Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036253.t1 | XP_003590706.2 | 99.4 | 176 | 1 | 0 | 1 | 176 | 1 | 176 | 2.90E-92 | 347.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036253.t1 | Q8VYK4 | 66.9 | 169 | 50 | 4 | 2 | 170 | 6 | 168 | 7.8e-54 | 211.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036253.t1 | B7FGV1 | 99.4 | 176 | 1 | 0 | 1 | 176 | 1 | 176 | 2.1e-92 | 347.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene036253.t1 | TF | NF-YB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036253.t1 | MTR_1g072790 | 99.432 | 176 | 1 | 0 | 1 | 176 | 1 | 176 | 4.23e-132 | 367 |
| MS.gene036253.t1 | MTR_7g100650 | 70.588 | 170 | 36 | 6 | 11 | 176 | 12 | 171 | 5.10e-77 | 227 |
| MS.gene036253.t1 | MTR_7g061270 | 73.718 | 156 | 30 | 4 | 11 | 162 | 12 | 160 | 1.44e-76 | 226 |
| MS.gene036253.t1 | MTR_5g095740 | 60.759 | 158 | 50 | 2 | 1 | 152 | 1 | 152 | 2.56e-62 | 191 |
| MS.gene036253.t1 | MTR_3g058980 | 67.883 | 137 | 39 | 2 | 1 | 134 | 1 | 135 | 3.66e-61 | 188 |
| MS.gene036253.t1 | MTR_2g026710 | 65.693 | 137 | 35 | 2 | 9 | 145 | 3 | 127 | 1.93e-60 | 185 |
| MS.gene036253.t1 | MTR_8g091720 | 74.757 | 103 | 26 | 0 | 24 | 126 | 23 | 125 | 4.27e-55 | 173 |
| MS.gene036253.t1 | MTR_4g133938 | 70.690 | 116 | 31 | 2 | 22 | 135 | 10 | 124 | 5.79e-54 | 168 |
| MS.gene036253.t1 | MTR_8g093920 | 72.632 | 95 | 26 | 0 | 28 | 122 | 39 | 133 | 6.80e-52 | 165 |
| MS.gene036253.t1 | MTR_0392s0020 | 68.571 | 105 | 29 | 1 | 22 | 122 | 7 | 111 | 4.44e-50 | 158 |
| MS.gene036253.t1 | MTR_4g119500 | 66.019 | 103 | 35 | 0 | 28 | 130 | 21 | 123 | 1.50e-49 | 156 |
| MS.gene036253.t1 | MTR_1g088860 | 69.474 | 95 | 29 | 0 | 28 | 122 | 35 | 129 | 4.30e-48 | 155 |
| MS.gene036253.t1 | MTR_4g133952 | 63.063 | 111 | 37 | 1 | 16 | 122 | 41 | 151 | 5.04e-48 | 156 |
| MS.gene036253.t1 | MTR_1g039040 | 59.223 | 103 | 42 | 0 | 28 | 130 | 5 | 107 | 6.65e-44 | 144 |
| MS.gene036253.t1 | MTR_1g083070 | 58.696 | 92 | 38 | 0 | 29 | 120 | 4 | 95 | 1.70e-37 | 125 |
| MS.gene036253.t1 | MTR_1g029070 | 48.485 | 99 | 51 | 0 | 27 | 125 | 50 | 148 | 1.27e-29 | 107 |
| MS.gene036253.t1 | MTR_5g095900 | 44.792 | 96 | 53 | 0 | 22 | 117 | 9 | 104 | 1.54e-22 | 89.4 |
| MS.gene036253.t1 | MTR_2g056000 | 33.858 | 127 | 81 | 2 | 8 | 134 | 21 | 144 | 2.10e-19 | 81.3 |
| MS.gene036253.t1 | MTR_1g028480 | 59.649 | 57 | 23 | 0 | 64 | 120 | 24 | 80 | 3.34e-19 | 78.6 |
| MS.gene036253.t1 | MTR_1g029100 | 40.789 | 76 | 45 | 0 | 34 | 109 | 7 | 82 | 7.04e-19 | 77.4 |
| MS.gene036253.t1 | MTR_4g112380 | 41.176 | 85 | 48 | 1 | 30 | 114 | 12 | 94 | 2.53e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036253.t1 | AT2G37060 | 66.864 | 169 | 50 | 4 | 2 | 170 | 6 | 168 | 7.73e-76 | 224 |
| MS.gene036253.t1 | AT2G37060 | 66.864 | 169 | 50 | 4 | 2 | 170 | 6 | 168 | 7.73e-76 | 224 |
| MS.gene036253.t1 | AT2G37060 | 66.864 | 169 | 50 | 4 | 2 | 170 | 6 | 168 | 7.73e-76 | 224 |
| MS.gene036253.t1 | AT3G53340 | 68.125 | 160 | 40 | 4 | 17 | 170 | 19 | 173 | 1.36e-69 | 209 |
| MS.gene036253.t1 | AT3G53340 | 68.125 | 160 | 40 | 4 | 17 | 170 | 19 | 173 | 1.36e-69 | 209 |
| MS.gene036253.t1 | AT2G38880 | 71.918 | 146 | 30 | 3 | 1 | 145 | 1 | 136 | 2.38e-69 | 207 |
| MS.gene036253.t1 | AT2G38880 | 71.918 | 146 | 30 | 3 | 1 | 145 | 1 | 136 | 3.13e-69 | 207 |
| MS.gene036253.t1 | AT2G38880 | 71.918 | 146 | 30 | 3 | 1 | 145 | 1 | 136 | 3.13e-69 | 207 |
| MS.gene036253.t1 | AT2G38880 | 71.918 | 146 | 30 | 3 | 1 | 145 | 1 | 136 | 3.13e-69 | 207 |
| MS.gene036253.t1 | AT2G38880 | 70.548 | 146 | 30 | 4 | 1 | 145 | 1 | 134 | 9.37e-66 | 198 |
| MS.gene036253.t1 | AT2G38880 | 62.130 | 169 | 30 | 4 | 1 | 145 | 1 | 159 | 1.91e-63 | 193 |
| MS.gene036253.t1 | AT2G38880 | 62.130 | 169 | 30 | 4 | 1 | 145 | 1 | 159 | 1.91e-63 | 193 |
| MS.gene036253.t1 | AT4G14540 | 71.311 | 122 | 27 | 2 | 1 | 122 | 1 | 114 | 1.58e-60 | 185 |
| MS.gene036253.t1 | AT2G38880 | 75.000 | 120 | 20 | 2 | 1 | 119 | 1 | 111 | 1.78e-60 | 183 |
| MS.gene036253.t1 | AT3G53340 | 83.654 | 104 | 15 | 1 | 17 | 120 | 19 | 120 | 6.44e-60 | 183 |
| MS.gene036253.t1 | AT3G53340 | 83.654 | 104 | 15 | 1 | 17 | 120 | 19 | 120 | 6.44e-60 | 183 |
| MS.gene036253.t1 | AT5G47640 | 80.952 | 105 | 20 | 0 | 28 | 132 | 26 | 130 | 7.07e-60 | 185 |
| MS.gene036253.t1 | AT3G53340 | 83.495 | 103 | 15 | 1 | 17 | 119 | 19 | 119 | 9.32e-60 | 182 |
| MS.gene036253.t1 | AT2G38880 | 75.630 | 119 | 21 | 2 | 1 | 119 | 1 | 111 | 1.37e-59 | 182 |
| MS.gene036253.t1 | AT2G38880 | 75.630 | 119 | 21 | 2 | 1 | 119 | 1 | 111 | 1.37e-59 | 182 |
| MS.gene036253.t1 | AT2G38880 | 75.630 | 119 | 21 | 2 | 1 | 119 | 1 | 111 | 1.37e-59 | 182 |
| MS.gene036253.t1 | AT2G13570 | 62.791 | 129 | 39 | 2 | 9 | 128 | 7 | 135 | 1.63e-53 | 169 |
| MS.gene036253.t1 | AT5G47670 | 49.686 | 159 | 65 | 4 | 14 | 166 | 19 | 168 | 1.73e-47 | 154 |
| MS.gene036253.t1 | AT2G47810 | 67.677 | 99 | 32 | 0 | 24 | 122 | 46 | 144 | 2.62e-47 | 152 |
| MS.gene036253.t1 | AT5G47670 | 61.818 | 110 | 37 | 1 | 28 | 132 | 57 | 166 | 3.86e-47 | 154 |
| MS.gene036253.t1 | AT5G47670 | 61.818 | 110 | 37 | 1 | 28 | 132 | 57 | 166 | 3.86e-47 | 154 |
| MS.gene036253.t1 | AT1G21970 | 54.310 | 116 | 52 | 1 | 26 | 141 | 56 | 170 | 1.20e-44 | 147 |
| MS.gene036253.t1 | AT1G09030 | 52.830 | 106 | 50 | 0 | 29 | 134 | 3 | 108 | 1.67e-39 | 131 |
| MS.gene036253.t1 | AT5G08190 | 36.538 | 104 | 66 | 0 | 29 | 132 | 11 | 114 | 2.44e-19 | 80.5 |
| MS.gene036253.t1 | AT5G08190 | 37.963 | 108 | 60 | 3 | 29 | 132 | 11 | 115 | 5.79e-19 | 79.7 |
| MS.gene036253.t1 | AT5G23090 | 34.615 | 104 | 68 | 0 | 30 | 133 | 12 | 115 | 2.19e-18 | 77.8 |
| MS.gene036253.t1 | AT5G23090 | 37.383 | 107 | 62 | 2 | 30 | 133 | 12 | 116 | 4.87e-18 | 77.0 |
| MS.gene036253.t1 | AT5G23090 | 37.383 | 107 | 62 | 2 | 30 | 133 | 12 | 116 | 4.87e-18 | 77.0 |
| MS.gene036253.t1 | AT5G23090 | 37.383 | 107 | 62 | 2 | 30 | 133 | 12 | 116 | 4.87e-18 | 77.0 |
| MS.gene036253.t1 | AT5G23090 | 35.955 | 89 | 56 | 1 | 46 | 133 | 15 | 103 | 1.72e-13 | 64.7 |
Find 34 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTCTTTCTCTTCTCTTTC+TGG | 0.035702 | 1.3:+52428358 | None:intergenic |
| GAGAAGAGAAAGACCATTAA+TGG | 0.272230 | 1.3:-52428351 | MS.gene036253:CDS |
| TAACAAATCATCTCCATTAA+TGG | 0.277036 | 1.3:+52428338 | None:intergenic |
| CATATTGCAGTTTGTTCATC+AGG | 0.293386 | 1.3:-52427827 | MS.gene036253:intron |
| TTATGGGCTATGGCTACTTT+AGG | 0.294228 | 1.3:-52428318 | MS.gene036253:CDS |
| TAATGGAGATGATTTGTTAT+GGG | 0.363879 | 1.3:-52428334 | MS.gene036253:CDS |
| TTAATGGAGATGATTTGTTA+TGG | 0.386568 | 1.3:-52428335 | MS.gene036253:CDS |
| TCTCGTGGCTTTCTTCGCAT+TGG | 0.434390 | 1.3:+52429015 | None:intergenic |
| GACCTGGAGGACCGCCAACT+TGG | 0.437143 | 1.3:+52427971 | None:intergenic |
| GCAGGTGCATCCACAACATC+TGG | 0.444089 | 1.3:-52425739 | MS.gene036253:intron |
| CTTGCTAGGTACACCTTAAG+TGG | 0.449127 | 1.3:+52428276 | None:intergenic |
| GACCAAGTTGGCGGTCCTCC+AGG | 0.458458 | 1.3:-52427973 | MS.gene036253:CDS |
| ATTCTGCTAATGTTAGCTAT+AGG | 0.459912 | 1.3:+52428930 | None:intergenic |
| TGGCTTTCTTCGCATTGGTT+CGG | 0.462126 | 1.3:+52429020 | None:intergenic |
| AGACTATATAGAACCACTTA+AGG | 0.485870 | 1.3:-52428289 | MS.gene036253:CDS |
| TTTGAGCTATATTGATTCCC+AGG | 0.487521 | 1.3:-52427800 | MS.gene036253:intron |
| AGATGATTTGTTATGGGCTA+TGG | 0.505790 | 1.3:-52428328 | MS.gene036253:CDS |
| TCCTCCAGGTCAAAATGCTC+AGG | 0.507423 | 1.3:-52427959 | MS.gene036253:intron |
| GTTAGAAACAGTGATGGATC+TGG | 0.524015 | 1.3:-52428003 | MS.gene036253:CDS |
| TTGGTTCGGTGCATCTGCCA+TGG | 0.526473 | 1.3:+52429034 | None:intergenic |
| TTACCTCTCTGAACCTTGCT+AGG | 0.526654 | 1.3:+52428262 | None:intergenic |
| TTCTGATAGGGTGATAGTAA+AGG | 0.555051 | 1.3:-52428030 | MS.gene036253:intron |
| CACTTAAGGTGTACCTAGCA+AGG | 0.580922 | 1.3:-52428275 | MS.gene036253:CDS |
| ATATTGCAGTTTGTTCATCA+GGG | 0.598604 | 1.3:-52427826 | MS.gene036253:intron |
| GGATCTGTTAGAAACAGTGA+TGG | 0.605861 | 1.3:-52428009 | MS.gene036253:CDS |
| TCTGTTCACCACCACTCTCG+TGG | 0.616032 | 1.3:+52429000 | None:intergenic |
| TGCGAAGAAAGCCACGAGAG+TGG | 0.627075 | 1.3:-52429011 | MS.gene036253:CDS |
| GGTAGACGAGACCAAGTTGG+CGG | 0.631551 | 1.3:-52427982 | MS.gene036253:CDS |
| TCTGGTAGACGAGACCAAGT+TGG | 0.636481 | 1.3:-52427985 | MS.gene036253:CDS |
| GAAGGCATAACCAGATGTTG+TGG | 0.663094 | 1.3:+52425729 | None:intergenic |
| GAAGAAAGCCACGAGAGTGG+TGG | 0.673522 | 1.3:-52429008 | MS.gene036253:CDS |
| GGTGGTGAACAGAGTCCACG+TGG | 0.738315 | 1.3:-52428990 | MS.gene036253:CDS |
| GAAGCAGAAGAAGAGCCACG+TGG | 0.770183 | 1.3:+52428975 | None:intergenic |
| GTACCTAGCAAGGTTCAGAG+AGG | 0.773002 | 1.3:-52428265 | MS.gene036253:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATAAATTTCAGTTAT+TGG | - | chr1.3:52426039-52426058 | MS.gene036253:intron | 15.0% |
| !!! | AATAAAAAATACTATGGTTT+TGG | + | chr1.3:52425950-52425969 | None:intergenic | 15.0% |
| !!! | ATATAATAAATTGTGGTTTT+TGG | - | chr1.3:52426211-52426230 | MS.gene036253:intron | 15.0% |
| !!! | TTTAATTTGTGTTTTTATTC+TGG | - | chr1.3:52426824-52426843 | MS.gene036253:intron | 15.0% |
| !! | AAAATAATACAATCAATCAG+AGG | + | chr1.3:52426637-52426656 | None:intergenic | 20.0% |
| !! | AAAGATCAAAGAGAAAAAAA+TGG | + | chr1.3:52428415-52428434 | None:intergenic | 20.0% |
| !! | AAATAATACAATCAATCAGA+GGG | + | chr1.3:52426636-52426655 | None:intergenic | 20.0% |
| !! | AGTTGAAAAATGCTTAAAAA+TGG | - | chr1.3:52425991-52426010 | MS.gene036253:intron | 20.0% |
| !! | ATGGGTAATATAATAAATTG+TGG | - | chr1.3:52426204-52426223 | MS.gene036253:intron | 20.0% |
| !! | TTGTCAATTTATATGATGTT+TGG | - | chr1.3:52426273-52426292 | MS.gene036253:intron | 20.0% |
| !!! | AATCAATAAAGTTCTGATAA+AGG | + | chr1.3:52427848-52427867 | None:intergenic | 20.0% |
| !!! | ATTTTGATATAGCAAACATT+GGG | + | chr1.3:52427529-52427548 | None:intergenic | 20.0% |
| ! | AAAAAAGCTTTACCTTCAAA+TGG | - | chr1.3:52425839-52425858 | MS.gene036253:intron | 25.0% |
| ! | AAAAAGCTTTACCTTCAAAT+GGG | - | chr1.3:52425840-52425859 | MS.gene036253:intron | 25.0% |
| ! | AAATTTCAGTTATTGGCATT+TGG | - | chr1.3:52426046-52426065 | MS.gene036253:intron | 25.0% |
| ! | AAGAATTAAGAGTAGTGATT+TGG | - | chr1.3:52428866-52428885 | MS.gene036253:CDS | 25.0% |
| ! | AAGAGCAATCACAATATATA+TGG | + | chr1.3:52427712-52427731 | None:intergenic | 25.0% |
| ! | AATAATACAATCAATCAGAG+GGG | + | chr1.3:52426635-52426654 | None:intergenic | 25.0% |
| ! | AATTTCAGTTATTGGCATTT+GGG | - | chr1.3:52426047-52426066 | MS.gene036253:intron | 25.0% |
| ! | ATATATATTGTGATTGCTCT+TGG | - | chr1.3:52427711-52427730 | MS.gene036253:intron | 25.0% |
| ! | ATATTACCCATCTAAAAAGA+GGG | + | chr1.3:52426195-52426214 | None:intergenic | 25.0% |
| ! | ATTGAATTTCAACATAGACA+AGG | + | chr1.3:52427623-52427642 | None:intergenic | 25.0% |
| ! | CAAACAAACAAAATTCAGTA+TGG | + | chr1.3:52428155-52428174 | None:intergenic | 25.0% |
| ! | CCATAAAGAACATTATCAAA+TGG | + | chr1.3:52426525-52426544 | None:intergenic | 25.0% |
| ! | TAACAAATCATCTCCATTAA+TGG | + | chr1.3:52426407-52426426 | None:intergenic | 25.0% |
| ! | TATATCAAAATCTGGTATTC+AGG | - | chr1.3:52427538-52427557 | MS.gene036253:intron | 25.0% |
| ! | TATATTACCCATCTAAAAAG+AGG | + | chr1.3:52426196-52426215 | None:intergenic | 25.0% |
| ! | TCAAACTGAATGTTAACATT+TGG | + | chr1.3:52427318-52427337 | None:intergenic | 25.0% |
| ! | TCTTCATAATAACTCAATCT+GGG | + | chr1.3:52427647-52427666 | None:intergenic | 25.0% |
| ! | TTGCTAATTTATATGATGCT+GGG | - | chr1.3:52426100-52426119 | MS.gene036253:intron | 25.0% |
| ! | TTTGCTAATTTATATGATGC+TGG | - | chr1.3:52426099-52426118 | MS.gene036253:intron | 25.0% |
| !! | TATTCATGATTTTGCATTGA+AGG | + | chr1.3:52429034-52429053 | None:intergenic | 25.0% |
| !! | TTTAGTTCCAGATTTCAATT+TGG | + | chr1.3:52427250-52427269 | None:intergenic | 25.0% |
| !! | TTTTATGCTCTCTTTTAGAT+AGG | - | chr1.3:52426017-52426036 | MS.gene036253:intron | 25.0% |
| !! | TTTTTACCCTCTTTTTAGAT+GGG | - | chr1.3:52426186-52426205 | MS.gene036253:intron | 25.0% |
| !!! | AAATACTATGGTTTTGGAAT+TGG | + | chr1.3:52425944-52425963 | None:intergenic | 25.0% |
| !!! | AATACTATGGTTTTGGAATT+GGG | + | chr1.3:52425943-52425962 | None:intergenic | 25.0% |
| !!! | ATGTTTGCTATATCAAAATC+TGG | - | chr1.3:52427530-52427549 | MS.gene036253:intron | 25.0% |
| !!! | ATGTTTGGTGAAAATCTTTT+AGG | - | chr1.3:52426288-52426307 | MS.gene036253:intron | 25.0% |
| !!! | CCATTTGATAATGTTCTTTA+TGG | - | chr1.3:52426522-52426541 | MS.gene036253:intron | 25.0% |
| !!! | GATTTTGATATAGCAAACAT+TGG | + | chr1.3:52427530-52427549 | None:intergenic | 25.0% |
| !!! | TAATGGAGATGATTTGTTAT+GGG | - | chr1.3:52426408-52426427 | MS.gene036253:intron | 25.0% |
| !!! | TGTTTGGTGAAAATCTTTTA+GGG | - | chr1.3:52426289-52426308 | MS.gene036253:intron | 25.0% |
| !!! | TTAATGGAGATGATTTGTTA+TGG | - | chr1.3:52426407-52426426 | MS.gene036253:intron | 25.0% |
| !!! | TTTTTGTTTGTTGTCTGAAT+TGG | - | chr1.3:52426320-52426339 | MS.gene036253:intron | 25.0% |
| !!! | TTTTTTACCCTCTTTTTAGA+TGG | - | chr1.3:52426185-52426204 | MS.gene036253:intron | 25.0% |
| AAAACAGAATGGATCAATAG+GGG | + | chr1.3:52427577-52427596 | None:intergenic | 30.0% | |
| AACAAGTTCATGCTCATTTA+TGG | - | chr1.3:52427017-52427036 | MS.gene036253:intron | 30.0% | |
| AGACTATATAGAACCACTTA+AGG | - | chr1.3:52426453-52426472 | MS.gene036253:intron | 30.0% | |
| AGCAATCACAATATATATGG+TGG | + | chr1.3:52427709-52427728 | None:intergenic | 30.0% | |
| ATCAAACAAAAGCTCAAATG+TGG | + | chr1.3:52428700-52428719 | None:intergenic | 30.0% | |
| ATTCGAAAGTTACAAACCAA+AGG | + | chr1.3:52428218-52428237 | None:intergenic | 30.0% | |
| ATTCTGCTAATGTTAGCTAT+AGG | + | chr1.3:52425815-52425834 | None:intergenic | 30.0% | |
| CAAAACAGAATGGATCAATA+GGG | + | chr1.3:52427578-52427597 | None:intergenic | 30.0% | |
| CAATACATGTTGCCAATTTA+AGG | - | chr1.3:52427095-52427114 | MS.gene036253:intron | 30.0% | |
| CAATCACAATATATATGGTG+GGG | + | chr1.3:52427707-52427726 | None:intergenic | 30.0% | |
| CAATCATCCAAATTGAAATC+TGG | - | chr1.3:52427240-52427259 | MS.gene036253:intron | 30.0% | |
| CAGATTTCAATTTGGATGAT+TGG | + | chr1.3:52427242-52427261 | None:intergenic | 30.0% | |
| CCACTATGAACATATTTCTT+AGG | - | chr1.3:52428948-52428967 | MS.gene036253:CDS | 30.0% | |
| CCTAAGAAATATGTTCATAG+TGG | + | chr1.3:52428951-52428970 | None:intergenic | 30.0% | |
| GCAATCACAATATATATGGT+GGG | + | chr1.3:52427708-52427727 | None:intergenic | 30.0% | |
| GTCTTCATAATAACTCAATC+TGG | + | chr1.3:52427648-52427667 | None:intergenic | 30.0% | |
| TAATAGTAGCATCAGATTTG+TGG | + | chr1.3:52428483-52428502 | None:intergenic | 30.0% | |
| TATGTAAGCAGATAATTACG+TGG | + | chr1.3:52427219-52427238 | None:intergenic | 30.0% | |
| TATGTACTTTCTCTTGATGT+TGG | - | chr1.3:52426886-52426905 | MS.gene036253:intron | 30.0% | |
| TCAAAACAGAATGGATCAAT+AGG | + | chr1.3:52427579-52427598 | None:intergenic | 30.0% | |
| TCAAACAAAAGCTCAAATGT+GGG | + | chr1.3:52428699-52428718 | None:intergenic | 30.0% | |
| TGATTCAGTCGAAATAGATT+GGG | - | chr1.3:52427142-52427161 | MS.gene036253:intron | 30.0% | |
| TGGTTGTGTTAATAACCTTT+AGG | - | chr1.3:52427983-52428002 | MS.gene036253:CDS | 30.0% | |
| TTGATTCAGTCGAAATAGAT+TGG | - | chr1.3:52427141-52427160 | MS.gene036253:intron | 30.0% | |
| TTTCGACTGAATCAATGAAT+TGG | + | chr1.3:52427136-52427155 | None:intergenic | 30.0% | |
| ! | ATATTGCAGTTTGTTCATCA+GGG | - | chr1.3:52426916-52426935 | MS.gene036253:intron | 30.0% |
| ! | CCAATATGGTACTATCTTTT+GGG | + | chr1.3:52428086-52428105 | None:intergenic | 30.0% |
| ! | GAATTGGAAATGGATGTTTT+GGG | - | chr1.3:52426336-52426355 | MS.gene036253:intron | 30.0% |
| ! | TCCAATATGGTACTATCTTT+TGG | + | chr1.3:52428087-52428106 | None:intergenic | 30.0% |
| ! | TGAATTGGAAATGGATGTTT+TGG | - | chr1.3:52426335-52426354 | MS.gene036253:intron | 30.0% |
| ! | TTTGTTGTCTGAATTGGAAA+TGG | - | chr1.3:52426326-52426345 | MS.gene036253:intron | 30.0% |
| !! | ATCCATTCTGTTTTGAGTAT+CGG | - | chr1.3:52427583-52427602 | MS.gene036253:intron | 30.0% |
| !! | CAAGTTCTGACTTTGTATTT+TGG | + | chr1.3:52428728-52428747 | None:intergenic | 30.0% |
| !! | CTGATTTTGACATGACAATT+CGG | - | chr1.3:52428754-52428773 | MS.gene036253:intron | 30.0% |
| !! | TTAATTTGTTGCTGATTTGC+AGG | - | chr1.3:52428985-52429004 | MS.gene036253:CDS | 30.0% |
| !! | TTTTTATTCTGGTGACTTGT+TGG | - | chr1.3:52426835-52426854 | MS.gene036253:intron | 30.0% |
| !!! | TTTTTTGCAGCATCTTCTAT+TGG | - | chr1.3:52427963-52427982 | MS.gene036253:CDS | 30.0% |
| AAAAATGAGCAAGCAAGGTA+AGG | + | chr1.3:52427293-52427312 | None:intergenic | 35.0% | |
| AAACCAAAGGTCATATGTCA+TGG | + | chr1.3:52428205-52428224 | None:intergenic | 35.0% | |
| AATCTGGTATTCAGGTCTAA+TGG | - | chr1.3:52427546-52427565 | MS.gene036253:intron | 35.0% | |
| ACAGGACAGTGTAACTTATA+TGG | + | chr1.3:52427370-52427389 | None:intergenic | 35.0% | |
| ACTCCTTATTATCAACCCAA+TGG | + | chr1.3:52428247-52428266 | None:intergenic | 35.0% | |
| ACTTTCGAATGTACTTCCAT+TGG | - | chr1.3:52428228-52428247 | MS.gene036253:intron | 35.0% | |
| AGACAATAGCTAGCTAAAGT+TGG | + | chr1.3:52427888-52427907 | None:intergenic | 35.0% | |
| AGAGAAAGAGTGAGAAGATT+AGG | + | chr1.3:52427807-52427826 | None:intergenic | 35.0% | |
| AGGACTGATATGTTTAGAGA+TGG | - | chr1.3:52428115-52428134 | MS.gene036253:intron | 35.0% | |
| AGTACTCTGACGATATAACA+TGG | + | chr1.3:52428813-52428832 | None:intergenic | 35.0% | |
| AGTACTGTTATGCATTCTAC+TGG | + | chr1.3:52428041-52428060 | None:intergenic | 35.0% | |
| ATACAAGTAGAACAGGACAA+AGG | + | chr1.3:52428551-52428570 | None:intergenic | 35.0% | |
| ATACCATGACATATGACCTT+TGG | - | chr1.3:52428199-52428218 | MS.gene036253:intron | 35.0% | |
| ATCTCTAAACATATCAGTCC+TGG | + | chr1.3:52428116-52428135 | None:intergenic | 35.0% | |
| ATCTGGTATTCAGGTCTAAT+GGG | - | chr1.3:52427547-52427566 | MS.gene036253:intron | 35.0% | |
| CAGAAATAATGACAGGATCA+TGG | + | chr1.3:52428364-52428383 | None:intergenic | 35.0% | |
| CAGGACAGTGTAACTTATAT+GGG | + | chr1.3:52427369-52427388 | None:intergenic | 35.0% | |
| CCCAAAAGATAGTACCATAT+TGG | - | chr1.3:52428083-52428102 | MS.gene036253:intron | 35.0% | |
| CTAATTTATATGATGCTGGG+TGG | - | chr1.3:52426103-52426122 | MS.gene036253:intron | 35.0% | |
| CTGAAAATAATCTGGATGTC+TGG | - | chr1.3:52428659-52428678 | MS.gene036253:intron | 35.0% | |
| CTTTCGAATGTACTTCCATT+GGG | - | chr1.3:52428229-52428248 | MS.gene036253:intron | 35.0% | |
| GAAAACAGGGAGATAGAAAT+CGG | + | chr1.3:52427784-52427803 | None:intergenic | 35.0% | |
| GAGAAAGAGTGAGAAGATTA+GGG | + | chr1.3:52427806-52427825 | None:intergenic | 35.0% | |
| GAGAAGAGAAAGACCATTAA+TGG | - | chr1.3:52426391-52426410 | MS.gene036253:intron | 35.0% | |
| GATAATTACGTGGATAATCC+TGG | + | chr1.3:52427209-52427228 | None:intergenic | 35.0% | |
| GATTCAGTCGAAATAGATTG+GGG | - | chr1.3:52427143-52427162 | MS.gene036253:intron | 35.0% | |
| GCTGTTCAGTGGTATTATAT+AGG | - | chr1.3:52428516-52428535 | MS.gene036253:intron | 35.0% | |
| GGACTGATATGTTTAGAGAT+GGG | - | chr1.3:52428116-52428135 | MS.gene036253:intron | 35.0% | |
| GGTTGAGACTGAAAATAATC+TGG | - | chr1.3:52428651-52428670 | MS.gene036253:intron | 35.0% | |
| GTACTGTTATGCATTCTACT+GGG | + | chr1.3:52428040-52428059 | None:intergenic | 35.0% | |
| GTTCATGATACAAGTAGAAC+AGG | + | chr1.3:52428558-52428577 | None:intergenic | 35.0% | |
| TAGAGAACAACCAAACACAT+CGG | + | chr1.3:52428616-52428635 | None:intergenic | 35.0% | |
| TATCTCAGTCTAACTATCCA+GGG | - | chr1.3:52427407-52427426 | MS.gene036253:intron | 35.0% | |
| TATTCGATTGAGTAACACTC+CGG | - | chr1.3:52428590-52428609 | MS.gene036253:intron | 35.0% | |
| TCGACATTTCAAAATCACCA+GGG | + | chr1.3:52426581-52426600 | None:intergenic | 35.0% | |
| TCTCTAAACATATCAGTCCT+GGG | + | chr1.3:52428115-52428134 | None:intergenic | 35.0% | |
| TGAGAAGATTAGGGAAAACA+GGG | + | chr1.3:52427797-52427816 | None:intergenic | 35.0% | |
| TGGAAAAAAATGAGCAAGCA+AGG | + | chr1.3:52427298-52427317 | None:intergenic | 35.0% | |
| TGTTATGCAGCTGTTAGATT+CGG | + | chr1.3:52427923-52427942 | None:intergenic | 35.0% | |
| TTAATAACCTTTAGGCCTGA+AGG | - | chr1.3:52427991-52428010 | MS.gene036253:CDS | 35.0% | |
| TTATCTCAGTCTAACTATCC+AGG | - | chr1.3:52427406-52427425 | MS.gene036253:intron | 35.0% | |
| TTATTGGCATTTGGGTCTAT+TGG | - | chr1.3:52426055-52426074 | MS.gene036253:intron | 35.0% | |
| TTCTGATAGGGTGATAGTAA+AGG | - | chr1.3:52426712-52426731 | MS.gene036253:intron | 35.0% | |
| ! | AGCTAACCATAGCCTTAAAT+TGG | + | chr1.3:52427110-52427129 | None:intergenic | 35.0% |
| ! | AGTTTGGAGTATGAGATAAG+TGG | + | chr1.3:52427469-52427488 | None:intergenic | 35.0% |
| ! | ATGTTGCCAATTTAAGGCTA+TGG | - | chr1.3:52427101-52427120 | MS.gene036253:intron | 35.0% |
| ! | CATATTGCAGTTTGTTCATC+AGG | - | chr1.3:52426915-52426934 | MS.gene036253:intron | 35.0% |
| ! | CTGACGATATAACATGGTTT+TGG | + | chr1.3:52428807-52428826 | None:intergenic | 35.0% |
| ! | GCTGGGTGGAAAATATTTTA+GGG | - | chr1.3:52426117-52426136 | MS.gene036253:intron | 35.0% |
| ! | TGCTGGGTGGAAAATATTTT+AGG | - | chr1.3:52426116-52426135 | MS.gene036253:intron | 35.0% |
| ! | TTCGCAATTTTCCCATTTGA+AGG | + | chr1.3:52425854-52425873 | None:intergenic | 35.0% |
| ! | TTTGAGATCGTGTATTTCCT+GGG | - | chr1.3:52427333-52427352 | MS.gene036253:intron | 35.0% |
| !! | AGATGATTTGTTATGGGCTA+TGG | - | chr1.3:52426414-52426433 | MS.gene036253:intron | 35.0% |
| !! | ATGAAAATTAGAAGAGCACC+AGG | + | chr1.3:52428387-52428406 | None:intergenic | 35.0% |
| !! | CTTCCATTGGGTTGATAATA+AGG | - | chr1.3:52428241-52428260 | MS.gene036253:intron | 35.0% |
| !! | GTTGATAATAAGGAGTCACT+GGG | - | chr1.3:52428251-52428270 | MS.gene036253:intron | 35.0% |
| !! | TTTGAGCTATATTGATTCCC+AGG | - | chr1.3:52426942-52426961 | MS.gene036253:intron | 35.0% |
| !!! | ATTGTGGTTTTTGGCAAATG+TGG | - | chr1.3:52426220-52426239 | MS.gene036253:intron | 35.0% |
| !!! | GGTAAGCTAGATTGTTTTTG+TGG | + | chr1.3:52428286-52428305 | None:intergenic | 35.0% |
| !!! | TCTGTAATTTTGCTGTTCAG+TGG | - | chr1.3:52428505-52428524 | MS.gene036253:intron | 35.0% |
| !!! | TGGTGATTTTGAAATGTCGA+CGG | - | chr1.3:52426581-52426600 | MS.gene036253:intron | 35.0% |
| AACATGCCAAGAGTTACTCT+TGG | - | chr1.3:52427670-52427689 | MS.gene036253:intron | 40.0% | |
| AATACAATCAATCAGAGGGG+AGG | + | chr1.3:52426632-52426651 | None:intergenic | 40.0% | |
| ACCTTAGACTATCTTGCCAA+TGG | - | chr1.3:52426664-52426683 | MS.gene036253:intron | 40.0% | |
| ACTAAGTGTGACAAACAAGG+TGG | + | chr1.3:52428459-52428478 | None:intergenic | 40.0% | |
| AGACAGAGAGATTGTTACCT+GGG | + | chr1.3:52426962-52426981 | None:intergenic | 40.0% | |
| CAAACATTGGGTGAATGTTG+TGG | + | chr1.3:52427517-52427536 | None:intergenic | 40.0% | |
| CACAGATGTTAGCATTCCAT+TGG | + | chr1.3:52426683-52426702 | None:intergenic | 40.0% | |
| CCAGGGAAGAAGGAAAAAAA+CGG | + | chr1.3:52426564-52426583 | None:intergenic | 40.0% | |
| CTAAGTGTGACAAACAAGGT+GGG | + | chr1.3:52428458-52428477 | None:intergenic | 40.0% | |
| GCAATATGGTACTATCCTTC+AGG | + | chr1.3:52428009-52428028 | None:intergenic | 40.0% | |
| GGATCTGTTAGAAACAGTGA+TGG | - | chr1.3:52426733-52426752 | MS.gene036253:intron | 40.0% | |
| GGTACTAAGTGTGACAAACA+AGG | + | chr1.3:52428462-52428481 | None:intergenic | 40.0% | |
| GTCGACATTTCAAAATCACC+AGG | + | chr1.3:52426582-52426601 | None:intergenic | 40.0% | |
| GTCGAGAAAAAAAAGTTCCC+TGG | + | chr1.3:52427427-52427446 | None:intergenic | 40.0% | |
| GTGAGAAGATTAGGGAAAAC+AGG | + | chr1.3:52427798-52427817 | None:intergenic | 40.0% | |
| GTGTTTGGTTGTTCTCTATC+TGG | - | chr1.3:52428618-52428637 | MS.gene036253:intron | 40.0% | |
| TACCATATTGGAATTCACCC+AGG | - | chr1.3:52428095-52428114 | MS.gene036253:intron | 40.0% | |
| TATCACCCTATCAGAAACCA+TGG | + | chr1.3:52426708-52426727 | None:intergenic | 40.0% | |
| TCACCGAACTCTTATCTGAT+TGG | - | chr1.3:52427183-52427202 | MS.gene036253:intron | 40.0% | |
| TCCATTGGCAAGATAGTCTA+AGG | + | chr1.3:52426668-52426687 | None:intergenic | 40.0% | |
| TCTCTATCTGGCTAACTCTA+CGG | - | chr1.3:52428630-52428649 | MS.gene036253:intron | 40.0% | |
| TGAATGTTGTGGAGCAGAAT+GGG | + | chr1.3:52427506-52427525 | None:intergenic | 40.0% | |
| TGCCGATACTCAAAACAGAA+TGG | + | chr1.3:52427588-52427607 | None:intergenic | 40.0% | |
| TGGCCAAAAAAGAGATCTTG+AGG | + | chr1.3:52427449-52427468 | None:intergenic | 40.0% | |
| TGGCCAATCAGATAAGAGTT+CGG | + | chr1.3:52427189-52427208 | None:intergenic | 40.0% | |
| TGGTCTTTCTCTTCTCTTTC+TGG | + | chr1.3:52426387-52426406 | None:intergenic | 40.0% | |
| TTCAAAATCACCAGGGAAGA+AGG | + | chr1.3:52426574-52426593 | None:intergenic | 40.0% | |
| ! | GTTTGAGATCGTGTATTTCC+TGG | - | chr1.3:52427332-52427351 | MS.gene036253:intron | 40.0% |
| ! | TTATGGGCTATGGCTACTTT+AGG | - | chr1.3:52426424-52426443 | MS.gene036253:intron | 40.0% |
| !! | ATCCTGTCATTATTTCTGCC+TGG | - | chr1.3:52428366-52428385 | MS.gene036253:CDS | 40.0% |
| !! | ATGGTACTATCTTTTGGGTC+TGG | + | chr1.3:52428081-52428100 | None:intergenic | 40.0% |
| !! | GGTTGATAATAAGGAGTCAC+TGG | - | chr1.3:52428250-52428269 | MS.gene036253:intron | 40.0% |
| !! | GTGACTTGTTGGTCAAAACA+AGG | - | chr1.3:52426846-52426865 | MS.gene036253:intron | 40.0% |
| !! | GTTAGAAACAGTGATGGATC+TGG | - | chr1.3:52426739-52426758 | MS.gene036253:intron | 40.0% |
| !! | TATCTTTTGGGTCTGGTCTA+GGG | + | chr1.3:52428074-52428093 | None:intergenic | 40.0% |
| !! | TGGAAATGGATGTTTTGGGT+TGG | - | chr1.3:52426340-52426359 | MS.gene036253:intron | 40.0% |
| !!! | CGACCTCAAGATCTCTTTTT+TGG | - | chr1.3:52427443-52427462 | MS.gene036253:intron | 40.0% |
| !!! | GATGTTTTGGGTTGGTTGTA+GGG | - | chr1.3:52426348-52426367 | MS.gene036253:intron | 40.0% |
| AGTCGAAATAGATTGGGGAC+AGG | - | chr1.3:52427148-52427167 | MS.gene036253:intron | 45.0% | |
| ATATGGGAAGATGAGTACCC+AGG | + | chr1.3:52427353-52427372 | None:intergenic | 45.0% | |
| ATGCTAACATCTGTGAGCCA+TGG | - | chr1.3:52426688-52426707 | MS.gene036253:intron | 45.0% | |
| CACCAGGCAGAAATAATGAC+AGG | + | chr1.3:52428371-52428390 | None:intergenic | 45.0% | |
| CACTTAAGGTGTACCTAGCA+AGG | - | chr1.3:52426467-52426486 | MS.gene036253:intron | 45.0% | |
| CCAACTCCAAGAGTAACTCT+TGG | + | chr1.3:52427679-52427698 | None:intergenic | 45.0% | |
| CCAAGAGTTACTCTTGGAGT+TGG | - | chr1.3:52427676-52427695 | MS.gene036253:intron | 45.0% | |
| CTTGCTAGGTACACCTTAAG+TGG | + | chr1.3:52426469-52426488 | None:intergenic | 45.0% | |
| GAATGTTGTGGAGCAGAATG+GGG | + | chr1.3:52427505-52427524 | None:intergenic | 45.0% | |
| GAGACAGAGAGATTGTTACC+TGG | + | chr1.3:52426963-52426982 | None:intergenic | 45.0% | |
| GAGATAAAAACCCTGCATGC+AGG | + | chr1.3:52427393-52427412 | None:intergenic | 45.0% | |
| GCATTTGCTCTCAAGCAACT+TGG | + | chr1.3:52428307-52428326 | None:intergenic | 45.0% | |
| GCTGAGTGGAGTTTAGTGAT+AGG | - | chr1.3:52428325-52428344 | MS.gene036253:CDS | 45.0% | |
| GTACTATCCTTCAGGCCTAA+AGG | + | chr1.3:52428001-52428020 | None:intergenic | 45.0% | |
| GTCCTGGGTGAATTCCAATA+TGG | + | chr1.3:52428100-52428119 | None:intergenic | 45.0% | |
| GTGAATGTTGTGGAGCAGAA+TGG | + | chr1.3:52427507-52427526 | None:intergenic | 45.0% | |
| GTGAGCCATGGTTTCTGATA+GGG | - | chr1.3:52426700-52426719 | MS.gene036253:intron | 45.0% | |
| TCGACGGATATCACAGTTAG+AGG | - | chr1.3:52426597-52426616 | MS.gene036253:intron | 45.0% | |
| TGTGAGCCATGGTTTCTGAT+AGG | - | chr1.3:52426699-52426718 | MS.gene036253:intron | 45.0% | |
| TTACCTCTCTGAACCTTGCT+AGG | + | chr1.3:52426483-52426502 | None:intergenic | 45.0% | |
| ! | GAACTCTTATCTGATTGGCC+AGG | - | chr1.3:52427188-52427207 | MS.gene036253:intron | 45.0% |
| ! | GAAGGCATAACCAGATGTTG+TGG | + | chr1.3:52429016-52429035 | None:intergenic | 45.0% |
| !! | ATCTTTTGGGTCTGGTCTAG+GGG | + | chr1.3:52428073-52428092 | None:intergenic | 45.0% |
| !! | CTATCTTTTGGGTCTGGTCT+AGG | + | chr1.3:52428075-52428094 | None:intergenic | 45.0% |
| !! | TGGCTTTCTTCGCATTGGTT+CGG | + | chr1.3:52425725-52425744 | None:intergenic | 45.0% |
| !!! | CCGTTTTTTTCCTTCTTCCC+TGG | - | chr1.3:52426561-52426580 | MS.gene036253:intron | 45.0% |
| !!! | GGATGTTTTGGGTTGGTTGT+AGG | - | chr1.3:52426347-52426366 | MS.gene036253:intron | 45.0% |
| !! | TAAAAAAATAAAAAATACTA+TGG | + | chr1.3:52425956-52425975 | None:intergenic | 5.0% |
| AAAAACCCTGCATGCAGGAC+AGG | + | chr1.3:52427388-52427407 | None:intergenic | 50.0% | |
| ATCTCTAGCCTCGTGATTGG+TGG | + | chr1.3:52428181-52428200 | None:intergenic | 50.0% | |
| ATGCATTCTACTGGGTGCTC+TGG | + | chr1.3:52428032-52428051 | None:intergenic | 50.0% | |
| GAACAACCAAACACATCGGC+CGG | + | chr1.3:52428612-52428631 | None:intergenic | 50.0% | |
| GCTTGAGAGCAAATGCTGAG+TGG | - | chr1.3:52428311-52428330 | MS.gene036253:CDS | 50.0% | |
| GGTATCTCTAGCCTCGTGAT+TGG | + | chr1.3:52428184-52428203 | None:intergenic | 50.0% | |
| GTACCTAGCAAGGTTCAGAG+AGG | - | chr1.3:52426477-52426496 | MS.gene036253:intron | 50.0% | |
| TCCTCCAGGTCAAAATGCTC+AGG | - | chr1.3:52426783-52426802 | MS.gene036253:intron | 50.0% | |
| TCTCGTGGCTTTCTTCGCAT+TGG | + | chr1.3:52425730-52425749 | None:intergenic | 50.0% | |
| TCTGGTAGACGAGACCAAGT+TGG | - | chr1.3:52426757-52426776 | MS.gene036253:intron | 50.0% | |
| TGCATTCTACTGGGTGCTCT+GGG | + | chr1.3:52428031-52428050 | None:intergenic | 50.0% | |
| ! | GTTTGAAGCCACCAATCACG+AGG | - | chr1.3:52428170-52428189 | MS.gene036253:intron | 50.0% |
| !! | ACCTGAGCATTTTGACCTGG+AGG | + | chr1.3:52426787-52426806 | None:intergenic | 50.0% |
| !! | CACACCTGAGCATTTTGACC+TGG | + | chr1.3:52426790-52426809 | None:intergenic | 50.0% |
| AACACTCCGGCCGATGTGTT+TGG | - | chr1.3:52428603-52428622 | MS.gene036253:intron | 55.0% | |
| ACTGTCCTGTCCTGCATGCA+GGG | - | chr1.3:52427380-52427399 | MS.gene036253:intron | 55.0% | |
| GAAGAAAGCCACGAGAGTGG+TGG | - | chr1.3:52425734-52425753 | MS.gene036253:CDS | 55.0% | |
| GAAGCAGAAGAAGAGCCACG+TGG | + | chr1.3:52425770-52425789 | None:intergenic | 55.0% | |
| GCAGGTGCATCCACAACATC+TGG | - | chr1.3:52429003-52429022 | MS.gene036253:CDS | 55.0% | |
| TCTGTTCACCACCACTCTCG+TGG | + | chr1.3:52425745-52425764 | None:intergenic | 55.0% | |
| TGCGAAGAAAGCCACGAGAG+TGG | - | chr1.3:52425731-52425750 | MS.gene036253:CDS | 55.0% | |
| TGGAATTGGGTCTCACTCGC+TGG | + | chr1.3:52425930-52425949 | None:intergenic | 55.0% | |
| TTGTGGAGCAGAATGGGGAC+TGG | + | chr1.3:52427500-52427519 | None:intergenic | 55.0% | |
| ! | ACTGGGTGCTCTGGGCAATA+TGG | + | chr1.3:52428023-52428042 | None:intergenic | 55.0% |
| ! | GGTAGACGAGACCAAGTTGG+CGG | - | chr1.3:52426760-52426779 | MS.gene036253:intron | 55.0% |
| CACTGTCCTGTCCTGCATGC+AGG | - | chr1.3:52427379-52427398 | MS.gene036253:intron | 60.0% | |
| GGTGGTGAACAGAGTCCACG+TGG | - | chr1.3:52425752-52425771 | MS.gene036253:intron | 60.0% | |
| TGGAGCAGAATGGGGACTGG+TGG | + | chr1.3:52427497-52427516 | None:intergenic | 60.0% | |
| ! | GAGCAGAATGGGGACTGGTG+GGG | + | chr1.3:52427495-52427514 | None:intergenic | 60.0% |
| ! | GGAGCAGAATGGGGACTGGT+GGG | + | chr1.3:52427496-52427515 | None:intergenic | 60.0% |
| ! | GGGACTGGTGGGGATGAGTT+TGG | + | chr1.3:52427485-52427504 | None:intergenic | 60.0% |
| GACCTGGAGGACCGCCAACT+TGG | + | chr1.3:52426774-52426793 | None:intergenic | 65.0% | |
| ! | GACCAAGTTGGCGGTCCTCC+AGG | - | chr1.3:52426769-52426788 | MS.gene036253:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 52425710 | 52429054 | 52425710 | ID=MS.gene036253 |
| chr1.3 | mRNA | 52425710 | 52429054 | 52425710 | ID=MS.gene036253.t1;Parent=MS.gene036253 |
| chr1.3 | exon | 52428831 | 52429054 | 52428831 | ID=MS.gene036253.t1.exon1;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52428831 | 52429054 | 52428831 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| chr1.3 | exon | 52428266 | 52428395 | 52428266 | ID=MS.gene036253.t1.exon2;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52428266 | 52428395 | 52428266 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| chr1.3 | exon | 52428146 | 52428151 | 52428146 | ID=MS.gene036253.t1.exon3;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52428146 | 52428151 | 52428146 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| chr1.3 | exon | 52427960 | 52428043 | 52427960 | ID=MS.gene036253.t1.exon4;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52427960 | 52428043 | 52427960 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| chr1.3 | exon | 52427801 | 52427839 | 52427801 | ID=MS.gene036253.t1.exon5;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52427801 | 52427839 | 52427801 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| chr1.3 | exon | 52425710 | 52425757 | 52425710 | ID=MS.gene036253.t1.exon6;Parent=MS.gene036253.t1 |
| chr1.3 | CDS | 52425710 | 52425757 | 52425710 | ID=cds.MS.gene036253.t1;Parent=MS.gene036253.t1 |
| Gene Sequence |
| Protein sequence |
