Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036756.t1 | RHN63957.1 | 96.9 | 162 | 5 | 0 | 1 | 162 | 30 | 191 | 1.60E-84 | 322 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036756.t1 | Q8GW46 | 75.2 | 145 | 30 | 2 | 1 | 145 | 25 | 163 | 1.9e-54 | 213.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036756.t1 | A0A396IM32 | 96.9 | 162 | 5 | 0 | 1 | 162 | 30 | 191 | 1.1e-84 | 322.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene036756.t1 | TF | C2C2-YABBY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036756.t1 | MTR_4g114730 | 96.296 | 162 | 6 | 0 | 1 | 162 | 30 | 191 | 3.84e-117 | 329 |
| MS.gene036756.t1 | MTR_2g087740 | 57.143 | 154 | 58 | 3 | 1 | 146 | 28 | 181 | 2.48e-50 | 160 |
| MS.gene036756.t1 | MTR_4g025900 | 51.977 | 177 | 59 | 4 | 1 | 157 | 39 | 209 | 4.58e-45 | 147 |
| MS.gene036756.t1 | MTR_4g101660 | 55.629 | 151 | 49 | 4 | 1 | 136 | 34 | 181 | 1.15e-40 | 136 |
| MS.gene036756.t1 | MTR_4g050300 | 55.921 | 152 | 51 | 6 | 1 | 146 | 25 | 166 | 1.68e-40 | 134 |
| MS.gene036756.t1 | MTR_5g034030 | 48.951 | 143 | 51 | 4 | 1 | 129 | 28 | 162 | 6.16e-36 | 124 |
| MS.gene036756.t1 | MTR_5g046230 | 39.259 | 135 | 63 | 2 | 1 | 128 | 33 | 155 | 8.88e-23 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036756.t1 | AT2G26580 | 75.172 | 145 | 30 | 2 | 1 | 145 | 25 | 163 | 6.66e-74 | 219 |
| MS.gene036756.t1 | AT2G26580 | 75.172 | 145 | 30 | 2 | 1 | 145 | 25 | 163 | 6.66e-74 | 219 |
| MS.gene036756.t1 | AT1G08465 | 55.128 | 156 | 48 | 4 | 1 | 144 | 24 | 169 | 1.79e-47 | 152 |
| MS.gene036756.t1 | AT2G45190 | 54.605 | 152 | 53 | 4 | 1 | 136 | 39 | 190 | 1.24e-43 | 144 |
| MS.gene036756.t1 | AT4G00180 | 49.704 | 169 | 51 | 4 | 1 | 138 | 8 | 173 | 2.24e-38 | 130 |
| MS.gene036756.t1 | AT4G00180 | 49.704 | 169 | 51 | 4 | 1 | 138 | 39 | 204 | 8.42e-38 | 129 |
| MS.gene036756.t1 | AT2G45190 | 92.982 | 57 | 4 | 0 | 80 | 136 | 70 | 126 | 3.27e-34 | 118 |
| MS.gene036756.t1 | AT1G23420 | 47.945 | 146 | 62 | 3 | 1 | 132 | 35 | 180 | 7.47e-32 | 114 |
| MS.gene036756.t1 | AT1G23420 | 47.945 | 146 | 62 | 3 | 1 | 132 | 66 | 211 | 1.87e-31 | 114 |
| MS.gene036756.t1 | AT1G69180 | 40.625 | 128 | 70 | 2 | 1 | 128 | 35 | 156 | 2.11e-24 | 93.6 |
Find 34 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATCCTATCGTTGCATT+TGG | 0.296610 | 8.2:-13636539 | None:intergenic |
| GCTTCTCTGTGACTGATATC+AGG | 0.363234 | 8.2:-13637049 | None:intergenic |
| GCAATCCTATCGTTGCATTT+GGG | 0.399881 | 8.2:-13636538 | None:intergenic |
| ACTGTCATGGCAAGATGTTC+AGG | 0.423195 | 8.2:+13635242 | MS.gene036756:CDS |
| GTGGTCACTGCACAAATCTA+TGG | 0.424333 | 8.2:+13635190 | MS.gene036756:CDS |
| AGGTACACGTTGCCTCTTCT+CGG | 0.458670 | 8.2:-13636860 | None:intergenic |
| ATCAGCCCAAAATGAATATG+AGG | 0.476928 | 8.2:-13637190 | None:intergenic |
| CACCCATGTTACTGAGGAAA+GGG | 0.483814 | 8.2:+13636579 | MS.gene036756:CDS |
| GAGCAACAATCAAGCTAAGA+TGG | 0.499438 | 8.2:+13637219 | MS.gene036756:CDS |
| TCCTCAGTAACATGGGTGGT+TGG | 0.501150 | 8.2:-13636574 | None:intergenic |
| ACTGCATGAATCCAGAGTAT+AGG | 0.501971 | 8.2:+13636497 | MS.gene036756:CDS |
| GGTACACGTTGCCTCTTCTC+GGG | 0.503039 | 8.2:-13636859 | None:intergenic |
| CAACCCTTTCCTCAGTAACA+TGG | 0.504380 | 8.2:-13636582 | None:intergenic |
| TGAGAAGCGTTTGATGTCTA+CGG | 0.515736 | 8.2:+13637350 | MS.gene036756:CDS |
| CCTATCGTTGCATTTGGGAG+TGG | 0.533061 | 8.2:-13636533 | None:intergenic |
| AATTTCCAGCTCCCGAGAAG+AGG | 0.540719 | 8.2:+13636848 | MS.gene036756:intron |
| AAATCTATGGTCTGTAAACA+TGG | 0.552321 | 8.2:+13635203 | MS.gene036756:CDS |
| CCGCGTTTCAGTCACTGTCA+TGG | 0.556178 | 8.2:+13635229 | MS.gene036756:CDS |
| TCTGGATTCATGCAGTGGCT+AGG | 0.562771 | 8.2:-13636490 | None:intergenic |
| CTAGTTCGAATCCTATACTC+TGG | 0.567724 | 8.2:-13636508 | None:intergenic |
| GGAAGAGATTCAGAGGATCA+AGG | 0.576711 | 8.2:+13637018 | MS.gene036756:CDS |
| CCACCCATGTTACTGAGGAA+AGG | 0.581614 | 8.2:+13636578 | MS.gene036756:CDS |
| ATGAACTGATTATAAGCAGA+AGG | 0.586762 | 8.2:-13636880 | None:intergenic |
| CCACTCCCAAATGCAACGAT+AGG | 0.592244 | 8.2:+13636533 | MS.gene036756:CDS |
| ATTTCAAACAAGCTACTGCA+TGG | 0.595371 | 8.2:-13635153 | None:intergenic |
| TATGCAGGGAAGAGATTCAG+AGG | 0.621557 | 8.2:+13637011 | MS.gene036756:intron |
| AACCCTTTCCTCAGTAACAT+GGG | 0.626838 | 8.2:-13636581 | None:intergenic |
| TATACTCTGGATTCATGCAG+TGG | 0.629931 | 8.2:-13636495 | None:intergenic |
| TGTGCAGTGACCACATCGAA+CGG | 0.632060 | 8.2:-13635181 | None:intergenic |
| ACCAACCACCCATGTTACTG+AGG | 0.669098 | 8.2:+13636573 | MS.gene036756:CDS |
| GAAATAGTGACCGTTCGATG+TGG | 0.670282 | 8.2:+13635171 | MS.gene036756:CDS |
| CCTTTCCTCAGTAACATGGG+TGG | 0.674444 | 8.2:-13636578 | None:intergenic |
| CCATGACAGTGACTGAAACG+CGG | 0.691630 | 8.2:-13635229 | None:intergenic |
| TGACAGTGACTGAAACGCGG+CGG | 0.753574 | 8.2:-13635226 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGATTGAAAAATTAAAT+TGG | - | chr8.2:13637267-13637286 | None:intergenic | 10.0% |
| !!! | ATTATTTCTTTATTTTTTAG+TGG | + | chr8.2:13637158-13637177 | MS.gene036756:intron | 10.0% |
| !!! | TGATTATTTTTATTATATTC+AGG | + | chr8.2:13637323-13637342 | MS.gene036756:intron | 10.0% |
| !!! | TTATTTCTTTATTTTTTAGT+GGG | + | chr8.2:13637159-13637178 | MS.gene036756:intron | 10.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8.2:13635396-13635415 | MS.gene036756:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8.2:13635395-13635414 | MS.gene036756:intron | 15.0% |
| !! | TTTAAATAGATAGGAAAAAA+AGG | - | chr8.2:13636644-13636663 | None:intergenic | 15.0% |
| !!! | CATAATTTTATATATATGCA+GGG | + | chr8.2:13636997-13637016 | MS.gene036756:intron | 15.0% |
| !!! | TCATAATTTTATATATATGC+AGG | + | chr8.2:13636996-13637015 | MS.gene036756:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8.2:13635355-13635374 | MS.gene036756:intron | 20.0% |
| !! | AATTTAGAAAATAAACTACG+TGG | - | chr8.2:13636746-13636765 | None:intergenic | 20.0% |
| !! | ATCAATGAAACAATAAAGTA+AGG | - | chr8.2:13636458-13636477 | None:intergenic | 20.0% |
| !!! | ATTTTCCTCATATTCATTTT+GGG | + | chr8.2:13637185-13637204 | MS.gene036756:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8.2:13635465-13635484 | MS.gene036756:intron | 20.0% |
| !!! | GTATATATAGTTGATTCAAT+TGG | + | chr8.2:13636942-13636961 | MS.gene036756:intron | 20.0% |
| ! | AATTGAATTACTACTAGCTA+GGG | - | chr8.2:13636025-13636044 | None:intergenic | 25.0% |
| ! | AGTCTATGAAAAAGGAAAAT+AGG | - | chr8.2:13635829-13635848 | None:intergenic | 25.0% |
| ! | ATGAAACAATAAAGTAAGGA+AGG | - | chr8.2:13636454-13636473 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8.2:13635354-13635373 | MS.gene036756:intron | 25.0% |
| ! | TAATTGAATTACTACTAGCT+AGG | - | chr8.2:13636026-13636045 | None:intergenic | 25.0% |
| ! | TAGGAAAAGATCATATATCT+AGG | + | chr8.2:13635956-13635975 | MS.gene036756:intron | 25.0% |
| !! | AAAACATTTTCAGTATGGTT+TGG | - | chr8.2:13635879-13635898 | None:intergenic | 25.0% |
| !! | AAGAAAAGTGTGTAAATGAA+TGG | + | chr8.2:13635331-13635350 | MS.gene036756:intron | 25.0% |
| !! | AGAAAAGTGTGTAAATGAAT+GGG | + | chr8.2:13635332-13635351 | MS.gene036756:intron | 25.0% |
| !! | CATTTTCCTCATATTCATTT+TGG | + | chr8.2:13637184-13637203 | MS.gene036756:CDS | 25.0% |
| !! | TAAGCAAAACATTTTCAGTA+TGG | - | chr8.2:13635884-13635903 | None:intergenic | 25.0% |
| !! | TAGTATTTCTATGTTCGTTA+AGG | - | chr8.2:13636778-13636797 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr8.2:13635442-13635461 | MS.gene036756:intron | 25.0% |
| !!! | AAATAGGTTTGTTTTTATGG+CGG | - | chr8.2:13635813-13635832 | None:intergenic | 25.0% |
| !!! | GGAAAATAGGTTTGTTTTTA+TGG | - | chr8.2:13635816-13635835 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8.2:13635464-13635483 | MS.gene036756:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr8.2:13635443-13635462 | MS.gene036756:intron | 25.0% |
| !!! | TTGTTTCATTGATTTTCTTC+AGG | + | chr8.2:13636465-13636484 | MS.gene036756:intron | 25.0% |
| AAAATAGATCTATCCTAGCT+AGG | + | chr8.2:13635571-13635590 | MS.gene036756:intron | 30.0% | |
| AAATCTATGGTCTGTAAACA+TGG | + | chr8.2:13635203-13635222 | MS.gene036756:CDS | 30.0% | |
| ATGAACTGATTATAAGCAGA+AGG | - | chr8.2:13636883-13636902 | None:intergenic | 30.0% | |
| ATTGAATTACTACTAGCTAG+GGG | - | chr8.2:13636024-13636043 | None:intergenic | 30.0% | |
| ! | AAAATCGAAGTATCTTGGTT+TGG | + | chr8.2:13635654-13635673 | MS.gene036756:intron | 30.0% |
| ! | GAGAGTATATAGTAAACTCA+CGG | - | chr8.2:13636615-13636634 | None:intergenic | 30.0% |
| ! | TTGAGAAAATCGAAGTATCT+TGG | + | chr8.2:13635649-13635668 | MS.gene036756:intron | 30.0% |
| !! | CTTGTTAAGTTGGAAATACT+AGG | - | chr8.2:13636393-13636412 | None:intergenic | 30.0% |
| ACAGTTGTTGGTATGAATGA+AGG | - | chr8.2:13636219-13636238 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr8.2:13635478-13635497 | MS.gene036756:intron | 35.0% | |
| AGCTACAAAGCTAGTTAGTT+AGG | + | chr8.2:13635685-13635704 | MS.gene036756:intron | 35.0% | |
| AGTATATAGTAAACTCACGG+CGG | - | chr8.2:13636612-13636631 | None:intergenic | 35.0% | |
| ATCAATGCTTTGTACAGAGA+TGG | - | chr8.2:13636340-13636359 | None:intergenic | 35.0% | |
| ATCAGCCCAAAATGAATATG+AGG | - | chr8.2:13637193-13637212 | None:intergenic | 35.0% | |
| ATTTCAAACAAGCTACTGCA+TGG | - | chr8.2:13635156-13635175 | None:intergenic | 35.0% | |
| CATACCAACAACTGTCAATT+GGG | + | chr8.2:13636224-13636243 | MS.gene036756:intron | 35.0% | |
| TAAACTACGTGGCTATGATA+TGG | - | chr8.2:13636735-13636754 | None:intergenic | 35.0% | |
| TCATACCAACAACTGTCAAT+TGG | + | chr8.2:13636223-13636242 | MS.gene036756:intron | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr8.2:13635309-13635328 | None:intergenic | 35.0% | |
| TGTGTAAATGAATGGGAAAG+TGG | + | chr8.2:13635339-13635358 | MS.gene036756:intron | 35.0% | |
| TTCTGACGAGTCTATGAAAA+AGG | - | chr8.2:13635837-13635856 | None:intergenic | 35.0% | |
| TTGAATTACTACTAGCTAGG+GGG | - | chr8.2:13636023-13636042 | None:intergenic | 35.0% | |
| ! | AAAGACTTTTGCCTTTGCTT+TGG | + | chr8.2:13635905-13635924 | MS.gene036756:intron | 35.0% |
| ! | AAGACTTTTGCCTTTGCTTT+GGG | + | chr8.2:13635906-13635925 | MS.gene036756:intron | 35.0% |
| ! | ACACATCAAATCAGTTCTGA+AGG | - | chr8.2:13635937-13635956 | None:intergenic | 35.0% |
| ! | ACAGTTCTGTCTTGTTAAGT+TGG | - | chr8.2:13636403-13636422 | None:intergenic | 35.0% |
| ! | TATTCATTTTGGGCTGATGT+TGG | + | chr8.2:13637195-13637214 | MS.gene036756:CDS | 35.0% |
| !! | AAGTATCTTGGTTTGGCTTT+GGG | + | chr8.2:13635661-13635680 | MS.gene036756:intron | 35.0% |
| !! | ATTTTCAGTATGGTTTGGCT+TGG | - | chr8.2:13635874-13635893 | None:intergenic | 35.0% |
| !! | TCAGAACTGATTTGATGTGT+AGG | + | chr8.2:13635937-13635956 | MS.gene036756:intron | 35.0% |
| !!! | ATTTTTGGTGTAGATCCCTA+AGG | + | chr8.2:13636193-13636212 | MS.gene036756:intron | 35.0% |
| AACCCTTTCCTCAGTAACAT+GGG | - | chr8.2:13636584-13636603 | None:intergenic | 40.0% | |
| ACTGCATGAATCCAGAGTAT+AGG | + | chr8.2:13636497-13636516 | MS.gene036756:CDS | 40.0% | |
| CAAAGTAGGTCACTTATACC+GGG | - | chr8.2:13635295-13635314 | None:intergenic | 40.0% | |
| CCAAAGTAGGTCACTTATAC+CGG | - | chr8.2:13635296-13635315 | None:intergenic | 40.0% | |
| CTAGTTCGAATCCTATACTC+TGG | - | chr8.2:13636511-13636530 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr8.2:13635479-13635498 | MS.gene036756:intron | 40.0% | |
| GAAATCAAAGAAGCCTAGCT+AGG | - | chr8.2:13635587-13635606 | None:intergenic | 40.0% | |
| GAAGGTAATACCCAAAGCAA+AGG | - | chr8.2:13635919-13635938 | None:intergenic | 40.0% | |
| GAGCAACAATCAAGCTAAGA+TGG | + | chr8.2:13637219-13637238 | MS.gene036756:CDS | 40.0% | |
| GCAATCCTATCGTTGCATTT+GGG | - | chr8.2:13636541-13636560 | None:intergenic | 40.0% | |
| TATACTCTGGATTCATGCAG+TGG | - | chr8.2:13636498-13636517 | None:intergenic | 40.0% | |
| TGCAATCCTATCGTTGCATT+TGG | - | chr8.2:13636542-13636561 | None:intergenic | 40.0% | |
| TGGTATGAATGAAGGCCTTA+GGG | - | chr8.2:13636211-13636230 | None:intergenic | 40.0% | |
| TTGGTATGAATGAAGGCCTT+AGG | - | chr8.2:13636212-13636231 | None:intergenic | 40.0% | |
| ! | AGCTAGGCTTCTTTGATTTC+TGG | + | chr8.2:13635587-13635606 | MS.gene036756:intron | 40.0% |
| ! | ATTTTCCAGAAACCCTAGCT+AGG | - | chr8.2:13635620-13635639 | None:intergenic | 40.0% |
| ! | TTTTATGGCGGCTTACTTAC+AGG | - | chr8.2:13635801-13635820 | None:intergenic | 40.0% |
| !! | AGTATCTTGGTTTGGCTTTG+GGG | + | chr8.2:13635662-13635681 | MS.gene036756:intron | 40.0% |
| !! | GAAGTATCTTGGTTTGGCTT+TGG | + | chr8.2:13635660-13635679 | MS.gene036756:intron | 40.0% |
| !! | TGAGAAGCGTTTGATGTCTA+CGG | + | chr8.2:13637350-13637369 | MS.gene036756:CDS | 40.0% |
| ACTGTCATGGCAAGATGTTC+AGG | + | chr8.2:13635242-13635261 | MS.gene036756:CDS | 45.0% | |
| AGCTACTGCCTAACTAGCTA+GGG | - | chr8.2:13635768-13635787 | None:intergenic | 45.0% | |
| ATTATATACTCCCTCCGTCC+CGG | + | chr8.2:13635274-13635293 | MS.gene036756:intron | 45.0% | |
| CAACAACTGTCAATTGGGCT+AGG | + | chr8.2:13636229-13636248 | MS.gene036756:intron | 45.0% | |
| CAACCCTTTCCTCAGTAACA+TGG | - | chr8.2:13636585-13636604 | None:intergenic | 45.0% | |
| CACCCATGTTACTGAGGAAA+GGG | + | chr8.2:13636579-13636598 | MS.gene036756:CDS | 45.0% | |
| CCGGTATAAGTGACCTACTT+TGG | + | chr8.2:13635293-13635312 | MS.gene036756:intron | 45.0% | |
| CTAGCCCAATTGACAGTTGT+TGG | - | chr8.2:13636231-13636250 | None:intergenic | 45.0% | |
| GAAATAGTGACCGTTCGATG+TGG | + | chr8.2:13635171-13635190 | MS.gene036756:CDS | 45.0% | |
| GCTTCTCTGTGACTGATATC+AGG | - | chr8.2:13637052-13637071 | None:intergenic | 45.0% | |
| GGAAGAGATTCAGAGGATCA+AGG | + | chr8.2:13637018-13637037 | MS.gene036756:CDS | 45.0% | |
| GTGGTCACTGCACAAATCTA+TGG | + | chr8.2:13635190-13635209 | MS.gene036756:CDS | 45.0% | |
| TATGCAGGGAAGAGATTCAG+AGG | + | chr8.2:13637011-13637030 | MS.gene036756:intron | 45.0% | |
| TCTGGATCCTAACCTAGCTA+GGG | + | chr8.2:13635605-13635624 | MS.gene036756:intron | 45.0% | |
| TTCTGGATCCTAACCTAGCT+AGG | + | chr8.2:13635604-13635623 | MS.gene036756:intron | 45.0% | |
| !! | TCAGTATGGTTTGGCTTGGT+GGG | - | chr8.2:13635870-13635889 | None:intergenic | 45.0% |
| !! | TTCAGTATGGTTTGGCTTGG+TGG | - | chr8.2:13635871-13635890 | None:intergenic | 45.0% |
| !! | TTTAAATATAAAATAACTAA+TGG | + | chr8.2:13636658-13636677 | MS.gene036756:intron | 5.0% |
| !!! | AATATTTTTATAATAAAGAT+TGG | - | chr8.2:13636075-13636094 | None:intergenic | 5.0% |
| !!! | TATTTTATATTTAAATAGAT+AGG | - | chr8.2:13636653-13636672 | None:intergenic | 5.0% |
| !!! | TTTTGTTTATTATATATTTT+TGG | + | chr8.2:13636178-13636197 | MS.gene036756:intron | 5.0% |
| AATTTCCAGCTCCCGAGAAG+AGG | + | chr8.2:13636848-13636867 | MS.gene036756:intron | 50.0% | |
| ACCAACCACCCATGTTACTG+AGG | + | chr8.2:13636573-13636592 | MS.gene036756:CDS | 50.0% | |
| AGGTACACGTTGCCTCTTCT+CGG | - | chr8.2:13636863-13636882 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr8.2:13635483-13635502 | MS.gene036756:intron | 50.0% | |
| CAGCTACTGCCTAACTAGCT+AGG | - | chr8.2:13635769-13635788 | None:intergenic | 50.0% | |
| CCACCCATGTTACTGAGGAA+AGG | + | chr8.2:13636578-13636597 | MS.gene036756:CDS | 50.0% | |
| CCACTCCCAAATGCAACGAT+AGG | + | chr8.2:13636533-13636552 | MS.gene036756:CDS | 50.0% | |
| CCAGAAACCCTAGCTAGGTT+AGG | - | chr8.2:13635615-13635634 | None:intergenic | 50.0% | |
| CCATGACAGTGACTGAAACG+CGG | - | chr8.2:13635232-13635251 | None:intergenic | 50.0% | |
| CCTAACCTAGCTAGGGTTTC+TGG | + | chr8.2:13635612-13635631 | MS.gene036756:intron | 50.0% | |
| CCTATCGTTGCATTTGGGAG+TGG | - | chr8.2:13636536-13636555 | None:intergenic | 50.0% | |
| CCTTTCCTCAGTAACATGGG+TGG | - | chr8.2:13636581-13636600 | None:intergenic | 50.0% | |
| GTAGGTCACTTATACCGGGA+CGG | - | chr8.2:13635291-13635310 | None:intergenic | 50.0% | |
| TATGGCGGCTTACTTACAGG+TGG | - | chr8.2:13635798-13635817 | None:intergenic | 50.0% | |
| TCCTCAGTAACATGGGTGGT+TGG | - | chr8.2:13636577-13636596 | None:intergenic | 50.0% | |
| TCTGGATTCATGCAGTGGCT+AGG | - | chr8.2:13636493-13636512 | None:intergenic | 50.0% | |
| TGAGCTAGCCCTAGCTAGTT+AGG | + | chr8.2:13635757-13635776 | MS.gene036756:intron | 50.0% | |
| TGTGCAGTGACCACATCGAA+CGG | - | chr8.2:13635184-13635203 | None:intergenic | 50.0% | |
| !! | ACTACTAGCTAGGGGGTGTT+TGG | - | chr8.2:13636016-13636035 | None:intergenic | 50.0% |
| !! | ATGGTTTGGCTTGGTGGGTT+AGG | - | chr8.2:13635865-13635884 | None:intergenic | 50.0% |
| CCGCGTTTCAGTCACTGTCA+TGG | + | chr8.2:13635229-13635248 | MS.gene036756:CDS | 55.0% | |
| GGTACACGTTGCCTCTTCTC+GGG | - | chr8.2:13636862-13636881 | None:intergenic | 55.0% | |
| GTCACTTATACCGGGACGGA+GGG | - | chr8.2:13635287-13635306 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr8.2:13635487-13635506 | MS.gene036756:intron | 55.0% | |
| TGACAGTGACTGAAACGCGG+CGG | - | chr8.2:13635229-13635248 | None:intergenic | 55.0% | |
| !! | CTAGCTAGGGCTAGCTCATC+AGG | - | chr8.2:13635755-13635774 | None:intergenic | 55.0% |
| GGTCACTTATACCGGGACGG+AGG | - | chr8.2:13635288-13635307 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr8.2:13635486-13635505 | MS.gene036756:intron | 60.0% | |
| GTGTAGTACTCCCTCCGTCC+CGG | - | chr8.2:13635500-13635519 | None:intergenic | 60.0% | |
| !! | AGGGGGTGTTTGGCTGGATG+AGG | - | chr8.2:13636006-13636025 | None:intergenic | 60.0% |
| !! | CTAGCTAGGGGGTGTTTGGC+TGG | - | chr8.2:13636012-13636031 | None:intergenic | 60.0% |
| CGTTGCCTCTTCTCGGGAGC+TGG | - | chr8.2:13636856-13636875 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 13635144 | 13637392 | 13635144 | ID=MS.gene036756 |
| chr8.2 | mRNA | 13635144 | 13637392 | 13635144 | ID=MS.gene036756.t1;Parent=MS.gene036756 |
| chr8.2 | exon | 13635144 | 13635263 | 13635144 | ID=MS.gene036756.t1.exon1;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13635144 | 13635263 | 13635144 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| chr8.2 | exon | 13636487 | 13636613 | 13636487 | ID=MS.gene036756.t1.exon2;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13636487 | 13636613 | 13636487 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| chr8.2 | exon | 13636857 | 13636905 | 13636857 | ID=MS.gene036756.t1.exon3;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13636857 | 13636905 | 13636857 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| chr8.2 | exon | 13637018 | 13637093 | 13637018 | ID=MS.gene036756.t1.exon4;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13637018 | 13637093 | 13637018 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| chr8.2 | exon | 13637178 | 13637246 | 13637178 | ID=MS.gene036756.t1.exon5;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13637178 | 13637246 | 13637178 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| chr8.2 | exon | 13637345 | 13637392 | 13637345 | ID=MS.gene036756.t1.exon6;Parent=MS.gene036756.t1 |
| chr8.2 | CDS | 13637345 | 13637392 | 13637345 | ID=cds.MS.gene036756.t1;Parent=MS.gene036756.t1 |
| Gene Sequence |
| Protein sequence |
