AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036303

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036303.t1 MTR_5g030130 98.734 237 3 0 1 237 1 237 1.95e-180 494
MS.gene036303.t1 MTR_8g066820 85.294 238 31 3 1 237 1 235 7.39e-142 396
MS.gene036303.t1 MTR_5g030130 98.765 162 2 0 1 162 1 162 2.45e-122 345
MS.gene036303.t1 MTR_4g078170 73.500 200 51 1 33 232 13 210 9.64e-110 315
MS.gene036303.t1 MTR_5g007230 70.283 212 54 3 21 232 7 209 1.48e-107 309
MS.gene036303.t1 MTR_1g062160 54.680 203 79 4 35 231 7 202 7.72e-72 218
MS.gene036303.t1 MTR_7g102790 58.000 200 78 3 35 231 7 203 2.53e-70 214
MS.gene036303.t1 MTR_2g060540 50.000 140 60 4 31 160 6 145 4.44e-42 140
MS.gene036303.t1 MTR_2g060500 48.571 140 62 3 31 160 6 145 9.70e-42 139
MS.gene036303.t1 MTR_2g084495 36.000 225 114 5 36 230 5 229 1.23e-40 139
MS.gene036303.t1 MTR_2g055210 33.212 274 133 6 1 230 72 339 9.31e-39 137
MS.gene036303.t1 MTR_4g116300 45.185 135 73 1 35 169 6 139 1.24e-35 127
MS.gene036303.t1 MTR_4g094680 35.616 219 120 5 32 230 19 236 2.37e-35 125
MS.gene036303.t1 MTR_2g084525 47.183 142 65 4 36 167 5 146 2.64e-35 126
MS.gene036303.t1 MTR_2g084510 33.473 239 114 5 36 230 4 241 1.10e-34 124
MS.gene036303.t1 MTR_2g036170 32.018 228 110 6 35 230 37 251 3.83e-28 107
MS.gene036303.t1 MTR_8g105930 35.616 146 71 5 37 161 15 158 1.25e-17 79.3
MS.gene036303.t1 MTR_8g097310 31.677 161 95 6 74 230 4 153 2.73e-15 71.2
MS.gene036303.t1 MTR_5g077740 25.871 201 107 8 35 230 23 186 6.61e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036303.t1 AT4G17900 74.249 233 52 4 1 231 1 227 3.96e-126 357
MS.gene036303.t1 AT4G17900 73.762 202 46 3 32 231 17 213 8.82e-107 307
MS.gene036303.t1 AT1G32700 72.093 215 55 2 25 237 2 213 4.11e-105 303
MS.gene036303.t1 AT1G32700 73.446 177 42 2 63 237 1 174 1.54e-82 244
MS.gene036303.t1 AT5G46710 53.191 235 95 6 1 230 1 225 1.43e-80 241
MS.gene036303.t1 AT1G21000 48.750 240 84 4 28 230 6 243 3.82e-76 230
MS.gene036303.t1 AT1G21000 48.750 240 84 4 28 230 9 246 4.34e-76 230
MS.gene036303.t1 AT5G46710 52.404 208 91 4 28 230 5 209 6.94e-73 221
MS.gene036303.t1 AT1G76590 49.130 230 81 2 35 230 18 245 5.75e-72 220
MS.gene036303.t1 AT5G46710 60.494 162 56 3 1 161 1 155 4.21e-68 207
MS.gene036303.t1 AT1G43000 47.907 215 100 2 28 230 9 223 6.09e-68 209
MS.gene036303.t1 AT1G43000 47.907 215 100 2 28 230 2 216 7.30e-68 208
MS.gene036303.t1 AT2G27930 45.673 208 81 5 35 232 4 189 3.57e-52 167
MS.gene036303.t1 AT2G27930 45.673 208 81 5 35 232 4 189 3.57e-52 167
MS.gene036303.t1 AT2G27930 54.745 137 52 2 35 161 4 140 2.21e-47 154
MS.gene036303.t1 AT2G27930 54.745 137 52 2 35 161 4 140 2.21e-47 154
MS.gene036303.t1 AT2G12646 46.667 135 71 1 35 169 3 136 1.55e-36 129
MS.gene036303.t1 AT2G12646 46.667 135 71 1 35 169 6 139 1.74e-36 129
MS.gene036303.t1 AT2G12646 46.667 135 71 1 35 169 6 139 1.74e-36 129
MS.gene036303.t1 AT1G31040 35.398 226 114 4 35 230 19 242 2.19e-36 129
MS.gene036303.t1 AT3G60670 45.455 132 71 1 30 161 2 132 1.45e-34 124
MS.gene036303.t1 AT2G27930 47.403 154 50 4 88 232 61 192 3.76e-34 121
MS.gene036303.t1 AT2G27930 47.403 154 50 4 88 232 61 192 3.76e-34 121
MS.gene036303.t1 AT2G01818 33.953 215 115 9 37 230 13 221 2.01e-21 89.4
MS.gene036303.t1 AT2G01818 33.766 154 80 7 94 230 9 157 3.22e-11 60.5

Find 57 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATGATTCTCCTGTTCTT+TGG 0.256621 5.3:+19072403 None:intergenic
GTGACACCTTTCCCTGGCCT+TGG 0.315597 5.3:+19071568 None:intergenic
TGGTATTCCCTTTCTTCTCT+TGG 0.322835 5.3:+19070822 None:intergenic
TGGTTTGATTTCTCTGACAC+TGG 0.330907 5.3:+19072423 None:intergenic
TCCTTCCGGTTCTGTTCTCT+TGG 0.350274 5.3:-19071508 MS.gene036303:CDS
CAAAGACCACCGTTACATTC+AGG 0.356801 5.3:-19072080 MS.gene036303:intron
TTCTGTAATTAACTGAAGTT+GGG 0.357223 5.3:+19070848 None:intergenic
CCTTTCCCTGGCCTTGGTTG+AGG 0.360388 5.3:+19071574 None:intergenic
CAGAAGCACTTGGACATTGC+TGG 0.371556 5.3:-19071649 MS.gene036303:CDS
GTAGCCTTCTTGATTCCTTC+CGG 0.377067 5.3:-19071522 MS.gene036303:CDS
GTTCTGTAATTAACTGAAGT+TGG 0.401937 5.3:+19070847 None:intergenic
CTTCATACCATGATGTGATA+AGG 0.416229 5.3:-19071684 MS.gene036303:CDS
TGAATGTAATATGTATTGTT+TGG 0.429253 5.3:-19072146 MS.gene036303:CDS
CCTTGCACTGTTGATAATGT+AGG 0.430360 5.3:+19071618 None:intergenic
TATTGTTTGGATTGTATGAA+TGG 0.430470 5.3:-19072133 MS.gene036303:CDS
CTAAGAACTTCCAGAAGAAA+AGG 0.442353 5.3:-19070981 MS.gene036303:CDS
GAGAAATCAAACCAAAGAAC+AGG 0.443596 5.3:-19072414 MS.gene036303:CDS
ATACCACATAGAGCCCCATT+GGG 0.447453 5.3:-19070805 MS.gene036303:CDS
TTCATACCATGATGTGATAA+GGG 0.458976 5.3:-19071683 MS.gene036303:CDS
TGCAACCAAGAGAACAGAAC+CGG 0.486127 5.3:+19071503 None:intergenic
GTGTTTGTGACACCTTTCCC+TGG 0.486272 5.3:+19071562 None:intergenic
AGAACAGCCAAGAGAAGAAA+GGG 0.492152 5.3:-19070829 MS.gene036303:CDS
CAGAACAGCCAAGAGAAGAA+AGG 0.499241 5.3:-19070830 MS.gene036303:CDS
GAATGTAACGGTGGTCTTTG+TGG 0.500381 5.3:+19072083 None:intergenic
GTTCTGTTCTCTTGGTTGCA+AGG 0.507358 5.3:-19071500 MS.gene036303:intron
GAAAGGCCTCAACCAAGGCC+AGG 0.510556 5.3:-19071580 MS.gene036303:CDS
CATCTGTTATCATCATCATC+AGG 0.523367 5.3:+19072244 None:intergenic
AATACCACATAGAGCCCCAT+TGG 0.536612 5.3:-19070806 MS.gene036303:CDS
TTCAACAATGGTTTCAACCA+TGG 0.537430 5.3:+19072217 None:intergenic
GGGTTGTGTTCTTGAATGAA+AGG 0.538393 5.3:-19071597 MS.gene036303:CDS
AAGAAAGCTTCTTTCAACAA+TGG 0.545716 5.3:+19072205 None:intergenic
CATTCACCCTTATCACATCA+TGG 0.546598 5.3:+19071677 None:intergenic
ACCAAAGAACAGGAGAATCA+TGG 0.546667 5.3:-19072404 MS.gene036303:intron
TATGGTTTGAACAGATTAGG+AGG 0.550366 5.3:-19071708 MS.gene036303:intron
GAATGTGAATTGCAGATTGT+GGG 0.552420 5.3:-19071009 MS.gene036303:intron
CCTACATTATCAACAGTGCA+AGG 0.564703 5.3:-19071618 MS.gene036303:CDS
AAAGGCCTCAACCAAGGCCA+GGG 0.571397 5.3:-19071579 MS.gene036303:CDS
AAGGAGACAATTAACAGCAA+TGG 0.585369 5.3:-19070962 MS.gene036303:CDS
GAATGAGATTCAGAAGCACT+TGG 0.586269 5.3:-19071659 MS.gene036303:CDS
CCTCAACCAAGGCCAGGGAA+AGG 0.593312 5.3:-19071574 MS.gene036303:CDS
AGCAATGGCATCAGATTCTG+AGG 0.610535 5.3:-19070947 MS.gene036303:CDS
AACAATGGTTTCAACCATGG+TGG 0.622605 5.3:+19072220 None:intergenic
GAAGACAAACCTGAATGTAA+CGG 0.653422 5.3:+19072071 None:intergenic
TGAATGAAAGGCCTCAACCA+AGG 0.654295 5.3:-19071585 MS.gene036303:CDS
AGAACCGGAAGGAATCAAGA+AGG 0.656588 5.3:+19071518 None:intergenic
CTACATTATCAACAGTGCAA+GGG 0.657965 5.3:-19071617 MS.gene036303:CDS
ACCACATAGAGCCCCATTGG+GGG 0.661326 5.3:-19070803 MS.gene036303:CDS
TACCACATAGAGCCCCATTG+GGG 0.680294 5.3:-19070804 MS.gene036303:CDS
CCACATAGAGCCCCATTGGG+GGG 0.682285 5.3:-19070802 MS.gene036303:CDS
ATGATAACAGATGGCCACCA+TGG 0.683499 5.3:-19072234 MS.gene036303:CDS
ACCAAGAGAACAGAACCGGA+AGG 0.684862 5.3:+19071507 None:intergenic
TCTGTAATTAACTGAAGTTG+GGG 0.688523 5.3:+19070849 None:intergenic
AATGTGAATTGCAGATTGTG+GGG 0.690938 5.3:-19071008 MS.gene036303:intron
CTGATGATGATGATAACAGA+TGG 0.692210 5.3:-19072243 MS.gene036303:CDS
GACAAACCTGAATGTAACGG+TGG 0.716496 5.3:+19072074 None:intergenic
GCAAGACAGAGAGAACAGAG+AGG 0.742658 5.3:+19072109 None:intergenic
CTGTAATTAACTGAAGTTGG+GGG 0.746847 5.3:+19070850 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTGATGAGAATACAT+TGG + chr5.3:19071786-19071805 None:intergenic 20.0%
!! AATTAAACATTAGACATCAA+TGG + chr5.3:19071479-19071498 None:intergenic 20.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5.3:19071085-19071104 MS.gene036303:intron 20.0%
!!! CTAAAGTTTGTTTTTTTGTA+TGG - chr5.3:19071505-19071524 MS.gene036303:CDS 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5.3:19071991-19072010 MS.gene036303:intron 20.0%
!!! GTTCTGTTTTTATTGATTTT+TGG - chr5.3:19070936-19070955 MS.gene036303:CDS 20.0%
!!! TTTGGTTTGATTTTTGATTA+GGG - chr5.3:19070954-19070973 MS.gene036303:CDS 20.0%
!!! TTTTGGTTTGATTTTTGATT+AGG - chr5.3:19070953-19070972 MS.gene036303:CDS 20.0%
! AATAGCTGAAAATCAGTTAA+AGG + chr5.3:19071372-19071391 None:intergenic 25.0%
! AATTAGACATTAGACATCAA+TGG + chr5.3:19071422-19071441 None:intergenic 25.0%
! ATTAAACAACCATGAATGTT+GGG - chr5.3:19072117-19072136 MS.gene036303:CDS 25.0%
! CTAATTAATGTGCTAAAGTT+TGG - chr5.3:19071436-19071455 MS.gene036303:intron 25.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5.3:19071098-19071117 MS.gene036303:intron 25.0%
! TGTGCAAAAGATTAAATTGA+AGG + chr5.3:19072083-19072102 None:intergenic 25.0%
! TTCTGTAATTAACTGAAGTT+GGG + chr5.3:19072386-19072405 None:intergenic 25.0%
!! ATCTAAGTGTTATTCTGAAA+TGG - chr5.3:19071329-19071348 MS.gene036303:intron 25.0%
!! CTTATAATACTGACACATTT+TGG - chr5.3:19071228-19071247 MS.gene036303:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5.3:19071990-19072009 MS.gene036303:intron 25.0%
!! TATAGATTCGTTCTTTTTCT+GGG - chr5.3:19071264-19071283 MS.gene036303:intron 25.0%
!! TTATAGATTCGTTCTTTTTC+TGG - chr5.3:19071263-19071282 MS.gene036303:intron 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5.3:19072164-19072183 None:intergenic 25.0%
!!! CTAAAGTTTGGTTTTTTTTG+TGG - chr5.3:19071448-19071467 MS.gene036303:intron 25.0%
!!! TCTAAGTGTTATTCTGAAAT+GGG - chr5.3:19071330-19071349 MS.gene036303:intron 25.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5.3:19071029-19071048 None:intergenic 30.0%
AATTGATGAGAATACATTGG+TGG + chr5.3:19071783-19071802 None:intergenic 30.0%
AGGTAATTTACCTTACTTCT+TGG - chr5.3:19071751-19071770 MS.gene036303:intron 30.0%
ATCTAGCACTAGATTCTTAA+TGG - chr5.3:19070858-19070877 MS.gene036303:CDS 30.0%
CATTAAACAACCATGAATGT+TGG - chr5.3:19072116-19072135 MS.gene036303:CDS 30.0%
GTTCTGTAATTAACTGAAGT+TGG + chr5.3:19072387-19072406 None:intergenic 30.0%
TATTCAAATCCCAACATTCA+TGG + chr5.3:19072129-19072148 None:intergenic 30.0%
TCTGTAATTAACTGAAGTTG+GGG + chr5.3:19072385-19072404 None:intergenic 30.0%
TTCATACCATGATGTGATAA+GGG - chr5.3:19071548-19071567 MS.gene036303:CDS 30.0%
TTGTATGGTTTGAACAGATT+AGG - chr5.3:19071520-19071539 MS.gene036303:CDS 30.0%
! ACTATAACAATGTTTTGTGG+CGG - chr5.3:19071881-19071900 MS.gene036303:intron 30.0%
! TGCACTATAACAATGTTTTG+TGG - chr5.3:19071878-19071897 MS.gene036303:intron 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5.3:19072263-19072282 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5.3:19072338-19072357 None:intergenic 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5.3:19072029-19072048 MS.gene036303:intron 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5.3:19072028-19072047 MS.gene036303:intron 30.0%
AAGGAGACAATTAACAGCAA+TGG - chr5.3:19072269-19072288 MS.gene036303:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5.3:19072223-19072242 MS.gene036303:CDS 35.0%
CATCTGTTATCATCATCATC+AGG + chr5.3:19070990-19071009 None:intergenic 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5.3:19072250-19072269 MS.gene036303:CDS 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5.3:19071614-19071633 MS.gene036303:CDS 35.0%
CTGAACAAATCGCTATTGTT+CGG - chr5.3:19071818-19071837 MS.gene036303:intron 35.0%
CTGTAATTAACTGAAGTTGG+GGG + chr5.3:19072384-19072403 None:intergenic 35.0%
CTTCATACCATGATGTGATA+AGG - chr5.3:19071547-19071566 MS.gene036303:CDS 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5.3:19071163-19071182 None:intergenic 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5.3:19072222-19072241 MS.gene036303:CDS 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5.3:19070817-19070836 MS.gene036303:CDS 35.0%
GTGGAAAAAACCAAGAAGTA+AGG + chr5.3:19071764-19071783 None:intergenic 35.0%
TATGGTTTGAACAGATTAGG+AGG - chr5.3:19071523-19071542 MS.gene036303:CDS 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5.3:19072221-19072240 MS.gene036303:CDS 35.0%
TGAGCTATAACAATGTTGTG+TGG + chr5.3:19071927-19071946 None:intergenic 35.0%
TGGGTTAAAATGAGTTGTTG+AGG - chr5.3:19072010-19072029 MS.gene036303:intron 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5.3:19071017-19071036 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5.3:19070988-19071007 MS.gene036303:CDS 35.0%
!! TTGATTTTTGATTAGGGTGC+TGG - chr5.3:19070960-19070979 MS.gene036303:CDS 35.0%
AACAATGGTTTCAACCATGG+TGG + chr5.3:19071014-19071033 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5.3:19070827-19070846 MS.gene036303:CDS 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5.3:19070831-19070850 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5.3:19072402-19072421 MS.gene036303:intron 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5.3:19072057-19072076 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5.3:19071557-19071576 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5.3:19071613-19071632 MS.gene036303:CDS 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5.3:19071309-19071328 None:intergenic 40.0%
CTCAGCTATAGTGAGAACAT+TGG - chr5.3:19071943-19071962 MS.gene036303:intron 40.0%
GCTATAACAATGTTGTGTGG+CGG + chr5.3:19071924-19071943 None:intergenic 40.0%
GGGTTGTGTTCTTGAATGAA+AGG - chr5.3:19071634-19071653 MS.gene036303:CDS 40.0%
TAATTAACTGAAGTTGGGGG+TGG + chr5.3:19072381-19072400 None:intergenic 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5.3:19072412-19072431 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5.3:19070811-19070830 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5.3:19071616-19071635 None:intergenic 40.0%
!! GAATGAGATTCAGAAGCACT+TGG - chr5.3:19071572-19071591 MS.gene036303:CDS 40.0%
!!! ACTGACACATTTTGGCTCAT+GGG - chr5.3:19071236-19071255 MS.gene036303:intron 40.0%
!!! ATTTTTGATTAGGGTGCTGG+AGG - chr5.3:19070963-19070982 MS.gene036303:CDS 40.0%
!!! TACTGACACATTTTGGCTCA+TGG - chr5.3:19071235-19071254 MS.gene036303:intron 40.0%
AATACCACATAGAGCCCCAT+TGG - chr5.3:19072425-19072444 MS.gene036303:CDS 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5.3:19071716-19071735 None:intergenic 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5.3:19072284-19072303 MS.gene036303:intron 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5.3:19072426-19072445 MS.gene036303:CDS 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5.3:19070997-19071016 MS.gene036303:CDS 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5.3:19071151-19071170 MS.gene036303:intron 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5.3:19072401-19072420 MS.gene036303:intron 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5.3:19071151-19071170 None:intergenic 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5.3:19071160-19071179 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5.3:19071709-19071728 MS.gene036303:intron 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5.3:19071731-19071750 MS.gene036303:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5.3:19071646-19071665 MS.gene036303:CDS 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5.3:19071731-19071750 None:intergenic 45.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5.3:19071727-19071746 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5.3:19072443-19072462 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5.3:19071125-19071144 None:intergenic 50.0%
GTGTTTGTGACACCTTTCCC+TGG + chr5.3:19071672-19071691 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5.3:19072427-19072446 MS.gene036303:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5.3:19072442-19072461 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5.3:19071723-19071742 MS.gene036303:intron 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5.3:19072444-19072463 None:intergenic 50.0%
!! CAGAAGCACTTGGACATTGC+TGG - chr5.3:19071582-19071601 MS.gene036303:CDS 50.0%
AAAGGCCTCAACCAAGGCCA+GGG - chr5.3:19071652-19071671 MS.gene036303:CDS 55.0%
ACCACATAGAGCCCCATTGG+GGG - chr5.3:19072428-19072447 MS.gene036303:CDS 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5.3:19072372-19072391 None:intergenic 55.0%
CCACATAGAGCCCCATTGGG+GGG - chr5.3:19072429-19072448 MS.gene036303:CDS 60.0%
CCTCAACCAAGGCCAGGGAA+AGG - chr5.3:19071657-19071676 MS.gene036303:CDS 60.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5.3:19071651-19071670 MS.gene036303:CDS 60.0%
GTGACACCTTTCCCTGGCCT+TGG + chr5.3:19071666-19071685 None:intergenic 60.0%
!! CCTTTCCCTGGCCTTGGTTG+AGG + chr5.3:19071660-19071679 None:intergenic 60.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5.3:19072432-19072451 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 19070783 19072470 19070783 ID=MS.gene036303
chr5.3 mRNA 19070783 19072470 19070783 ID=MS.gene036303.t1;Parent=MS.gene036303
chr5.3 exon 19072405 19072470 19072405 ID=MS.gene036303.t1.exon1;Parent=MS.gene036303.t1
chr5.3 CDS 19072405 19072470 19072405 ID=cds.MS.gene036303.t1;Parent=MS.gene036303.t1
chr5.3 exon 19072081 19072278 19072081 ID=MS.gene036303.t1.exon2;Parent=MS.gene036303.t1
chr5.3 CDS 19072081 19072278 19072081 ID=cds.MS.gene036303.t1;Parent=MS.gene036303.t1
chr5.3 exon 19071501 19071716 19071501 ID=MS.gene036303.t1.exon3;Parent=MS.gene036303.t1
chr5.3 CDS 19071501 19071716 19071501 ID=cds.MS.gene036303.t1;Parent=MS.gene036303.t1
chr5.3 exon 19070783 19071016 19070783 ID=MS.gene036303.t1.exon4;Parent=MS.gene036303.t1
chr5.3 CDS 19070783 19071016 19070783 ID=cds.MS.gene036303.t1;Parent=MS.gene036303.t1
Gene Sequence

>MS.gene036303

ATGGCAATTGAAAATCAAGAAAACACCAGTGTCAGAGAAATCAAACCAAAGAACAGGAGAATCATGGTATGCACAATCTAGCACTAGATTCTTAATGGTTTTTTTTTGTTTTTTTAATATTAATGTGTTCTGTTTTTTTCTACATTGTATTATGTTCTGTTTTTATTGATTTTTGGTTTGATTTTTGATTAGGGTGCTGGAGGACCTGATGATGATGATAACAGATGGCCACCATGGTTGAAACCATTGTTGAAAGAAGCTTTCTTTGTTCAATGCAAGATACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTTGCTTACCACAAAGACCACCGTTACATTCAGGTTTGTCTTCATTGTTCAATCAATTCATCAAAAAAATTTACTTTTTGTAGAAAAACTTATAATACTGACACATTTTGGCTCATGGGCTACTTATAGATTCGTTCTTTTTCTGGGTTAATTTCAGTTAAAAGTTCCACTTTTGTTTTCTGTGCTGAGATCTAAGTGTTATTCTGAAATGGGTTTATAAAAAATGTGACCTTTAACTGATTTTCAGCTATTTTTTCAATGTGTGTGAATAATGTTTAACCATTGATGTCTAATGTCTAATTAATGTGCTAAAGTTTGGTTTTTTTTGTGGTTTAACCATTGATGTCTAATGTTTAATTAATGTGCTAAAGTTTGTTTTTTTGTATGGTTTGAACAGATTAGGAGGTCTTCATACCATGATGTGATAAGGGTGAATGAGATTCAGAAGCACTTGGACATTGCTGGTGTTCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAAAGGCCTCAACCAAGGCCAGGGAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTTGATTCCTTCCGGTTCTGTTCTCTTGGTTGCAAGGTAATTTACCTTACTTCTTGGTTTTTTCCACCAATGTATTCTCATCAATTATTTTGTAGCAGAATCTGAACAAATCGCTATTGTTCGGCTATACACACTATAGCGCAGCTATAGCGAGCTATAGCTGCACTATAACAATGTTTTGTGGCGGAATTTGAACAAACTACTCCGCCACACAACATTGTTATAGCTCAGCTATAGTGAGAACATTGGATGATGTATTTGCTTTCTTTTCAAGCTAGTAAAGAAACTTTTTATGGGTTAAAATGAGTTGTTGAGGTTGACTTTTTCATAATGGGTACCATTTGATTCACGAGACTCTTGTATCCTTCAATTTAATCTTTTGCACAAATTTCTTCAAAGCATTAAACAACCATGAATGTTGGGATTTGAATATTGACTTATAATCCATCTTTGTCAAAATCATAACTATTATGTGTTCAACAAGTTTATGTTAATCAATCAATGTGAATGTGAATTGCAGATTGTGGGGACATCTAAGAACTTCCAGAAGAAAAGGAGACAATTAACAGCAATGGCATCAGATTCTGAGGAGTCATACAGTAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTTACACCATCTACACCACCCCCAACTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGGACTTGATCTAGATTATTAG
Protein sequence

>MS.gene036303.t1

MAIENQENTSVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKEAFFVQCKIHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRYIQIRRSSYHDVIRVNEIQKHLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKRRQLTAMASDSEESYSSNNIHSRQKKIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLDLDY