Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036641.t1 | XP_013466739.1 | 40.8 | 370 | 153 | 8 | 1 | 367 | 1 | 307 | 2.20E-49 | 206.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036641.t1 | A0A072VRN1 | 40.8 | 370 | 153 | 8 | 1 | 367 | 1 | 307 | 1.6e-49 | 206.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene036641.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036641.t1 | MTR_1g034500 | 51.622 | 370 | 113 | 7 | 1 | 367 | 1 | 307 | 1.93e-110 | 325 |
| MS.gene036641.t1 | MTR_2g045670 | 40.761 | 368 | 111 | 8 | 1 | 367 | 20 | 281 | 7.09e-70 | 221 |
| MS.gene036641.t1 | MTR_2g045700 | 41.192 | 369 | 117 | 8 | 1 | 367 | 1 | 271 | 6.21e-65 | 207 |
| MS.gene036641.t1 | MTR_2g045630 | 45.221 | 272 | 112 | 7 | 96 | 366 | 42 | 277 | 2.42e-53 | 178 |
| MS.gene036641.t1 | MTR_8g077950 | 38.636 | 88 | 52 | 1 | 276 | 361 | 252 | 339 | 7.29e-13 | 69.3 |
| MS.gene036641.t1 | MTR_8g077950 | 38.636 | 88 | 52 | 1 | 276 | 361 | 250 | 337 | 8.12e-13 | 68.9 |
| MS.gene036641.t1 | MTR_8g077950 | 38.636 | 88 | 52 | 1 | 276 | 361 | 192 | 279 | 2.21e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 67 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACAGGTTGTGAGTTTC+TGG | 0.129427 | 8.4:-13640893 | None:intergenic |
| CTCAGCTAGTAGAGATTTAT+TGG | 0.150152 | 8.4:-13640539 | None:intergenic |
| TCCCCAGTTATTAATCTTAC+AGG | 0.249858 | 8.4:-13640907 | None:intergenic |
| GTAAATAATTGGTTGGAATC+TGG | 0.251335 | 8.4:-13640871 | None:intergenic |
| GAGAACAAGGATTTATCTTT+TGG | 0.256634 | 8.4:+13642112 | MS.gene036641:CDS |
| GTGAGTTTCTGGTAAATAAT+TGG | 0.270018 | 8.4:-13640882 | None:intergenic |
| CAAAGAAATTGTTGTAATAC+TGG | 0.291279 | 8.4:-13641005 | None:intergenic |
| ACTGGGGAATCAAGTGAATA+TGG | 0.297191 | 8.4:+13640922 | MS.gene036641:CDS |
| GAGAACAAGGTTAAGGAAAA+AGG | 0.303213 | 8.4:+13643681 | MS.gene036641:CDS |
| TGCAGGTGGATGATTATAAT+AGG | 0.311712 | 8.4:-13640259 | None:intergenic |
| CAACCTGTAAGATTAATAAC+TGG | 0.342383 | 8.4:+13640904 | MS.gene036641:CDS |
| TGATGCTCAACTAAAATATA+TGG | 0.343775 | 8.4:+13642395 | MS.gene036641:CDS |
| TGCAATTGCTTTCTCAGAAA+TGG | 0.357172 | 8.4:+13640822 | MS.gene036641:CDS |
| GGATGATTATAATAGGGATT+TGG | 0.374399 | 8.4:-13640252 | None:intergenic |
| CTTGGCTGATTCAGAGTTTG+AGG | 0.379924 | 8.4:+13642337 | MS.gene036641:CDS |
| TGTGGCAGCATAGGATTGTT+TGG | 0.381160 | 8.4:-13639893 | None:intergenic |
| ATCTGTGCTGAGTCAAACTT+TGG | 0.386345 | 8.4:+13641038 | MS.gene036641:CDS |
| TAAATAATTGGTTGGAATCT+GGG | 0.388774 | 8.4:-13640870 | None:intergenic |
| TGACGCTCGACTAAATAATA+TGG | 0.389843 | 8.4:+13641086 | MS.gene036641:CDS |
| AAGTTATTCTGAGGCATGTC+TGG | 0.390063 | 8.4:+13644691 | MS.gene036641:CDS |
| GAAGAGCTAATTAAGGAGTA+TGG | 0.396074 | 8.4:+13645167 | MS.gene036641:CDS |
| CAATCCTATGCTGCCACATT+GGG | 0.402800 | 8.4:+13639898 | MS.gene036641:CDS |
| CAGATATCTAAGATGAATGT+TGG | 0.419613 | 8.4:+13642082 | MS.gene036641:CDS |
| AGATATCTAAGATGAATGTT+GGG | 0.419993 | 8.4:+13642083 | MS.gene036641:CDS |
| TCAGTACATGTGGCAAAATC+AGG | 0.421341 | 8.4:+13640362 | MS.gene036641:CDS |
| GATTTATTGGAGAGCTTCAC+AGG | 0.424141 | 8.4:-13640526 | None:intergenic |
| GATATCTGCTTCTTACATAT+AGG | 0.425971 | 8.4:-13642067 | None:intergenic |
| ACATTGGGCTTCATCTATGC+AGG | 0.450861 | 8.4:+13639913 | MS.gene036641:CDS |
| GGAACAGGAAGAGCTAATTA+AGG | 0.452723 | 8.4:+13645160 | MS.gene036641:intron |
| CAGCTAAGAGAACAAGGTTA+AGG | 0.453072 | 8.4:+13643674 | MS.gene036641:CDS |
| AAAGAAGAATCCGATCCATC+TGG | 0.459016 | 8.4:+13639733 | MS.gene036641:CDS |
| TCTGTGCTGAGTCAAACTTT+GGG | 0.467374 | 8.4:+13641039 | MS.gene036641:CDS |
| GCAGGTGGATGATTATAATA+GGG | 0.469270 | 8.4:-13640258 | None:intergenic |
| AAAGTTTGACTCAGCACAGA+TGG | 0.498013 | 8.4:-13641036 | None:intergenic |
| GTTTCTGGTAAATAATTGGT+TGG | 0.499066 | 8.4:-13640878 | None:intergenic |
| TTGAATCATCAGTATGCAGC+TGG | 0.509107 | 8.4:+13640324 | MS.gene036641:CDS |
| CTGAGTCAAACTTTGGGGAC+AGG | 0.511343 | 8.4:+13641045 | MS.gene036641:CDS |
| CTTTCTCAGAAATGGTAAGC+AGG | 0.515920 | 8.4:+13640830 | MS.gene036641:CDS |
| TGAGGTACCACAAAATAGTA+AGG | 0.518570 | 8.4:-13639760 | None:intergenic |
| ACAATCCTATGCTGCCACAT+TGG | 0.521704 | 8.4:+13639897 | MS.gene036641:CDS |
| AAACTCTGAATCAGCCAAGA+TGG | 0.521783 | 8.4:-13642333 | None:intergenic |
| GAAGCCCAATGTGGCAGCAT+AGG | 0.526989 | 8.4:-13639902 | None:intergenic |
| TATAATCATCCACCTGCAGC+TGG | 0.532701 | 8.4:+13640264 | MS.gene036641:CDS |
| CAGTTACAATGTCAAGCAGC+AGG | 0.542255 | 8.4:-13645224 | None:intergenic |
| AACCTGTAAGATTAATAACT+GGG | 0.551341 | 8.4:+13640905 | MS.gene036641:CDS |
| AAATAGTAAGGTCTTCCAGA+TGG | 0.566947 | 8.4:-13639748 | None:intergenic |
| AACTTTGGGGACAGGCGTCA+AGG | 0.567206 | 8.4:+13641053 | MS.gene036641:CDS |
| GTTAAAATGATGAACCTCGA+TGG | 0.568844 | 8.4:-13644735 | None:intergenic |
| CTCATGTAAGAACCAGCTGC+AGG | 0.577655 | 8.4:-13640276 | None:intergenic |
| TGTTGGGGATGGTGAGAACA+AGG | 0.580631 | 8.4:+13642099 | MS.gene036641:CDS |
| ATAGGGATTTGGAGTAAACT+CGG | 0.582242 | 8.4:-13640241 | None:intergenic |
| GTAAGGTCTTCCAGATGGAT+CGG | 0.588408 | 8.4:-13639743 | None:intergenic |
| CTGTGCTGAGTCAAACTTTG+GGG | 0.590960 | 8.4:+13641040 | MS.gene036641:CDS |
| GAAATCTAAGATGACTGTTG+AGG | 0.593683 | 8.4:+13642147 | MS.gene036641:CDS |
| TAGGGATTTGGAGTAAACTC+GGG | 0.602326 | 8.4:-13640240 | None:intergenic |
| CATGATTCACTGACATCTTG+AGG | 0.602539 | 8.4:-13639778 | None:intergenic |
| CAATAAATCTCTACTAGCTG+AGG | 0.606627 | 8.4:+13640540 | MS.gene036641:CDS |
| GGGAATCAGCTAAGAGAACA+AGG | 0.611347 | 8.4:+13643668 | MS.gene036641:CDS |
| GAGTTTGAGGACAGTCGTCA+AGG | 0.611746 | 8.4:+13642350 | MS.gene036641:CDS |
| GATATCTAAGATGAATGTTG+GGG | 0.621950 | 8.4:+13642084 | MS.gene036641:CDS |
| ACTTGAATCATCAGTACATG+TGG | 0.630018 | 8.4:+13640352 | MS.gene036641:CDS |
| ATGTAAGAACCAGCTGCAGG+TGG | 0.634873 | 8.4:-13640273 | None:intergenic |
| TCTAAGATGACTGTTGAGGA+TGG | 0.650064 | 8.4:+13642151 | MS.gene036641:CDS |
| TCTAAGATGAATGTTGGGGA+TGG | 0.657589 | 8.4:+13642088 | MS.gene036641:CDS |
| ACCTGTAAGATTAATAACTG+GGG | 0.682506 | 8.4:+13640906 | MS.gene036641:CDS |
| TGCATAGATGAAGCCCAATG+TGG | 0.703015 | 8.4:-13639911 | None:intergenic |
| TGATGAAAACGATTCCATCG+AGG | 0.749293 | 8.4:+13644721 | MS.gene036641:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAGAAAATTAGAATA+AGG | - | chr8.4:13643908-13643927 | None:intergenic | 10.0% |
| !! | CTAAAAGATATATTAAAAAA+TGG | - | chr8.4:13643857-13643876 | None:intergenic | 10.0% |
| !! | GATATAAAATTGAAAAAATA+AGG | - | chr8.4:13644764-13644783 | None:intergenic | 10.0% |
| !! | TATAAAATTGAAAAAATAAG+GGG | - | chr8.4:13644762-13644781 | None:intergenic | 10.0% |
| !! | TATTATAACTAACAAAATTA+TGG | - | chr8.4:13643323-13643342 | None:intergenic | 10.0% |
| !!! | ACTCATTTTAAATTTTAATT+AGG | + | chr8.4:13640206-13640225 | MS.gene036641:intron | 10.0% |
| !!! | TGAAAAAAAAAAAAACTTTT+GGG | - | chr8.4:13643882-13643901 | None:intergenic | 10.0% |
| !!! | TTGAAAAAAAAAAAAACTTT+TGG | - | chr8.4:13643883-13643902 | None:intergenic | 10.0% |
| !! | AATGAAATAAACTAAAAACT+AGG | + | chr8.4:13644886-13644905 | MS.gene036641:intron | 15.0% |
| !! | AATTAAATGCTAATTTAAGA+TGG | - | chr8.4:13642576-13642595 | None:intergenic | 15.0% |
| !! | ATATATTCATTGAAATATCT+AGG | - | chr8.4:13640570-13640589 | None:intergenic | 15.0% |
| !!! | AATCATTAATTTTTCATTGA+TGG | + | chr8.4:13641302-13641321 | MS.gene036641:intron | 15.0% |
| !!! | ATTAAATGCTAATTTAAGAT+GGG | - | chr8.4:13642575-13642594 | None:intergenic | 15.0% |
| !!! | GAAAAAAAAAAAAACTTTTG+GGG | - | chr8.4:13643881-13643900 | None:intergenic | 15.0% |
| !!! | TTAGATATTCTTAATTTTGT+TGG | + | chr8.4:13643256-13643275 | MS.gene036641:intron | 15.0% |
| !!! | TTTTCTAATCATAATTTCTA+TGG | + | chr8.4:13640613-13640632 | MS.gene036641:intron | 15.0% |
| !! | AAAAAGAAATGAAAACAGTT+AGG | + | chr8.4:13644927-13644946 | MS.gene036641:intron | 20.0% |
| !! | AAAATTATGGCTAGAATTAT+AGG | - | chr8.4:13643310-13643329 | None:intergenic | 20.0% |
| !! | AAACTTATACACAATTCATT+AGG | - | chr8.4:13640760-13640779 | None:intergenic | 20.0% |
| !! | AAATTATGGCTAGAATTATA+GGG | - | chr8.4:13643309-13643328 | None:intergenic | 20.0% |
| !! | AAGATTAATTCTTAACTATC+TGG | + | chr8.4:13643558-13643577 | MS.gene036641:intron | 20.0% |
| !! | AGGAAATTTCATATTTCTTT+AGG | + | chr8.4:13640666-13640685 | MS.gene036641:intron | 20.0% |
| !! | ATCAATTTATTCTTCATTAC+AGG | + | chr8.4:13641984-13642003 | MS.gene036641:intron | 20.0% |
| !! | ATTCAACTAAATTACTTGTT+TGG | + | chr8.4:13644788-13644807 | MS.gene036641:intron | 20.0% |
| !! | ATTCATTGTTAAAATGTAGT+AGG | + | chr8.4:13641600-13641619 | MS.gene036641:intron | 20.0% |
| !! | GATTATGATTATACATGTTA+GGG | + | chr8.4:13644312-13644331 | MS.gene036641:intron | 20.0% |
| !! | GCTAAAATGACATATAATTT+GGG | + | chr8.4:13641359-13641378 | MS.gene036641:intron | 20.0% |
| !! | TAATAAGTGCTTAAAATGTT+TGG | - | chr8.4:13642958-13642977 | None:intergenic | 20.0% |
| !! | TATAGTTAGTATACATTTAG+AGG | + | chr8.4:13640646-13640665 | MS.gene036641:intron | 20.0% |
| !! | TATGATTGTTGTATATTCAT+CGG | + | chr8.4:13644398-13644417 | MS.gene036641:intron | 20.0% |
| !! | TCTTAGATATTGGAATTAAT+GGG | + | chr8.4:13641883-13641902 | MS.gene036641:intron | 20.0% |
| !! | TGATTATGATTATACATGTT+AGG | + | chr8.4:13644311-13644330 | MS.gene036641:intron | 20.0% |
| !! | TGCTAAAATGACATATAATT+TGG | + | chr8.4:13641358-13641377 | MS.gene036641:intron | 20.0% |
| !!! | AAACATTTTAAGCACTTATT+AGG | + | chr8.4:13642957-13642976 | MS.gene036641:intron | 20.0% |
| !!! | AACTTTTTAGTTGTTTTGTT+AGG | - | chr8.4:13644676-13644695 | None:intergenic | 20.0% |
| !!! | ATACCAATATTTATGCATTT+TGG | + | chr8.4:13640790-13640809 | MS.gene036641:intron | 20.0% |
| !!! | GTATCTAAGATATATAAAGT+AGG | - | chr8.4:13642676-13642695 | None:intergenic | 20.0% |
| !!! | GTTTGAAAAGGTTTTATTTA+TGG | + | chr8.4:13642449-13642468 | MS.gene036641:intron | 20.0% |
| !!! | TATATTGAGCTTTAAATTGT+TGG | + | chr8.4:13643214-13643233 | MS.gene036641:intron | 20.0% |
| !!! | TTTTCACATTCTTTGTTTTT+CGG | + | chr8.4:13640459-13640478 | MS.gene036641:intron | 20.0% |
| ! | AAAACTGTAAAAAAAAGTCG+TGG | + | chr8.4:13643823-13643842 | MS.gene036641:intron | 25.0% |
| ! | AAACTGTAAAAAAAAGTCGT+GGG | + | chr8.4:13643824-13643843 | MS.gene036641:intron | 25.0% |
| ! | AAAGAAAAAGACAATCAAAC+AGG | + | chr8.4:13643647-13643666 | MS.gene036641:CDS | 25.0% |
| ! | AAAGATACTAATTGGCAATT+TGG | - | chr8.4:13644435-13644454 | None:intergenic | 25.0% |
| ! | AACCTGTAAGATTAATAACT+GGG | + | chr8.4:13640905-13640924 | MS.gene036641:CDS | 25.0% |
| ! | AAGAAAAAGACAATCAAACA+GGG | + | chr8.4:13643648-13643667 | MS.gene036641:CDS | 25.0% |
| ! | AAGAAATGGGTAGTTTATTA+AGG | + | chr8.4:13641950-13641969 | MS.gene036641:intron | 25.0% |
| ! | AATATCTATGATTTCGACAA+TGG | + | chr8.4:13643788-13643807 | MS.gene036641:intron | 25.0% |
| ! | ACAACTAAAAAGTTATTCTG+AGG | + | chr8.4:13644682-13644701 | MS.gene036641:CDS | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr8.4:13644286-13644305 | None:intergenic | 25.0% |
| ! | ATAGAGAAATAAACAGCTAA+TGG | + | chr8.4:13641265-13641284 | MS.gene036641:intron | 25.0% |
| ! | ATATCTAACAAGATTTGAGA+TGG | - | chr8.4:13643244-13643263 | None:intergenic | 25.0% |
| ! | ATGAAAGGCTTATAAATGAT+AGG | - | chr8.4:13643446-13643465 | None:intergenic | 25.0% |
| ! | ATGAGACAATGTATCTTTAA+GGG | - | chr8.4:13642709-13642728 | None:intergenic | 25.0% |
| ! | ATTCACTGTTGAAATATAGT+AGG | + | chr8.4:13642611-13642630 | MS.gene036641:intron | 25.0% |
| ! | ATTTCATATTTCTTTAGGTG+CGG | + | chr8.4:13640671-13640690 | MS.gene036641:intron | 25.0% |
| ! | CAAAGAAATTGTTGTAATAC+TGG | - | chr8.4:13641008-13641027 | None:intergenic | 25.0% |
| ! | CTCTTAGATATTGGAATTAA+TGG | + | chr8.4:13641882-13641901 | MS.gene036641:intron | 25.0% |
| ! | GAAGTGTAATTAATGTTGTA+TGG | + | chr8.4:13641161-13641180 | MS.gene036641:intron | 25.0% |
| ! | GATACATATTTAAATCCCTT+AGG | + | chr8.4:13641680-13641699 | MS.gene036641:intron | 25.0% |
| ! | GGTAATGATGTACATATTTA+TGG | + | chr8.4:13640383-13640402 | MS.gene036641:intron | 25.0% |
| ! | GGTGTAAAATGACATAATTT+GGG | + | chr8.4:13641323-13641342 | MS.gene036641:intron | 25.0% |
| ! | GTTTCCTTATTATGAACTTA+TGG | + | chr8.4:13644241-13644260 | MS.gene036641:intron | 25.0% |
| ! | TAAAATTTGAATGCTCAGAA+AGG | + | chr8.4:13642231-13642250 | MS.gene036641:intron | 25.0% |
| ! | TAAATAATTGGTTGGAATCT+GGG | - | chr8.4:13640873-13640892 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr8.4:13644287-13644306 | None:intergenic | 25.0% |
| ! | TAGAATGTTGGATTGTAAAA+TGG | - | chr8.4:13643483-13643502 | None:intergenic | 25.0% |
| ! | TATGAGACAATGTATCTTTA+AGG | - | chr8.4:13642710-13642729 | None:intergenic | 25.0% |
| ! | TATGTATCGAAGATACATAA+AGG | - | chr8.4:13641668-13641687 | None:intergenic | 25.0% |
| ! | TCAAAAAAGTAAGTTTGCAT+GGG | - | chr8.4:13642517-13642536 | None:intergenic | 25.0% |
| ! | TGACCAAAATGCATAAATAT+TGG | - | chr8.4:13640796-13640815 | None:intergenic | 25.0% |
| ! | TGATGCTCAACTAAAATATA+TGG | + | chr8.4:13642395-13642414 | MS.gene036641:CDS | 25.0% |
| ! | TGGTAATCAAAGATACTAAT+TGG | - | chr8.4:13644443-13644462 | None:intergenic | 25.0% |
| ! | TGGTGTAAAATGACATAATT+TGG | + | chr8.4:13641322-13641341 | MS.gene036641:intron | 25.0% |
| ! | TTCAAAAAAGTAAGTTTGCA+TGG | - | chr8.4:13642518-13642537 | None:intergenic | 25.0% |
| !! | AATATATATAGTGTGTCGAT+GGG | - | chr8.4:13643200-13643219 | None:intergenic | 25.0% |
| !! | AATTTTCGTGAAATTGTCAA+AGG | - | chr8.4:13641139-13641158 | None:intergenic | 25.0% |
| !! | AGATATCTAAGATGAATGTT+GGG | + | chr8.4:13642083-13642102 | MS.gene036641:CDS | 25.0% |
| !! | AGTTATAATATGTTTTCGTG+TGG | + | chr8.4:13643333-13643352 | MS.gene036641:intron | 25.0% |
| !! | ATGTCATCTTTTCTTTCTTT+AGG | - | chr8.4:13641633-13641652 | None:intergenic | 25.0% |
| !! | ATTTTCGTGAAATTGTCAAA+GGG | - | chr8.4:13641138-13641157 | None:intergenic | 25.0% |
| !! | CAATATTTTCTGCAATTATG+AGG | - | chr8.4:13643767-13643786 | None:intergenic | 25.0% |
| !! | CAATTAGTTTAGTCAAAGAT+AGG | + | chr8.4:13643979-13643998 | MS.gene036641:intron | 25.0% |
| !! | GGAGTACTATTAAATGTTAT+AGG | + | chr8.4:13641387-13641406 | MS.gene036641:intron | 25.0% |
| !! | TTATTCAAAGCTTTTGATGT+TGG | + | chr8.4:13645047-13645066 | MS.gene036641:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr8.4:13644286-13644305 | MS.gene036641:intron | 25.0% |
| !! | TTTTCATAGCATGTTTGAAA+AGG | + | chr8.4:13642437-13642456 | MS.gene036641:intron | 25.0% |
| !! | TTTTCTACGGCAATTATAAA+TGG | - | chr8.4:13641725-13641744 | None:intergenic | 25.0% |
| !! | TTTTTGTAGCATGTTTGAAA+AGG | + | chr8.4:13641410-13641429 | MS.gene036641:intron | 25.0% |
| !!! | AACCCTTGTAATTTTTTCTA+CGG | - | chr8.4:13641738-13641757 | None:intergenic | 25.0% |
| !!! | AAGAAACAATGTTTTTAGCT+TGG | + | chr8.4:13644091-13644110 | MS.gene036641:intron | 25.0% |
| !!! | AAGTTTTATATGTTTCCATG+AGG | - | chr8.4:13644540-13644559 | None:intergenic | 25.0% |
| !!! | AATATTTATGCATTTTGGTC+AGG | + | chr8.4:13640795-13640814 | MS.gene036641:intron | 25.0% |
| !!! | GTTTGAAAAGGTTTTATTTG+TGG | + | chr8.4:13641422-13641441 | MS.gene036641:intron | 25.0% |
| AAAATTTGCAACTACCACAT+TGG | - | chr8.4:13644463-13644482 | None:intergenic | 30.0% | |
| AAAGAATGTGAAAATGAAGC+AGG | - | chr8.4:13640453-13640472 | None:intergenic | 30.0% | |
| AACTCAACCTCATAAGAAAT+GGG | + | chr8.4:13641937-13641956 | MS.gene036641:intron | 30.0% | |
| AAGAGATGTAAACAAAGTCA+AGG | - | chr8.4:13644499-13644518 | None:intergenic | 30.0% | |
| AATGTTGGATTGTAAAATGG+TGG | - | chr8.4:13643480-13643499 | None:intergenic | 30.0% | |
| ACCTGTAAGATTAATAACTG+GGG | + | chr8.4:13640906-13640925 | MS.gene036641:CDS | 30.0% | |
| AGCACCATAAGTTCATAATA+AGG | - | chr8.4:13644248-13644267 | None:intergenic | 30.0% | |
| AGTATCTTTGATTACCAATG+TGG | + | chr8.4:13644446-13644465 | MS.gene036641:intron | 30.0% | |
| ATGAAAACAGTTAGGATGTT+AGG | + | chr8.4:13644935-13644954 | MS.gene036641:intron | 30.0% | |
| ATGAACTGCAATACAAGTTT+CGG | - | chr8.4:13642266-13642285 | None:intergenic | 30.0% | |
| ATGGTACTGTAGAATGTTAT+GGG | + | chr8.4:13642414-13642433 | MS.gene036641:intron | 30.0% | |
| CAACAAACTTTCCCTTTATT+TGG | + | chr8.4:13644272-13644291 | MS.gene036641:intron | 30.0% | |
| CAACCTGTAAGATTAATAAC+TGG | + | chr8.4:13640904-13640923 | MS.gene036641:CDS | 30.0% | |
| CAATATATATAGTGTGTCGA+TGG | - | chr8.4:13643201-13643220 | None:intergenic | 30.0% | |
| CATATCTTAGTTTCCTTCAT+TGG | + | chr8.4:13644157-13644176 | MS.gene036641:intron | 30.0% | |
| CGGTAATAATTTGAGAATGT+TGG | + | chr8.4:13643095-13643114 | MS.gene036641:intron | 30.0% | |
| GAAAAGAAATGCAGCTAAAT+AGG | - | chr8.4:13643601-13643620 | None:intergenic | 30.0% | |
| GAATTAATCTTAGCAACCTT+AGG | - | chr8.4:13643549-13643568 | None:intergenic | 30.0% | |
| GATATCTGCTTCTTACATAT+AGG | - | chr8.4:13642070-13642089 | None:intergenic | 30.0% | |
| GGATGATTATAATAGGGATT+TGG | - | chr8.4:13640255-13640274 | None:intergenic | 30.0% | |
| GTAAATAATTGGTTGGAATC+TGG | - | chr8.4:13640874-13640893 | None:intergenic | 30.0% | |
| GTCAAAGGGACATATAATTT+GGG | - | chr8.4:13641124-13641143 | None:intergenic | 30.0% | |
| TAAACTACCCATTTCTTATG+AGG | - | chr8.4:13641947-13641966 | None:intergenic | 30.0% | |
| TAACTCAACCTCATAAGAAA+TGG | + | chr8.4:13641936-13641955 | MS.gene036641:intron | 30.0% | |
| TATGGTACTGTAGAATGTTA+TGG | + | chr8.4:13642413-13642432 | MS.gene036641:intron | 30.0% | |
| TCAAGTTATGTTCTAACACA+AGG | - | chr8.4:13643035-13643054 | None:intergenic | 30.0% | |
| TCTTTGTAGAAAAACCATCT+TGG | + | chr8.4:13642319-13642338 | MS.gene036641:intron | 30.0% | |
| TGCCGTAGAAAAAATTACAA+GGG | + | chr8.4:13641733-13641752 | MS.gene036641:intron | 30.0% | |
| TGCTTTGTATCAATTTGTGA+TGG | + | chr8.4:13639950-13639969 | MS.gene036641:intron | 30.0% | |
| TGTCAAAGGGACATATAATT+TGG | - | chr8.4:13641125-13641144 | None:intergenic | 30.0% | |
| TTCTCAAATTATTACCGAGT+CGG | - | chr8.4:13643092-13643111 | None:intergenic | 30.0% | |
| TTGCCGTAGAAAAAATTACA+AGG | + | chr8.4:13641732-13641751 | MS.gene036641:intron | 30.0% | |
| TTTCATATTTCTTTAGGTGC+GGG | + | chr8.4:13640672-13640691 | MS.gene036641:intron | 30.0% | |
| ! | ACAAGGATTTATCTTTTGGT+TGG | + | chr8.4:13642116-13642135 | MS.gene036641:CDS | 30.0% |
| ! | ATATATATAGTGTGTCGATG+GGG | - | chr8.4:13643199-13643218 | None:intergenic | 30.0% |
| ! | ATGATTGCTTTGTGATTTGT+TGG | + | chr8.4:13640086-13640105 | MS.gene036641:intron | 30.0% |
| ! | CAGATATCTAAGATGAATGT+TGG | + | chr8.4:13642082-13642101 | MS.gene036641:CDS | 30.0% |
| ! | GAGAACAAGGATTTATCTTT+TGG | + | chr8.4:13642112-13642131 | MS.gene036641:CDS | 30.0% |
| ! | GAGAGTAAGGATTTATCTTT+TGG | + | chr8.4:13642175-13642194 | MS.gene036641:intron | 30.0% |
| ! | GATATCTAAGATGAATGTTG+GGG | + | chr8.4:13642084-13642103 | MS.gene036641:CDS | 30.0% |
| ! | GGTCTTATGCTTAAAATCTT+TGG | + | chr8.4:13642005-13642024 | MS.gene036641:intron | 30.0% |
| ! | GTCTAATTTTATCCTTTCTG+TGG | + | chr8.4:13642035-13642054 | MS.gene036641:intron | 30.0% |
| ! | TAATTCTGAGTGTTGTATTG+TGG | + | chr8.4:13645083-13645102 | MS.gene036641:intron | 30.0% |
| !! | GTGAGTTTCTGGTAAATAAT+TGG | - | chr8.4:13640885-13640904 | None:intergenic | 30.0% |
| !! | GTTTCTGGTAAATAATTGGT+TGG | - | chr8.4:13640881-13640900 | None:intergenic | 30.0% |
| AAAACAGTTAGGATGTTAGG+TGG | + | chr8.4:13644938-13644957 | MS.gene036641:intron | 35.0% | |
| AAATAGTAAGGTCTTCCAGA+TGG | - | chr8.4:13639751-13639770 | None:intergenic | 35.0% | |
| AATCTTAGCAACCTTAGGAA+GGG | - | chr8.4:13643544-13643563 | None:intergenic | 35.0% | |
| AATTATAGGGTCTAGGTAGA+TGG | - | chr8.4:13643296-13643315 | None:intergenic | 35.0% | |
| ACTCAAATTAGCAGCAAACT+TGG | - | chr8.4:13645127-13645146 | None:intergenic | 35.0% | |
| ACTTGAATCATCAGTACATG+TGG | + | chr8.4:13640352-13640371 | MS.gene036641:CDS | 35.0% | |
| AGAAAGTAAATCCCTTCCTA+AGG | + | chr8.4:13643530-13643549 | MS.gene036641:intron | 35.0% | |
| AGTTTGTCATAGTTTCCTCA+TGG | + | chr8.4:13644522-13644541 | MS.gene036641:intron | 35.0% | |
| ATGAAACTGATCACCAATGA+AGG | - | chr8.4:13644173-13644192 | None:intergenic | 35.0% | |
| ATGTAGAGACAATGTACCTA+AGG | - | chr8.4:13641699-13641718 | None:intergenic | 35.0% | |
| CAATAAATCTCTACTAGCTG+AGG | + | chr8.4:13640540-13640559 | MS.gene036641:CDS | 35.0% | |
| CACTTTAGACGGATAAAGAT+AGG | + | chr8.4:13644029-13644048 | MS.gene036641:intron | 35.0% | |
| CTAGGTAGATGGTGAAATTA+TGG | - | chr8.4:13643285-13643304 | None:intergenic | 35.0% | |
| CTCAGCTAGTAGAGATTTAT+TGG | - | chr8.4:13640542-13640561 | None:intergenic | 35.0% | |
| CTGCTAATTTGAGTGTGATT+GGG | + | chr8.4:13645133-13645152 | MS.gene036641:intron | 35.0% | |
| GAAGAGCTAATTAAGGAGTA+TGG | + | chr8.4:13645167-13645186 | MS.gene036641:CDS | 35.0% | |
| GACATATCTAGCTAGAATGT+TGG | - | chr8.4:13643495-13643514 | None:intergenic | 35.0% | |
| GAGAACAAGGTTAAGGAAAA+AGG | + | chr8.4:13643681-13643700 | MS.gene036641:CDS | 35.0% | |
| GATGTCAGTGAATCATGTTA+TGG | + | chr8.4:13639784-13639803 | MS.gene036641:intron | 35.0% | |
| GCAGGTGGATGATTATAATA+GGG | - | chr8.4:13640261-13640280 | None:intergenic | 35.0% | |
| GCATAGGTTCTCTTAGATAT+TGG | + | chr8.4:13641873-13641892 | MS.gene036641:intron | 35.0% | |
| GTATCGAAGATACATAAAGG+AGG | - | chr8.4:13641665-13641684 | None:intergenic | 35.0% | |
| GTGGTAGCATTTCATATGAA+AGG | - | chr8.4:13643461-13643480 | None:intergenic | 35.0% | |
| GTTAAAATGATGAACCTCGA+TGG | - | chr8.4:13644738-13644757 | None:intergenic | 35.0% | |
| TAATCTTAGCAACCTTAGGA+AGG | - | chr8.4:13643545-13643564 | None:intergenic | 35.0% | |
| TAGGTACATTGTCTCTACAT+AGG | + | chr8.4:13641699-13641718 | MS.gene036641:intron | 35.0% | |
| TCAGCACCAAAAATTGATGT+TGG | + | chr8.4:13640955-13640974 | MS.gene036641:CDS | 35.0% | |
| TCCCCAGTTATTAATCTTAC+AGG | - | chr8.4:13640910-13640929 | None:intergenic | 35.0% | |
| TGACGCTCGACTAAATAATA+TGG | + | chr8.4:13641086-13641105 | MS.gene036641:CDS | 35.0% | |
| TGCAATTGCTTTCTCAGAAA+TGG | + | chr8.4:13640822-13640841 | MS.gene036641:CDS | 35.0% | |
| TGCAGGTGGATGATTATAAT+AGG | - | chr8.4:13640262-13640281 | None:intergenic | 35.0% | |
| TGTAGAGACAATGTACCTAA+GGG | - | chr8.4:13641698-13641717 | None:intergenic | 35.0% | |
| TGTCTTCTGATCAACTTATC+TGG | - | chr8.4:13644134-13644153 | None:intergenic | 35.0% | |
| TTCAAATACCAGTCTCACAT+TGG | - | chr8.4:13644988-13645007 | None:intergenic | 35.0% | |
| TTCATATTTCTTTAGGTGCG+GGG | + | chr8.4:13640673-13640692 | MS.gene036641:intron | 35.0% | |
| TTTGAGAATGTTGGATACTC+TGG | + | chr8.4:13643104-13643123 | MS.gene036641:intron | 35.0% | |
| ! | AAAAGGTACATACTAGACCA+TGG | + | chr8.4:13643698-13643717 | MS.gene036641:intron | 35.0% |
| ! | AATTTTATCCTTTCTGTGGC+AGG | + | chr8.4:13642039-13642058 | MS.gene036641:intron | 35.0% |
| ! | ATAGGGATTTGGAGTAAACT+CGG | - | chr8.4:13640244-13640263 | None:intergenic | 35.0% |
| ! | ATAGTTGCTTTCTTAGACCA+TGG | + | chr8.4:13640414-13640433 | MS.gene036641:intron | 35.0% |
| ! | ATGACATATAATTTGGGACG+AGG | + | chr8.4:13641365-13641384 | MS.gene036641:intron | 35.0% |
| ! | GAAATCTAAGATGACTGTTG+AGG | + | chr8.4:13642147-13642166 | MS.gene036641:CDS | 35.0% |
| ! | GCATCTCCAACATCAATTTT+TGG | - | chr8.4:13640964-13640983 | None:intergenic | 35.0% |
| ! | GGACTTGAGTCTTTTCAAAT+AGG | + | chr8.4:13643000-13643019 | MS.gene036641:intron | 35.0% |
| ! | TAAAGTGAGAGTATGTGCTA+AGG | - | chr8.4:13641805-13641824 | None:intergenic | 35.0% |
| ! | TGACATATAATTTGGGACGA+GGG | + | chr8.4:13641366-13641385 | MS.gene036641:intron | 35.0% |
| ! | TGAGGTACCACAAAATAGTA+AGG | - | chr8.4:13639763-13639782 | None:intergenic | 35.0% |
| ! | TGGAAGACCTTACTATTTTG+TGG | + | chr8.4:13639753-13639772 | MS.gene036641:CDS | 35.0% |
| ! | TTAGCTGCATTTCTTTTCTC+AGG | + | chr8.4:13643603-13643622 | MS.gene036641:intron | 35.0% |
| !! | GGATTTATCTTTTGGTTGGA+AGG | + | chr8.4:13642120-13642139 | MS.gene036641:CDS | 35.0% |
| !!! | AACATCAATTTTTGGTGCTG+AGG | - | chr8.4:13640956-13640975 | None:intergenic | 35.0% |
| AAACTCTGAATCAGCCAAGA+TGG | - | chr8.4:13642336-13642355 | None:intergenic | 40.0% | |
| AAAGAAGAATCCGATCCATC+TGG | + | chr8.4:13639733-13639752 | MS.gene036641:CDS | 40.0% | |
| AAAGTTTGACTCAGCACAGA+TGG | - | chr8.4:13641039-13641058 | None:intergenic | 40.0% | |
| AATGATCTGACGATCACGAT+TGG | - | chr8.4:13640022-13640041 | None:intergenic | 40.0% | |
| AATTGGCAATTTGGAAAGCC+AGG | - | chr8.4:13644426-13644445 | None:intergenic | 40.0% | |
| ACTATAAGCAGACTGCACAT+AGG | - | chr8.4:13639828-13639847 | None:intergenic | 40.0% | |
| ACTGGGGAATCAAGTGAATA+TGG | + | chr8.4:13640922-13640941 | MS.gene036641:CDS | 40.0% | |
| AGTCTCACATTGGTAAGCAA+TGG | - | chr8.4:13644978-13644997 | None:intergenic | 40.0% | |
| AGTGGGAACATGTTAAAGTG+AGG | - | chr8.4:13642835-13642854 | None:intergenic | 40.0% | |
| ATCTGTGCTGAGTCAAACTT+TGG | + | chr8.4:13641038-13641057 | MS.gene036641:CDS | 40.0% | |
| ATGTAATTCAACCCACTGAG+TGG | + | chr8.4:13644356-13644375 | MS.gene036641:intron | 40.0% | |
| ATTGCTTACCAATGTGAGAC+TGG | + | chr8.4:13644977-13644996 | MS.gene036641:intron | 40.0% | |
| CAGCTAAGAGAACAAGGTTA+AGG | + | chr8.4:13643674-13643693 | MS.gene036641:CDS | 40.0% | |
| CATGATTCACTGACATCTTG+AGG | - | chr8.4:13639781-13639800 | None:intergenic | 40.0% | |
| CTAATTTGAGTGTGATTGGG+TGG | + | chr8.4:13645136-13645155 | MS.gene036641:intron | 40.0% | |
| CTATAAGCAGACTGCACATA+GGG | - | chr8.4:13639827-13639846 | None:intergenic | 40.0% | |
| CTTTCTCAGAAATGGTAAGC+AGG | + | chr8.4:13640830-13640849 | MS.gene036641:CDS | 40.0% | |
| GATTTATTGGAGAGCTTCAC+AGG | - | chr8.4:13640529-13640548 | None:intergenic | 40.0% | |
| GCACTATCTGTAGTCAATGT+GGG | + | chr8.4:13642979-13642998 | MS.gene036641:intron | 40.0% | |
| GCATAGGCTCTCTTAGATAT+AGG | + | chr8.4:13641910-13641929 | MS.gene036641:intron | 40.0% | |
| GCTGCTAATTTGAGTGTGAT+TGG | + | chr8.4:13645132-13645151 | MS.gene036641:intron | 40.0% | |
| GGAACAGGAAGAGCTAATTA+AGG | + | chr8.4:13645160-13645179 | MS.gene036641:intron | 40.0% | |
| GTCTCACATTGGTAAGCAAT+GGG | - | chr8.4:13644977-13644996 | None:intergenic | 40.0% | |
| GTGGGAACATGTTAAAGTGA+GGG | - | chr8.4:13642834-13642853 | None:intergenic | 40.0% | |
| GTTGTATATTCATCGGATCC+TGG | + | chr8.4:13644405-13644424 | MS.gene036641:intron | 40.0% | |
| TCAGTACATGTGGCAAAATC+AGG | + | chr8.4:13640362-13640381 | MS.gene036641:CDS | 40.0% | |
| TCTGTGCTGAGTCAAACTTT+GGG | + | chr8.4:13641039-13641058 | MS.gene036641:CDS | 40.0% | |
| TCTTACAGGTTGTGAGTTTC+TGG | - | chr8.4:13640896-13640915 | None:intergenic | 40.0% | |
| TGATGAAAACGATTCCATCG+AGG | + | chr8.4:13644721-13644740 | MS.gene036641:CDS | 40.0% | |
| TGGCTAGAATTATAGGGTCT+AGG | - | chr8.4:13643303-13643322 | None:intergenic | 40.0% | |
| TTGAATCATCAGTATGCAGC+TGG | + | chr8.4:13640324-13640343 | MS.gene036641:CDS | 40.0% | |
| ! | CAAAAAGGGGTCTTGTACAA+GGG | - | chr8.4:13641835-13641854 | None:intergenic | 40.0% |
| ! | TAGGGATTTGGAGTAAACTC+GGG | - | chr8.4:13640243-13640262 | None:intergenic | 40.0% |
| ! | TCTAAGATGAATGTTGGGGA+TGG | + | chr8.4:13642088-13642107 | MS.gene036641:CDS | 40.0% |
| ! | TCTAAGATGACTGTTGAGGA+TGG | + | chr8.4:13642151-13642170 | MS.gene036641:CDS | 40.0% |
| ! | TTGAAGCATGGGTTATGCAT+AGG | + | chr8.4:13642872-13642891 | MS.gene036641:intron | 40.0% |
| !! | AAGTTATTCTGAGGCATGTC+TGG | + | chr8.4:13644691-13644710 | MS.gene036641:CDS | 40.0% |
| !! | ACTCAGTGGGTTGAATTACA+TGG | - | chr8.4:13644357-13644376 | None:intergenic | 40.0% |
| !! | GGAATTAATGGGCTATGCAT+AGG | + | chr8.4:13641894-13641913 | MS.gene036641:intron | 40.0% |
| !! | GGTAAGCAATGGGTTAACAT+TGG | - | chr8.4:13644967-13644986 | None:intergenic | 40.0% |
| !!! | CAATTTTTGGTGCTGAGGAT+TGG | - | chr8.4:13640951-13640970 | None:intergenic | 40.0% |
| !!! | CATTCTTTGTTTTTCGGTGC+AGG | + | chr8.4:13640465-13640484 | MS.gene036641:intron | 40.0% |
| AACCCATGCTTCAAGCCATA+GGG | - | chr8.4:13642866-13642885 | None:intergenic | 45.0% | |
| ACAATCCTATGCTGCCACAT+TGG | + | chr8.4:13639897-13639916 | MS.gene036641:CDS | 45.0% | |
| ACATTGGGCTTCATCTATGC+AGG | + | chr8.4:13639913-13639932 | MS.gene036641:CDS | 45.0% | |
| ACCCCATTTGTAATCACCGT+GGG | + | chr8.4:13642734-13642753 | MS.gene036641:intron | 45.0% | |
| ACCGTGGGAGAAAAACACAA+GGG | + | chr8.4:13642749-13642768 | MS.gene036641:intron | 45.0% | |
| ACGTTCCTCACCTTATGAGT+CGG | - | chr8.4:13642935-13642954 | None:intergenic | 45.0% | |
| AGGAAAATCCTGCCACAGAA+AGG | - | chr8.4:13642050-13642069 | None:intergenic | 45.0% | |
| ATTTGAGTGTGATTGGGTGG+TGG | + | chr8.4:13645139-13645158 | MS.gene036641:intron | 45.0% | |
| CAATCCTATGCTGCCACATT+GGG | + | chr8.4:13639898-13639917 | MS.gene036641:CDS | 45.0% | |
| CCATGCTTCAAGCCAAAAAG+GGG | - | chr8.4:13641848-13641867 | None:intergenic | 45.0% | |
| CCCATGCTTCAAGCCAAAAA+GGG | - | chr8.4:13641849-13641868 | None:intergenic | 45.0% | |
| CTCCCACGGTGATTACAAAT+GGG | - | chr8.4:13642739-13642758 | None:intergenic | 45.0% | |
| CTGTGCTGAGTCAAACTTTG+GGG | + | chr8.4:13641040-13641059 | MS.gene036641:CDS | 45.0% | |
| GGCACTATCTGTAGTCAATG+TGG | + | chr8.4:13642978-13642997 | MS.gene036641:intron | 45.0% | |
| GGGAATCAGCTAAGAGAACA+AGG | + | chr8.4:13643668-13643687 | MS.gene036641:CDS | 45.0% | |
| GGTTAGCAGTTACTAGAGGA+TGG | + | chr8.4:13640700-13640719 | MS.gene036641:intron | 45.0% | |
| GTAAGGTCTTCCAGATGGAT+CGG | - | chr8.4:13639746-13639765 | None:intergenic | 45.0% | |
| TAACCCATGCTTCAAGCCAT+AGG | - | chr8.4:13642867-13642886 | None:intergenic | 45.0% | |
| TATAATCATCCACCTGCAGC+TGG | + | chr8.4:13640264-13640283 | MS.gene036641:CDS | 45.0% | |
| TCCCACGGTGATTACAAATG+GGG | - | chr8.4:13642738-13642757 | None:intergenic | 45.0% | |
| TCCCACTTATAAGACCCCTA+TGG | + | chr8.4:13642848-13642867 | MS.gene036641:intron | 45.0% | |
| TCTCCCACGGTGATTACAAA+TGG | - | chr8.4:13642740-13642759 | None:intergenic | 45.0% | |
| TCTTCACGTTCTTGCTGCTA+AGG | - | chr8.4:13644614-13644633 | None:intergenic | 45.0% | |
| TGCATAGATGAAGCCCAATG+TGG | - | chr8.4:13639914-13639933 | None:intergenic | 45.0% | |
| TGTGGCAGCATAGGATTGTT+TGG | - | chr8.4:13639896-13639915 | None:intergenic | 45.0% | |
| TGTTGAGGATGGTGAGAGTA+AGG | + | chr8.4:13642162-13642181 | MS.gene036641:intron | 45.0% | |
| ! | ACCCTTGTGTTTTTCTCCCA+CGG | - | chr8.4:13642753-13642772 | None:intergenic | 45.0% |
| ! | ACGATCACGATTGGTTGACA+AGG | - | chr8.4:13640013-13640032 | None:intergenic | 45.0% |
| ! | AGCCATAGGGGTCTTATAAG+TGG | - | chr8.4:13642853-13642872 | None:intergenic | 45.0% |
| ! | CCAAAAAGGGGTCTTGTACA+AGG | - | chr8.4:13641836-13641855 | None:intergenic | 45.0% |
| ! | CCTCATAAGACCGACTCATA+AGG | + | chr8.4:13642922-13642941 | MS.gene036641:intron | 45.0% |
| ! | CCTTATGAGTCGGTCTTATG+AGG | - | chr8.4:13642925-13642944 | None:intergenic | 45.0% |
| ! | CCTTGTACAAGACCCCTTTT+TGG | + | chr8.4:13641833-13641852 | MS.gene036641:intron | 45.0% |
| ! | CTTGGCTGATTCAGAGTTTG+AGG | + | chr8.4:13642337-13642356 | MS.gene036641:CDS | 45.0% |
| ! | GCCATAGGGGTCTTATAAGT+GGG | - | chr8.4:13642852-13642871 | None:intergenic | 45.0% |
| ! | TAAGACCGACTCATAAGGTG+AGG | + | chr8.4:13642927-13642946 | MS.gene036641:intron | 45.0% |
| ! | TTGAAGCATGGGCTATGCAT+AGG | + | chr8.4:13641857-13641876 | MS.gene036641:intron | 45.0% |
| !!! | CCCTTTTTGGCTTGAAGCAT+GGG | + | chr8.4:13641846-13641865 | MS.gene036641:intron | 45.0% |
| !! | ATATAAAATTGAAAAAATAA+GGG | - | chr8.4:13644763-13644782 | None:intergenic | 5.0% |
| AAGTCTGCTCTTCCACTCAG+TGG | - | chr8.4:13644371-13644390 | None:intergenic | 50.0% | |
| ACACCGACACTTCAGACTGA+GGG | - | chr8.4:13643134-13643153 | None:intergenic | 50.0% | |
| ACCCATGCTTCAAGCCATAG+GGG | - | chr8.4:13642865-13642884 | None:intergenic | 50.0% | |
| ACCCCTATGGCTTGAAGCAT+GGG | + | chr8.4:13642861-13642880 | MS.gene036641:intron | 50.0% | |
| AGTCTGCTCTTCCACTCAGT+GGG | - | chr8.4:13644370-13644389 | None:intergenic | 50.0% | |
| ATGTAAGAACCAGCTGCAGG+TGG | - | chr8.4:13640276-13640295 | None:intergenic | 50.0% | |
| ATTTCTTTAGGTGCGGGGCT+GGG | + | chr8.4:13640678-13640697 | MS.gene036641:intron | 50.0% | |
| CACCGTGGGAGAAAAACACA+AGG | + | chr8.4:13642748-13642767 | MS.gene036641:intron | 50.0% | |
| CGTGTGGCAACTGATCTTGT+AGG | + | chr8.4:13643349-13643368 | MS.gene036641:intron | 50.0% | |
| CTCATGTAAGAACCAGCTGC+AGG | - | chr8.4:13640279-13640298 | None:intergenic | 50.0% | |
| GACCCCATTTGTAATCACCG+TGG | + | chr8.4:13642733-13642752 | MS.gene036641:intron | 50.0% | |
| GAGTTTGAGGACAGTCGTCA+AGG | + | chr8.4:13642350-13642369 | MS.gene036641:CDS | 50.0% | |
| GCATAGGTTCTCGCAGACAT+TGG | + | chr8.4:13642888-13642907 | MS.gene036641:intron | 50.0% | |
| GCCCATGCTTCAAGCCAAAA+AGG | - | chr8.4:13641850-13641869 | None:intergenic | 50.0% | |
| GGTACATACTAGACCATGGC+TGG | + | chr8.4:13643702-13643721 | MS.gene036641:intron | 50.0% | |
| TACACCGACACTTCAGACTG+AGG | - | chr8.4:13643135-13643154 | None:intergenic | 50.0% | |
| TATTTCTTTAGGTGCGGGGC+TGG | + | chr8.4:13640677-13640696 | MS.gene036641:intron | 50.0% | |
| TGTTGGGGATGGTGAGAACA+AGG | + | chr8.4:13642099-13642118 | MS.gene036641:CDS | 50.0% | |
| ! | ACACCCTCAGTCTGAAGTGT+CGG | + | chr8.4:13643128-13643147 | MS.gene036641:intron | 50.0% |
| ! | CAGGTGTGTTGTTCTTGCCA+TGG | - | chr8.4:13640434-13640453 | None:intergenic | 50.0% |
| ! | CTGAGTCAAACTTTGGGGAC+AGG | + | chr8.4:13641045-13641064 | MS.gene036641:CDS | 50.0% |
| ! | CTGGGGTTAGCAGTTACTAG+AGG | + | chr8.4:13640696-13640715 | MS.gene036641:intron | 50.0% |
| ! | GCACTGACACAATACCGACT+CGG | + | chr8.4:13643075-13643094 | MS.gene036641:intron | 50.0% |
| !!! | CCCCTTTTTGGCTTGAAGCA+TGG | + | chr8.4:13641845-13641864 | MS.gene036641:intron | 50.0% |
| GAAGCCCAATGTGGCAGCAT+AGG | - | chr8.4:13639905-13639924 | None:intergenic | 55.0% | |
| GACCCCTATGGCTTGAAGCA+TGG | + | chr8.4:13642860-13642879 | MS.gene036641:intron | 55.0% | |
| TTTCTTTAGGTGCGGGGCTG+GGG | + | chr8.4:13640679-13640698 | MS.gene036641:intron | 55.0% | |
| ! | AACTTTGGGGACAGGCGTCA+AGG | + | chr8.4:13641053-13641072 | MS.gene036641:CDS | 55.0% |
| !! | GTGTGATTGGGTGGTGGAAC+AGG | + | chr8.4:13645145-13645164 | MS.gene036641:intron | 55.0% |
| CATGGCTGGTGCAATGCAGC+GGG | + | chr8.4:13643716-13643735 | MS.gene036641:intron | 60.0% | |
| CCATGGCTGGTGCAATGCAG+CGG | + | chr8.4:13643715-13643734 | MS.gene036641:intron | 60.0% | |
| CCGCTGCATTGCACCAGCCA+TGG | - | chr8.4:13643718-13643737 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 13639727 | 13645235 | 13639727 | ID=MS.gene036641 |
| chr8.4 | mRNA | 13639727 | 13645235 | 13639727 | ID=MS.gene036641.t1;Parent=MS.gene036641 |
| chr8.4 | exon | 13639727 | 13639786 | 13639727 | ID=MS.gene036641.t1.exon1;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13639727 | 13639786 | 13639727 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13639884 | 13639934 | 13639884 | ID=MS.gene036641.t1.exon2;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13639884 | 13639934 | 13639884 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13640228 | 13640383 | 13640228 | ID=MS.gene036641.t1.exon3;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13640228 | 13640383 | 13640228 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13640487 | 13640561 | 13640487 | ID=MS.gene036641.t1.exon4;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13640487 | 13640561 | 13640487 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13640817 | 13641107 | 13640817 | ID=MS.gene036641.t1.exon5;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13640817 | 13641107 | 13640817 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13642061 | 13642172 | 13642061 | ID=MS.gene036641.t1.exon6;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13642061 | 13642172 | 13642061 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13642328 | 13642416 | 13642328 | ID=MS.gene036641.t1.exon7;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13642328 | 13642416 | 13642328 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13643625 | 13643702 | 13643625 | ID=MS.gene036641.t1.exon8;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13643625 | 13643702 | 13643625 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13644617 | 13644742 | 13644617 | ID=MS.gene036641.t1.exon9;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13644617 | 13644742 | 13644617 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| chr8.4 | exon | 13645167 | 13645235 | 13645167 | ID=MS.gene036641.t1.exon10;Parent=MS.gene036641.t1 |
| chr8.4 | CDS | 13645167 | 13645235 | 13645167 | ID=cds.MS.gene036641.t1;Parent=MS.gene036641.t1 |
| Gene Sequence |
| Protein sequence |
