGTGGCTTTGTTGGTTT+TGG + chr1.3:51268358-51268377 None:intergenic 40.0%
!!! TGTTTTGATGAGGTTGGTGT+TGG + chr1.3:51268895-51268914 None:intergenic 40.0%
AACAACTGTTCCTGAGTCGT+GGG - chr1.3:51268967-51268986 MS.gene036183:CDS 45.0%
AACCTACAGCTACATAGGAG+AGG - chr1.3:51265793-51265812 MS.gene036183:CDS 45.0%
AAGTCACAGTCACAACAAGC+AGG - chr1.3:51268926-51268945 MS.gene036183:CDS 45.0%
AATGTGCCCCATTGGCAAAA+AGG + chr1.3:51267547-51267566 None:intergenic 45.0%
ATGCATGGGATAAAGGGAGA+GGG + chr1.3:51267513-51267532 None:intergenic 45.0%
ATTCAGGCTTGATGTTGTGG+TGG + chr1.3:51268433-51268452 None:intergenic 45.0%
CAAACCTCTGAGCTCAACAT+TGG - chr1.3:51268680-51268699 MS.gene036183:intron 45.0%
CCCCATTGGCAAAAAGGTAA+GGG + chr1.3:51267541-51267560 None:intergenic 45.0%
GAGATTCAGGCTTGATGTTG+TGG + chr1.3:51268436-51268455 None:intergenic 45.0%
GTGGAATTGGACATTAGTGC+AGG + chr1.3:51265236-51265255 None:intergenic 45.0%
GTGTGTGAGATCTGCAACAA+GGG - chr1.3:51265754-51265773 MS.gene036183:CDS 45.0%
TCTTGTAGAATGTGCCCCAT+TGG + chr1.3:51267555-51267574 None:intergenic 45.0%
TGATGAACACATGAAGGCTC+AGG + chr1.3:51265889-51265908 None:intergenic 45.0%
TGGTGAGTCCTTGGATGTAA+AGG - chr1.3:51268835-51268854 MS.gene036183:intron 45.0%
TGTGTGTGAGATCTGCAACA+AGG - chr1.3:51265753-51265772 MS.gene036183:CDS 45.0%
TTGGGAAGAGGAAGAGAGAT+TGG + chr1.3:51268319-51268338 None:intergenic 45.0%
! CAGTCACAACAAGCAGGTTT+TGG - chr1.3:51268932-51268951 MS.gene036183:CDS 45.0%
! CCCTTACCTTTTTGCCAATG+GGG - chr1.3:51267538-51267557 MS.gene036183:intron 45.0%
! GTCAATGGGTTTGGACCAAT+TGG + chr1.3:51267467-51267486 None:intergenic 45.0%
! GTTTGTGTTTGTGGTGGTGA+TGG + chr1.3:51268288-51268307 None:intergenic 45.0%
!! GACTTTCTTGGCCTTACCAA+CGG - chr1.3:51268800-51268819 MS.gene036183:intron 45.0%
!! TTGTGGTGGTGATGGCTAAT+TGG + chr1.3:51268280-51268299 None:intergenic 45.0%
!! TTTGATGAGGTTGGTGTTGG+TGG + chr1.3:51268892-51268911 None:intergenic 45.0%
ACAACTGTTCCTGAGTCGTG+GGG - chr1.3:51268968-51268987 MS.gene036183:CDS 50.0%
ACCAACAAAGCCACATCACC+TGG - chr1.3:51268360-51268379 MS.gene036183:CDS 50.0%
AGATCTCCAAGAGCCCTTGA+AGG + chr1.3:51265916-51265935 None:intergenic 50.0%
AGGGCTCTTGGAGATCTTAC+AGG - chr1.3:51265919-51265938 MS.gene036183:CDS 50.0%
AGGTTGCTAGGGTTAGGGTT+TGG + chr1.3:51268398-51268417 None:intergenic 50.0%
CAACAACTGTTCCTGAGTCG+TGG - chr1.3:51268966-51268985 MS.gene036183:CDS 50.0%
CATAACCCTTCAAGGGCTCT+TGG - chr1.3:51265907-51265926 MS.gene036183:CDS 50.0%
CATGCATGGGATAAAGGGAG+AGG + chr1.3:51267514-51267533 None:intergenic 50.0%
CCAACAAAGCCACATCACCT+GGG - chr1.3:51268361-51268380 MS.gene036183:CDS 50.0%
CTCCAAAAAGCAGCAACCGT+CGG - chr1.3:51268611-51268630 MS.gene036183:intron 50.0%
GAGCTCAACATTGGCCAGTT+TGG - chr1.3:51268689-51268708 MS.gene036183:intron 50.0%
GATCTCCAAGAGCCCTTGAA+GGG + chr1.3:51265915-51265934 None:intergenic 50.0%
GCCCCATTGGCAAAAAGGTA+AGG + chr1.3:51267542-51267561 None:intergenic 50.0%
GCTGAGTCACTGATCCAAAC+TGG + chr1.3:51268706-51268725 None:intergenic 50.0%
GGAGAGGACATAACCTACCA+TGG - chr1.3:51265809-51265828 MS.gene036183:CDS 50.0%
GGAGAGGGGACTAATGTACA+CGG + chr1.3:51267498-51267517 None:intergenic 50.0%
GTCCTCTCCTATGTAGCTGT+AGG + chr1.3:51265798-51265817 None:intergenic 50.0%
TGCATGGGATAAAGGGAGAG+GGG + chr1.3:51267512-51267531 None:intergenic 50.0%
! AAGGTTGTTGTGTGCTGACG+TGG + chr1.3:51268547-51268566 None:intergenic 50.0%
! AGGAAATGGTGGTGAGTCCT+TGG - chr1.3:51268826-51268845 MS.gene036183:intron 50.0%
! CTAGGGTTAGGGTTTGGTTG+AGG + chr1.3:51268392-51268411 None:intergenic 50.0%
! GGTTAGGGTTTGGTTGAGGT+GGG + chr1.3:51268388-51268407 None:intergenic 50.0%
! TGTTGTGTGCTGACGTGGAA+GGG + chr1.3:51268542-51268561 None:intergenic 50.0%
! TTGTTGTGTGCTGACGTGGA+AGG + chr1.3:51268543-51268562 None:intergenic 50.0%
!! TTTCTTGGCCTTACCAACGG+CGG - chr1.3:51268803-51268822 MS.gene036183:intron 50.0%
!!! GGACTTTTGAGGCTGTTGTG+AGG + chr1.3:51265324-51265343 None:intergenic 50.0%
AACATGAGAGGCTGCCTCAC+CGG - chr1.3:51268752-51268771 MS.gene036183:intron 55.0%
AGAGCAGTTGCTGAGAGGTG+TGG + chr1.3:51268590-51268609 None:intergenic 55.0%
AGGAGGCTGAGAAGAGAGGT+TGG + chr1.3:51268471-51268490 None:intergenic 55.0%
AGTTACCTGGGTTACCAGGG+AGG + chr1.3:51265361-51265380 None:intergenic 55.0%
CAACTGTTCCTGAGTCGTGG+GGG - chr1.3:51268969-51268988 MS.gene036183:CDS 55.0%
CATTTCCTCCGCCGTTGGTA+AGG + chr1.3:51268814-51268833 None:intergenic 55.0%
CTCACCGGAAAGAACGACGA+CGG - chr1.3:51268767-51268786 MS.gene036183:intron 55.0%
CTGGCCAATGTTGAGCTCAG+AGG + chr1.3:51268687-51268706 None:intergenic 55.0%
CTTACCAACGGCGGAGGAAA+TGG - chr1.3:51268812-51268831 MS.gene036183:intron 55.0%
GAGACCGTCGTCGTTCTTTC+CGG + chr1.3:51268774-51268793 None:intergenic 55.0%
GGAGAAGAGCAGTTGCTGAG+AGG + chr1.3:51268595-51268614 None:intergenic 55.0%
GGTCTCACGAGGGACTTTCT+TGG - chr1.3:51268788-51268807 MS.gene036183:intron 55.0%
GTAGAGGAGGCTGAGAAGAG+AGG + chr1.3:51268475-51268494 None:intergenic 55.0%
TAACAGTTCCCCCACGACTC+AGG + chr1.3:51268980-51268999 None:intergenic 55.0%
! GACATGGCAGCACTGGAAGA+AGG + chr1.3:51268566-51268585 None:intergenic 55.0%
! GGGTTAGGGTTTGGTTGAGG+TGG + chr1.3:51268389-51268408 None:intergenic 55.0%
! TGCTGAGAGGTGTGGTGACA+TGG + chr1.3:51268582-51268601 None:intergenic 55.0%
!! CCCAGGTGATGTGGCTTTGT+TGG + chr1.3:51268364-51268383 None:intergenic 55.0%
!!! CACCGACGGTTGCTGCTTTT+TGG + chr1.3:51268616-51268635 None:intergenic 55.0%
ACCAACGGCGGAGGAAATGG+TGG - chr1.3:51268815-51268834 MS.gene036183:intron 60.0%
ACCACCATTTCCTCCGCCGT+TGG + chr1.3:51268819-51268838 None:intergenic 60.0%
AGAACGACGACGGTCTCACG+AGG - chr1.3:51268777-51268796 MS.gene036183:intron 60.0%
AGAAGCCTCCCTGGTAACCC+AGG - chr1.3:51265353-51265372 MS.gene036183:CDS 60.0%
CGTCGTCGTTCTTTCCGGTG+AGG + chr1.3:51268769-51268788 None:intergenic 60.0%
GAACGACGACGGTCTCACGA+GGG - chr1.3:51268778-51268797 MS.gene036183:intron 60.0%
GTGTGGTGACATGGCAGCAC+TGG + chr1.3:51268573-51268592 None:intergenic 60.0%
GTTTGGTTGAGGTGGGTCCC+AGG + chr1.3:51268381-51268400 None:intergenic 60.0%
! TGGTGGTTGGCTGCCTGTGA+TGG + chr1.3:51268645-51268664 None:intergenic 60.0%
! TGGTTGGCTGCCTGTGATGG+CGG + chr1.3:51268642-51268661 None:intergenic 60.0%
GAGGTGGGTCCCAGGTGATG+TGG + chr1.3:51268373-51268392 None:intergenic 65.0%
!! CTTGGCCTTACCAACGGCGG+AGG - chr1.3:51268806-51268825 MS.gene036183:intron 65.0%
!! TTGGCTGCCTGTGATGGCGG+CGG + chr1.3:51268639-51268658 None:intergenic 65.0%
!! TGTGATGGCGGCGGCACCGA+CGG + chr1.3:51268630-51268649 None:intergenic 70.0%
!! GTCGGTGCCGCCGCCATCAC+AGG - chr1.3:51268629-51268648 MS.gene036183:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 51265227 51269000 51265227 ID=MS.gene036183
chr1.3 mRNA 51265227 51269000 51265227 ID=MS.gene036183.t1;Parent=MS.gene036183
chr1.3 exon 51268853 51269000 51268853 ID=MS.gene036183.t1.exon1;Parent=MS.gene036183.t1
chr1.3 CDS 51268853 51269000 51268853 ID=cds.MS.gene036183.t1;Parent=MS.gene036183.t1
chr1.3 exon 51268133 51268532 51268133 ID=MS.gene036183.t1.exon2;Parent=MS.gene036183.t1
chr1.3 CDS 51268133 51268532 51268133 ID=cds.MS.gene036183.t1;Parent=MS.gene036183.t1
chr1.3 exon 51265227 51266022 51265227 ID=MS.gene036183.t1.exon3;Parent=MS.gene036183.t1
chr1.3 CDS 51265227 51266022 51265227 ID=cds.MS.gene036183.t1;Parent=MS.gene036183.t1
Gene Sequence

>MS.gene036183

ATGTTCCCTGCACTAATGTCCAATTCCACTTCTTTCTCAGAAGAAACAAGTGTCTCTTCTACTAGATTAAACCACTTAGTTTCAACCATAAATTCCTCACAACAGCCTCAAAAGTCCAAGAAAAAAAGAAGCCTCCCTGGTAACCCAGGTAACTAATAATTAGTTAAATAGATTTATATTTATAACATGTTAAATTGTGGTCGCAGTTGCGGTTACGCTTACATCTTGTTGCAGAGACCTCAAAATCCTTTATATTATGGCCGCAACTAATTACAGTTGCAGACCGCAATTTAAAATCACATGTAACAACATATATTAGTATAATATTAATAGTATATAGTATATAGTTTTTTTTTTTTTTGAAGAAATCAAAATTAGTATATAGTATATAGTATATACACCTTAGTTCAATTGTTTAGTATATGATTGACATGTTAATTAATTTTGTAATTGATTCTCTTAATTCAGATCCTGATGCTGAAGTGATAGCTTTATCACCAAAGACACTATTAGCAACAAATAGATTTGTGTGTGAGATCTGCAACAAGGGTTTTCAAAGAGATCAAAACCTACAGCTACATAGGAGAGGACATAACCTACCATGGAAGTTGAAGCAAAGGAACAACAAAGAGGTTATTAAAAAGAGAGCTTATGTTTGTCCTGAGCCTTCATGTGTTCATCATAACCCTTCAAGGGCTCTTGGAGATCTTACAGGAATTAAGAAACATTATAGTAGAAAACATGGTGAGAAAAAATGGAAATGTGATAAGTGCTCAAAGATCTATGCTGTTCATTCTGATTGGAAAGCTCACTCTAAAACCTGTGGTACTAGAGAATATAAATGTGATTGTGGTACCCTTTTTTCCAGGTATAGTACTATTACTGCTCATAGATATAAATTTCAAGTACACACATAATATTTTCATGTTAATTTCATATATCCATGTTTTATTAAATTAATCCATTTTTTTCTTATGTTTCTATTTTAGATCAATAATAATGTTATAAGTGCAAATCATAATTTTAAATTGCGGTCTGCAGCTACAATTCAGCCGCAATATAAATGTTTTAAAGATTTGTGTAACGGTTTGCAATTCCGATTGCATTTGCCTTATTGTTTATTGTGCTGCAATATCAAAGTTTGCAACACAACAACAACTAGGACCGCAATCGTAACCTAAAACTATCCTACGGTGTATTTACCATAATTTGGTAGAGATTAAATAAATTACTTTTCGTATCAACAAGATTTTAAATTTAGTTTCTTAAACAATGTCTTTAGAACAGTTGTTAGCATGCCTGTTTTCATAATTATTCTTTTTATTAGTATCTTCTAATTACATAAGAATGTATGCTAGATTTTTACCCTTGAAATTGTTTCATGAAAGGTTGCATGAAATTGTGGATACAGCTAATAAATAAGTGTCCAATTGCTAAAGAGACTAGAATTAACTTTAGCTGTTTTCTGAATCCTAAAAAAGGCCAAATGAATGTGCGGCAGTTAACAACAAAAGAAAACACAATCCACACACCTTTTGTTTTTATCTACTACTGTATTATCTGTGACTCAATAGCAATTTTGTTTGTTTTTTTTTAACATCATGATACATGCACATGCATGTCAGCATGAACAGCATGATGTATACTATTTTTACAACATTATGTGTAAAAAAATAAAATAAAAATTTCCAATTTTAAATGTGTCAGGGTGCTCAATTGTTTTCTAGACTTGATTGTACTCTCTCTACACTATACACTCTTATGTTGATATGGAGTGGGTGCAGTCTCTAAGAAAATGATGGACATCTATTTCTGTCTACTGAAAAAGTAAAAAGAATATAATCAATATAGTTAGAAAATTTGTGATGATTTCTTACTTTTTTCTCAATTTCATTTTTATTGAAAACTCCATAGTATTTTTCTCTGAACTTTTTTCATCATTGTGAAATCTGATAAATCTGCAACAAATCTGATATGCTAAGTTGCTTTCTTCTATAACTTCATTACAGTGGATTGGATTACATGGATTCATTGATCTCAATTGCTTATCTTTGTGTCGTGCATGAGTTCTAGTTTCCCAAGACTTCCACCATCATCATAATTATAAGACTATAGTACCAATAATCCTTCAACATAATATTATATAATTTTAATTGTTTGCATGCATAAAGCAAAAGGCTATCCACATCAATTGCATCATGCATATGATCATTTGACCCTGTAACATAATTTATGTCCCAATTGGTCCAAACCCATTGACACGTTAATCCGTGTACATTAGTCCCCTCTCCCTTTATCCCATGCATGATTTCCCTTACCTTTTTGCCAATGGGGCACATTCTACAAGAACTTCACAAGTCTTCTTTGGTTATGTACATATGCATGCATGATTCATTTCCCTTCTCAAAATCAAATTCATTGACTCATTTTCTCTCAAAAAAAGTTACAAAAAAATATATAAAATTTACCATGTTAAAAATTCATAAATGAATTGGGTGTATTGCTGTATTTTGAACAATCGGTCACATTGGACTCATTTTCGTATGCAAGTTATAATACAGACGTTCGATTAAGATTAGATGACTCAAATTATGATTGGATAAATGCAGGATAATTTCAATTTAGGGAATCATATCCTTAAAACTCGTTCATCCCTAGTAATAAACCTTTTTAGGGTGCTTCTACTAGTACATTTTAGAGAAGGGTTGAAAGCTAGACTTTTTAGGTTAATTTGGTTTAGAGGTTAATTCAAATTTTTATTACTATTTAACAAATAACATCCCCTCAATAAAAACACAAGTGACATGTTGGTTCATGAATTTCACCATTGAATCAAGACCATATTAGAGGCTCTTTTTTATAACTAAATAAATAACACCATGGTTATAAGTATGATGCAAGAAAATATATAGTATTTTCTTATACTCTTTTGTGAATTAATACAAAATTTCTTTTGTTTTATTGTGTGAAAACTGCAGGAAGGACAGCTTCATAACTCATAGGGCATTTTGTGATGCATTAGCTGAAGAAAGTGCAAGAATGTCTGCAAACCAATTAGCCATCACCACCACAAACACAAACCCATTAGTCCAATCTCTCTTCCTCTTCCCAAATCAACAACAAAGTTTCCAAAACCAACAAAGCCACATCACCTGGGACCCACCTCAACCAAACCCTAACCCTAGCAACCTTAATAATACTCTCCACCACAACATCAAGCCTGAATCTCCAAATTTTCACACCAACCTCTCTTCTCAGCCTCCTCTACCATTTCTTCATCACACAAACCCTAAGAGCATAATGACATCATCACCCTTCCACGTCAGCACACAACAACCTTCTTCCAGTGCTGCCATGTCACCACACCTCTCAGCAACTGCTCTTCTCCAAAAAGCAGCAACCGTCGGTGCCGCCGCCATCACAGGCAGCCAACCACCAATAAGTCATCATCATCAAACCTCTGAGCTCAACATTGGCCAGTTTGGATCAGTGACTCAGCTCAACTCCGTTGATCACTACATTAACAACATGAGAGGCTGCCTCACCGGAAAGAACGACGACGGTCTCACGAGGGACTTTCTTGGCCTTACCAACGGCGGAGGAAATGGTGGTGAGTCCTTGGATGTAAAGGATATGCTAACATTCACAGGGGGTGTAGAATACCACCAACACCAACCTCATCAAAACATGATGATGCTCAAGTCACAGTCACAACAAGCAGGTTTTGGTTTTCTTGGGACAACAACTGTTCCTGAGTCGTGGGGGAACTGTTAG
Protein sequence

>MS.gene036183.t1

MFPALMSNSTSFSEETSVSSTRLNHLVSTINSSQQPQKSKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVIKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKIYAVHSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARMSANQLAITTTNTNPLVQSLFLFPNQQQSFQNQQSHITWDPPQPNPNPSNLNNTLHHNIKPESPNFHTNLSSQPPLPFLHHTNPKSIMTSSPFHVSTQQPSSSAAMSPHLSATALLQKAATVGAAAITGSQPPISHHHQTSELNIGQFGSVTQLNSVDHYINNMRGCLTGKNDDGLTRDFLGLTNGGGNGGESLDVKDMLTFTGGVEYHQHQPHQNMMMLKSQSQQAGFGFLGTTTVPESWGNC