Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036866.t1 | XP_003609208.1 | 94.9 | 434 | 22 | 0 | 1 | 434 | 1 | 434 | 9.70E-214 | 752.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036866.t1 | Q9ZQ85 | 54.7 | 344 | 118 | 13 | 1 | 326 | 1 | 324 | 1.2e-76 | 288.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036866.t1 | G7JU63 | 94.9 | 434 | 22 | 0 | 1 | 434 | 1 | 434 | 7.0e-214 | 752.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene036866.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036866.t1 | MTR_4g113140 | 98.157 | 434 | 8 | 0 | 1 | 434 | 1 | 434 | 0.0 | 887 |
MS.gene036866.t1 | MTR_4g086835 | 38.649 | 370 | 171 | 12 | 4 | 328 | 6 | 364 | 2.40e-61 | 205 |
MS.gene036866.t1 | MTR_4g086835 | 38.649 | 370 | 170 | 13 | 4 | 328 | 6 | 363 | 1.20e-59 | 200 |
MS.gene036866.t1 | MTR_5g054300 | 40.469 | 341 | 140 | 16 | 30 | 350 | 12 | 309 | 1.29e-51 | 177 |
MS.gene036866.t1 | MTR_1g093080 | 35.714 | 336 | 151 | 8 | 29 | 328 | 2 | 308 | 1.84e-50 | 175 |
MS.gene036866.t1 | MTR_1g093080 | 34.256 | 289 | 129 | 6 | 29 | 285 | 2 | 261 | 5.72e-39 | 142 |
MS.gene036866.t1 | MTR_5g017980 | 34.539 | 304 | 146 | 8 | 6 | 305 | 10 | 264 | 1.49e-37 | 139 |
MS.gene036866.t1 | MTR_5g017980 | 34.539 | 304 | 145 | 9 | 6 | 305 | 10 | 263 | 5.69e-36 | 135 |
MS.gene036866.t1 | MTR_5g017980 | 34.211 | 304 | 145 | 8 | 6 | 305 | 10 | 262 | 2.15e-35 | 133 |
MS.gene036866.t1 | MTR_1g093080 | 29.924 | 264 | 120 | 8 | 29 | 258 | 2 | 234 | 2.24e-22 | 96.3 |
MS.gene036866.t1 | MTR_1g080330 | 50.000 | 82 | 39 | 1 | 226 | 307 | 166 | 245 | 2.21e-15 | 76.6 |
MS.gene036866.t1 | MTR_1g080330 | 48.235 | 85 | 42 | 1 | 226 | 310 | 166 | 248 | 4.24e-15 | 77.0 |
MS.gene036866.t1 | MTR_7g098250 | 47.727 | 88 | 44 | 1 | 226 | 313 | 253 | 338 | 8.72e-15 | 76.6 |
MS.gene036866.t1 | MTR_2g450070 | 37.383 | 107 | 59 | 3 | 232 | 331 | 210 | 315 | 1.11e-14 | 76.6 |
MS.gene036866.t1 | MTR_2g450070 | 37.383 | 107 | 59 | 3 | 232 | 331 | 210 | 315 | 1.27e-14 | 76.6 |
MS.gene036866.t1 | MTR_1g053830 | 44.286 | 70 | 39 | 0 | 228 | 297 | 11 | 80 | 1.34e-14 | 69.7 |
MS.gene036866.t1 | MTR_4g131580 | 49.296 | 71 | 35 | 1 | 232 | 302 | 197 | 266 | 4.74e-14 | 74.7 |
MS.gene036866.t1 | MTR_7g089010 | 52.381 | 63 | 29 | 1 | 231 | 293 | 87 | 148 | 1.75e-13 | 71.2 |
MS.gene036866.t1 | MTR_1g053835 | 43.478 | 92 | 47 | 1 | 211 | 297 | 229 | 320 | 1.99e-13 | 72.0 |
MS.gene036866.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 3.36e-13 | 70.5 |
MS.gene036866.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 5.92e-13 | 70.1 |
MS.gene036866.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 108 | 174 | 6.37e-13 | 70.9 |
MS.gene036866.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 212 | 278 | 6.52e-13 | 71.2 |
MS.gene036866.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 212 | 278 | 6.76e-13 | 71.2 |
MS.gene036866.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 8.22e-13 | 69.7 |
MS.gene036866.t1 | MTR_1g013170 | 54.839 | 62 | 27 | 1 | 234 | 295 | 190 | 250 | 8.29e-13 | 70.5 |
MS.gene036866.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 1.06e-12 | 70.1 |
MS.gene036866.t1 | MTR_5g014040 | 52.308 | 65 | 29 | 2 | 230 | 293 | 305 | 368 | 1.46e-12 | 69.7 |
MS.gene036866.t1 | MTR_4g064730 | 40.404 | 99 | 52 | 3 | 218 | 316 | 119 | 210 | 1.47e-12 | 68.6 |
MS.gene036866.t1 | MTR_2g023580 | 61.538 | 52 | 20 | 0 | 237 | 288 | 57 | 108 | 1.70e-12 | 67.4 |
MS.gene036866.t1 | MTR_5g041350 | 53.448 | 58 | 27 | 0 | 232 | 289 | 12 | 69 | 1.72e-12 | 68.9 |
MS.gene036866.t1 | MTR_2g086450 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 3.03e-12 | 68.2 |
MS.gene036866.t1 | MTR_7g088070 | 52.239 | 67 | 31 | 1 | 235 | 300 | 50 | 116 | 3.05e-12 | 67.0 |
MS.gene036866.t1 | MTR_2g034960 | 43.333 | 90 | 44 | 2 | 232 | 315 | 208 | 296 | 3.31e-12 | 68.9 |
MS.gene036866.t1 | MTR_4g131570 | 46.479 | 71 | 37 | 1 | 232 | 302 | 200 | 269 | 4.69e-12 | 68.2 |
MS.gene036866.t1 | MTR_7g088070 | 55.000 | 60 | 27 | 0 | 235 | 294 | 50 | 109 | 5.77e-12 | 66.2 |
MS.gene036866.t1 | MTR_6g032990 | 44.444 | 81 | 40 | 2 | 232 | 308 | 39 | 118 | 5.83e-12 | 67.4 |
MS.gene036866.t1 | MTR_0223s0040 | 61.224 | 49 | 19 | 0 | 240 | 288 | 23 | 71 | 7.78e-12 | 66.2 |
MS.gene036866.t1 | MTR_2g027860 | 50.746 | 67 | 33 | 0 | 235 | 301 | 49 | 115 | 9.67e-12 | 66.2 |
MS.gene036866.t1 | MTR_1g032570 | 46.753 | 77 | 38 | 2 | 227 | 301 | 192 | 267 | 1.08e-11 | 67.4 |
MS.gene036866.t1 | MTR_1g032570 | 46.753 | 77 | 38 | 2 | 227 | 301 | 123 | 198 | 1.17e-11 | 67.0 |
MS.gene036866.t1 | MTR_1g112370 | 59.184 | 49 | 20 | 0 | 240 | 288 | 27 | 75 | 1.30e-11 | 65.9 |
MS.gene036866.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 309 | 374 | 1.40e-11 | 66.6 |
MS.gene036866.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 329 | 394 | 1.46e-11 | 66.6 |
MS.gene036866.t1 | MTR_3g064840 | 46.479 | 71 | 38 | 0 | 231 | 301 | 270 | 340 | 1.52e-11 | 66.2 |
MS.gene036866.t1 | MTR_5g027440 | 54.098 | 61 | 26 | 1 | 235 | 293 | 25 | 85 | 1.55e-11 | 65.1 |
MS.gene036866.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 309 | 374 | 1.66e-11 | 66.6 |
MS.gene036866.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 329 | 394 | 1.68e-11 | 66.6 |
MS.gene036866.t1 | MTR_8g066310 | 46.575 | 73 | 39 | 0 | 229 | 301 | 167 | 239 | 1.82e-11 | 65.5 |
MS.gene036866.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 348 | 413 | 1.82e-11 | 66.6 |
MS.gene036866.t1 | MTR_4g078810 | 48.387 | 62 | 31 | 1 | 231 | 292 | 154 | 214 | 2.03e-11 | 65.9 |
MS.gene036866.t1 | MTR_7g069660 | 57.143 | 49 | 21 | 0 | 240 | 288 | 76 | 124 | 2.33e-11 | 65.5 |
MS.gene036866.t1 | MTR_6g071625 | 49.231 | 65 | 33 | 0 | 234 | 298 | 201 | 265 | 2.39e-11 | 65.5 |
MS.gene036866.t1 | MTR_1g090670 | 58.182 | 55 | 23 | 0 | 235 | 289 | 44 | 98 | 2.45e-11 | 64.7 |
MS.gene036866.t1 | MTR_2g027800 | 58.182 | 55 | 23 | 0 | 235 | 289 | 39 | 93 | 3.13e-11 | 64.3 |
MS.gene036866.t1 | MTR_3g106220 | 46.377 | 69 | 36 | 1 | 234 | 302 | 197 | 264 | 3.53e-11 | 65.5 |
MS.gene036866.t1 | MTR_2g027800 | 58.182 | 55 | 23 | 0 | 235 | 289 | 39 | 93 | 3.89e-11 | 64.3 |
MS.gene036866.t1 | MTR_7g093030 | 50.847 | 59 | 29 | 0 | 230 | 288 | 207 | 265 | 4.29e-11 | 63.9 |
MS.gene036866.t1 | MTR_4g021790 | 45.588 | 68 | 36 | 1 | 234 | 301 | 167 | 233 | 4.52e-11 | 63.5 |
MS.gene036866.t1 | MTR_8g079940 | 53.333 | 60 | 27 | 1 | 234 | 293 | 208 | 266 | 4.81e-11 | 65.1 |
MS.gene036866.t1 | MTR_1g021520 | 38.095 | 105 | 60 | 1 | 227 | 331 | 118 | 217 | 4.82e-11 | 63.9 |
MS.gene036866.t1 | MTR_7g115530 | 59.615 | 52 | 21 | 0 | 235 | 286 | 218 | 269 | 6.37e-11 | 63.2 |
MS.gene036866.t1 | MTR_7g117705 | 52.542 | 59 | 27 | 1 | 234 | 292 | 190 | 247 | 8.66e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036866.t1 | AT2G03500 | 50.959 | 469 | 158 | 20 | 1 | 434 | 1 | 432 | 4.48e-118 | 352 |
MS.gene036866.t1 | AT1G68670 | 37.535 | 357 | 157 | 12 | 32 | 351 | 13 | 340 | 3.77e-61 | 202 |
MS.gene036866.t1 | AT1G25550 | 39.394 | 330 | 132 | 13 | 18 | 316 | 2 | 294 | 4.65e-55 | 186 |
MS.gene036866.t1 | AT3G25790 | 33.333 | 357 | 141 | 8 | 19 | 333 | 1 | 302 | 7.68e-45 | 160 |
MS.gene036866.t1 | AT1G25550 | 37.966 | 295 | 119 | 11 | 18 | 285 | 2 | 259 | 8.15e-43 | 152 |
MS.gene036866.t1 | AT4G37180 | 35.473 | 296 | 139 | 8 | 7 | 293 | 16 | 268 | 2.46e-39 | 145 |
MS.gene036866.t1 | AT4G37180 | 34.797 | 296 | 148 | 8 | 7 | 293 | 16 | 275 | 5.08e-37 | 139 |
MS.gene036866.t1 | AT4G37180 | 34.722 | 288 | 136 | 8 | 7 | 285 | 16 | 260 | 1.01e-34 | 130 |
MS.gene036866.t1 | AT1G13300 | 71.765 | 85 | 22 | 1 | 234 | 316 | 180 | 264 | 6.72e-34 | 130 |
MS.gene036866.t1 | AT1G49560 | 64.706 | 85 | 25 | 2 | 231 | 314 | 188 | 268 | 1.22e-27 | 112 |
MS.gene036866.t1 | AT3G25790 | 49.533 | 107 | 52 | 1 | 181 | 285 | 140 | 246 | 1.28e-20 | 91.3 |
MS.gene036866.t1 | AT3G25790 | 28.409 | 176 | 76 | 6 | 19 | 146 | 1 | 174 | 3.82e-11 | 63.5 |
MS.gene036866.t1 | AT1G49560 | 76.364 | 55 | 13 | 0 | 231 | 285 | 188 | 242 | 1.56e-20 | 91.3 |
MS.gene036866.t1 | AT4G28610 | 53.333 | 90 | 41 | 1 | 224 | 313 | 214 | 302 | 8.30e-19 | 88.6 |
MS.gene036866.t1 | AT5G05090 | 34.932 | 146 | 75 | 4 | 224 | 366 | 70 | 198 | 9.13e-16 | 77.4 |
MS.gene036866.t1 | AT2G20400 | 51.899 | 79 | 37 | 1 | 235 | 313 | 231 | 308 | 2.16e-14 | 75.1 |
MS.gene036866.t1 | AT2G20400 | 51.899 | 79 | 36 | 1 | 235 | 313 | 231 | 307 | 3.36e-14 | 74.3 |
MS.gene036866.t1 | AT3G46640 | 41.489 | 94 | 53 | 2 | 225 | 318 | 134 | 225 | 6.03e-14 | 72.8 |
MS.gene036866.t1 | AT3G46640 | 41.489 | 94 | 53 | 2 | 225 | 318 | 134 | 225 | 6.03e-14 | 72.8 |
MS.gene036866.t1 | AT2G40970 | 35.200 | 125 | 66 | 2 | 231 | 355 | 101 | 210 | 6.72e-14 | 71.6 |
MS.gene036866.t1 | AT3G46640 | 34.507 | 142 | 65 | 3 | 203 | 318 | 86 | 225 | 7.73e-14 | 72.8 |
MS.gene036866.t1 | AT3G10760 | 52.381 | 63 | 29 | 1 | 231 | 293 | 101 | 162 | 9.81e-14 | 72.4 |
MS.gene036866.t1 | AT5G59570 | 49.231 | 65 | 32 | 1 | 229 | 293 | 135 | 198 | 1.82e-13 | 71.2 |
MS.gene036866.t1 | AT5G59570 | 49.231 | 65 | 32 | 1 | 229 | 293 | 135 | 198 | 1.82e-13 | 71.2 |
MS.gene036866.t1 | AT2G20570 | 36.486 | 148 | 62 | 5 | 163 | 292 | 76 | 209 | 3.84e-13 | 71.2 |
MS.gene036866.t1 | AT2G06020 | 58.182 | 55 | 23 | 0 | 235 | 289 | 86 | 140 | 6.97e-13 | 69.3 |
MS.gene036866.t1 | AT3G04030 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 1.57e-12 | 69.3 |
MS.gene036866.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 211 | 299 | 1.60e-12 | 69.3 |
MS.gene036866.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 168 | 256 | 1.72e-12 | 68.9 |
MS.gene036866.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 168 | 256 | 1.72e-12 | 68.9 |
MS.gene036866.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 1.81e-12 | 68.9 |
MS.gene036866.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 1.81e-12 | 68.9 |
MS.gene036866.t1 | AT3G04030 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 1.83e-12 | 68.9 |
MS.gene036866.t1 | AT2G02060 | 57.692 | 52 | 22 | 0 | 237 | 288 | 31 | 82 | 2.01e-12 | 67.4 |
MS.gene036866.t1 | AT2G02060 | 57.692 | 52 | 22 | 0 | 237 | 288 | 31 | 82 | 2.01e-12 | 67.4 |
MS.gene036866.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.07e-12 | 68.9 |
MS.gene036866.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.12e-12 | 68.9 |
MS.gene036866.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.12e-12 | 68.9 |
MS.gene036866.t1 | AT5G58080 | 50.000 | 62 | 30 | 1 | 232 | 293 | 191 | 251 | 2.97e-12 | 68.9 |
MS.gene036866.t1 | AT2G38300 | 55.769 | 52 | 23 | 0 | 237 | 288 | 56 | 107 | 3.83e-12 | 67.8 |
MS.gene036866.t1 | AT5G29000 | 43.678 | 87 | 47 | 1 | 217 | 301 | 211 | 297 | 4.80e-12 | 67.0 |
MS.gene036866.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene036866.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene036866.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene036866.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 134 | 197 | 6.05e-12 | 67.0 |
MS.gene036866.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 227 | 290 | 9.60e-12 | 67.0 |
MS.gene036866.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 199 | 262 | 9.92e-12 | 66.6 |
MS.gene036866.t1 | AT2G01060 | 49.296 | 71 | 35 | 1 | 230 | 299 | 9 | 79 | 1.09e-11 | 65.9 |
MS.gene036866.t1 | AT5G45580 | 56.364 | 55 | 24 | 0 | 235 | 289 | 7 | 61 | 1.20e-11 | 65.5 |
MS.gene036866.t1 | AT5G45580 | 56.364 | 55 | 24 | 0 | 235 | 289 | 23 | 77 | 1.42e-11 | 65.5 |
MS.gene036866.t1 | AT1G14600 | 55.769 | 52 | 23 | 0 | 237 | 288 | 25 | 76 | 1.80e-11 | 64.7 |
MS.gene036866.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 166 | 224 | 1.88e-11 | 66.6 |
MS.gene036866.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 236 | 294 | 2.39e-11 | 66.2 |
MS.gene036866.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 236 | 294 | 2.47e-11 | 66.2 |
MS.gene036866.t1 | AT3G04450 | 51.667 | 60 | 29 | 0 | 235 | 294 | 238 | 297 | 2.49e-11 | 65.1 |
MS.gene036866.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 238 | 309 | 2.96e-11 | 65.5 |
MS.gene036866.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 3.08e-11 | 64.3 |
MS.gene036866.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 198 | 269 | 3.12e-11 | 65.1 |
MS.gene036866.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 198 | 269 | 3.12e-11 | 65.1 |
MS.gene036866.t1 | AT2G42660 | 46.250 | 80 | 41 | 1 | 225 | 302 | 38 | 117 | 4.28e-11 | 63.5 |
MS.gene036866.t1 | AT1G67710 | 47.887 | 71 | 37 | 0 | 223 | 293 | 116 | 186 | 6.87e-11 | 64.3 |
MS.gene036866.t1 | AT1G67710 | 47.887 | 71 | 37 | 0 | 223 | 293 | 107 | 177 | 7.22e-11 | 64.3 |
MS.gene036866.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 8.40e-11 | 63.9 |
MS.gene036866.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 8.81e-11 | 63.9 |
MS.gene036866.t1 | AT1G32240 | 51.724 | 58 | 28 | 0 | 231 | 288 | 209 | 266 | 9.07e-11 | 63.5 |
MS.gene036866.t1 | AT1G32240 | 51.724 | 58 | 28 | 0 | 231 | 288 | 209 | 266 | 9.59e-11 | 63.5 |
MS.gene036866.t1 | AT5G16560 | 54.545 | 55 | 25 | 0 | 234 | 288 | 218 | 272 | 9.67e-11 | 63.9 |
MS.gene036866.t1 | AT5G42630 | 54.545 | 55 | 25 | 0 | 234 | 288 | 104 | 158 | 9.70e-11 | 62.0 |
Find 99 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAACTCCCTTATCTGTTT+TGG | 0.218983 | 8.1:+13156670 | None:intergenic |
AATGATAACAATAACAATAT+TGG | 0.280258 | 8.1:-13157597 | MS.gene036866:CDS |
TGGAGCCAAACAAGTGAATT+AGG | 0.287496 | 8.1:-13157654 | MS.gene036866:CDS |
TTGTTCCTAATTCACTTGTT+TGG | 0.309917 | 8.1:+13157649 | None:intergenic |
TTCTTGCTTTCCTATGAGTT+TGG | 0.321167 | 8.1:+13157325 | None:intergenic |
GGATGACAAGTGCACAATTA+TGG | 0.322662 | 8.1:-13157674 | MS.gene036866:CDS |
AGGGAGTTGATGAAGGTTGA+TGG | 0.335126 | 8.1:-13156658 | MS.gene036866:CDS |
GGTATGAATTCTTCTAGAAT+TGG | 0.343936 | 8.1:+13157768 | None:intergenic |
GCTCCACCATTTCTATGTTT+AGG | 0.345291 | 8.1:+13157561 | None:intergenic |
TGTGCTGCAGTTGCATATTC+TGG | 0.345650 | 8.1:+13156309 | None:intergenic |
CATGCTGGAGAGGTAGAAAA+AGG | 0.354964 | 8.1:-13157438 | MS.gene036866:CDS |
TTATTATTGAACAGAAATAT+AGG | 0.370436 | 8.1:-13156416 | MS.gene036866:intron |
TCCATGTTACTGAAATCATT+TGG | 0.380670 | 8.1:-13158123 | MS.gene036866:CDS |
ATGTATGTGATAAGGCAAAT+TGG | 0.383284 | 8.1:-13157695 | MS.gene036866:CDS |
GAAGTTGATCATCAAGGAAA+AGG | 0.397063 | 8.1:-13157396 | MS.gene036866:CDS |
AGGATGAAGGGGAGAGGAAA+GGG | 0.399338 | 8.1:-13156020 | MS.gene036866:CDS |
CCAAGTCCAAGTGCACAAAA+TGG | 0.410271 | 8.1:-13156378 | MS.gene036866:CDS |
AGGGGAGTTCTGAGGATGAA+GGG | 0.415570 | 8.1:-13156032 | MS.gene036866:CDS |
ACAAATCTACGGTGCAAGTC+TGG | 0.427901 | 8.1:+13157291 | None:intergenic |
GGAGGAACCCCTACTCTCTA+TGG | 0.427913 | 8.1:-13156282 | MS.gene036866:CDS |
GATGATGCTAATTGCTTCAC+TGG | 0.429693 | 8.1:+13157747 | None:intergenic |
GGGTTGGAGAGTATCGAAAA+TGG | 0.429853 | 8.1:-13156084 | MS.gene036866:CDS |
GTAGAAGCTAGTGCTAGTTC+AGG | 0.432544 | 8.1:+13157483 | None:intergenic |
GGAAGTAGCTGCTGCGGCGG+CGG | 0.442713 | 8.1:+13156180 | None:intergenic |
ACAATTCAAACCAAACTCAT+AGG | 0.443130 | 8.1:-13157335 | MS.gene036866:CDS |
GTTAATGCTCTTCAAATGCT+TGG | 0.449127 | 8.1:-13157270 | MS.gene036866:CDS |
GAGGGGAGTTCTGAGGATGA+AGG | 0.449245 | 8.1:-13156033 | MS.gene036866:CDS |
AAATAATAATGTATGTGATA+AGG | 0.450078 | 8.1:-13157703 | MS.gene036866:CDS |
ATTAGTCCTAAACATAGAAA+TGG | 0.460300 | 8.1:-13157567 | MS.gene036866:CDS |
GAGGATGAAGGGGAGAGGAA+AGG | 0.465500 | 8.1:-13156021 | MS.gene036866:CDS |
CACATGTCTCCGGTGAACCT+TGG | 0.465967 | 8.1:+13156112 | None:intergenic |
GGCAACACCAAAACAGATAA+GGG | 0.469043 | 8.1:-13156677 | MS.gene036866:CDS |
AACCCGTCTCCACATGTCTC+CGG | 0.479058 | 8.1:+13156102 | None:intergenic |
GGGGAGTTCTGAGGATGAAG+GGG | 0.481259 | 8.1:-13156031 | MS.gene036866:CDS |
GGTTTGTTGAAGAGAGCAAT+GGG | 0.485151 | 8.1:-13155999 | MS.gene036866:CDS |
TGAGTTTGTGATGATGCTAC+TGG | 0.486233 | 8.1:+13157369 | None:intergenic |
CAGTAGTGTAGTACTGATCT+TGG | 0.489595 | 8.1:+13156205 | None:intergenic |
TTCACCATCTGAACTAGGCT+TGG | 0.491547 | 8.1:-13158166 | MS.gene036866:CDS |
CCACATTACTGCACTGCTCC+AGG | 0.496026 | 8.1:-13156228 | MS.gene036866:CDS |
GCCACACGGCCAAGGTTCAC+CGG | 0.500443 | 8.1:-13156121 | MS.gene036866:CDS |
ATTAGCATCATCAGAAACAT+TGG | 0.504933 | 8.1:-13157736 | MS.gene036866:CDS |
GTTCTGAGGATGAAGGGGAG+AGG | 0.509113 | 8.1:-13156026 | MS.gene036866:CDS |
CAAATGCTTGGTGGATCTCA+AGG | 0.514435 | 8.1:-13157258 | MS.gene036866:intron |
GATGACCACCATAGAGAGTA+GGG | 0.520807 | 8.1:+13156274 | None:intergenic |
GAAGAGGATAAGAAACATGC+TGG | 0.521576 | 8.1:-13157453 | MS.gene036866:CDS |
GTGTAGTACTGATCTTGGCC+TGG | 0.523675 | 8.1:+13156210 | None:intergenic |
TGGCAACACCAAAACAGATA+AGG | 0.524534 | 8.1:-13156678 | MS.gene036866:CDS |
GGCGGAAGTAGCTGCTGCGG+CGG | 0.525740 | 8.1:+13156177 | None:intergenic |
GAGAGTAGTAGCTGGAAAGA+GGG | 0.527047 | 8.1:-13156051 | MS.gene036866:CDS |
AAGTTGATCATCAAGGAAAA+GGG | 0.527682 | 8.1:-13157395 | MS.gene036866:CDS |
TGCATGCAACTTCTCACAAA+CGG | 0.528281 | 8.1:-13158003 | MS.gene036866:intron |
AGAGTGAGATGATGAGAAGT+AGG | 0.531857 | 8.1:+13156252 | None:intergenic |
AAAACTACTAGCTGTGCTGC+TGG | 0.531932 | 8.1:+13156351 | None:intergenic |
CAAGCGTTTAGATCGAATCA+AGG | 0.533730 | 8.1:-13157798 | MS.gene036866:CDS |
GGGTTTGTTGAAGAGAGCAA+TGG | 0.536366 | 8.1:-13156000 | MS.gene036866:CDS |
GAAGAGCATTAACAAATCTA+CGG | 0.536877 | 8.1:+13157280 | None:intergenic |
TCCAAATGATTTCAGTAACA+TGG | 0.537583 | 8.1:+13158122 | None:intergenic |
CACCGGAGACATGTGGAGAC+GGG | 0.540363 | 8.1:-13156104 | MS.gene036866:CDS |
ATGGCTTCACCATCTGAACT+AGG | 0.543239 | 8.1:-13158171 | MS.gene036866:CDS |
CAATCCAAGCCTAGTTCAGA+TGG | 0.544635 | 8.1:+13158162 | None:intergenic |
TGAAGTTAAAAGCCATCTGC+AGG | 0.544962 | 8.1:-13156623 | MS.gene036866:intron |
GGAGAGTAGTAGCTGGAAAG+AGG | 0.546618 | 8.1:-13156052 | MS.gene036866:CDS |
AATGCTCTTCAAATGCTTGG+TGG | 0.549954 | 8.1:-13157267 | MS.gene036866:CDS |
ACAGATAAGGGAGTTGATGA+AGG | 0.551674 | 8.1:-13156665 | MS.gene036866:CDS |
GGATGACCACCATAGAGAGT+AGG | 0.564523 | 8.1:+13156273 | None:intergenic |
GGATAAGAAACATGCTGGAG+AGG | 0.570240 | 8.1:-13157448 | MS.gene036866:CDS |
AGACGTCGGAGAGTAGTAGC+TGG | 0.573303 | 8.1:-13156059 | MS.gene036866:CDS |
TATGCAACTGCAGCACATGC+AGG | 0.576335 | 8.1:-13156303 | MS.gene036866:CDS |
GAGAGAGAATTACCTGCAGA+TGG | 0.576980 | 8.1:+13156611 | None:intergenic |
TCACCGGAGACATGTGGAGA+CGG | 0.576988 | 8.1:-13156105 | MS.gene036866:CDS |
GGGAATGAAGTTGATCATCA+AGG | 0.578253 | 8.1:-13157402 | MS.gene036866:CDS |
AGTCCTAAACATAGAAATGG+TGG | 0.579197 | 8.1:-13157564 | MS.gene036866:CDS |
GGAGACATGTGGAGACGGGT+TGG | 0.587274 | 8.1:-13156100 | MS.gene036866:CDS |
AGAAATAACTCCTCTTGTCA+AGG | 0.588185 | 8.1:-13157516 | MS.gene036866:CDS |
GCTGCAGTTGCATATTCTGG+TGG | 0.594788 | 8.1:+13156312 | None:intergenic |
TGAACCTTGGCCGTGTGGCG+TGG | 0.595965 | 8.1:+13156125 | None:intergenic |
ATAGGAAAGCAAGAAGGTGT+TGG | 0.602381 | 8.1:-13157317 | MS.gene036866:CDS |
AAGACCACGCCACACGGCCA+AGG | 0.603883 | 8.1:-13156129 | MS.gene036866:CDS |
CTGCAGTTGCATATTCTGGT+GGG | 0.605931 | 8.1:+13156313 | None:intergenic |
AGTAACATGGAGTAGCTATG+TGG | 0.617118 | 8.1:+13158135 | None:intergenic |
TGGTGCATGTGATGAGGTGG+CGG | 0.620813 | 8.1:+13156159 | None:intergenic |
AACTCCTCTTGTCAAGGACA+AGG | 0.622383 | 8.1:-13157510 | MS.gene036866:CDS |
GTGGCGTGGTCTTGTAGACA+TGG | 0.624325 | 8.1:+13156139 | None:intergenic |
CTGGAAAGAGGGGAGTTCTG+AGG | 0.624534 | 8.1:-13156040 | MS.gene036866:CDS |
GGTGGCGGAAGTAGCTGCTG+CGG | 0.626284 | 8.1:+13156174 | None:intergenic |
AGAGTAGTAGCTGGAAAGAG+GGG | 0.629458 | 8.1:-13156050 | MS.gene036866:CDS |
AAGACCTTGTCCTTGACAAG+AGG | 0.632597 | 8.1:+13157506 | None:intergenic |
AAACTCATAGGAAAGCAAGA+AGG | 0.642113 | 8.1:-13157323 | MS.gene036866:CDS |
TCCGGTGAACCTTGGCCGTG+TGG | 0.647253 | 8.1:+13156120 | None:intergenic |
GTCTACAAGACCACGCCACA+CGG | 0.648472 | 8.1:-13156135 | MS.gene036866:CDS |
ACATGGTGCATGTGATGAGG+TGG | 0.655489 | 8.1:+13156156 | None:intergenic |
CCTGGAGCAGTGCAGTAATG+TGG | 0.657609 | 8.1:+13156228 | None:intergenic |
GTGAGAAGTTGCATGCAGAG+AGG | 0.660628 | 8.1:+13158009 | None:intergenic |
CAAGGTTCACCGGAGACATG+TGG | 0.663048 | 8.1:-13156111 | MS.gene036866:CDS |
TAGACATGGTGCATGTGATG+AGG | 0.673422 | 8.1:+13156153 | None:intergenic |
GCAACTGCAGCACATGCAGG+AGG | 0.687455 | 8.1:-13156300 | MS.gene036866:CDS |
TATCGAAAATGGAAAGACGT+CGG | 0.689251 | 8.1:-13156073 | MS.gene036866:CDS |
GGAACCCCTACTCTCTATGG+TGG | 0.690464 | 8.1:-13156279 | MS.gene036866:CDS |
ATGACCACCATAGAGAGTAG+GGG | 0.721767 | 8.1:+13156275 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCTCTTATTTATTTTTTTT+GGG | + | chr8.1:13157271-13157290 | None:intergenic | 10.0% |
!! | AAATAATAATGTATGTGATA+AGG | - | chr8.1:13156443-13156462 | MS.gene036866:intron | 15.0% |
!! | AAATTTAGTCAAATGTTATT+AGG | - | chr8.1:13157294-13157313 | MS.gene036866:CDS | 15.0% |
!! | AACAATTCTAGTAATTTAAA+TGG | - | chr8.1:13157168-13157187 | MS.gene036866:intron | 15.0% |
!! | AATGATAACAATAACAATAT+TGG | - | chr8.1:13156549-13156568 | MS.gene036866:intron | 15.0% |
!! | ACAATTCTAGTAATTTAAAT+GGG | - | chr8.1:13157169-13157188 | MS.gene036866:intron | 15.0% |
!! | GTTACATATAAAAGAAAAAA+AGG | + | chr8.1:13156184-13156203 | None:intergenic | 15.0% |
!! | TAGTATTAAAAAAGAATAGA+TGG | - | chr8.1:13157013-13157032 | MS.gene036866:intron | 15.0% |
!! | TTATTATTGAACAGAAATAT+AGG | - | chr8.1:13157730-13157749 | MS.gene036866:CDS | 15.0% |
!!! | CATCTCTTATTTATTTTTTT+TGG | + | chr8.1:13157272-13157291 | None:intergenic | 15.0% |
!! | AAAAAGGTAAAACAAATTCA+GGG | - | chr8.1:13156724-13156743 | MS.gene036866:intron | 20.0% |
!! | ACATATAAAAGAAAAAAAGG+TGG | + | chr8.1:13156181-13156200 | None:intergenic | 20.0% |
!! | ATATGTTTGTTTAATTGTAG+TGG | - | chr8.1:13157448-13157467 | MS.gene036866:CDS | 20.0% |
!! | GTTTCTTATAAAATAGTCTT+AGG | - | chr8.1:13157066-13157085 | MS.gene036866:intron | 20.0% |
!! | TGCAAAAGAAACATATAATA+AGG | + | chr8.1:13156983-13157002 | None:intergenic | 20.0% |
!!! | GTTATCATTAATTTCTTTTG+TGG | + | chr8.1:13156538-13156557 | None:intergenic | 20.0% |
!!! | TTATTTCTTTCTTTTGAGAA+TGG | + | chr8.1:13156618-13156637 | None:intergenic | 20.0% |
! | AATACCACTAGTATCAATTA+TGG | - | chr8.1:13157124-13157143 | MS.gene036866:intron | 25.0% |
! | ATAATTGATACTAGTGGTAT+TGG | + | chr8.1:13157125-13157144 | None:intergenic | 25.0% |
! | ATTAGTCCTAAACATAGAAA+TGG | - | chr8.1:13156579-13156598 | MS.gene036866:intron | 25.0% |
! | GAAAAAGGTAAAACAAATTC+AGG | - | chr8.1:13156723-13156742 | MS.gene036866:intron | 25.0% |
! | TAATTGATACTAGTGGTATT+GGG | + | chr8.1:13157124-13157143 | None:intergenic | 25.0% |
!! | CTTTTGTATTTTACTTTGCT+TGG | - | chr8.1:13157666-13157685 | MS.gene036866:CDS | 25.0% |
!!! | TTCTTTTGAGAATGGTAAAA+AGG | + | chr8.1:13156610-13156629 | None:intergenic | 25.0% |
ACAATTCAAACCAAACTCAT+AGG | - | chr8.1:13156811-13156830 | MS.gene036866:intron | 30.0% | |
ATGTATGTGATAAGGCAAAT+TGG | - | chr8.1:13156451-13156470 | MS.gene036866:intron | 30.0% | |
ATTAGCATCATCAGAAACAT+TGG | - | chr8.1:13156410-13156429 | MS.gene036866:intron | 30.0% | |
TAAGCCATAATTGATACTAG+TGG | + | chr8.1:13157131-13157150 | None:intergenic | 30.0% | |
TAATTCTCTCTCTCAGTTTA+AGG | - | chr8.1:13157546-13157565 | MS.gene036866:CDS | 30.0% | |
TCCAAATGATTTCAGTAACA+TGG | + | chr8.1:13156027-13156046 | None:intergenic | 30.0% | |
TCCATGTTACTGAAATCATT+TGG | - | chr8.1:13156023-13156042 | MS.gene036866:CDS | 30.0% | |
TGTCAGATAAGATTTGAACT+CGG | + | chr8.1:13156240-13156259 | None:intergenic | 30.0% | |
TTGTTCCTAATTCACTTGTT+TGG | + | chr8.1:13156500-13156519 | None:intergenic | 30.0% | |
! | AAGTTGATCATCAAGGAAAA+GGG | - | chr8.1:13156751-13156770 | MS.gene036866:intron | 30.0% |
!! | GAAGAGCATTAACAAATCTA+CGG | + | chr8.1:13156869-13156888 | None:intergenic | 30.0% |
!! | GGTATGAATTCTTCTAGAAT+TGG | + | chr8.1:13156381-13156400 | None:intergenic | 30.0% |
!!! | AGTAGTTTTAGGAGGAATAT+GGG | - | chr8.1:13157809-13157828 | MS.gene036866:CDS | 30.0% |
!!! | ATGGCTTTTAACTTCATCAT+TGG | + | chr8.1:13157519-13157538 | None:intergenic | 30.0% |
!!! | TAGTAGTTTTAGGAGGAATA+TGG | - | chr8.1:13157808-13157827 | MS.gene036866:CDS | 30.0% |
AAACTCATAGGAAAGCAAGA+AGG | - | chr8.1:13156823-13156842 | MS.gene036866:intron | 35.0% | |
AGAAATAACTCCTCTTGTCA+AGG | - | chr8.1:13156630-13156649 | MS.gene036866:CDS | 35.0% | |
AGCTTCTACTCAAAAAGAAG+AGG | - | chr8.1:13156677-13156696 | MS.gene036866:CDS | 35.0% | |
AGTACAGCAACAAACAACAA+AGG | + | chr8.1:13157609-13157628 | None:intergenic | 35.0% | |
AGTCCTAAACATAGAAATGG+TGG | - | chr8.1:13156582-13156601 | MS.gene036866:intron | 35.0% | |
AGTTCGTTATAAGTTGTCAG+AGG | + | chr8.1:13157648-13157667 | None:intergenic | 35.0% | |
GAAGCAGAGATGTGAAATTT+AGG | - | chr8.1:13157237-13157256 | MS.gene036866:intron | 35.0% | |
GTTAATGCTCTTCAAATGCT+TGG | - | chr8.1:13156876-13156895 | MS.gene036866:intron | 35.0% | |
TATCGAAAATGGAAAGACGT+CGG | - | chr8.1:13158073-13158092 | MS.gene036866:CDS | 35.0% | |
TTCTTGCTTTCCTATGAGTT+TGG | + | chr8.1:13156824-13156843 | None:intergenic | 35.0% | |
! | ATCAACTCCCTTATCTGTTT+TGG | + | chr8.1:13157479-13157498 | None:intergenic | 35.0% |
! | GAAGTTGATCATCAAGGAAA+AGG | - | chr8.1:13156750-13156769 | MS.gene036866:intron | 35.0% |
AATGCTCTTCAAATGCTTGG+TGG | - | chr8.1:13156879-13156898 | MS.gene036866:intron | 40.0% | |
AGAGTGAGATGATGAGAAGT+AGG | + | chr8.1:13157897-13157916 | None:intergenic | 40.0% | |
AGTAACATGGAGTAGCTATG+TGG | + | chr8.1:13156014-13156033 | None:intergenic | 40.0% | |
CAAGCGTTTAGATCGAATCA+AGG | - | chr8.1:13156348-13156367 | MS.gene036866:CDS | 40.0% | |
GAAGAGGATAAGAAACATGC+TGG | - | chr8.1:13156693-13156712 | MS.gene036866:intron | 40.0% | |
GATGATGCTAATTGCTTCAC+TGG | + | chr8.1:13156402-13156421 | None:intergenic | 40.0% | |
GCTCCACCATTTCTATGTTT+AGG | + | chr8.1:13156588-13156607 | None:intergenic | 40.0% | |
GGATGACAAGTGCACAATTA+TGG | - | chr8.1:13156472-13156491 | MS.gene036866:intron | 40.0% | |
GGCAACACCAAAACAGATAA+GGG | - | chr8.1:13157469-13157488 | MS.gene036866:CDS | 40.0% | |
TGAAGTTAAAAGCCATCTGC+AGG | - | chr8.1:13157523-13157542 | MS.gene036866:CDS | 40.0% | |
TGCATGCAACTTCTCACAAA+CGG | - | chr8.1:13156143-13156162 | MS.gene036866:CDS | 40.0% | |
TGGAGCCAAACAAGTGAATT+AGG | - | chr8.1:13156492-13156511 | MS.gene036866:intron | 40.0% | |
TGGCAACACCAAAACAGATA+AGG | - | chr8.1:13157468-13157487 | MS.gene036866:CDS | 40.0% | |
! | ATAGGAAAGCAAGAAGGTGT+TGG | - | chr8.1:13156829-13156848 | MS.gene036866:intron | 40.0% |
! | GGGAATGAAGTTGATCATCA+AGG | - | chr8.1:13156744-13156763 | MS.gene036866:intron | 40.0% |
! | TGAGTTTGTGATGATGCTAC+TGG | + | chr8.1:13156780-13156799 | None:intergenic | 40.0% |
!! | ACAGATAAGGGAGTTGATGA+AGG | - | chr8.1:13157481-13157500 | MS.gene036866:CDS | 40.0% |
!! | CAGTAGTGTAGTACTGATCT+TGG | + | chr8.1:13157944-13157963 | None:intergenic | 40.0% |
!! | GGTTTGTTGAAGAGAGCAAT+GGG | - | chr8.1:13158147-13158166 | MS.gene036866:CDS | 40.0% |
AAAACTACTAGCTGTGCTGC+TGG | + | chr8.1:13157798-13157817 | None:intergenic | 45.0% | |
AACTCCTCTTGTCAAGGACA+AGG | - | chr8.1:13156636-13156655 | MS.gene036866:CDS | 45.0% | |
AAGACCTTGTCCTTGACAAG+AGG | + | chr8.1:13156643-13156662 | None:intergenic | 45.0% | |
ACAAATCTACGGTGCAAGTC+TGG | + | chr8.1:13156858-13156877 | None:intergenic | 45.0% | |
AGAGTAGTAGCTGGAAAGAG+GGG | - | chr8.1:13158096-13158115 | MS.gene036866:CDS | 45.0% | |
ATGACCACCATAGAGAGTAG+GGG | + | chr8.1:13157874-13157893 | None:intergenic | 45.0% | |
ATGGCTTCACCATCTGAACT+AGG | - | chr8.1:13155975-13155994 | MS.gene036866:CDS | 45.0% | |
CAATCCAAGCCTAGTTCAGA+TGG | + | chr8.1:13155987-13156006 | None:intergenic | 45.0% | |
CATGCTGGAGAGGTAGAAAA+AGG | - | chr8.1:13156708-13156727 | MS.gene036866:intron | 45.0% | |
CCAAGTCCAAGTGCACAAAA+TGG | - | chr8.1:13157768-13157787 | MS.gene036866:CDS | 45.0% | |
CTGCAGTTGCATATTCTGGT+GGG | + | chr8.1:13157836-13157855 | None:intergenic | 45.0% | |
GAGAGAGAATTACCTGCAGA+TGG | + | chr8.1:13157538-13157557 | None:intergenic | 45.0% | |
GAGAGTAGTAGCTGGAAAGA+GGG | - | chr8.1:13158095-13158114 | MS.gene036866:CDS | 45.0% | |
GATGACCACCATAGAGAGTA+GGG | + | chr8.1:13157875-13157894 | None:intergenic | 45.0% | |
GGATAAGAAACATGCTGGAG+AGG | - | chr8.1:13156698-13156717 | MS.gene036866:intron | 45.0% | |
GTAGAAGCTAGTGCTAGTTC+AGG | + | chr8.1:13156666-13156685 | None:intergenic | 45.0% | |
TAGACATGGTGCATGTGATG+AGG | + | chr8.1:13157996-13158015 | None:intergenic | 45.0% | |
TGTGCTGCAGTTGCATATTC+TGG | + | chr8.1:13157840-13157859 | None:intergenic | 45.0% | |
TTCACCATCTGAACTAGGCT+TGG | - | chr8.1:13155980-13155999 | MS.gene036866:CDS | 45.0% | |
! | CAAATGCTTGGTGGATCTCA+AGG | - | chr8.1:13156888-13156907 | MS.gene036866:intron | 45.0% |
! | CCATTTTGTGCACTTGGACT+TGG | + | chr8.1:13157771-13157790 | None:intergenic | 45.0% |
! | GCAGCACAGCTAGTAGTTTT+AGG | - | chr8.1:13157798-13157817 | MS.gene036866:CDS | 45.0% |
! | TCGTGCACAATTTTCAGCGA+TGG | - | chr8.1:13156305-13156324 | MS.gene036866:CDS | 45.0% |
!! | AGGGAGTTGATGAAGGTTGA+TGG | - | chr8.1:13157488-13157507 | MS.gene036866:CDS | 45.0% |
!! | GGGTTGGAGAGTATCGAAAA+TGG | - | chr8.1:13158062-13158081 | MS.gene036866:CDS | 45.0% |
!! | GGGTTTGTTGAAGAGAGCAA+TGG | - | chr8.1:13158146-13158165 | MS.gene036866:CDS | 45.0% |
!!! | GCACAGCTAGTAGTTTTAGG+AGG | - | chr8.1:13157801-13157820 | MS.gene036866:CDS | 45.0% |
ACATGGTGCATGTGATGAGG+TGG | + | chr8.1:13157993-13158012 | None:intergenic | 50.0% | |
AGGATGAAGGGGAGAGGAAA+GGG | - | chr8.1:13158126-13158145 | MS.gene036866:CDS | 50.0% | |
GCTGCAGTTGCATATTCTGG+TGG | + | chr8.1:13157837-13157856 | None:intergenic | 50.0% | |
GGAGAGTAGTAGCTGGAAAG+AGG | - | chr8.1:13158094-13158113 | MS.gene036866:CDS | 50.0% | |
GGATGACCACCATAGAGAGT+AGG | + | chr8.1:13157876-13157895 | None:intergenic | 50.0% | |
GTGAGAAGTTGCATGCAGAG+AGG | + | chr8.1:13156140-13156159 | None:intergenic | 50.0% | |
TATGCAACTGCAGCACATGC+AGG | - | chr8.1:13157843-13157862 | MS.gene036866:intron | 50.0% | |
TGAACTCGGTCTCTTGAGAG+CGG | + | chr8.1:13156226-13156245 | None:intergenic | 50.0% | |
! | GGTGCACCATTTTGTGCACT+TGG | + | chr8.1:13157777-13157796 | None:intergenic | 50.0% |
!! | AGGGGAGTTCTGAGGATGAA+GGG | - | chr8.1:13158114-13158133 | MS.gene036866:CDS | 50.0% |
!! | GTGTAGTACTGATCTTGGCC+TGG | + | chr8.1:13157939-13157958 | None:intergenic | 50.0% |
AACCCGTCTCCACATGTCTC+CGG | + | chr8.1:13158047-13158066 | None:intergenic | 55.0% | |
AGACGTCGGAGAGTAGTAGC+TGG | - | chr8.1:13158087-13158106 | MS.gene036866:CDS | 55.0% | |
CAAGGTTCACCGGAGACATG+TGG | - | chr8.1:13158035-13158054 | MS.gene036866:CDS | 55.0% | |
CACATGTCTCCGGTGAACCT+TGG | + | chr8.1:13158037-13158056 | None:intergenic | 55.0% | |
CCACATTACTGCACTGCTCC+AGG | - | chr8.1:13157918-13157937 | MS.gene036866:intron | 55.0% | |
CCTGGAGCAGTGCAGTAATG+TGG | + | chr8.1:13157921-13157940 | None:intergenic | 55.0% | |
CTGGAAAGAGGGGAGTTCTG+AGG | - | chr8.1:13158106-13158125 | MS.gene036866:CDS | 55.0% | |
GAGGATGAAGGGGAGAGGAA+AGG | - | chr8.1:13158125-13158144 | MS.gene036866:CDS | 55.0% | |
GGAACCCCTACTCTCTATGG+TGG | - | chr8.1:13157867-13157886 | MS.gene036866:intron | 55.0% | |
GGAGGAACCCCTACTCTCTA+TGG | - | chr8.1:13157864-13157883 | MS.gene036866:intron | 55.0% | |
GTCTACAAGACCACGCCACA+CGG | - | chr8.1:13158011-13158030 | MS.gene036866:CDS | 55.0% | |
TCACCGGAGACATGTGGAGA+CGG | - | chr8.1:13158041-13158060 | MS.gene036866:CDS | 55.0% | |
TGGTGCATGTGATGAGGTGG+CGG | + | chr8.1:13157990-13158009 | None:intergenic | 55.0% | |
!! | GAGGGGAGTTCTGAGGATGA+AGG | - | chr8.1:13158113-13158132 | MS.gene036866:CDS | 55.0% |
!! | GGGGAGTTCTGAGGATGAAG+GGG | - | chr8.1:13158115-13158134 | MS.gene036866:CDS | 55.0% |
!! | GTGGCGTGGTCTTGTAGACA+TGG | + | chr8.1:13158010-13158029 | None:intergenic | 55.0% |
!! | GTTCTGAGGATGAAGGGGAG+AGG | - | chr8.1:13158120-13158139 | MS.gene036866:CDS | 55.0% |
CACCGGAGACATGTGGAGAC+GGG | - | chr8.1:13158042-13158061 | MS.gene036866:CDS | 60.0% | |
GCAACTGCAGCACATGCAGG+AGG | - | chr8.1:13157846-13157865 | MS.gene036866:intron | 60.0% | |
GGAGACATGTGGAGACGGGT+TGG | - | chr8.1:13158046-13158065 | MS.gene036866:CDS | 60.0% | |
AAGACCACGCCACACGGCCA+AGG | - | chr8.1:13158017-13158036 | MS.gene036866:CDS | 65.0% | |
GCCACACGGCCAAGGTTCAC+CGG | - | chr8.1:13158025-13158044 | MS.gene036866:CDS | 65.0% | |
TCCGGTGAACCTTGGCCGTG+TGG | + | chr8.1:13158029-13158048 | None:intergenic | 65.0% | |
TGAACCTTGGCCGTGTGGCG+TGG | + | chr8.1:13158024-13158043 | None:intergenic | 65.0% | |
!! | GGTGGCGGAAGTAGCTGCTG+CGG | + | chr8.1:13157975-13157994 | None:intergenic | 65.0% |
GGAAGTAGCTGCTGCGGCGG+CGG | + | chr8.1:13157969-13157988 | None:intergenic | 70.0% | |
GGCGGAAGTAGCTGCTGCGG+CGG | + | chr8.1:13157972-13157991 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 13155975 | 13158193 | 13155975 | ID=MS.gene036866 |
chr8.1 | mRNA | 13155975 | 13158193 | 13155975 | ID=MS.gene036866.t1;Parent=MS.gene036866 |
chr8.1 | exon | 13158004 | 13158193 | 13158004 | ID=MS.gene036866.t1.exon1;Parent=MS.gene036866.t1 |
chr8.1 | CDS | 13158004 | 13158193 | 13158004 | ID=cds.MS.gene036866.t1;Parent=MS.gene036866.t1 |
chr8.1 | exon | 13157259 | 13157846 | 13157259 | ID=MS.gene036866.t1.exon2;Parent=MS.gene036866.t1 |
chr8.1 | CDS | 13157259 | 13157846 | 13157259 | ID=cds.MS.gene036866.t1;Parent=MS.gene036866.t1 |
chr8.1 | exon | 13156624 | 13156700 | 13156624 | ID=MS.gene036866.t1.exon3;Parent=MS.gene036866.t1 |
chr8.1 | CDS | 13156624 | 13156700 | 13156624 | ID=cds.MS.gene036866.t1;Parent=MS.gene036866.t1 |
chr8.1 | exon | 13155975 | 13156424 | 13155975 | ID=MS.gene036866.t1.exon4;Parent=MS.gene036866.t1 |
chr8.1 | CDS | 13155975 | 13156424 | 13155975 | ID=cds.MS.gene036866.t1;Parent=MS.gene036866.t1 |
Gene Sequence |
Protein sequence |