AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036828

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036828.t1 MTR_4g113790 98.980 490 3 1 1 488 1 490 0.0 1002
MS.gene036828.t1 MTR_2g027240 56.219 402 147 7 64 455 179 561 1.74e-156 458
MS.gene036828.t1 MTR_6g004720 54.394 421 162 7 42 455 204 601 2.02e-152 448
MS.gene036828.t1 MTR_8g006870 55.335 403 157 6 56 454 337 720 1.41e-150 448
MS.gene036828.t1 MTR_7g081665 53.941 406 159 7 56 455 331 714 1.90e-150 447
MS.gene036828.t1 MTR_7g033640 55.750 400 152 7 64 455 207 589 2.08e-148 437
MS.gene036828.t1 MTR_7g104180 54.637 399 154 8 63 455 466 843 2.95e-144 435
MS.gene036828.t1 MTR_1g060790 53.676 408 160 8 56 455 435 821 1.95e-143 432
MS.gene036828.t1 MTR_8g089420 50.995 402 167 6 64 460 52 428 7.40e-139 407
MS.gene036828.t1 MTR_2g018990 49.188 431 180 7 64 488 57 454 1.08e-137 404
MS.gene036828.t1 MTR_3g010260 51.117 403 168 8 61 455 387 768 1.12e-137 416
MS.gene036828.t1 MTR_8g446990 47.748 444 198 8 25 455 61 483 1.94e-133 396
MS.gene036828.t1 MTR_2g062850 46.085 447 210 9 17 455 97 520 2.77e-133 397
MS.gene036828.t1 MTR_2g085065 50.129 387 157 8 73 447 71 433 4.14e-123 367
MS.gene036828.t1 MTR_2g069990 45.783 415 178 9 43 454 49 419 1.61e-121 364
MS.gene036828.t1 MTR_8g070530 41.388 389 168 6 64 452 572 900 7.29e-101 323
MS.gene036828.t1 MTR_2g095980 42.711 391 172 7 64 454 346 684 5.38e-97 308
MS.gene036828.t1 MTR_2g095980 42.711 391 172 7 64 454 601 939 7.04e-95 308
MS.gene036828.t1 MTR_2g095980 42.711 391 172 7 64 454 601 939 1.50e-94 308
MS.gene036828.t1 MTR_4g061610 40.863 394 161 9 64 454 619 943 1.02e-90 297
MS.gene036828.t1 MTR_2g098240 39.037 374 174 6 86 456 12 334 1.16e-78 250
MS.gene036828.t1 MTR_4g065080 37.500 392 189 10 88 456 12 370 2.22e-77 248
MS.gene036828.t1 MTR_8g011780 38.281 384 176 11 91 455 20 361 4.37e-73 238
MS.gene036828.t1 MTR_7g053200 35.806 391 202 11 81 458 1 355 1.01e-66 221
MS.gene036828.t1 MTR_4g035835 31.818 374 196 9 83 456 751 1065 1.21e-51 189
MS.gene036828.t1 MTR_5g069000 31.818 374 196 9 83 456 755 1069 3.17e-51 187
MS.gene036828.t1 MTR_6g470940 30.526 380 204 9 83 461 869 1189 3.62e-48 179
MS.gene036828.t1 MTR_1g069735 31.053 380 207 11 79 455 108 435 1.29e-47 171
MS.gene036828.t1 MTR_1g069735 31.053 380 207 11 79 455 108 435 1.53e-47 171
MS.gene036828.t1 MTR_1g069735 31.316 380 206 12 79 455 108 435 5.00e-47 171
MS.gene036828.t1 MTR_1g075880 31.135 379 209 11 79 455 105 433 3.38e-46 169
MS.gene036828.t1 MTR_1g042700 30.025 393 220 10 74 464 101 440 2.88e-45 166
MS.gene036828.t1 MTR_7g097150 31.496 381 204 12 79 455 108 435 3.24e-45 166
MS.gene036828.t1 MTR_3g104700 29.650 371 209 13 79 443 82 406 9.67e-42 156
MS.gene036828.t1 MTR_1g019340 28.871 381 218 11 79 456 96 426 8.34e-40 150
MS.gene036828.t1 MTR_1g442790 29.427 384 217 11 74 455 96 427 8.80e-40 150
MS.gene036828.t1 MTR_1g442790 29.427 384 217 11 74 455 96 427 9.09e-40 151
MS.gene036828.t1 MTR_1g019340 28.158 380 222 10 79 456 96 426 1.58e-39 150
MS.gene036828.t1 MTR_3g104700 28.871 381 216 14 79 443 82 423 6.25e-39 148
MS.gene036828.t1 MTR_2g040150 28.184 369 217 9 79 443 101 425 1.23e-37 145
MS.gene036828.t1 MTR_1g090917 26.790 377 194 7 79 454 39 334 1.03e-34 136
MS.gene036828.t1 MTR_1g090917 26.790 377 194 7 79 454 39 334 1.22e-34 135
MS.gene036828.t1 MTR_1g090917 27.018 285 131 6 171 454 1 209 3.17e-25 107
MS.gene036828.t1 MTR_1g090917 27.018 285 131 6 171 454 1 209 4.56e-25 106
MS.gene036828.t1 MTR_7g073520 38.509 161 92 4 85 245 142 295 1.14e-24 107
MS.gene036828.t1 MTR_7g073520 37.179 156 82 5 327 479 301 443 1.68e-21 97.4
MS.gene036828.t1 MTR_4g107280 39.552 134 69 3 327 457 210 334 1.82e-23 102
MS.gene036828.t1 MTR_4g107280 45.333 75 35 2 171 243 132 202 6.71e-13 70.5
MS.gene036828.t1 MTR_4g107280 39.552 134 69 3 327 457 249 373 2.67e-23 102
MS.gene036828.t1 MTR_4g107280 32.727 165 103 3 83 243 81 241 6.39e-22 98.2
MS.gene036828.t1 MTR_8g035890 26.923 338 151 12 88 423 13 256 6.54e-20 90.1
MS.gene036828.t1 MTR_3g088715 39.496 119 61 2 321 439 19 126 1.26e-18 82.8
MS.gene036828.t1 MTR_3g110405 31.720 186 116 3 61 244 7 183 2.27e-18 85.9
MS.gene036828.t1 MTR_3g110405 35.052 97 56 1 327 423 188 277 9.41e-12 66.2
MS.gene036828.t1 MTR_6g087000 37.226 137 71 4 325 456 910 1036 1.47e-17 86.7
MS.gene036828.t1 MTR_2g020380 24.405 336 164 8 88 423 1 246 4.15e-17 85.1
MS.gene036828.t1 MTR_4g029020 26.904 197 122 5 84 279 5 180 1.40e-15 79.3
MS.gene036828.t1 MTR_7g072575 26.396 197 125 5 83 279 4 180 2.96e-15 78.2
MS.gene036828.t1 MTR_3g099920 23.864 352 173 11 88 439 16 272 3.05e-15 78.6
MS.gene036828.t1 MTR_3g466480 29.630 189 113 5 91 279 21 189 1.03e-14 76.6
MS.gene036828.t1 MTR_1g076370 27.861 201 109 7 88 279 17 190 2.68e-14 75.1
MS.gene036828.t1 MTR_3g072320 26.396 197 123 5 83 279 4 178 3.29e-14 75.1
MS.gene036828.t1 MTR_5g075100 29.101 189 115 5 91 279 23 192 3.67e-14 74.7
MS.gene036828.t1 MTR_2g049790 25.758 198 128 5 82 279 14 192 7.10e-14 73.9
MS.gene036828.t1 MTR_8g040300 30.189 159 102 3 88 245 7 157 1.23e-13 71.6
MS.gene036828.t1 MTR_8g040300 39.175 97 52 1 327 423 161 250 2.03e-13 70.9
MS.gene036828.t1 MTR_4g131060 28.042 189 116 5 91 279 18 186 1.30e-13 73.2
MS.gene036828.t1 MTR_2g045470 27.500 200 126 6 80 279 9 189 1.82e-13 72.8
MS.gene036828.t1 MTR_3g466400 26.000 200 116 6 86 279 9 182 2.27e-13 72.4
MS.gene036828.t1 MTR_1g101630 31.447 159 98 4 89 243 39 190 3.20e-13 72.0
MS.gene036828.t1 MTR_1g096490 30.000 190 114 6 59 244 6 180 4.62e-13 71.6
MS.gene036828.t1 MTR_1g103760 27.500 200 119 7 83 279 4 180 6.19e-13 71.2
MS.gene036828.t1 MTR_5g067150 25.397 189 120 4 91 279 9 176 8.26e-13 70.5
MS.gene036828.t1 MTR_1g081000 27.215 158 106 4 88 243 1 151 1.03e-12 70.9
MS.gene036828.t1 MTR_5g067150 25.397 189 120 4 91 279 9 176 1.04e-12 70.1
MS.gene036828.t1 MTR_1g081000 27.215 158 106 4 88 243 1 151 1.17e-12 70.5
MS.gene036828.t1 MTR_5g088350 26.667 195 122 6 85 279 9 182 1.20e-12 70.1
MS.gene036828.t1 MTR_5g067150 26.752 157 99 2 123 279 36 176 1.36e-12 69.7
MS.gene036828.t1 MTR_5g088350 26.667 195 122 6 85 279 9 182 1.69e-12 68.9
MS.gene036828.t1 MTR_7g116390 44.211 95 47 2 332 425 176 265 2.06e-12 68.2
MS.gene036828.t1 MTR_5g088350 26.667 195 122 6 85 279 9 182 2.14e-12 69.3
MS.gene036828.t1 MTR_5g075060 25.381 197 123 6 85 279 6 180 2.18e-12 69.3
MS.gene036828.t1 MTR_8g024590 25.641 195 122 5 85 279 13 184 2.31e-12 69.3
MS.gene036828.t1 MTR_4g006970 25.510 196 122 5 86 279 15 188 2.81e-12 68.9
MS.gene036828.t1 MTR_0464s0040 28.571 161 107 4 83 243 4 156 3.41e-12 65.9
MS.gene036828.t1 MTR_8g024600 25.128 195 123 5 85 279 13 184 5.08e-12 68.2
MS.gene036828.t1 MTR_2g016340 26.263 198 126 6 82 279 3 180 5.46e-12 68.2
MS.gene036828.t1 MTR_1g040875 27.723 202 113 7 85 279 18 193 1.06e-11 67.0
MS.gene036828.t1 MTR_8g086380 26.804 194 118 5 88 279 23 194 1.35e-11 67.0
MS.gene036828.t1 MTR_1g013700 24.855 173 105 4 117 279 24 181 4.98e-11 65.1
MS.gene036828.t1 MTR_4g051648 25.478 157 110 3 88 243 5 155 5.67e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036828.t1 AT2G26700 59.515 536 158 15 1 488 1 525 0.0 599
MS.gene036828.t1 AT4G26610 53.153 444 188 5 15 455 47 473 4.48e-158 458
MS.gene036828.t1 AT5G47750 57.250 400 144 7 64 455 164 544 1.41e-156 457
MS.gene036828.t1 AT5G55910 53.670 436 172 10 64 488 82 498 1.64e-154 449
MS.gene036828.t1 AT5G55910 53.670 436 172 10 64 488 82 498 1.64e-154 449
MS.gene036828.t1 AT5G40030 54.478 402 148 8 63 455 85 460 6.26e-148 432
MS.gene036828.t1 AT3G52890 52.656 433 181 8 30 455 481 896 1.94e-143 435
MS.gene036828.t1 AT3G52890 52.656 433 181 8 30 455 481 896 1.94e-143 435
MS.gene036828.t1 AT3G52890 52.656 433 181 8 30 455 481 896 1.94e-143 435
MS.gene036828.t1 AT3G52890 52.656 433 181 8 30 455 481 896 1.94e-143 435
MS.gene036828.t1 AT2G44830 52.607 422 177 7 39 455 311 714 2.91e-143 429
MS.gene036828.t1 AT2G44830 52.607 422 177 7 39 455 311 714 2.91e-143 429
MS.gene036828.t1 AT2G44830 52.607 422 177 7 39 455 311 714 2.91e-143 429
MS.gene036828.t1 AT2G36350 55.025 398 159 7 64 455 532 915 1.26e-140 428
MS.gene036828.t1 AT5G03640 48.465 456 176 10 15 455 484 895 2.96e-140 426
MS.gene036828.t1 AT5G03640 48.465 456 176 10 15 455 484 895 2.96e-140 426
MS.gene036828.t1 AT2G34650 48.946 427 178 8 64 488 50 438 1.34e-138 406
MS.gene036828.t1 AT3G12690 50.000 406 177 6 53 455 144 526 1.69e-137 408
MS.gene036828.t1 AT3G12690 50.000 406 177 6 53 455 144 526 1.69e-137 408
MS.gene036828.t1 AT3G12690 50.000 406 177 6 53 455 144 526 1.69e-137 408
MS.gene036828.t1 AT1G79250 50.990 404 163 6 63 455 118 497 2.06e-137 407
MS.gene036828.t1 AT1G79250 50.990 404 163 6 63 455 118 497 2.06e-137 407
MS.gene036828.t1 AT1G79250 50.990 404 163 6 63 455 118 497 2.06e-137 407
MS.gene036828.t1 AT1G79250 50.990 404 163 6 63 455 118 497 2.06e-137 407
MS.gene036828.t1 AT1G16440 50.255 392 171 5 64 455 86 453 5.11e-134 397
MS.gene036828.t1 AT3G27580 50.739 406 161 10 64 455 153 533 4.76e-132 394
MS.gene036828.t1 AT3G27580 50.739 406 161 10 64 455 153 533 4.76e-132 394
MS.gene036828.t1 AT3G44610 49.867 377 142 9 91 446 71 421 1.11e-120 361
MS.gene036828.t1 AT3G14370 43.207 449 207 7 7 453 9 411 3.55e-117 353
MS.gene036828.t1 AT1G53700 49.600 375 143 7 83 454 85 416 3.65e-117 353
MS.gene036828.t1 AT5G58140 44.473 389 154 9 65 452 551 878 4.47e-105 334
MS.gene036828.t1 AT5G58140 44.473 389 154 9 65 452 551 878 4.47e-105 334
MS.gene036828.t1 AT5G58140 44.473 389 154 9 65 452 551 878 4.47e-105 334
MS.gene036828.t1 AT5G58140 44.473 389 154 9 65 452 551 878 4.47e-105 334
MS.gene036828.t1 AT5G58140 44.473 389 154 9 65 452 551 878 4.47e-105 334
MS.gene036828.t1 AT5G58140 44.531 384 151 9 65 447 551 873 3.90e-103 328
MS.gene036828.t1 AT3G45780 41.432 391 171 7 64 454 636 968 9.33e-94 305
MS.gene036828.t1 AT3G45780 41.432 391 171 7 64 454 636 968 9.33e-94 305
MS.gene036828.t1 AT1G51170 40.160 376 185 10 86 455 17 358 1.79e-73 238
MS.gene036828.t1 AT4G13000 36.802 394 187 12 86 470 15 355 2.60e-72 234
MS.gene036828.t1 AT3G20830 38.095 378 188 11 88 455 18 359 1.04e-66 220
MS.gene036828.t1 AT3G25250 37.209 387 177 11 87 456 11 348 7.75e-66 218
MS.gene036828.t1 AT1G48490 31.383 376 192 11 85 459 822 1132 1.49e-49 183
MS.gene036828.t1 AT1G48490 31.383 376 192 11 85 459 822 1132 1.49e-49 183
MS.gene036828.t1 AT1G48490 31.383 376 192 11 85 459 822 1132 1.49e-49 183
MS.gene036828.t1 AT1G48490 31.383 376 192 11 85 459 823 1133 1.52e-49 183
MS.gene036828.t1 AT1G45160 32.615 371 188 7 85 455 664 972 6.30e-49 181
MS.gene036828.t1 AT1G45160 32.615 371 188 7 85 455 664 972 6.68e-49 181
MS.gene036828.t1 AT1G30640 31.026 390 217 11 76 461 12 353 2.47e-48 173
MS.gene036828.t1 AT3G17850 29.293 396 220 8 85 479 876 1212 2.51e-48 179
MS.gene036828.t1 AT1G30640 31.026 390 217 11 76 461 105 446 1.06e-47 173
MS.gene036828.t1 AT1G30640 31.026 390 217 11 76 461 105 446 1.06e-47 173
MS.gene036828.t1 AT4G33080 30.081 369 211 10 79 443 82 407 3.43e-47 171
MS.gene036828.t1 AT4G33080 30.081 369 211 10 79 443 82 407 3.88e-47 171
MS.gene036828.t1 AT5G62310 29.383 405 222 12 58 456 715 1061 7.91e-45 169
MS.gene036828.t1 AT2G20470 29.815 379 212 10 79 455 112 438 1.59e-42 159
MS.gene036828.t1 AT3G23310 29.134 381 216 12 79 455 108 438 2.76e-42 158
MS.gene036828.t1 AT2G20470 29.815 379 212 10 79 455 112 438 3.59e-42 158
MS.gene036828.t1 AT2G20470 29.815 379 212 10 79 455 112 438 3.59e-42 158
MS.gene036828.t1 AT4G14350 29.319 382 214 12 79 456 107 436 1.09e-41 156
MS.gene036828.t1 AT4G14350 29.319 382 214 12 79 456 107 436 1.09e-41 156
MS.gene036828.t1 AT4G14350 29.319 382 214 12 79 456 107 436 1.09e-41 156
MS.gene036828.t1 AT4G14350 29.319 382 214 12 79 456 107 436 1.45e-41 156
MS.gene036828.t1 AT5G04510 29.080 337 162 6 122 457 70 330 1.42e-40 150
MS.gene036828.t1 AT5G04510 29.080 337 162 6 122 457 70 330 2.46e-40 152
MS.gene036828.t1 AT3G10540 28.783 337 163 6 122 457 71 331 9.93e-40 150
MS.gene036828.t1 AT5G09890 28.997 369 209 9 79 443 90 409 4.18e-39 149
MS.gene036828.t1 AT5G09890 28.997 369 209 9 79 443 90 409 4.20e-39 149
MS.gene036828.t1 AT1G03920 29.275 386 213 12 79 457 12 344 4.57e-39 147
MS.gene036828.t1 AT1G03920 29.275 386 213 12 79 457 125 457 1.76e-38 148
MS.gene036828.t1 AT1G03920 29.275 386 213 12 79 457 125 457 1.76e-38 148
MS.gene036828.t1 AT2G19400 28.108 370 216 9 80 443 94 419 4.08e-37 143
MS.gene036828.t1 AT5G58140 41.912 136 74 2 65 200 551 681 3.94e-30 124
MS.gene036828.t1 AT5G04510 27.365 296 139 5 122 417 70 289 6.93e-30 119
MS.gene036828.t1 AT3G08730 37.500 160 93 3 84 243 127 279 1.17e-24 107
MS.gene036828.t1 AT3G08730 42.222 135 62 6 326 454 286 410 1.02e-22 101
MS.gene036828.t1 AT3G08730 37.500 160 93 3 84 243 127 279 1.17e-24 107
MS.gene036828.t1 AT3G08730 42.222 135 62 6 326 454 286 410 1.02e-22 101
MS.gene036828.t1 AT3G08720 37.500 160 93 3 84 243 133 285 1.89e-24 106
MS.gene036828.t1 AT3G08720 40.602 133 66 5 327 456 293 415 9.12e-22 98.2
MS.gene036828.t1 AT3G08720 37.500 160 93 3 84 243 133 285 1.89e-24 106
MS.gene036828.t1 AT3G08720 40.602 133 66 5 327 456 293 415 9.12e-22 98.2
MS.gene036828.t1 AT3G08720 37.500 160 93 3 84 243 133 285 1.89e-24 106
MS.gene036828.t1 AT3G08720 40.602 133 66 5 327 456 293 415 9.12e-22 98.2
MS.gene036828.t1 AT3G08720 37.500 160 93 3 84 243 133 285 1.89e-24 106
MS.gene036828.t1 AT3G08720 40.602 133 66 5 327 456 293 415 9.12e-22 98.2
MS.gene036828.t1 AT2G20050 41.353 133 66 3 327 457 934 1056 1.12e-21 99.4
MS.gene036828.t1 AT2G20050 41.353 133 66 3 327 457 931 1053 1.19e-21 99.4
MS.gene036828.t1 AT2G45490 26.113 337 155 10 88 423 19 262 1.69e-19 89.4
MS.gene036828.t1 AT5G18700 33.735 166 93 5 88 251 1 151 8.51e-18 87.4
MS.gene036828.t1 AT2G45490 24.918 305 142 8 88 391 19 237 2.06e-15 76.6
MS.gene036828.t1 AT4G24400 28.571 189 114 6 91 279 9 176 1.14e-14 76.3
MS.gene036828.t1 AT4G24400 28.571 189 114 6 91 279 9 176 1.31e-14 76.3
MS.gene036828.t1 AT1G12680 31.013 158 94 4 89 245 105 248 2.00e-14 75.9
MS.gene036828.t1 AT5G45820 26.904 197 124 5 83 279 4 180 2.22e-14 75.5
MS.gene036828.t1 AT5G28290 28.481 158 104 4 88 243 1 151 2.67e-14 75.9
MS.gene036828.t1 AT5G28290 28.481 158 104 4 88 243 1 151 2.67e-14 75.9
MS.gene036828.t1 AT5G28290 28.481 158 104 4 88 243 1 151 2.99e-14 75.5
MS.gene036828.t1 AT4G32830 32.927 164 99 3 83 244 23 177 3.49e-14 73.6
MS.gene036828.t1 AT4G32830 34.021 97 57 1 327 423 182 271 7.76e-11 63.5
MS.gene036828.t1 AT2G34180 28.500 200 123 5 80 279 46 225 4.43e-14 74.7
MS.gene036828.t1 AT5G45810 28.125 192 118 5 88 279 25 196 1.09e-13 73.6
MS.gene036828.t1 AT2G26980 25.980 204 130 6 76 279 1 183 1.33e-13 73.2
MS.gene036828.t1 AT2G26980 25.980 204 130 6 76 279 11 193 1.36e-13 73.2
MS.gene036828.t1 AT5G01810 22.449 343 177 8 83 425 4 257 1.51e-13 72.4
MS.gene036828.t1 AT2G26980 25.980 204 130 6 76 279 1 183 1.66e-13 72.4
MS.gene036828.t1 AT5G01810 22.449 343 177 8 83 425 4 257 1.78e-13 72.8
MS.gene036828.t1 AT5G01810 22.449 343 177 8 83 425 4 257 1.78e-13 72.8
MS.gene036828.t1 AT3G04810 27.215 158 106 4 88 243 1 151 2.14e-13 73.2
MS.gene036828.t1 AT3G04810 27.215 158 106 4 88 243 1 151 2.14e-13 73.2
MS.gene036828.t1 AT3G04810 27.215 158 106 4 88 243 1 151 2.14e-13 73.2
MS.gene036828.t1 AT1G30270 26.455 189 120 5 91 279 31 200 2.71e-13 72.4
MS.gene036828.t1 AT2G26980 25.980 204 130 6 76 279 1 183 3.23e-13 72.0
MS.gene036828.t1 AT1G30270 26.455 189 120 5 91 279 31 200 3.24e-13 72.0
MS.gene036828.t1 AT2G26980 25.980 204 130 6 76 279 1 183 3.42e-13 70.1
MS.gene036828.t1 AT1G35670 31.250 160 99 5 89 244 24 176 3.75e-13 72.0
MS.gene036828.t1 AT2G25880 30.864 162 105 2 83 244 17 171 3.95e-13 70.5
MS.gene036828.t1 AT2G25880 33.673 98 58 1 327 424 176 266 1.96e-11 65.1
MS.gene036828.t1 AT3G17510 28.125 192 119 6 88 279 17 189 4.74e-13 71.6
MS.gene036828.t1 AT5G10930 26.131 199 126 8 82 279 3 181 6.10e-13 71.2
MS.gene036828.t1 AT1G54510 26.582 158 107 4 88 243 1 151 7.20e-13 71.2
MS.gene036828.t1 AT1G54510 26.582 158 107 4 88 243 1 151 7.20e-13 71.2
MS.gene036828.t1 AT1G54510 26.582 158 107 4 88 243 1 151 7.20e-13 71.2
MS.gene036828.t1 AT1G54510 26.582 158 107 4 88 243 1 151 7.20e-13 71.2
MS.gene036828.t1 AT4G18700 28.125 192 118 5 88 279 23 194 7.90e-13 70.9
MS.gene036828.t1 AT2G25880 30.864 162 105 2 83 244 30 184 8.17e-13 69.7
MS.gene036828.t1 AT2G25880 33.673 98 58 1 327 424 189 279 1.66e-11 65.5
MS.gene036828.t1 AT4G09570 31.250 160 99 5 89 244 23 175 9.36e-13 70.9
MS.gene036828.t1 AT5G25110 24.873 197 128 5 83 279 35 211 1.08e-12 70.5
MS.gene036828.t1 AT2G25880 30.864 162 105 2 83 244 78 232 1.36e-12 69.3
MS.gene036828.t1 AT2G25880 33.673 98 58 1 327 424 237 327 3.71e-11 65.1
MS.gene036828.t1 AT5G57630 31.056 161 89 7 121 279 37 177 1.36e-12 69.7
MS.gene036828.t1 AT5G57630 33.083 133 78 5 121 251 37 160 1.46e-12 69.7
MS.gene036828.t1 AT1G29230 28.125 192 118 5 88 279 71 242 1.54e-12 70.1
MS.gene036828.t1 AT1G08650 37.624 101 52 2 328 425 172 264 1.72e-12 68.6
MS.gene036828.t1 AT1G08650 37.624 101 52 2 328 425 172 264 2.14e-12 67.8
MS.gene036828.t1 AT1G01140 25.641 195 124 6 85 279 15 188 4.95e-12 68.2
MS.gene036828.t1 AT1G01140 25.641 195 124 6 85 279 15 188 5.39e-12 68.2
MS.gene036828.t1 AT5G21326 28.426 197 120 8 83 279 7 182 5.56e-12 68.2
MS.gene036828.t1 AT1G01140 25.641 195 124 6 85 279 15 188 6.08e-12 68.2
MS.gene036828.t1 AT3G04530 34.000 100 57 2 328 425 168 260 8.07e-12 66.2
MS.gene036828.t1 AT2G30360 27.979 193 113 6 91 279 21 191 8.19e-12 67.4
MS.gene036828.t1 AT5G35410 28.025 157 97 3 123 279 38 178 9.35e-12 67.0
MS.gene036828.t1 AT3G23000 26.601 203 116 7 84 279 18 194 1.10e-11 67.0
MS.gene036828.t1 AT2G38490 30.208 192 108 7 91 279 28 196 1.27e-11 67.0
MS.gene036828.t1 AT5G35410 28.025 157 97 3 123 279 38 178 1.37e-11 67.0
MS.gene036828.t1 AT2G25880 33.673 98 58 1 327 424 144 234 1.47e-11 65.1
MS.gene036828.t1 AT4G14580 27.919 197 122 6 84 279 14 191 2.68e-11 65.9
MS.gene036828.t1 AT5G58380 26.289 194 117 7 89 279 10 180 4.29e-11 65.5
MS.gene036828.t1 AT3G44200 26.380 163 111 4 88 247 5 161 4.59e-11 65.9
MS.gene036828.t1 AT3G44200 26.380 163 111 4 88 247 5 161 4.59e-11 65.9
MS.gene036828.t1 AT3G63280 26.582 158 107 4 88 243 1 151 5.50e-11 65.5
MS.gene036828.t1 AT3G63280 26.582 158 107 4 88 243 1 151 5.50e-11 65.5
MS.gene036828.t1 AT3G63280 26.582 158 107 4 88 243 1 151 5.50e-11 65.5
MS.gene036828.t1 AT2G46700 28.662 157 105 4 91 243 143 296 5.95e-11 65.1
MS.gene036828.t1 AT3G63280 26.582 158 107 4 88 243 55 205 8.80e-11 64.7
MS.gene036828.t1 AT5G66210 28.931 159 104 4 89 243 60 213 8.85e-11 64.3
MS.gene036828.t1 AT5G66210 28.931 159 104 4 89 243 60 213 8.89e-11 64.3
MS.gene036828.t1 AT5G66210 28.931 159 104 4 89 243 60 213 8.89e-11 64.3

Find 105 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTCCAATTCTCTTATT+TGG 0.104650 8.1:+12732645 None:intergenic
AGAGATGGAGAAGGAGATTT+TGG 0.135883 8.1:-12734179 MS.gene036828:CDS
TCATTACTCTTGTTTGGTTA+TGG 0.210794 8.1:-12734104 MS.gene036828:CDS
TCATTATTCTCACCTTTAAA+TGG 0.217434 8.1:+12732792 None:intergenic
CTATCTTTCTTGCTTAATTT+AGG 0.246885 8.1:+12732498 None:intergenic
CGACTTGGAAGCGGCGATAT+AGG 0.269325 8.1:-12734316 MS.gene036828:CDS
TTAGCACCAGAAGTTATATT+AGG 0.281277 8.1:-12732888 MS.gene036828:CDS
TAAGAGAATTGGAAGTTGTT+TGG 0.283584 8.1:-12732640 MS.gene036828:CDS
TATGGAAGAACACCATTTAA+AGG 0.284829 8.1:-12732804 MS.gene036828:CDS
GACTTGGAAGCGGCGATATA+GGG 0.314753 8.1:-12734315 MS.gene036828:CDS
TGCTTCTCATTACTCTTGTT+TGG 0.315005 8.1:-12734110 MS.gene036828:CDS
TAAGATTAGGAATAGAGTTT+TGG 0.318605 8.1:-12732523 MS.gene036828:CDS
AAGAGAATTGGAAGTTGTTT+GGG 0.326939 8.1:-12732639 MS.gene036828:CDS
ATTGGTTCAGCTACAAAATC+AGG 0.339583 8.1:+12732951 None:intergenic
CGCCGCTTCCAAGTCGCTTA+AGG 0.364380 8.1:+12734323 None:intergenic
AAGAATCCAAATAAGAGAAT+TGG 0.366255 8.1:-12732651 MS.gene036828:CDS
GCAACTTGGTTTGCCTTATG+AGG 0.367291 8.1:+12734409 None:intergenic
TTCTTGTCACTAGGAACCTC+AGG 0.376281 8.1:+12732546 None:intergenic
TTCAATATCTATGTAAGGTT+TGG 0.384816 8.1:+12734588 None:intergenic
TTATGCAGCTGAAACACTAT+TGG 0.390562 8.1:-12733300 MS.gene036828:CDS
AGATCTTATAAGCAAATTGT+TGG 0.395181 8.1:-12732676 MS.gene036828:CDS
AATTGATGTTTAAGCTGAAA+TGG 0.406023 8.1:+12732468 None:intergenic
TCTCTTACTAAAACATTCTC+TGG 0.406082 8.1:+12733230 None:intergenic
ATAGAGAAGCACTTGCTATA+AGG 0.417338 8.1:-12734219 MS.gene036828:CDS
ATCCAGCTACGGGTTGATTC+AGG 0.423573 8.1:+12734529 None:intergenic
AAATGTTCAAGAAGAGTTTG+AGG 0.433930 8.1:-12732985 MS.gene036828:CDS
CAGATAAGAAACCCTGTAGT+TGG 0.438439 8.1:-12734277 MS.gene036828:CDS
GCTTGTCGCCAACGCCAGCC+TGG 0.445242 8.1:-12734055 MS.gene036828:CDS
GAGGAGCTGCTGTCGTAGTC+AGG 0.447051 8.1:+12734565 None:intergenic
ACATACACCTCTTCTGTACT+AGG 0.447372 8.1:-12734445 MS.gene036828:CDS
TCAGGTTCAATATCTATGTA+AGG 0.451180 8.1:+12734583 None:intergenic
GCAGTGGATTGGTGGACATT+TGG 0.454096 8.1:-12732849 MS.gene036828:CDS
CCTTGTCCTAATATAACTTC+TGG 0.456195 8.1:+12732882 None:intergenic
GTCGCTTAAGGAGGCGGAAG+TGG 0.457883 8.1:+12734335 None:intergenic
AGCAAGATCAAAATCATTTG+TGG 0.461809 8.1:-12732925 MS.gene036828:CDS
TTCCGCCTCCTTAAGCGACT+TGG 0.472352 8.1:-12734331 MS.gene036828:CDS
GCAAGATCAAAATCATTTGT+GGG 0.479256 8.1:-12732924 MS.gene036828:CDS
TACCTGAATCAACCCGTAGC+TGG 0.485635 8.1:-12734531 MS.gene036828:CDS
CTAGTGACAAGAATAAGATT+AGG 0.493204 8.1:-12732536 MS.gene036828:CDS
GATAATGAAAAGCGCTTCCC+AGG 0.495751 8.1:+12734037 None:intergenic
CACTGAGGCAAACCAACTAC+AGG 0.497046 8.1:+12734265 None:intergenic
AGAAGAGGTGTATGTGGTGG+TGG 0.497776 8.1:+12734453 None:intergenic
AAGAAACGGAGACGGAGCTT+CGG 0.498607 8.1:+12734476 None:intergenic
AGCGCTTCCCAGGCTGGCGT+TGG 0.504146 8.1:+12734047 None:intergenic
TAATTATGAGTTTGAAGAGA+TGG 0.506598 8.1:-12732709 MS.gene036828:CDS
CAAGACAGAACTGGTTGCAT+GGG 0.507128 8.1:+12733065 None:intergenic
TTCCAAGTCGCTTAAGGAGG+CGG 0.508552 8.1:+12734329 None:intergenic
GGTAAGAAACAAGACAGAAC+TGG 0.508827 8.1:+12733056 None:intergenic
ATGAAAAGCGCTTCCCAGGC+TGG 0.509245 8.1:+12734041 None:intergenic
GAAAAGTCAAAGGTTGTTTG+AGG 0.510384 8.1:+12732751 None:intergenic
TCATAGCCTCCCATGCAACT+TGG 0.510555 8.1:+12734395 None:intergenic
CTTGTCGCCAACGCCAGCCT+GGG 0.511567 8.1:-12734054 MS.gene036828:CDS
TGGATGAGTAACCTCAGCTT+CGG 0.512390 8.1:-12734511 MS.gene036828:CDS
GAAGCTACAAAGAGCAGAGA+TGG 0.513111 8.1:-12734194 MS.gene036828:CDS
TTCCAACGCTAAGCCTCATA+AGG 0.515710 8.1:-12734422 MS.gene036828:CDS
CTCCTTAAGCGACTTGGAAG+CGG 0.516348 8.1:-12734325 MS.gene036828:CDS
ACAAGACAGAACTGGTTGCA+TGG 0.516518 8.1:+12733064 None:intergenic
TCAAAATCAGTATACAAAGT+AGG 0.517482 8.1:+12734133 None:intergenic
CTAATCTTATTCTTGTCACT+AGG 0.518832 8.1:+12732537 None:intergenic
ACTAGAGTATCTACACATGA+TGG 0.520536 8.1:-12733276 MS.gene036828:CDS
TTACTACTAACACCAATCCT+AGG 0.521295 8.1:+12732729 None:intergenic
TGAGGTTACTCATCCAGCTA+CGG 0.539825 8.1:+12734518 None:intergenic
GAGGTTACTCATCCAGCTAC+GGG 0.545283 8.1:+12734519 None:intergenic
ATGGAAGTGCAGTGGATTGG+TGG 0.547132 8.1:-12732857 MS.gene036828:CDS
GTATGTGGTGGTGGAAGAAA+CGG 0.548796 8.1:+12734462 None:intergenic
TTCAGGTACGGTGATGGAAG+AGG 0.559712 8.1:+12734546 None:intergenic
CGACTCGACCTTGGTCGAGC+CGG 0.560840 8.1:+12734365 None:intergenic
GGTCGAGTCCGACTCGACCT+TGG 0.560883 8.1:+12734356 None:intergenic
GGCAAACCAAGTTGCATGGG+AGG 0.562597 8.1:-12734401 MS.gene036828:CDS
CGCTTCCAAGTCGCTTAAGG+AGG 0.566941 8.1:+12734326 None:intergenic
TGCCTTATGAGGCTTAGCGT+TGG 0.567734 8.1:+12734420 None:intergenic
TGAGAATAATGAGAAAACAT+TGG 0.570745 8.1:-12732781 MS.gene036828:CDS
GGTTGATTCAGGTACGGTGA+TGG 0.577257 8.1:+12734540 None:intergenic
TAAGGCAAACCAAGTTGCAT+GGG 0.586093 8.1:-12734404 MS.gene036828:CDS
ATAAGGCAAACCAAGTTGCA+TGG 0.590080 8.1:-12734405 MS.gene036828:CDS
CGGAGACGGAGCTTCGGCGA+CGG 0.591780 8.1:+12734482 None:intergenic
GTTATATTAGGACAAGGTCA+TGG 0.596123 8.1:-12732876 MS.gene036828:CDS
TAGTACAGAAGAGGTGTATG+TGG 0.597102 8.1:+12734447 None:intergenic
TCTTGTCACTAGGAACCTCA+GGG 0.600591 8.1:+12732547 None:intergenic
CTAGAGTATCTACACATGAT+GGG 0.602972 8.1:-12733275 MS.gene036828:CDS
GTCATGGAAGTGCAGTGGAT+TGG 0.604377 8.1:-12732860 MS.gene036828:CDS
AGTCGACTCCGGCTCGACCA+AGG 0.606976 8.1:-12734373 MS.gene036828:CDS
ACAAAGAGCAGAGATGGAGA+AGG 0.609995 8.1:-12734188 MS.gene036828:CDS
TATGTAAGGTTTGGTGATGG+TGG 0.612123 8.1:+12734597 None:intergenic
GACGGCGGCTTCCGAAGCTG+AGG 0.616563 8.1:+12734500 None:intergenic
AGACGGAGCTTCGGCGACGG+CGG 0.619092 8.1:+12734485 None:intergenic
CGGCTCGACCAAGGTCGAGT+CGG 0.626857 8.1:-12734364 MS.gene036828:CDS
AAGACAGAACTGGTTGCATG+GGG 0.627836 8.1:+12733066 None:intergenic
ACAAGGTCATGGAAGTGCAG+TGG 0.630518 8.1:-12732865 MS.gene036828:CDS
AGGTTTGGTGATGGTGGCCA+TGG 0.631006 8.1:+12734603 None:intergenic
CAAGATCAAAATCATTTGTG+GGG 0.639484 8.1:-12732923 MS.gene036828:CDS
CAAGCATACAAATCACCACC+AGG 0.639865 8.1:+12734073 None:intergenic
CCAGAAGTTATATTAGGACA+AGG 0.641637 8.1:-12732882 MS.gene036828:CDS
CCAATCCTAGGAAAAGTCAA+AGG 0.642603 8.1:+12732741 None:intergenic
GCTACGGGTTGATTCAGGTA+CGG 0.644920 8.1:+12734534 None:intergenic
GTTGGAACCTAGTACAGAAG+AGG 0.654189 8.1:+12734438 None:intergenic
ATCTATGTAAGGTTTGGTGA+TGG 0.663222 8.1:+12734594 None:intergenic
GGGAGGCTATGAGTCGACTC+CGG 0.665447 8.1:-12734384 MS.gene036828:CDS
ACTGAGGCAAACCAACTACA+GGG 0.691651 8.1:+12734266 None:intergenic
GGTGGTGGAAGAAACGGAGA+CGG 0.694142 8.1:+12734468 None:intergenic
TTGTCACTAGGAACCTCAGG+GGG 0.705548 8.1:+12732549 None:intergenic
CTTGTCACTAGGAACCTCAG+GGG 0.731271 8.1:+12732548 None:intergenic
TACAGAAGAGGTGTATGTGG+TGG 0.741171 8.1:+12734450 None:intergenic
TTCATAGCATAGAAACACTG+AGG 0.749139 8.1:+12734250 None:intergenic
AGACAGAACTGGTTGCATGG+GGG 0.753672 8.1:+12733067 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAAACATAATTATAAA+AGG - chr8.1:12733536-12733555 MS.gene036828:intron 10.0%
!!! AAAATGACTTTTAATAATTA+TGG - chr8.1:12733638-12733657 MS.gene036828:intron 10.0%
!! AAAAAAAAAATGAACTTACT+TGG + chr8.1:12733050-12733069 None:intergenic 15.0%
!! ACTAGTAATAACTAATAATT+AGG - chr8.1:12733595-12733614 MS.gene036828:intron 15.0%
!!! TTTTTGTATGAAATGTTATA+TGG - chr8.1:12734234-12734253 MS.gene036828:CDS 15.0%
!!! AAAAGACATGAGTTTTTTAA+GGG - chr8.1:12734453-12734472 MS.gene036828:CDS 20.0%
!!! TAAAAGACATGAGTTTTTTA+AGG - chr8.1:12734452-12734471 MS.gene036828:CDS 20.0%
! AAAAAAATGAACTTACTTGG+AGG + chr8.1:12733047-12733066 None:intergenic 25.0%
! AAACCATATTAGAATCAAGT+AGG + chr8.1:12733371-12733390 None:intergenic 25.0%
! AACCATATTAGAATCAAGTA+GGG + chr8.1:12733370-12733389 None:intergenic 25.0%
! AAGAATCCAAATAAGAGAAT+TGG - chr8.1:12734405-12734424 MS.gene036828:CDS 25.0%
! AATGGAAAATATAGATATCC+TGG - chr8.1:12733315-12733334 MS.gene036828:intron 25.0%
! AATTGATGTTTAAGCTGAAA+TGG + chr8.1:12734591-12734610 None:intergenic 25.0%
! ACAATTTATGTCTTGTCATA+AGG - chr8.1:12733248-12733267 MS.gene036828:CDS 25.0%
! AGATCTTATAAGCAAATTGT+TGG - chr8.1:12734380-12734399 MS.gene036828:CDS 25.0%
! ATGAAGAATGAACATGTATA+AGG + chr8.1:12733080-12733099 None:intergenic 25.0%
! ATGGAAAATATAGATATCCT+GGG - chr8.1:12733316-12733335 MS.gene036828:intron 25.0%
! CTATCTTTCTTGCTTAATTT+AGG + chr8.1:12734561-12734580 None:intergenic 25.0%
! TAATTATGAGTTTGAAGAGA+TGG - chr8.1:12734347-12734366 MS.gene036828:CDS 25.0%
! TCAAAATCAGTATACAAAGT+AGG + chr8.1:12732926-12732945 None:intergenic 25.0%
! TCATTATTCTCACCTTTAAA+TGG + chr8.1:12734267-12734286 None:intergenic 25.0%
! TGAGAATAATGAGAAAACAT+TGG - chr8.1:12734275-12734294 MS.gene036828:CDS 25.0%
! TTCAATATCTATGTAAGGTT+TGG + chr8.1:12732471-12732490 None:intergenic 25.0%
!! AAAAAGCTTTGTACCTATTA+TGG + chr8.1:12733448-12733467 None:intergenic 25.0%
!! TAAGATTAGGAATAGAGTTT+TGG - chr8.1:12734533-12734552 MS.gene036828:CDS 25.0%
!! TACCTATTATGGTGTTAAAT+AGG + chr8.1:12733437-12733456 None:intergenic 25.0%
!!! AATGTTTTAGTAAGAGAAGA+TGG - chr8.1:12733832-12733851 MS.gene036828:intron 25.0%
!!! AGTTTTTTAAGGGTGTTAAT+TGG - chr8.1:12734463-12734482 MS.gene036828:CDS 25.0%
!!! GTTTTTTAAGGGTGTTAATT+GGG - chr8.1:12734464-12734483 MS.gene036828:CDS 25.0%
!!! TTCTTTTTCTTTGTTGATGA+TGG + chr8.1:12734024-12734043 None:intergenic 25.0%
AAATGTTCAAGAAGAGTTTG+AGG - chr8.1:12734071-12734090 MS.gene036828:CDS 30.0%
AAGAGAATTGGAAGTTGTTT+GGG - chr8.1:12734417-12734436 MS.gene036828:CDS 30.0%
AGCAAGATCAAAATCATTTG+TGG - chr8.1:12734131-12734150 MS.gene036828:CDS 30.0%
CAACTTCCAATTCTCTTATT+TGG + chr8.1:12734414-12734433 None:intergenic 30.0%
CAAGATCAAAATCATTTGTG+GGG - chr8.1:12734133-12734152 MS.gene036828:CDS 30.0%
CACTCATTTGAAAACAACAT+AGG + chr8.1:12733289-12733308 None:intergenic 30.0%
CTAATCTTATTCTTGTCACT+AGG + chr8.1:12734522-12734541 None:intergenic 30.0%
CTAGTGACAAGAATAAGATT+AGG - chr8.1:12734520-12734539 MS.gene036828:CDS 30.0%
GACCTATTTAACACCATAAT+AGG - chr8.1:12733432-12733451 MS.gene036828:intron 30.0%
GATATTAACCAATTACGAAC+AGG - chr8.1:12733731-12733750 MS.gene036828:intron 30.0%
GCAAGATCAAAATCATTTGT+GGG - chr8.1:12734132-12734151 MS.gene036828:CDS 30.0%
GTATACAAAGTAGGCAAAAA+AGG + chr8.1:12732917-12732936 None:intergenic 30.0%
TAAGAGAATTGGAAGTTGTT+TGG - chr8.1:12734416-12734435 MS.gene036828:CDS 30.0%
TATGGAAGAACACCATTTAA+AGG - chr8.1:12734252-12734271 MS.gene036828:CDS 30.0%
TCAGGTTCAATATCTATGTA+AGG + chr8.1:12732476-12732495 None:intergenic 30.0%
TCTCTTACTAAAACATTCTC+TGG + chr8.1:12733829-12733848 None:intergenic 30.0%
TTAGCACCAGAAGTTATATT+AGG - chr8.1:12734168-12734187 MS.gene036828:CDS 30.0%
TTCAAATGAGTGTTTGTGAA+TGG - chr8.1:12733297-12733316 MS.gene036828:CDS 30.0%
! CTATTTATATTAGAGAGCGT+AGG - chr8.1:12733211-12733230 MS.gene036828:CDS 30.0%
! TCATTACTCTTGTTTGGTTA+TGG - chr8.1:12732952-12732971 MS.gene036828:CDS 30.0%
!! GATTTTGATCTTGCTTCAAT+TGG + chr8.1:12734126-12734145 None:intergenic 30.0%
ATACAAGAGACAAAAATCCC+AGG + chr8.1:12733336-12733355 None:intergenic 35.0%
CCAGAAGTTATATTAGGACA+AGG - chr8.1:12734174-12734193 MS.gene036828:CDS 35.0%
CCTTGTCCTAATATAACTTC+TGG + chr8.1:12734177-12734196 None:intergenic 35.0%
GAAAAGTCAAAGGTTGTTTG+AGG + chr8.1:12734308-12734327 None:intergenic 35.0%
GCATAAAACCTGTTCGTAAT+TGG + chr8.1:12733742-12733761 None:intergenic 35.0%
GTTATATTAGGACAAGGTCA+TGG - chr8.1:12734180-12734199 MS.gene036828:CDS 35.0%
TGCTTCTCATTACTCTTGTT+TGG - chr8.1:12732946-12732965 MS.gene036828:CDS 35.0%
TGTCTCTTGTATGGTTCATA+AGG - chr8.1:12733344-12733363 MS.gene036828:intron 35.0%
TTACTACTAACACCAATCCT+AGG + chr8.1:12734330-12734349 None:intergenic 35.0%
TTATGCAGCTGAAACACTAT+TGG - chr8.1:12733756-12733775 MS.gene036828:intron 35.0%
TTCATAGCATAGAAACACTG+AGG + chr8.1:12732809-12732828 None:intergenic 35.0%
! ACTAGAGTATCTACACATGA+TGG - chr8.1:12733780-12733799 MS.gene036828:intron 35.0%
! ATTGGTTCAGCTACAAAATC+AGG + chr8.1:12734108-12734127 None:intergenic 35.0%
! CTAGAGTATCTACACATGAT+GGG - chr8.1:12733781-12733800 MS.gene036828:intron 35.0%
! GTTTTGCTTCTTAAGAGCTT+TGG + chr8.1:12733907-12733926 None:intergenic 35.0%
! TGGGATTTTTGTCTCTTGTA+TGG - chr8.1:12733335-12733354 MS.gene036828:intron 35.0%
!! AACAACCTTTGACTTTTCCT+AGG - chr8.1:12734310-12734329 MS.gene036828:CDS 35.0%
!! ATAGAGAAGCACTTGCTATA+AGG - chr8.1:12732837-12732856 MS.gene036828:CDS 35.0%
!! ATCTATGTAAGGTTTGGTGA+TGG + chr8.1:12732465-12732484 None:intergenic 35.0%
ACATACACCTCTTCTGTACT+AGG - chr8.1:12732611-12732630 MS.gene036828:CDS 40.0%
ATAAGGCAAACCAAGTTGCA+TGG - chr8.1:12732651-12732670 MS.gene036828:CDS 40.0%
CAGATAAGAAACCCTGTAGT+TGG - chr8.1:12732779-12732798 MS.gene036828:CDS 40.0%
CCAATCCTAGGAAAAGTCAA+AGG + chr8.1:12734318-12734337 None:intergenic 40.0%
GGCCCTACTTGATTCTAATA+TGG - chr8.1:12733365-12733384 MS.gene036828:intron 40.0%
GGTAAGAAACAAGACAGAAC+TGG + chr8.1:12734003-12734022 None:intergenic 40.0%
TAAGGCAAACCAAGTTGCAT+GGG - chr8.1:12732652-12732671 MS.gene036828:CDS 40.0%
! AGAGATGGAGAAGGAGATTT+TGG - chr8.1:12732877-12732896 MS.gene036828:CDS 40.0%
! AGATGGAGAAGGAGATTTTG+GGG - chr8.1:12732879-12732898 MS.gene036828:CDS 40.0%
! GAGATGGAGAAGGAGATTTT+GGG - chr8.1:12732878-12732897 MS.gene036828:CDS 40.0%
! TAGTACAGAAGAGGTGTATG+TGG + chr8.1:12732612-12732631 None:intergenic 40.0%
!! CCTTTGACTTTTCCTAGGAT+TGG - chr8.1:12734315-12734334 MS.gene036828:CDS 40.0%
!! TATGTAAGGTTTGGTGATGG+TGG + chr8.1:12732462-12732481 None:intergenic 40.0%
!! TTGGTTATGGAGTTTTGTCC+TGG - chr8.1:12732965-12732984 MS.gene036828:CDS 40.0%
AAGACAGAACTGGTTGCATG+GGG + chr8.1:12733993-12734012 None:intergenic 45.0%
ACAAAGAGCAGAGATGGAGA+AGG - chr8.1:12732868-12732887 MS.gene036828:CDS 45.0%
ACAAGACAGAACTGGTTGCA+TGG + chr8.1:12733995-12734014 None:intergenic 45.0%
ACTGAGGCAAACCAACTACA+GGG + chr8.1:12732793-12732812 None:intergenic 45.0%
CAAGACAGAACTGGTTGCAT+GGG + chr8.1:12733994-12734013 None:intergenic 45.0%
CAAGCATACAAATCACCACC+AGG + chr8.1:12732986-12733005 None:intergenic 45.0%
GAAGCTACAAAGAGCAGAGA+TGG - chr8.1:12732862-12732881 MS.gene036828:CDS 45.0%
GTTGGAACCTAGTACAGAAG+AGG + chr8.1:12732621-12732640 None:intergenic 45.0%
TCTTGTCACTAGGAACCTCA+GGG + chr8.1:12734512-12734531 None:intergenic 45.0%
TGAGGTTACTCATCCAGCTA+CGG + chr8.1:12732541-12732560 None:intergenic 45.0%
TGGATGAGTAACCTCAGCTT+CGG - chr8.1:12732545-12732564 MS.gene036828:CDS 45.0%
TTCCAACGCTAAGCCTCATA+AGG - chr8.1:12732634-12732653 MS.gene036828:CDS 45.0%
TTCTTGTCACTAGGAACCTC+AGG + chr8.1:12734513-12734532 None:intergenic 45.0%
! TACAGAAGAGGTGTATGTGG+TGG + chr8.1:12732609-12732628 None:intergenic 45.0%
!! GATAATGAAAAGCGCTTCCC+AGG + chr8.1:12733022-12733041 None:intergenic 45.0%
!! GCAACTTGGTTTGCCTTATG+AGG + chr8.1:12732650-12732669 None:intergenic 45.0%
!! GTATGTGGTGGTGGAAGAAA+CGG + chr8.1:12732597-12732616 None:intergenic 45.0%
!! GTTATGGAGTTTTGTCCTGG+TGG - chr8.1:12732968-12732987 MS.gene036828:CDS 45.0%
!! AAAAAAAACATAATTATAAA+AGG + chr8.1:12733562-12733581 None:intergenic 5.0%
!!! TAATTATGTTTTTTTTTTTA+TGG - chr8.1:12733566-12733585 MS.gene036828:intron 5.0%
AAGAAACGGAGACGGAGCTT+CGG + chr8.1:12732583-12732602 None:intergenic 50.0%
AGACAGAACTGGTTGCATGG+GGG + chr8.1:12733992-12734011 None:intergenic 50.0%
CACTGAGGCAAACCAACTAC+AGG + chr8.1:12732794-12732813 None:intergenic 50.0%
CTTGTCACTAGGAACCTCAG+GGG + chr8.1:12734511-12734530 None:intergenic 50.0%
GACTTGGAAGCGGCGATATA+GGG - chr8.1:12732741-12732760 MS.gene036828:CDS 50.0%
GAGGTTACTCATCCAGCTAC+GGG + chr8.1:12732540-12732559 None:intergenic 50.0%
TACCTGAATCAACCCGTAGC+TGG - chr8.1:12732525-12732544 MS.gene036828:CDS 50.0%
TAGATCAGTTAGACCCCCTG+AGG - chr8.1:12734494-12734513 MS.gene036828:CDS 50.0%
TCATAGCCTCCCATGCAACT+TGG + chr8.1:12732664-12732683 None:intergenic 50.0%
TGCATGGGGGAAATGCAAGA+AGG + chr8.1:12733979-12733998 None:intergenic 50.0%
TGCCTTATGAGGCTTAGCGT+TGG + chr8.1:12732639-12732658 None:intergenic 50.0%
TTCCAAGTCGCTTAAGGAGG+CGG + chr8.1:12732730-12732749 None:intergenic 50.0%
TTGTCACTAGGAACCTCAGG+GGG + chr8.1:12734510-12734529 None:intergenic 50.0%
! ACAAGGTCATGGAAGTGCAG+TGG - chr8.1:12734191-12734210 MS.gene036828:CDS 50.0%
! AGAAGAGGTGTATGTGGTGG+TGG + chr8.1:12732606-12732625 None:intergenic 50.0%
! CTCCTTAAGCGACTTGGAAG+CGG - chr8.1:12732731-12732750 MS.gene036828:CDS 50.0%
! GGTTGATTCAGGTACGGTGA+TGG + chr8.1:12732519-12732538 None:intergenic 50.0%
! GTCATGGAAGTGCAGTGGAT+TGG - chr8.1:12734196-12734215 MS.gene036828:CDS 50.0%
!! ATCCAGCTACGGGTTGATTC+AGG + chr8.1:12732530-12732549 None:intergenic 50.0%
!! ATGGAAGTGCAGTGGATTGG+TGG - chr8.1:12734199-12734218 MS.gene036828:CDS 50.0%
!! GCAGTGGATTGGTGGACATT+TGG - chr8.1:12734207-12734226 MS.gene036828:CDS 50.0%
!! GCTACGGGTTGATTCAGGTA+CGG + chr8.1:12732525-12732544 None:intergenic 50.0%
!! TTCAGGTACGGTGATGGAAG+AGG + chr8.1:12732513-12732532 None:intergenic 50.0%
CGCTTCCAAGTCGCTTAAGG+AGG + chr8.1:12732733-12732752 None:intergenic 55.0%
GGCAAACCAAGTTGCATGGG+AGG - chr8.1:12732655-12732674 MS.gene036828:CDS 55.0%
TTCCGCCTCCTTAAGCGACT+TGG - chr8.1:12732725-12732744 MS.gene036828:CDS 55.0%
! CGACTTGGAAGCGGCGATAT+AGG - chr8.1:12732740-12732759 MS.gene036828:CDS 55.0%
!! ATGAAAAGCGCTTCCCAGGC+TGG + chr8.1:12733018-12733037 None:intergenic 55.0%
!! GGTGGTGGAAGAAACGGAGA+CGG + chr8.1:12732591-12732610 None:intergenic 55.0%
CGCCGCTTCCAAGTCGCTTA+AGG + chr8.1:12732736-12732755 None:intergenic 60.0%
GAGGAGCTGCTGTCGTAGTC+AGG + chr8.1:12732494-12732513 None:intergenic 60.0%
GTCGCTTAAGGAGGCGGAAG+TGG + chr8.1:12732724-12732743 None:intergenic 60.0%
! GGGAGGCTATGAGTCGACTC+CGG - chr8.1:12732672-12732691 MS.gene036828:CDS 60.0%
CGACTCGACCTTGGTCGAGC+CGG + chr8.1:12732694-12732713 None:intergenic 65.0%
CGGCTCGACCAAGGTCGAGT+CGG - chr8.1:12732692-12732711 MS.gene036828:CDS 65.0%
CTTGTCGCCAACGCCAGCCT+GGG - chr8.1:12733002-12733021 MS.gene036828:CDS 65.0%
! AGTCGACTCCGGCTCGACCA+AGG - chr8.1:12732683-12732702 MS.gene036828:CDS 65.0%
! GGTCGAGTCCGACTCGACCT+TGG + chr8.1:12732703-12732722 None:intergenic 65.0%
AGACGGAGCTTCGGCGACGG+CGG + chr8.1:12732574-12732593 None:intergenic 70.0%
AGCGCTTCCCAGGCTGGCGT+TGG + chr8.1:12733012-12733031 None:intergenic 70.0%
CGGAGACGGAGCTTCGGCGA+CGG + chr8.1:12732577-12732596 None:intergenic 70.0%
GACGGCGGCTTCCGAAGCTG+AGG + chr8.1:12732559-12732578 None:intergenic 70.0%
GCTTGTCGCCAACGCCAGCC+TGG - chr8.1:12733001-12733020 MS.gene036828:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 12732455 12734623 12732455 ID=MS.gene036828
chr8.1 mRNA 12732455 12734623 12732455 ID=MS.gene036828.t1;Parent=MS.gene036828
chr8.1 exon 12734028 12734623 12734028 ID=MS.gene036828.t1.exon1;Parent=MS.gene036828.t1
chr8.1 CDS 12734028 12734623 12734028 ID=cds.MS.gene036828.t1;Parent=MS.gene036828.t1
chr8.1 exon 12732455 12733325 12732455 ID=MS.gene036828.t1.exon2;Parent=MS.gene036828.t1
chr8.1 CDS 12732455 12733325 12732455 ID=cds.MS.gene036828.t1;Parent=MS.gene036828.t1
Gene Sequence

>MS.gene036828

ATGGCCACCATCACCAAACCTTACATAGATATTGAACCTGACTACGACAGCAGCTCCTCTTCCATCACCGTACCTGAATCAACCCGTAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCGTCGCCGAAGCTCCGTCTCCGTTTCTTCCACCACCACATACACCTCTTCTGTACTAGGTTCCAACGCTAAGCCTCATAAGGCAAACCAAGTTGCATGGGAGGCTATGAGTCGACTCCGGCTCGACCAAGGTCGAGTCGGACTCGACCACTTCCGCCTCCTTAAGCGACTTGGAAGCGGCGATATAGGGAATGTTTATCTTTGTCAGATAAGAAACCCTGTAGTTGGTTTGCCTCAGTGTTTCTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGCTACAAAGAGCAGAGATGGAGAAGGAGATTTTGGGGATGCTTGATCATCCTTTTTTGCCTACTTTGTATACTGATTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTGTCGCCAACGCCAGCCTGGGAAGCGCTTTTCATTATCATCCTCCAAGTAAGTTCATTTTTTTTTTACTCAAACCTTATACATGTTCATTCTTCATATAAATTATAATCACTTCTTATAAAAAAGCTTATATAAATTATTTATGTAGTAAAAGATAAAAGAAAGTAAAGTTTTTTCTTCATATAATCTATAAACTGTTTTTCATACACTATTTATATTAGAGAGCGTAGGAAAATAAAATAAAAACAATTTATGTCTTGTCATAAGGACTCTCAAATAGTTTCCTATGTTGTTTTCAAATGAGTGTTTGTGAATGGAAAATATAGATATCCTGGGATTTTTGTCTCTTGTATGGTTCATAAGGCCCTACTTGATTCTAATATGGTTTCTCTTGATAGACATAATTTATGTAGTAGTGCTTAATCTTTTGACCTATTTAACACCATAATAGGTACAAAGCTTTTTTTTTTCTTTTCAATTTTTTTGATGTTCTTGCATTAATTCTTTGAGCTCTAATTTGAACTCATAATTTATGAAAAAACATAATTATAAAAGGCCTTTTATAATTATGTTTTTTTTTTTATGGTTGTAAACTAGTAATAACTAATAATTAGGTTTGTAATTAGCTTTGAATGAAAATGACTTTTAATAATTATGGTTGTAAACTATAATTAGTAATAATTAGTTTGATTATTAATATATTAAAATAATTATTATAATTATATGAAGATATTAACCAATTACGAACAGGTTTTATGCAGCTGAAACACTATTGGCACTAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTTTCAGATTTTGATCTTTCACTCAAATGTGACGTTGTTCCAAAGCTCTTAAGAAGCAAAACAAGATTAGAACGAAGTATCAAAACAACTACTACAATGAGATGTTCAACACCTTCTTGCATTTCCCCCATGCAACCAGTTCTGTCTTGTTTCTTACCATCATCAACAAAGAAAAAGAAAACTAAACTTGAAACTGTTATTAGAGAAAATGTTCAAGAAGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGAAGCAAGATCAAAATCATTTGTGGGGACACATGAATATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTATGAAATGTTATATGGAAGAACACCATTTAAAGGTGAGAATAATGAGAAAACATTGGTTAATATCCTCAAACAACCTTTGACTTTTCCTAGGATTGGTGTTAGTAGTAATTATGAGTTTGAAGAGATGGTGAAAGTTCAAGATCTTATAAGCAAATTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTTAAGGGTGTTAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTTCCTAGTGACAAGAATAAGATTAGGAATAGAGTTTTGGTGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAGCTTAAACATCAATTTGATTACTTCTAA
Protein sequence

>MS.gene036828.t1

MATITKPYIDIEPDYDSSSSSITVPESTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSVLGSNAKPHKANQVAWEAMSRLRLDQGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTDFDASHYSCLVMEFCPGGDLYACRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKTTTTMRCSTPSCISPMQPVLSCFLPSSTKKKKTKLETVIRENVQEEFEVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSNYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKIRNRVLVPKLSKKDRDQPFQLKHQFDYF