Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036821.t1 | XP_003609272.1 | 83.1 | 237 | 25 | 2 | 1 | 229 | 1 | 230 | 2.00E-88 | 335.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036821.t1 | Q9LT81 | 42.4 | 139 | 44 | 3 | 31 | 137 | 81 | 215 | 1.9e-23 | 110.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036821.t1 | G7JVB3 | 83.1 | 237 | 25 | 2 | 1 | 229 | 1 | 230 | 1.4e-88 | 335.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene036821.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036821.t1 | MTR_4g113940 | 72.963 | 270 | 33 | 2 | 1 | 230 | 1 | 270 | 1.63e-139 | 392 |
MS.gene036821.t1 | MTR_4g113890 | 84.810 | 237 | 21 | 2 | 1 | 229 | 1 | 230 | 5.34e-139 | 389 |
MS.gene036821.t1 | MTR_4g113860 | 45.130 | 308 | 90 | 7 | 1 | 230 | 1 | 307 | 2.74e-81 | 246 |
MS.gene036821.t1 | MTR_4g113970 | 45.344 | 247 | 54 | 6 | 1 | 167 | 1 | 246 | 2.18e-58 | 185 |
MS.gene036821.t1 | MTR_3g050390 | 41.250 | 240 | 75 | 8 | 31 | 230 | 15 | 228 | 1.03e-45 | 152 |
MS.gene036821.t1 | MTR_3g466460 | 61.176 | 85 | 10 | 2 | 169 | 230 | 10 | 94 | 1.26e-23 | 92.4 |
MS.gene036821.t1 | MTR_8g066730 | 36.364 | 110 | 44 | 1 | 54 | 137 | 91 | 200 | 1.42e-17 | 79.7 |
MS.gene036821.t1 | MTR_8g066730 | 36.364 | 110 | 44 | 1 | 54 | 137 | 91 | 200 | 1.88e-17 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036821.t1 | AT3G19360 | 34.228 | 298 | 93 | 8 | 31 | 230 | 81 | 373 | 1.77e-45 | 155 |
MS.gene036821.t1 | AT3G19360 | 34.228 | 298 | 93 | 8 | 31 | 230 | 81 | 373 | 1.77e-45 | 155 |
MS.gene036821.t1 | AT2G35430 | 33.166 | 199 | 91 | 9 | 55 | 230 | 71 | 250 | 1.85e-19 | 84.3 |
MS.gene036821.t1 | AT1G32360 | 33.913 | 115 | 45 | 2 | 54 | 137 | 90 | 204 | 3.01e-15 | 74.3 |
Find 61 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAACTAGCTTCTGCGAATT+TGG | 0.155359 | 8.1:+12688533 | None:intergenic |
ATGAAGATCCTGCACAATTT+AGG | 0.163729 | 8.1:-12688409 | MS.gene036821:CDS |
CCAAGTATACGTTTCTTCTT+AGG | 0.214369 | 8.1:+12687411 | None:intergenic |
TGAAGATCCTGCACAATTTA+GGG | 0.278155 | 8.1:-12688408 | MS.gene036821:CDS |
AGTCAGATCAATCGTATTTA+CGG | 0.310380 | 8.1:-12687378 | MS.gene036821:CDS |
GATACAGGATATTGTTCCTT+TGG | 0.336419 | 8.1:-12688347 | MS.gene036821:CDS |
TCAATCGTATTTACGGTGAT+TGG | 0.347052 | 8.1:-12687371 | MS.gene036821:CDS |
ATTTGTACTAAGTTCAGATT+TGG | 0.359410 | 8.1:-12688620 | MS.gene036821:CDS |
CACAATTTAGGGGCACTTAT+CGG | 0.370314 | 8.1:-12688397 | MS.gene036821:CDS |
AATTGCAGCTTCAGCTTCAA+TGG | 0.390999 | 8.1:+12687503 | None:intergenic |
AAATCAGAGTTACAAGTTCC+TGG | 0.400098 | 8.1:-12687531 | MS.gene036821:intron |
GACTTGCAGGGGAGGTGGTA+GGG | 0.419543 | 8.1:+12687460 | None:intergenic |
TGCAAGTCAACTTGTGGAAA+AGG | 0.437938 | 8.1:-12687445 | MS.gene036821:CDS |
CCTAAGAAGAAACGTATACT+TGG | 0.441257 | 8.1:-12687411 | MS.gene036821:CDS |
AGATTTGGTGCTTGTAGAAA+CGG | 0.444340 | 8.1:-12688605 | MS.gene036821:CDS |
CTGAGGCGGTGACATCTTAG+AGG | 0.449778 | 8.1:+12688772 | None:intergenic |
TTAGAGGTTGGAATATCATC+TGG | 0.452783 | 8.1:+12688788 | None:intergenic |
CACTTTGCTCATGGTGAAGA+AGG | 0.463092 | 8.1:-12688314 | MS.gene036821:intron |
TGTCTCAAGTGGAAGGATAC+AGG | 0.464303 | 8.1:-12688362 | MS.gene036821:CDS |
ACAAATTGCAACTTTGCTCA+TGG | 0.469357 | 8.1:-12688581 | MS.gene036821:CDS |
CTGATCTGTTTGATTGAGGA+AGG | 0.475163 | 8.1:+12688666 | None:intergenic |
CTCATGGGGCTGAAGAGATA+AGG | 0.488249 | 8.1:-12688565 | MS.gene036821:CDS |
TGTGCAAGAAGTATAGCAAT+GGG | 0.488339 | 8.1:-12688469 | MS.gene036821:CDS |
CAAATTGCAACTTTGCTCAT+GGG | 0.490368 | 8.1:-12688580 | MS.gene036821:CDS |
TGACTTGCAGGGGAGGTGGT+AGG | 0.490726 | 8.1:+12687459 | None:intergenic |
GATTGAGGAAGGGTCATCCT+TGG | 0.496966 | 8.1:+12688677 | None:intergenic |
AGCTTCTGCGAATTTGGAGG+TGG | 0.504943 | 8.1:+12688539 | None:intergenic |
CACAAGTTGACTTGCAGGGG+AGG | 0.509364 | 8.1:+12687452 | None:intergenic |
CCAAATTCGCAGAAGCTAGT+TGG | 0.511305 | 8.1:-12688533 | MS.gene036821:CDS |
ACTAGCTTCTGCGAATTTGG+AGG | 0.524749 | 8.1:+12688536 | None:intergenic |
GGAAGGGTCATCCTTGGAGG+AGG | 0.531078 | 8.1:+12688683 | None:intergenic |
GGCGGTGACATCTTAGAGGT+TGG | 0.533133 | 8.1:+12688776 | None:intergenic |
AATTTACACTTATCTGCATA+GGG | 0.538027 | 8.1:+12688437 | None:intergenic |
AACAATGACTTCAAAAGAGA+AGG | 0.542813 | 8.1:-12688734 | MS.gene036821:CDS |
CTCCCCTGCAAGTCAACTTG+TGG | 0.543090 | 8.1:-12687451 | MS.gene036821:CDS |
AAGTTGACTTGCAGGGGAGG+TGG | 0.548779 | 8.1:+12687455 | None:intergenic |
AAATTGCAACTTTGCTCATG+GGG | 0.550865 | 8.1:-12688579 | MS.gene036821:CDS |
AGGAGGGCATATCAATGCAT+TGG | 0.555491 | 8.1:+12688700 | None:intergenic |
TGAGGAAGGGTCATCCTTGG+AGG | 0.556539 | 8.1:+12688680 | None:intergenic |
CATTGATATGCCCTCCTCCA+AGG | 0.556864 | 8.1:-12688694 | MS.gene036821:CDS |
GAATTTACACTTATCTGCAT+AGG | 0.559420 | 8.1:+12688436 | None:intergenic |
TTTCCACAAGTTGACTTGCA+GGG | 0.560920 | 8.1:+12687448 | None:intergenic |
TAAGTGCCCCTAAATTGTGC+AGG | 0.568865 | 8.1:+12688401 | None:intergenic |
TGGTCTGATCTGTTTGATTG+AGG | 0.571695 | 8.1:+12688662 | None:intergenic |
CTGTGCAAGAAGTATAGCAA+TGG | 0.572239 | 8.1:-12688470 | MS.gene036821:CDS |
TCAGCTTCAATGGCTCCACC+AGG | 0.575223 | 8.1:+12687513 | None:intergenic |
CTAAGAAGAAACGTATACTT+GGG | 0.583825 | 8.1:-12687410 | MS.gene036821:CDS |
AAGAACTGTCACTTTGCTCA+TGG | 0.585017 | 8.1:-12688323 | MS.gene036821:CDS |
TTCCACAAGTTGACTTGCAG+GGG | 0.588906 | 8.1:+12687449 | None:intergenic |
AGACTAAGCTGTGTCTCAAG+TGG | 0.589149 | 8.1:-12688373 | MS.gene036821:CDS |
ATTGTGCAGGATCTTCATGA+AGG | 0.599081 | 8.1:+12688414 | None:intergenic |
TAAGCTGTGTCTCAAGTGGA+AGG | 0.609632 | 8.1:-12688369 | MS.gene036821:CDS |
AAAGTGACAGTTCTTTCCAA+AGG | 0.613225 | 8.1:+12688331 | None:intergenic |
TGATCTGTTTGATTGAGGAA+GGG | 0.618914 | 8.1:+12688667 | None:intergenic |
GAAGGGTCATCCTTGGAGGA+GGG | 0.622595 | 8.1:+12688684 | None:intergenic |
AATATCATCTGGAAAAGCCA+TGG | 0.624162 | 8.1:+12688799 | None:intergenic |
TTCAATGAAGAGAACTGAGG+CGG | 0.637828 | 8.1:+12688758 | None:intergenic |
GAAGATCCTGCACAATTTAG+GGG | 0.650410 | 8.1:-12688407 | MS.gene036821:CDS |
CAAGAAGTATAGCAATGGGG+AGG | 0.680526 | 8.1:-12688465 | MS.gene036821:CDS |
TCAGAGTTACAAGTTCCTGG+TGG | 0.718686 | 8.1:-12687528 | MS.gene036821:intron |
GTGCAAGAAGTATAGCAATG+GGG | 0.763140 | 8.1:-12688468 | MS.gene036821:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAAAAAGTTTTACATT+TGG | - | chr8.1:12688155-12688174 | MS.gene036821:intron | 10.0% |
!!! | GACAATTTTTTTTAAATATA+AGG | + | chr8.1:12688476-12688495 | None:intergenic | 10.0% |
!!! | TTTTTTTAAATATAAGGTCT+AGG | + | chr8.1:12688470-12688489 | None:intergenic | 15.0% |
!!! | CAATAACTCATTTTGATTAT+TGG | - | chr8.1:12687868-12687887 | MS.gene036821:intron | 20.0% |
!!! | TACTATAATTTCTAGTAGTT+TGG | - | chr8.1:12688183-12688202 | MS.gene036821:intron | 20.0% |
!!! | TTATAACAATTGCAACTTTT+TGG | - | chr8.1:12688557-12688576 | MS.gene036821:CDS | 20.0% |
! | AATGGATGATTACTATTGTA+TGG | - | chr8.1:12688120-12688139 | MS.gene036821:intron | 25.0% |
! | AATTTACACTTATCTGCATA+GGG | + | chr8.1:12687722-12687741 | None:intergenic | 25.0% |
! | AGTAATCATCCATTAGAATA+AGG | + | chr8.1:12688114-12688133 | None:intergenic | 25.0% |
! | ATTTGTACTAAGTTCAGATT+TGG | - | chr8.1:12687536-12687555 | MS.gene036821:intron | 25.0% |
!! | ACTTTAAGAAGAAACAAGTT+TGG | + | chr8.1:12688258-12688277 | None:intergenic | 25.0% |
!! | TTAAAGTTTCTGCTGATTAT+TGG | - | chr8.1:12688271-12688290 | MS.gene036821:intron | 25.0% |
!! | TTCGTGTTTTGTAGAAAATA+TGG | + | chr8.1:12687517-12687536 | None:intergenic | 25.0% |
!!! | CTCATTTTGATTATTGGTTT+TGG | - | chr8.1:12687874-12687893 | MS.gene036821:intron | 25.0% |
AACAATGACTTCAAAAGAGA+AGG | - | chr8.1:12687422-12687441 | MS.gene036821:CDS | 30.0% | |
AAGAGTCAGAACAATATACA+TGG | + | chr8.1:12688586-12688605 | None:intergenic | 30.0% | |
AGTCAGATCAATCGTATTTA+CGG | - | chr8.1:12688778-12688797 | MS.gene036821:CDS | 30.0% | |
ATCATCCATTAGAATAAGGA+TGG | + | chr8.1:12688110-12688129 | None:intergenic | 30.0% | |
CCTCAAAATTATTGATGAGT+CGG | + | chr8.1:12688312-12688331 | None:intergenic | 30.0% | |
CTAAGAAGAAACGTATACTT+GGG | - | chr8.1:12688746-12688765 | MS.gene036821:CDS | 30.0% | |
GAATTTACACTTATCTGCAT+AGG | + | chr8.1:12687723-12687742 | None:intergenic | 30.0% | |
GATGAACATAATACAATAGC+TGG | + | chr8.1:12688231-12688250 | None:intergenic | 30.0% | |
TGATTCCATCCTTATTCTAA+TGG | - | chr8.1:12688102-12688121 | MS.gene036821:intron | 30.0% | |
!! | TTTTTCAATGAAGAGAACTG+AGG | + | chr8.1:12687404-12687423 | None:intergenic | 30.0% |
!!! | AGGGTTTGTTGAATTTTCTA+TGG | + | chr8.1:12688680-12688699 | None:intergenic | 30.0% |
!!! | TTTGAATGTGTGTCATTTTG+TGG | - | chr8.1:12688022-12688041 | MS.gene036821:intron | 30.0% |
AAAGTGACAGTTCTTTCCAA+AGG | + | chr8.1:12687828-12687847 | None:intergenic | 35.0% | |
AAATCAGAGTTACAAGTTCC+TGG | - | chr8.1:12688625-12688644 | MS.gene036821:CDS | 35.0% | |
AAATTGCAACTTTGCTCATG+GGG | - | chr8.1:12687577-12687596 | MS.gene036821:intron | 35.0% | |
ACAAATTGCAACTTTGCTCA+TGG | - | chr8.1:12687575-12687594 | MS.gene036821:intron | 35.0% | |
ATCATACACTTGCACACAAA+TGG | + | chr8.1:12688498-12688517 | None:intergenic | 35.0% | |
ATGAAGATCCTGCACAATTT+AGG | - | chr8.1:12687747-12687766 | MS.gene036821:intron | 35.0% | |
CAAATTGCAACTTTGCTCAT+GGG | - | chr8.1:12687576-12687595 | MS.gene036821:intron | 35.0% | |
CCAAGTATACGTTTCTTCTT+AGG | + | chr8.1:12688748-12688767 | None:intergenic | 35.0% | |
CCTAAGAAGAAACGTATACT+TGG | - | chr8.1:12688745-12688764 | MS.gene036821:CDS | 35.0% | |
CTTAATACCACGGTCAAATA+AGG | - | chr8.1:12688378-12688397 | MS.gene036821:CDS | 35.0% | |
CTTATTTGACCGTGGTATTA+AGG | + | chr8.1:12688380-12688399 | None:intergenic | 35.0% | |
GATACAGGATATTGTTCCTT+TGG | - | chr8.1:12687809-12687828 | MS.gene036821:intron | 35.0% | |
TCAATCGTATTTACGGTGAT+TGG | - | chr8.1:12688785-12688804 | MS.gene036821:CDS | 35.0% | |
TGAAGATCCTGCACAATTTA+GGG | - | chr8.1:12687748-12687767 | MS.gene036821:intron | 35.0% | |
TGATCTGTTTGATTGAGGAA+GGG | + | chr8.1:12687492-12687511 | None:intergenic | 35.0% | |
TGTCTTCATCATCACAAATG+CGG | + | chr8.1:12688413-12688432 | None:intergenic | 35.0% | |
TGTTCTGACTCTTGAAGTAT+TGG | - | chr8.1:12688593-12688612 | MS.gene036821:CDS | 35.0% | |
TTAGAGGTTGGAATATCATC+TGG | + | chr8.1:12687371-12687390 | None:intergenic | 35.0% | |
! | CCGACTCATCAATAATTTTG+AGG | - | chr8.1:12688309-12688328 | MS.gene036821:intron | 35.0% |
! | TGTGCAAGAAGTATAGCAAT+GGG | - | chr8.1:12687687-12687706 | MS.gene036821:intron | 35.0% |
!! | AGATTTGGTGCTTGTAGAAA+CGG | - | chr8.1:12687551-12687570 | MS.gene036821:intron | 35.0% |
!! | TTGACAAAGCAAGTTCTGAA+TGG | - | chr8.1:12688075-12688094 | MS.gene036821:intron | 35.0% |
AATTGCAGCTTCAGCTTCAA+TGG | + | chr8.1:12688656-12688675 | None:intergenic | 40.0% | |
ATTGTGCAGGATCTTCATGA+AGG | + | chr8.1:12687745-12687764 | None:intergenic | 40.0% | |
CTGATCTGTTTGATTGAGGA+AGG | + | chr8.1:12687493-12687512 | None:intergenic | 40.0% | |
GAAGATCCTGCACAATTTAG+GGG | - | chr8.1:12687749-12687768 | MS.gene036821:intron | 40.0% | |
TGCAAGTCAACTTGTGGAAA+AGG | - | chr8.1:12688711-12688730 | MS.gene036821:CDS | 40.0% | |
TGGTCTGATCTGTTTGATTG+AGG | + | chr8.1:12687497-12687516 | None:intergenic | 40.0% | |
TTCAATGAAGAGAACTGAGG+CGG | + | chr8.1:12687401-12687420 | None:intergenic | 40.0% | |
! | CTGTGCAAGAAGTATAGCAA+TGG | - | chr8.1:12687686-12687705 | MS.gene036821:intron | 40.0% |
! | GCATTAACCTTATTTGACCG+TGG | + | chr8.1:12688388-12688407 | None:intergenic | 40.0% |
! | GTGCAAGAAGTATAGCAATG+GGG | - | chr8.1:12687688-12687707 | MS.gene036821:intron | 40.0% |
!! | AAGAACTGTCACTTTGCTCA+TGG | - | chr8.1:12687833-12687852 | MS.gene036821:intron | 40.0% |
!! | CACAATTTAGGGGCACTTAT+CGG | - | chr8.1:12687759-12687778 | MS.gene036821:intron | 40.0% |
!! | TTTCCACAAGTTGACTTGCA+GGG | + | chr8.1:12688711-12688730 | None:intergenic | 40.0% |
!!! | TTTTCCACAAGTTGACTTGC+AGG | + | chr8.1:12688712-12688731 | None:intergenic | 40.0% |
AGACTAAGCTGTGTCTCAAG+TGG | - | chr8.1:12687783-12687802 | MS.gene036821:intron | 45.0% | |
CACTTTGCTCATGGTGAAGA+AGG | - | chr8.1:12687842-12687861 | MS.gene036821:intron | 45.0% | |
CCAAATTCGCAGAAGCTAGT+TGG | - | chr8.1:12687623-12687642 | MS.gene036821:intron | 45.0% | |
TAAGCTGTGTCTCAAGTGGA+AGG | - | chr8.1:12687787-12687806 | MS.gene036821:intron | 45.0% | |
TAAGTGCCCCTAAATTGTGC+AGG | + | chr8.1:12687758-12687777 | None:intergenic | 45.0% | |
TCAGAGTTACAAGTTCCTGG+TGG | - | chr8.1:12688628-12688647 | MS.gene036821:CDS | 45.0% | |
TGCCACGATCCTTAATACCA+CGG | - | chr8.1:12688368-12688387 | MS.gene036821:CDS | 45.0% | |
TGGTATTAAGGATCGTGGCA+TGG | + | chr8.1:12688368-12688387 | None:intergenic | 45.0% | |
TGTCTCAAGTGGAAGGATAC+AGG | - | chr8.1:12687794-12687813 | MS.gene036821:intron | 45.0% | |
! | ACTAGCTTCTGCGAATTTGG+AGG | + | chr8.1:12687623-12687642 | None:intergenic | 45.0% |
! | AGGAGGGCATATCAATGCAT+TGG | + | chr8.1:12687459-12687478 | None:intergenic | 45.0% |
! | CAAGAAGTATAGCAATGGGG+AGG | - | chr8.1:12687691-12687710 | MS.gene036821:intron | 45.0% |
! | CCAACTAGCTTCTGCGAATT+TGG | + | chr8.1:12687626-12687645 | None:intergenic | 45.0% |
!! | TTCCACAAGTTGACTTGCAG+GGG | + | chr8.1:12688710-12688729 | None:intergenic | 45.0% |
AGCTTCTGCGAATTTGGAGG+TGG | + | chr8.1:12687620-12687639 | None:intergenic | 50.0% | |
CATTGATATGCCCTCCTCCA+AGG | - | chr8.1:12687462-12687481 | MS.gene036821:CDS | 50.0% | |
CTCATGGGGCTGAAGAGATA+AGG | - | chr8.1:12687591-12687610 | MS.gene036821:intron | 50.0% | |
GACCGTGGTATTAAGGATCG+TGG | + | chr8.1:12688373-12688392 | None:intergenic | 50.0% | |
GATTGAGGAAGGGTCATCCT+TGG | + | chr8.1:12687482-12687501 | None:intergenic | 50.0% | |
CTCCCCTGCAAGTCAACTTG+TGG | - | chr8.1:12688705-12688724 | MS.gene036821:CDS | 55.0% | |
CTGAGGCGGTGACATCTTAG+AGG | + | chr8.1:12687387-12687406 | None:intergenic | 55.0% | |
GAAGGGTCATCCTTGGAGGA+GGG | + | chr8.1:12687475-12687494 | None:intergenic | 55.0% | |
GGCGGTGACATCTTAGAGGT+TGG | + | chr8.1:12687383-12687402 | None:intergenic | 55.0% | |
TCAGCTTCAATGGCTCCACC+AGG | + | chr8.1:12688646-12688665 | None:intergenic | 55.0% | |
TGAGGAAGGGTCATCCTTGG+AGG | + | chr8.1:12687479-12687498 | None:intergenic | 55.0% | |
! | AAGGTCTAGGACCACGACTG+TGG | + | chr8.1:12688457-12688476 | None:intergenic | 55.0% |
!! | AAGTTGACTTGCAGGGGAGG+TGG | + | chr8.1:12688704-12688723 | None:intergenic | 55.0% |
!! | CACAAGTTGACTTGCAGGGG+AGG | + | chr8.1:12688707-12688726 | None:intergenic | 55.0% |
GACTTGCAGGGGAGGTGGTA+GGG | + | chr8.1:12688699-12688718 | None:intergenic | 60.0% | |
GGAAGGGTCATCCTTGGAGG+AGG | + | chr8.1:12687476-12687495 | None:intergenic | 60.0% | |
GTACGTCTCAGCCACAGTCG+TGG | - | chr8.1:12688443-12688462 | MS.gene036821:CDS | 60.0% | |
! | TGACTTGCAGGGGAGGTGGT+AGG | + | chr8.1:12688700-12688719 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 12687359 | 12688819 | 12687359 | ID=MS.gene036821 |
chr8.1 | mRNA | 12687359 | 12688819 | 12687359 | ID=MS.gene036821.t1;Parent=MS.gene036821 |
chr8.1 | exon | 12688315 | 12688819 | 12688315 | ID=MS.gene036821.t1.exon1;Parent=MS.gene036821.t1 |
chr8.1 | CDS | 12688315 | 12688819 | 12688315 | ID=cds.MS.gene036821.t1;Parent=MS.gene036821.t1 |
chr8.1 | exon | 12687359 | 12687546 | 12687359 | ID=MS.gene036821.t1.exon2;Parent=MS.gene036821.t1 |
chr8.1 | CDS | 12687359 | 12687546 | 12687359 | ID=cds.MS.gene036821.t1;Parent=MS.gene036821.t1 |
Gene Sequence |
Protein sequence |