AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03693

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03693.t1 MTR_3g045430 90.584 308 10 3 1 299 1 298 0.0 522
MS.gene03693.t1 MTR_6g009430 35.920 348 162 10 1 299 1 336 2.10e-56 185
MS.gene03693.t1 MTR_3g461490 60.584 137 50 4 1 135 1 135 3.46e-48 164
MS.gene03693.t1 MTR_7g011170 54.264 129 57 2 1 128 1 128 5.55e-41 144
MS.gene03693.t1 MTR_2g011660 48.062 129 66 1 1 128 1 129 1.35e-40 144
MS.gene03693.t1 MTR_4g091490 47.761 134 69 1 1 133 1 134 3.89e-40 143
MS.gene03693.t1 MTR_1g085040 50.735 136 65 2 1 135 1 135 4.22e-39 141
MS.gene03693.t1 MTR_4g082290 44.886 176 85 4 1 165 1 175 6.53e-39 141
MS.gene03693.t1 MTR_1g112760 50.000 130 64 1 1 129 1 130 1.18e-38 136
MS.gene03693.t1 MTR_1g085640 51.128 133 63 2 1 132 1 132 1.21e-38 140
MS.gene03693.t1 MTR_7g110830 50.376 133 64 2 1 132 1 132 2.12e-38 139
MS.gene03693.t1 MTR_4g102380 50.000 132 64 2 1 131 1 131 3.19e-38 136
MS.gene03693.t1 MTR_6g012690 51.163 129 61 2 1 128 1 128 4.36e-38 138
MS.gene03693.t1 MTR_5g007370 35.242 227 128 5 1 226 1 209 3.18e-37 134
MS.gene03693.t1 MTR_4g082230 43.750 176 87 4 1 165 1 175 3.30e-37 137
MS.gene03693.t1 MTR_3g077110 50.806 124 60 1 7 129 6 129 3.48e-37 135
MS.gene03693.t1 MTR_5g029840 48.837 129 64 2 1 128 1 128 8.27e-37 134
MS.gene03693.t1 MTR_3g074520 47.407 135 69 2 1 134 1 134 1.43e-36 134
MS.gene03693.t1 MTR_4g073420 45.865 133 70 2 1 132 1 132 2.89e-36 131
MS.gene03693.t1 MTR_4g105130 49.242 132 65 2 1 131 1 131 3.60e-36 133
MS.gene03693.t1 MTR_4g478180 48.062 129 66 1 1 128 1 129 3.83e-36 133
MS.gene03693.t1 MTR_7g076740 47.059 136 69 2 1 134 1 135 5.56e-36 131
MS.gene03693.t1 MTR_5g078140 48.092 131 66 2 1 130 1 130 8.11e-36 131
MS.gene03693.t1 MTR_3g065440 47.794 136 69 2 1 135 1 135 1.72e-35 130
MS.gene03693.t1 MTR_2g089620 45.736 129 68 2 1 128 1 128 1.74e-35 130
MS.gene03693.t1 MTR_8g095390 46.617 133 69 2 1 132 1 132 4.47e-35 129
MS.gene03693.t1 MTR_5g079670 42.581 155 83 3 2 155 1 150 6.86e-35 125
MS.gene03693.t1 MTR_4g057635 53.077 130 56 5 1 127 1 128 1.60e-34 128
MS.gene03693.t1 MTR_3g097450 45.802 131 69 2 1 130 1 130 2.25e-34 127
MS.gene03693.t1 MTR_8g031360 46.970 132 68 2 1 130 1 132 4.04e-34 126
MS.gene03693.t1 MTR_5g042030 47.899 119 61 1 13 130 7 125 7.21e-34 125
MS.gene03693.t1 MTR_4g485530 46.032 126 67 1 2 126 1 126 8.44e-34 122
MS.gene03693.t1 MTR_2g064160 47.200 125 65 1 7 130 5 129 1.01e-33 125
MS.gene03693.t1 MTR_7g111290 51.515 132 62 2 1 131 1 131 1.26e-33 127
MS.gene03693.t1 MTR_1g017000 55.462 119 48 5 1 116 1 117 2.74e-33 122
MS.gene03693.t1 MTR_3g103570 53.390 118 52 3 1 116 1 117 2.93e-33 125
MS.gene03693.t1 MTR_0008s0390 47.414 116 60 1 1 115 1 116 4.10e-33 123
MS.gene03693.t1 MTR_5g014990 52.542 118 53 3 1 116 1 117 4.65e-33 124
MS.gene03693.t1 MTR_0251s0050 45.902 122 65 1 1 121 1 122 6.44e-33 122
MS.gene03693.t1 MTR_1g017140 51.695 118 54 3 1 116 1 117 1.61e-32 123
MS.gene03693.t1 MTR_3g083540 45.968 124 66 1 7 129 35 158 1.85e-32 122
MS.gene03693.t1 MTR_1g076150 50.420 119 57 2 1 118 1 118 3.06e-32 120
MS.gene03693.t1 MTR_1g043080 47.863 117 59 2 1 116 1 116 1.65e-31 118
MS.gene03693.t1 MTR_7g102110 52.066 121 55 3 1 119 1 120 1.77e-31 118
MS.gene03693.t1 MTR_0008s0470 46.552 116 61 1 1 115 1 116 1.91e-31 119
MS.gene03693.t1 MTR_4g121460 48.718 117 58 2 1 116 1 116 2.65e-31 119
MS.gene03693.t1 MTR_1g100653 47.059 119 61 2 1 118 1 118 3.02e-31 118
MS.gene03693.t1 MTR_1g043050 47.009 117 60 2 1 116 1 116 3.25e-31 117
MS.gene03693.t1 MTR_8g017440 43.972 141 71 3 1 134 1 140 1.99e-30 117
MS.gene03693.t1 MTR_6g090405 52.137 117 53 3 1 115 1 116 3.37e-30 114
MS.gene03693.t1 MTR_7g117730 47.009 117 60 2 1 116 1 116 7.49e-30 114
MS.gene03693.t1 MTR_8g017540 45.390 141 74 3 1 140 47 185 7.66e-30 117
MS.gene03693.t1 MTR_4g125520 45.833 120 63 2 1 119 1 119 9.94e-30 114
MS.gene03693.t1 MTR_2g089450 43.590 117 64 2 1 116 1 116 1.69e-29 112
MS.gene03693.t1 MTR_8g098860 46.429 112 59 1 6 116 5 116 2.15e-29 114
MS.gene03693.t1 MTR_3g039990 48.333 120 60 2 1 119 2 120 3.60e-29 113
MS.gene03693.t1 MTR_4g097570 50.450 111 52 3 1 109 1 110 4.14e-29 112
MS.gene03693.t1 MTR_2g034790 46.154 117 61 2 1 116 1 116 5.04e-29 113
MS.gene03693.t1 MTR_8g017500 42.857 140 78 2 2 140 1 139 5.16e-29 114
MS.gene03693.t1 MTR_7g010210 48.780 123 59 3 1 120 1 122 5.18e-29 112
MS.gene03693.t1 MTR_2g099740 44.361 133 72 2 1 132 1 132 5.18e-29 114
MS.gene03693.t1 MTR_2g095520 50.000 112 53 3 1 110 1 111 6.09e-29 113
MS.gene03693.t1 MTR_7g010210 48.780 123 59 3 1 120 1 122 7.01e-29 113
MS.gene03693.t1 MTR_8g027345 45.378 119 63 2 1 118 1 118 8.38e-29 112
MS.gene03693.t1 MTR_7g087130 46.825 126 63 3 1 123 1 125 1.89e-28 112
MS.gene03693.t1 MTR_7g096930 45.378 119 63 2 1 118 1 118 2.76e-28 110
MS.gene03693.t1 MTR_2g089420 43.590 117 63 3 1 116 1 115 3.12e-28 113
MS.gene03693.t1 MTR_0140s0030 47.899 119 60 2 1 118 2 119 4.89e-28 110
MS.gene03693.t1 MTR_0489s0020 47.899 119 60 2 1 118 2 119 4.89e-28 110
MS.gene03693.t1 MTR_0063s0090 44.737 114 61 2 1 113 1 113 9.06e-28 107
MS.gene03693.t1 MTR_1g100667 44.444 117 63 2 14 129 14 129 9.90e-28 108
MS.gene03693.t1 MTR_7g115650 45.378 119 63 2 1 118 1 118 1.03e-27 107
MS.gene03693.t1 MTR_4g128670 50.000 112 53 3 1 110 1 111 1.12e-27 110
MS.gene03693.t1 MTR_4g097570 50.000 112 52 4 1 109 1 111 1.80e-27 108
MS.gene03693.t1 MTR_5g010020 46.226 106 56 1 6 110 5 110 1.97e-27 109
MS.gene03693.t1 MTR_3g011610 44.348 115 63 1 2 115 26 140 5.32e-27 110
MS.gene03693.t1 MTR_6g012180 48.649 111 55 2 1 110 1 110 6.19e-27 107
MS.gene03693.t1 MTR_2g067420 47.706 109 55 2 3 110 5 112 1.12e-26 107
MS.gene03693.t1 MTR_1g086530 44.828 116 63 1 8 122 28 143 4.24e-26 104
MS.gene03693.t1 MTR_6g055910 47.170 106 55 1 11 115 12 117 4.53e-26 104
MS.gene03693.t1 MTR_3g052430 44.860 107 58 1 13 118 41 147 5.90e-26 107
MS.gene03693.t1 MTR_4g100720 43.363 113 63 1 12 123 12 124 6.07e-26 101
MS.gene03693.t1 MTR_8g017390 38.947 190 109 7 1 188 1 185 1.22e-25 106
MS.gene03693.t1 MTR_1g045610 48.571 105 53 1 12 115 20 124 1.33e-25 102
MS.gene03693.t1 MTR_1g110460 43.243 111 62 1 13 122 26 136 1.37e-25 103
MS.gene03693.t1 MTR_8g042410 43.519 108 60 1 9 115 33 140 1.94e-25 106
MS.gene03693.t1 MTR_8g017340 43.511 131 70 4 1 129 1 129 2.01e-25 105
MS.gene03693.t1 MTR_7g111290 59.091 88 36 0 44 131 2 89 2.57e-25 103
MS.gene03693.t1 MTR_2g097910 41.667 108 62 1 13 119 20 127 3.66e-25 102
MS.gene03693.t1 MTR_3g052450 42.991 107 60 1 13 118 40 146 4.96e-25 104
MS.gene03693.t1 MTR_8g017350 43.200 125 68 3 1 123 1 124 8.26e-25 104
MS.gene03693.t1 MTR_4g065017 39.344 122 73 1 2 122 6 127 1.59e-24 101
MS.gene03693.t1 MTR_7g035075 40.171 117 69 1 3 118 4 120 1.76e-24 98.6
MS.gene03693.t1 MTR_0247s0040 44.231 104 57 1 11 113 5 108 3.06e-24 97.1
MS.gene03693.t1 MTR_5g079120 40.517 116 68 1 2 116 50 165 3.25e-24 100
MS.gene03693.t1 MTR_1g073170 45.631 103 55 1 14 115 21 123 3.39e-24 99.0
MS.gene03693.t1 MTR_6g006030 42.593 108 61 1 13 119 14 121 4.87e-24 97.4
MS.gene03693.t1 MTR_0008s0280 40.870 115 66 2 1 114 1 114 4.92e-24 97.8
MS.gene03693.t1 MTR_1g086510 38.168 131 79 2 4 133 12 141 7.78e-24 98.2
MS.gene03693.t1 MTR_8g020490 42.017 119 63 2 1 118 1 114 8.92e-24 97.8
MS.gene03693.t1 MTR_3g028740 42.991 107 60 1 11 116 20 126 8.95e-24 99.4
MS.gene03693.t1 MTR_1g083630 43.636 110 60 2 13 121 12 120 1.06e-23 101
MS.gene03693.t1 MTR_5g078800 42.727 110 62 1 8 116 2 111 1.88e-23 97.1
MS.gene03693.t1 MTR_4g063100 43.519 108 60 1 12 118 6 113 1.97e-23 96.7
MS.gene03693.t1 MTR_5g079220 41.284 109 63 1 9 116 17 125 3.25e-23 96.7
MS.gene03693.t1 MTR_5g078860 42.727 110 62 1 8 116 2 111 5.29e-23 96.7
MS.gene03693.t1 MTR_1g062940 42.857 105 59 1 13 116 6 110 1.03e-22 94.0
MS.gene03693.t1 MTR_5g078930 43.243 111 61 2 7 115 2 112 1.06e-22 94.0
MS.gene03693.t1 MTR_8g060940 42.453 106 60 1 8 112 2 107 1.11e-22 94.7
MS.gene03693.t1 MTR_0193s0090 41.121 107 62 1 11 116 5 111 1.23e-22 93.6
MS.gene03693.t1 MTR_5g079290 40.952 105 61 1 13 116 17 121 1.45e-22 94.7
MS.gene03693.t1 MTR_1g021230 44.231 104 57 1 13 115 57 160 1.57e-22 97.1
MS.gene03693.t1 MTR_5g078910 40.909 110 64 1 8 116 2 111 3.06e-22 94.4
MS.gene03693.t1 MTR_2g096380 43.269 104 58 1 13 115 6 109 1.01e-21 91.7
MS.gene03693.t1 MTR_7g109320 44.444 117 63 2 1 116 1 116 1.06e-21 94.0
MS.gene03693.t1 MTR_5g016510 31.818 198 121 6 15 202 5 198 1.08e-21 93.2
MS.gene03693.t1 MTR_5g078950 42.718 103 58 1 12 113 6 108 1.77e-21 91.7
MS.gene03693.t1 MTR_3g101290 39.062 128 67 3 15 141 37 154 2.61e-21 90.5
MS.gene03693.t1 MTR_0197s0010 44.118 102 57 0 21 122 10 111 6.09e-21 89.4
MS.gene03693.t1 MTR_5g088610 33.333 162 72 5 14 140 10 170 6.66e-21 91.7
MS.gene03693.t1 MTR_0001s0360 40.952 105 61 1 13 116 7 111 8.06e-21 89.7
MS.gene03693.t1 MTR_5g488170 38.393 112 66 3 14 123 13 123 1.48e-20 89.0
MS.gene03693.t1 MTR_2g088170 43.269 104 58 1 13 115 29 132 1.64e-20 91.7
MS.gene03693.t1 MTR_5g088640 38.393 112 66 3 14 123 13 123 2.06e-20 89.0
MS.gene03693.t1 MTR_5g088080 38.393 112 66 3 14 123 13 123 2.13e-20 89.0
MS.gene03693.t1 MTR_5g088150 38.393 112 66 3 14 123 13 123 2.13e-20 89.0
MS.gene03693.t1 MTR_5g488210 38.393 112 66 3 14 123 13 123 2.13e-20 89.0
MS.gene03693.t1 MTR_7g017260 41.121 107 60 2 13 116 25 131 2.21e-20 89.0
MS.gene03693.t1 MTR_2g033170 41.525 118 67 2 13 129 24 140 2.57e-20 89.7
MS.gene03693.t1 MTR_4g063100 52.000 75 36 0 44 118 10 84 3.03e-20 87.4
MS.gene03693.t1 MTR_5g062790 39.286 112 65 3 14 123 10 120 5.65e-20 88.2
MS.gene03693.t1 MTR_4g019370 42.636 129 63 7 15 141 38 157 7.14e-20 88.6
MS.gene03693.t1 MTR_6g055910 53.521 71 33 0 45 115 18 88 1.95e-19 85.9
MS.gene03693.t1 MTR_4g123040 40.476 126 73 2 5 129 16 140 1.71e-18 84.3
MS.gene03693.t1 MTR_8g006470 38.532 109 64 3 13 119 10 117 1.91e-18 84.0
MS.gene03693.t1 MTR_2g096380 46.914 81 43 0 35 115 10 90 2.39e-18 82.0
MS.gene03693.t1 MTR_6g015455 40.541 111 64 2 15 124 5 114 4.65e-18 85.1
MS.gene03693.t1 MTR_4g029540 40.000 105 61 2 12 114 9 113 8.11e-18 82.0
MS.gene03693.t1 MTR_5g041570 39.286 112 64 4 9 118 128 237 9.16e-18 83.6
MS.gene03693.t1 MTR_6g074860 35.294 136 78 5 12 145 1 128 1.28e-17 80.9
MS.gene03693.t1 MTR_5g070020 33.333 117 76 2 3 118 110 225 3.08e-17 81.3
MS.gene03693.t1 MTR_4g094982 47.143 70 37 0 48 117 38 107 3.71e-17 80.1
MS.gene03693.t1 MTR_4g082040 38.532 109 63 4 12 118 102 208 4.43e-17 81.3
MS.gene03693.t1 MTR_4g128190 29.255 188 103 4 4 178 2 172 5.61e-17 79.0
MS.gene03693.t1 MTR_3g089045 41.228 114 63 4 4 115 5 116 1.09e-16 79.0
MS.gene03693.t1 MTR_4g105660 31.897 116 79 0 3 118 168 283 2.40e-16 79.3
MS.gene03693.t1 MTR_3g463400 35.385 130 78 5 11 136 130 257 3.27e-16 79.0
MS.gene03693.t1 MTR_5g082910 36.364 110 68 2 4 112 8 116 2.40e-15 75.1
MS.gene03693.t1 MTR_3g077650 33.333 105 68 2 15 118 181 284 2.83e-15 76.3
MS.gene03693.t1 MTR_7g086960 41.748 103 56 4 15 115 89 189 5.30e-15 74.7
MS.gene03693.t1 MTR_7g061330 38.889 108 64 2 10 116 108 214 1.63e-14 73.9
MS.gene03693.t1 MTR_7g461410 38.889 108 64 2 10 116 108 214 1.63e-14 73.9
MS.gene03693.t1 MTR_7g061330 38.889 108 64 2 10 116 72 178 1.75e-14 73.9
MS.gene03693.t1 MTR_6g027340 36.957 92 55 3 20 110 22 111 4.35e-14 70.1
MS.gene03693.t1 MTR_6g027370 37.383 107 63 4 15 119 99 203 4.53e-14 72.0
MS.gene03693.t1 MTR_5g049190 33.028 109 71 2 11 118 15 122 6.37e-14 70.5
MS.gene03693.t1 MTR_7g037260 38.028 71 44 0 48 118 178 248 1.06e-13 70.9
MS.gene03693.t1 MTR_6g027360 34.615 104 64 4 9 110 72 173 2.50e-13 69.7
MS.gene03693.t1 MTR_3g110028 43.478 69 39 0 48 116 118 186 2.86e-13 70.5
MS.gene03693.t1 MTR_7g035350 35.000 100 62 3 12 110 223 320 3.76e-13 69.7
MS.gene03693.t1 MTR_7g451170 29.703 101 71 0 15 115 191 291 4.47e-13 69.3
MS.gene03693.t1 MTR_1g026870 42.029 69 40 0 48 116 118 186 4.71e-13 70.1
MS.gene03693.t1 MTR_1g085880 37.168 113 68 3 5 114 3 115 4.90e-13 67.0
MS.gene03693.t1 MTR_1g085770 37.168 113 68 3 5 114 3 115 1.00e-12 67.8
MS.gene03693.t1 MTR_4g063100 55.102 49 22 0 70 118 1 49 1.44e-12 65.5
MS.gene03693.t1 MTR_5g007310 36.170 141 69 6 98 226 6 137 1.68e-12 66.2
MS.gene03693.t1 MTR_5g007300 37.975 79 48 1 11 88 62 140 2.08e-12 63.9
MS.gene03693.t1 MTR_6g055910 58.696 46 19 0 70 115 2 47 2.87e-12 65.1
MS.gene03693.t1 MTR_4g088015 29.245 106 75 0 9 114 215 320 4.63e-12 66.6
MS.gene03693.t1 MTR_7g037130 33.945 109 65 3 13 115 143 250 5.71e-12 65.9
MS.gene03693.t1 MTR_1g057980 29.592 98 69 0 13 110 78 175 1.48e-11 64.3
MS.gene03693.t1 MTR_5g010650 40.000 85 38 3 37 109 121 204 3.29e-11 63.9
MS.gene03693.t1 MTR_7g450950 28.682 129 90 2 9 136 151 278 3.90e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03693.t1 AT3G28470 41.212 330 143 12 1 295 1 314 1.06e-56 186
MS.gene03693.t1 AT5G56110 59.854 137 51 4 1 135 1 135 5.45e-48 163
MS.gene03693.t1 AT1G18960 34.731 334 156 12 1 299 1 307 1.19e-47 162
MS.gene03693.t1 AT4G21440 48.507 134 67 2 1 133 1 133 5.41e-40 143
MS.gene03693.t1 AT5G15310 52.713 129 59 2 1 128 1 128 9.07e-40 139
MS.gene03693.t1 AT4G17785 51.163 129 62 1 1 128 1 129 1.77e-39 141
MS.gene03693.t1 AT4G17785 51.163 129 62 1 1 128 1 129 2.28e-39 141
MS.gene03693.t1 AT3G01140 53.125 128 58 2 1 127 1 127 3.06e-39 140
MS.gene03693.t1 AT4G05100 48.062 129 66 1 1 128 1 129 3.35e-39 140
MS.gene03693.t1 AT5G15310 52.713 129 59 2 1 128 1 128 4.54e-39 139
MS.gene03693.t1 AT5G15310 52.713 129 59 2 1 128 1 128 5.28e-39 140
MS.gene03693.t1 AT1G57560 42.941 170 86 4 1 164 1 165 9.18e-39 139
MS.gene03693.t1 AT1G57560 50.000 132 64 2 1 131 1 131 1.30e-38 137
MS.gene03693.t1 AT4G28110 48.837 129 64 2 1 128 1 128 1.39e-38 137
MS.gene03693.t1 AT3G01140 52.344 128 59 2 1 127 44 170 2.72e-38 139
MS.gene03693.t1 AT1G18710 48.120 133 62 2 13 138 12 144 4.27e-38 135
MS.gene03693.t1 AT5G61420 48.800 125 63 1 7 130 6 130 8.56e-38 137
MS.gene03693.t1 AT4G34990 48.485 132 66 2 1 131 1 131 2.14e-37 134
MS.gene03693.t1 AT5G65230 48.837 129 64 2 1 128 1 128 2.63e-37 135
MS.gene03693.t1 AT5G07690 49.600 125 62 1 7 130 6 130 2.76e-37 135
MS.gene03693.t1 AT5G16770 49.612 129 63 2 1 128 1 128 2.78e-37 135
MS.gene03693.t1 AT5G16770 49.612 129 63 2 1 128 1 128 2.78e-37 135
MS.gene03693.t1 AT4G01680 48.872 133 66 2 1 132 1 132 3.04e-37 133
MS.gene03693.t1 AT1G74430 51.282 117 56 1 13 128 12 128 3.56e-37 133
MS.gene03693.t1 AT5G26660 50.769 130 62 2 1 129 1 129 3.68e-37 135
MS.gene03693.t1 AT5G16770 49.612 129 63 2 1 128 1 128 4.16e-37 135
MS.gene03693.t1 AT5G16770 49.612 129 63 2 1 128 1 128 4.16e-37 135
MS.gene03693.t1 AT1G09540 50.376 133 64 2 1 132 1 132 6.55e-37 135
MS.gene03693.t1 AT1G18570 48.092 131 67 1 1 130 1 131 7.33e-37 135
MS.gene03693.t1 AT5G10280 36.150 213 120 4 5 211 4 206 7.56e-37 134
MS.gene03693.t1 AT5G60890 48.462 130 65 2 1 129 1 129 9.39e-37 133
MS.gene03693.t1 AT4G01680 48.872 133 66 2 1 132 1 132 9.71e-37 134
MS.gene03693.t1 AT3G02940 48.837 129 64 2 1 128 1 128 1.17e-36 133
MS.gene03693.t1 AT3G02940 48.837 129 64 2 1 128 1 128 1.44e-36 133
MS.gene03693.t1 AT3G02940 48.837 129 64 2 1 128 1 128 1.44e-36 133
MS.gene03693.t1 AT1G34670 48.148 135 68 2 1 134 1 134 1.80e-36 134
MS.gene03693.t1 AT1G66230 48.092 131 66 2 1 130 1 130 2.39e-36 132
MS.gene03693.t1 AT5G07700 50.420 119 58 1 13 130 12 130 3.10e-36 132
MS.gene03693.t1 AT5G07700 50.420 119 58 1 13 130 12 130 3.10e-36 132
MS.gene03693.t1 AT3G13540 48.438 128 65 1 3 129 13 140 6.74e-36 129
MS.gene03693.t1 AT4G12350 46.324 136 71 2 1 135 1 135 9.28e-36 130
MS.gene03693.t1 AT5G54230 49.180 122 61 1 13 133 12 133 3.25e-35 129
MS.gene03693.t1 AT4G22680 46.212 132 69 2 1 131 1 131 5.60e-35 127
MS.gene03693.t1 AT4G38620 46.154 130 68 2 1 129 1 129 6.06e-35 128
MS.gene03693.t1 AT2G16720 46.875 128 66 2 1 127 1 127 1.34e-34 127
MS.gene03693.t1 AT5G16600 42.169 166 94 2 1 165 1 165 1.59e-34 128
MS.gene03693.t1 AT1G35515 48.031 127 64 2 1 126 1 126 6.36e-34 123
MS.gene03693.t1 AT1G74080 45.385 130 69 2 1 129 1 129 7.40e-34 126
MS.gene03693.t1 AT3G61250 46.154 130 68 2 1 129 1 129 9.70e-34 125
MS.gene03693.t1 AT5G14340 46.617 133 69 2 1 132 13 144 1.81e-33 124
MS.gene03693.t1 AT4G01680 44.828 145 66 3 1 132 1 144 1.96e-33 125
MS.gene03693.t1 AT1G22640 45.312 128 68 2 1 127 1 127 2.40e-33 123
MS.gene03693.t1 AT5G14750 50.427 117 57 1 2 117 5 121 3.17e-33 121
MS.gene03693.t1 AT4G09460 46.094 128 67 2 1 127 1 127 5.28e-33 121
MS.gene03693.t1 AT4G37780 52.542 118 53 3 1 116 1 117 8.21e-33 123
MS.gene03693.t1 AT5G62320 43.796 137 68 3 3 131 4 139 1.68e-32 120
MS.gene03693.t1 AT3G49690 52.542 118 53 3 1 116 1 117 1.09e-31 120
MS.gene03693.t1 AT3G27920 47.414 116 60 1 2 116 3 118 2.85e-31 117
MS.gene03693.t1 AT5G40330 51.429 105 50 1 14 117 13 117 4.24e-31 116
MS.gene03693.t1 AT5G23000 55.000 120 47 6 1 116 1 117 4.81e-31 119
MS.gene03693.t1 AT5G57620 50.847 118 55 3 1 116 1 117 5.57e-31 119
MS.gene03693.t1 AT3G12720 47.107 121 62 2 7 126 17 136 1.12e-30 117
MS.gene03693.t1 AT2G36890 49.612 129 60 5 1 126 1 127 1.30e-30 117
MS.gene03693.t1 AT5G52600 44.275 131 63 2 8 128 7 137 1.95e-30 114
MS.gene03693.t1 AT2G36890 49.612 129 60 5 1 126 42 168 2.72e-30 117
MS.gene03693.t1 AT1G79180 51.282 117 55 2 3 118 5 120 2.85e-30 116
MS.gene03693.t1 AT5G65790 50.000 118 56 3 1 116 1 117 3.34e-30 117
MS.gene03693.t1 AT3G23250 49.573 117 57 2 1 116 1 116 3.70e-30 115
MS.gene03693.t1 AT1G16490 50.000 116 56 2 3 117 5 119 5.37e-30 114
MS.gene03693.t1 AT2G47460 44.776 134 72 2 1 133 1 133 1.41e-29 115
MS.gene03693.t1 AT5G26660 54.839 93 42 0 37 129 6 98 1.50e-29 114
MS.gene03693.t1 AT3G47600 49.167 120 59 2 1 119 1 119 1.98e-29 114
MS.gene03693.t1 AT3G62610 48.718 117 58 2 1 116 1 116 3.01e-29 114
MS.gene03693.t1 AT5G62470 50.000 120 58 2 1 119 1 119 3.15e-29 114
MS.gene03693.t1 AT3G28910 47.967 123 62 2 1 122 1 122 3.21e-29 114
MS.gene03693.t1 AT1G63910 42.742 124 70 1 6 128 5 128 4.09e-29 114
MS.gene03693.t1 AT4G26930 49.038 104 52 1 12 114 18 121 4.26e-29 114
MS.gene03693.t1 AT3G13890 47.863 117 59 2 1 116 1 116 1.11e-28 113
MS.gene03693.t1 AT5G55020 48.148 108 55 1 12 118 25 132 1.20e-28 115
MS.gene03693.t1 AT1G56160 48.276 116 58 2 3 117 5 119 1.54e-28 111
MS.gene03693.t1 AT2G31180 47.899 119 60 2 1 118 1 118 1.62e-28 110
MS.gene03693.t1 AT5G49330 47.863 117 59 2 1 116 1 116 1.80e-28 112
MS.gene03693.t1 AT3G12820 47.826 115 59 1 3 116 4 118 2.52e-28 109
MS.gene03693.t1 AT1G74650 49.167 120 59 2 1 119 1 119 3.74e-28 111
MS.gene03693.t1 AT1G06180 47.059 119 61 2 1 118 1 118 3.76e-28 109
MS.gene03693.t1 AT5G35550 41.739 115 66 1 3 116 4 118 1.27e-27 108
MS.gene03693.t1 AT1G08810 47.899 119 60 2 1 118 1 118 1.59e-27 108
MS.gene03693.t1 AT5G62470 50.000 120 57 3 1 119 1 118 3.27e-27 108
MS.gene03693.t1 AT3G11440 44.444 108 59 1 9 115 37 144 1.06e-26 109
MS.gene03693.t1 AT5G12870 42.735 117 66 1 4 119 9 125 1.08e-26 106
MS.gene03693.t1 AT3G11440 44.444 108 59 1 9 115 37 144 2.52e-26 108
MS.gene03693.t1 AT3G11440 44.444 108 59 1 9 115 37 144 2.52e-26 108
MS.gene03693.t1 AT3G11440 44.444 108 59 1 9 115 37 144 2.52e-26 108
MS.gene03693.t1 AT2G32460 45.192 104 56 1 13 115 18 121 5.15e-26 107
MS.gene03693.t1 AT2G32460 45.192 104 56 1 13 115 6 109 5.29e-26 107
MS.gene03693.t1 AT2G47190 41.667 120 69 1 4 122 11 130 7.04e-26 103
MS.gene03693.t1 AT3G13890 44.444 126 59 3 1 116 1 125 8.31e-26 105
MS.gene03693.t1 AT5G06100 45.714 105 56 1 12 115 31 135 2.42e-25 105
MS.gene03693.t1 AT1G25340 41.322 121 70 1 8 127 13 133 4.41e-25 102
MS.gene03693.t1 AT5G06100 45.714 105 56 1 12 115 31 135 5.43e-25 104
MS.gene03693.t1 AT5G06100 45.714 105 56 1 12 115 31 135 5.43e-25 104
MS.gene03693.t1 AT5G06100 45.714 105 56 1 12 115 31 135 5.43e-25 104
MS.gene03693.t1 AT5G06100 45.714 105 56 1 12 115 31 135 5.43e-25 104
MS.gene03693.t1 AT3G01530 42.105 114 65 1 4 116 16 129 5.71e-25 99.8
MS.gene03693.t1 AT1G48000 42.623 122 68 2 13 133 32 152 8.86e-25 100
MS.gene03693.t1 AT4G25560 45.631 103 55 1 14 115 11 113 1.23e-24 100
MS.gene03693.t1 AT2G26960 41.803 122 66 3 4 121 8 128 1.35e-24 102
MS.gene03693.t1 AT1G68320 41.322 121 70 1 13 132 19 139 1.59e-24 100
MS.gene03693.t1 AT1G79180 40.000 150 55 3 3 118 5 153 2.46e-24 100
MS.gene03693.t1 AT4G13480 47.619 105 54 1 12 115 5 109 3.79e-24 99.0
MS.gene03693.t1 AT3G24310 46.602 103 54 1 14 115 19 121 1.62e-23 97.4
MS.gene03693.t1 AT3G08500 44.762 105 57 1 13 116 30 134 1.76e-23 98.6
MS.gene03693.t1 AT3G27810 42.056 107 61 1 13 118 20 126 2.91e-23 95.9
MS.gene03693.t1 AT5G40350 42.202 109 62 1 13 120 17 125 3.25e-23 95.5
MS.gene03693.t1 AT5G14750 56.410 78 31 1 40 117 13 87 4.37e-23 93.6
MS.gene03693.t1 AT1G66370 45.192 104 56 1 13 115 8 111 6.97e-23 95.1
MS.gene03693.t1 AT3G48920 40.952 105 61 1 14 117 19 123 8.47e-23 95.5
MS.gene03693.t1 AT1G71030 51.899 79 38 0 49 127 3 81 1.31e-22 92.8
MS.gene03693.t1 AT1G71030 51.899 79 38 0 49 127 17 95 1.42e-22 93.2
MS.gene03693.t1 AT5G59780 45.631 103 55 1 14 115 9 111 3.89e-22 92.8
MS.gene03693.t1 AT3G30210 42.718 103 58 1 13 114 27 129 3.95e-22 94.0
MS.gene03693.t1 AT5G35550 54.167 72 33 0 45 116 50 121 6.32e-22 92.8
MS.gene03693.t1 AT5G52260 44.660 103 56 1 14 115 13 115 6.66e-22 93.2
MS.gene03693.t1 AT3G46130 44.660 103 56 1 14 115 10 112 1.39e-21 92.0
MS.gene03693.t1 AT5G59780 47.826 92 43 1 27 118 7 93 2.62e-21 90.1
MS.gene03693.t1 AT3G53200 39.568 139 73 4 9 145 5 134 6.73e-21 89.7
MS.gene03693.t1 AT1G25340 38.843 121 68 2 8 127 13 128 1.62e-20 89.4
MS.gene03693.t1 AT3G47600 45.545 101 49 2 25 119 13 113 2.50e-20 89.7
MS.gene03693.t1 AT1G25340 38.843 121 68 2 8 127 13 128 2.98e-20 89.4
MS.gene03693.t1 AT3G06490 40.164 122 72 1 2 122 8 129 3.84e-20 89.4
MS.gene03693.t1 AT3G46130 51.220 82 39 1 44 125 9 89 5.12e-20 87.0
MS.gene03693.t1 AT3G46130 51.316 76 37 0 43 118 18 93 5.16e-20 87.0
MS.gene03693.t1 AT2G26950 36.090 133 80 3 21 149 25 156 7.76e-20 89.0
MS.gene03693.t1 AT1G66380 46.154 104 55 1 13 115 8 111 8.30e-20 84.0
MS.gene03693.t1 AT3G12820 56.522 69 30 0 48 116 2 70 9.74e-20 85.5
MS.gene03693.t1 AT3G27810 50.000 74 37 0 45 118 4 77 1.92e-19 84.3
MS.gene03693.t1 AT5G49620 41.441 111 64 1 13 122 26 136 2.36e-19 86.7
MS.gene03693.t1 AT1G22640 56.897 58 25 0 70 127 13 70 3.72e-19 84.0
MS.gene03693.t1 AT5G40350 50.000 76 38 0 45 120 5 80 4.24e-19 83.2
MS.gene03693.t1 AT1G69560 37.500 120 71 4 1 118 93 210 6.82e-19 85.9
MS.gene03693.t1 AT1G69560 37.500 120 71 4 1 118 109 226 7.28e-19 85.9
MS.gene03693.t1 AT1G26780 41.284 109 60 4 12 118 95 201 8.96e-19 84.7
MS.gene03693.t1 AT3G60460 40.741 108 62 2 9 114 7 114 1.34e-18 84.3
MS.gene03693.t1 AT1G26780 41.284 109 60 4 12 118 95 201 1.74e-18 85.1
MS.gene03693.t1 AT3G53200 41.837 98 49 1 43 140 7 96 2.82e-18 81.6
MS.gene03693.t1 AT2G23290 43.299 97 54 1 21 117 20 115 2.84e-18 83.6
MS.gene03693.t1 AT3G29020 38.532 109 63 4 12 118 62 168 5.23e-18 81.6
MS.gene03693.t1 AT1G56650 40.496 121 61 2 13 132 8 118 8.08e-18 81.3
MS.gene03693.t1 AT1G17950 41.509 106 58 4 12 115 2 105 1.08e-17 81.3
MS.gene03693.t1 AT4G37260 33.939 165 94 5 4 166 2 153 1.86e-17 81.6
MS.gene03693.t1 AT1G66390 43.269 104 58 1 13 115 8 111 2.10e-17 80.5
MS.gene03693.t1 AT3G29020 38.532 109 63 4 12 118 64 170 2.14e-17 81.3
MS.gene03693.t1 AT5G61420 64.000 50 18 0 81 130 2 51 4.10e-17 80.1
MS.gene03693.t1 AT5G67300 36.000 125 74 4 15 134 6 129 5.88e-17 80.1
MS.gene03693.t1 AT2G39880 51.389 72 33 2 48 118 83 153 8.12e-17 80.1
MS.gene03693.t1 AT5G14750 66.667 48 16 0 70 117 13 60 8.37e-17 76.3
MS.gene03693.t1 AT5G14750 66.667 48 16 0 70 117 13 60 8.37e-17 76.3
MS.gene03693.t1 AT5G17800 37.931 116 68 4 2 115 80 193 1.11e-16 79.3
MS.gene03693.t1 AT1G73410 43.396 106 56 4 15 118 6 109 1.62e-16 77.0
MS.gene03693.t1 AT1G73410 43.396 106 56 4 15 118 6 109 1.95e-16 77.4
MS.gene03693.t1 AT3G55730 39.815 108 59 5 15 119 56 160 2.60e-16 79.0
MS.gene03693.t1 AT3G50060 39.423 104 61 2 15 117 6 108 3.67e-16 77.8
MS.gene03693.t1 AT3G27785 34.454 119 76 2 1 118 175 292 4.69e-16 78.6
MS.gene03693.t1 AT1G66380 55.556 72 32 0 44 115 7 78 4.82e-16 72.8
MS.gene03693.t1 AT5G49620 36.800 125 64 2 13 122 26 150 5.70e-16 77.4
MS.gene03693.t1 AT3G09230 46.377 69 37 0 48 116 88 156 1.18e-15 77.0
MS.gene03693.t1 AT5G02320 39.815 108 63 2 10 116 122 228 1.19e-15 77.4
MS.gene03693.t1 AT5G02320 39.815 108 63 2 10 116 122 228 1.19e-15 77.4
MS.gene03693.t1 AT5G02320 39.815 108 63 2 10 116 62 168 1.56e-15 77.0
MS.gene03693.t1 AT4G18770 29.688 128 88 1 9 136 211 336 4.08e-15 75.5
MS.gene03693.t1 AT5G11050 35.514 107 67 2 13 118 103 208 1.19e-14 74.3
MS.gene03693.t1 AT5G58850 35.238 105 66 2 15 118 105 208 1.20e-14 74.3
MS.gene03693.t1 AT3G09370 38.235 102 61 2 15 115 143 243 1.26e-14 74.3
MS.gene03693.t1 AT3G09370 38.235 102 61 2 15 115 135 235 1.38e-14 74.3
MS.gene03693.t1 AT3G09370 38.235 102 61 2 15 115 130 230 1.59e-14 73.9
MS.gene03693.t1 AT5G40360 32.407 108 71 2 8 114 151 257 1.71e-14 73.6
MS.gene03693.t1 AT5G15310 73.171 41 11 0 88 128 9 49 2.08e-14 72.0
MS.gene03693.t1 AT2G25230 33.858 127 80 3 1 124 12 137 2.26e-14 71.6
MS.gene03693.t1 AT3G23250 61.702 47 18 0 70 116 13 59 4.40e-14 70.5
MS.gene03693.t1 AT4G33450 38.532 109 63 4 9 115 13 119 4.60e-14 70.9
MS.gene03693.t1 AT4G28110 65.854 41 14 0 88 128 4 44 6.69e-14 69.7
MS.gene03693.t1 AT1G74430 61.905 42 16 0 87 128 18 59 7.62e-14 69.3
MS.gene03693.t1 AT5G11510 42.029 69 40 0 48 116 114 182 1.84e-13 71.2
MS.gene03693.t1 AT5G11510 42.029 69 40 0 48 116 114 182 2.01e-13 71.2
MS.gene03693.t1 AT5G11510 42.029 69 40 0 48 116 114 182 2.01e-13 71.2
MS.gene03693.t1 AT5G11510 42.029 69 40 0 48 116 114 182 2.01e-13 71.2
MS.gene03693.t1 AT5G11510 42.029 69 40 0 48 116 114 182 2.07e-13 70.9
MS.gene03693.t1 AT5G14340 50.943 53 25 1 81 132 2 54 2.78e-13 67.4
MS.gene03693.t1 AT5G59780 55.102 49 22 0 70 118 1 49 1.27e-12 65.5
MS.gene03693.t1 AT3G46130 53.571 56 25 1 70 125 1 55 1.77e-12 65.5
MS.gene03693.t1 AT4G00540 41.667 72 42 0 48 119 139 210 3.26e-12 67.0
MS.gene03693.t1 AT4G32730 40.580 69 41 0 48 116 120 188 3.49e-12 67.4
MS.gene03693.t1 AT4G32730 40.580 69 41 0 48 116 120 188 3.49e-12 67.4
MS.gene03693.t1 AT4G32730 40.580 69 41 0 48 116 120 188 3.49e-12 67.4
MS.gene03693.t1 AT4G32730 40.580 69 41 0 48 116 120 188 3.49e-12 67.4
MS.gene03693.t1 AT4G32730 40.580 69 41 0 48 116 120 188 3.60e-12 67.4
MS.gene03693.t1 AT4G00540 41.667 72 42 0 48 119 137 208 4.18e-12 66.6
MS.gene03693.t1 AT1G22640 62.500 40 15 0 88 127 16 55 8.59e-12 63.2
MS.gene03693.t1 AT5G39700 34.862 109 67 4 8 114 49 155 6.92e-11 60.8
MS.gene03693.t1 AT5G40430 35.616 73 47 0 48 120 86 158 8.94e-11 61.6

Find 46 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCATAACTGTTTCCATTT+TGG 0.092201 3.4:+35893113 None:intergenic
TCTAAACTCATTGCTGATTA+TGG 0.130701 3.4:-35893228 MS.gene03693:CDS
TAATCCAACATCAATGTTTA+TGG 0.159625 3.4:-35893031 MS.gene03693:CDS
CTAAAATTTGTTGTTCTTGC+AGG 0.216669 3.4:+35892881 None:intergenic
TGTTGGATTATTATTATTAC+TGG 0.243760 3.4:+35893044 None:intergenic
GAGAAAGGCTTGTGAGTAAC+AGG 0.271065 3.4:+35893249 None:intergenic
TAACGATTAGATCTTCTTCT+TGG 0.278556 3.4:+35893400 None:intergenic
TCTAAGCTTTCCCGAACTTT+TGG 0.281516 3.4:-35892758 MS.gene03693:CDS
AAAGCAATTGCCACCCAAAA+TGG 0.287493 3.4:-35893127 MS.gene03693:CDS
AGAAAGTCATTCCAACTAAA+TGG 0.304797 3.4:+35892943 None:intergenic
GTCATATTAATCAAGACTTT+AGG 0.329393 3.4:-35893185 MS.gene03693:CDS
ATCATAGCTCAACAACTTCC+TGG 0.362064 3.4:-35893345 MS.gene03693:CDS
TGTTCTTGCAGGTTATTAGT+AGG 0.374223 3.4:+35892892 None:intergenic
ATTGCTGATTATGGAAATAT+AGG 0.383788 3.4:-35893219 MS.gene03693:CDS
GGATGGTTCCTCCAAAAGTT+CGG 0.386068 3.4:+35892747 None:intergenic
GATGGTTCCTCCAAAAGTTC+GGG 0.391981 3.4:+35892748 None:intergenic
ACAATGATGTTAAGAACAAT+TGG 0.395885 3.4:-35893314 MS.gene03693:CDS
TTAACAGGTGTTAAGAGGTA+TGG 0.406926 3.4:-35893489 MS.gene03693:intron
GTTTCTTGTGTTGAAGGTAA+TGG 0.419625 3.4:+35892979 None:intergenic
AACGATTAGATCTTCTTCTT+GGG 0.424842 3.4:+35893401 None:intergenic
AAGTTTGTTTCTTGTGTTGA+AGG 0.448562 3.4:+35892973 None:intergenic
CCTTCATTTGCCTCAGAACA+TGG 0.456576 3.4:-35894251 MS.gene03693:CDS
TTAGGAATCAAAGATTGATC+AGG 0.466418 3.4:-35893167 MS.gene03693:CDS
GCTTCCATAAACATTGATGT+TGG 0.470876 3.4:+35893027 None:intergenic
TGGGTGGCAATTGCTTTGAT+AGG 0.480894 3.4:+35893133 None:intergenic
GTGTCATCAAAAGAGGTGTA+TGG 0.486661 3.4:-35894295 MS.gene03693:CDS
GTGAACTTATCATCATGCTT+AGG 0.502782 3.4:+35893426 None:intergenic
GATAGACCACCTACTACCTA+TGG 0.517239 3.4:+35893365 None:intergenic
TGAACTGATTAGTAATTGGA+TGG 0.519558 3.4:+35892730 None:intergenic
CCATGTTCTGAGGCAAATGA+AGG 0.535126 3.4:+35894251 None:intergenic
ACATCATTGTCTGTTCTCCC+AGG 0.541477 3.4:+35893327 None:intergenic
TCAGCAATGAGTTTAGAGAA+AGG 0.549669 3.4:+35893234 None:intergenic
TGGATTGTTATCAAAGAAAG+AGG 0.553257 3.4:-35892857 MS.gene03693:CDS
TCATAGCTCAACAACTTCCT+GGG 0.565623 3.4:-35893344 MS.gene03693:CDS
TTCATGCAGCCATAGGTAGT+AGG 0.572814 3.4:-35893374 MS.gene03693:CDS
GTTAAGCTTCATGCAGCCAT+AGG 0.575069 3.4:-35893381 MS.gene03693:CDS
ATCATGCTTAGGATCAAGCA+TGG 0.606048 3.4:+35893437 None:intergenic
AAAAGAAGCTTTCTCAAATG+GGG 0.633115 3.4:-35893278 MS.gene03693:CDS
ATTAACAGATCCATGTTCTG+AGG 0.633527 3.4:+35894241 None:intergenic
ATGGATTGCAGAAGATGCAA+AGG 0.638505 3.4:-35894276 MS.gene03693:CDS
TATTAGCAGAAAACATGGTG+AGG 0.644952 3.4:-35894340 None:intergenic
ATGCAGCCATAGGTAGTAGG+TGG 0.657431 3.4:-35893371 MS.gene03693:CDS
TGTCTGAGGATGATGAGACT+TGG 0.667702 3.4:+35892824 None:intergenic
CTCTACGAATGAAATGTCTG+AGG 0.670182 3.4:+35892810 None:intergenic
GCTGATTATGGAAATATAGG+TGG 0.681369 3.4:-35893216 MS.gene03693:CDS
AGAAAGGCTTGTGAGTAACA+GGG 0.701057 3.4:+35893250 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTACACATGAATATA+AGG - chr3.4:35893165-35893184 MS.gene03693:CDS 15.0%
!!! AAGAATATGTTTTTATTAAC+AGG - chr3.4:35893560-35893579 MS.gene03693:intron 15.0%
!!! ATCTATATTTTTAGCAAATT+TGG + chr3.4:35893091-35893110 None:intergenic 15.0%
!! TGTTGGATTATTATTATTAC+TGG + chr3.4:35894023-35894042 None:intergenic 20.0%
!!! AAATTGATTTTGATTGCATT+AGG - chr3.4:35893289-35893308 MS.gene03693:CDS 20.0%
!!! ATATTTTTAGCAAATTTGGT+TGG + chr3.4:35893087-35893106 None:intergenic 20.0%
!!! CATTTTCTATTTTTGTCATT+GGG + chr3.4:35893997-35894016 None:intergenic 20.0%
!!! TCATTTTCTATTTTTGTCAT+TGG + chr3.4:35893998-35894017 None:intergenic 20.0%
!!! TTATTATCTTTTCCATCTTA+TGG - chr3.4:35892927-35892946 MS.gene03693:CDS 20.0%
! AAAAAGAAGCTTTCTCAAAT+GGG - chr3.4:35893785-35893804 MS.gene03693:intron 25.0%
! AAAAATAGTGTCATCAAAAG+AGG - chr3.4:35892762-35892781 MS.gene03693:CDS 25.0%
! AAAACAAAGAAACCATAAGA+TGG + chr3.4:35892942-35892961 None:intergenic 25.0%
! ACAATGATGTTAAGAACAAT+TGG - chr3.4:35893750-35893769 MS.gene03693:intron 25.0%
! GTCATATTAATCAAGACTTT+AGG - chr3.4:35893879-35893898 MS.gene03693:intron 25.0%
! TAATCCAACATCAATGTTTA+TGG - chr3.4:35894033-35894052 MS.gene03693:intron 25.0%
! TCAAAGTAACTAATGTTTCT+AGG + chr3.4:35893265-35893284 None:intergenic 25.0%
!! AGAAACATTAGTTACTTTGA+AGG - chr3.4:35893265-35893284 MS.gene03693:CDS 25.0%
!! ATTCATAACTGTTTCCATTT+TGG + chr3.4:35893954-35893973 None:intergenic 25.0%
!! ATTGCTGATTATGGAAATAT+AGG - chr3.4:35893845-35893864 MS.gene03693:intron 25.0%
!! TTCATAACTGTTTCCATTTT+GGG + chr3.4:35893953-35893972 None:intergenic 25.0%
!! TTTTATTAACAGGTGTTAAG+AGG - chr3.4:35893570-35893589 MS.gene03693:intron 25.0%
AAAAGAAGCTTTCTCAAATG+GGG - chr3.4:35893786-35893805 MS.gene03693:intron 30.0%
AACGATTAGATCTTCTTCTT+GGG + chr3.4:35893666-35893685 None:intergenic 30.0%
AGAAAGTCATTCCAACTAAA+TGG + chr3.4:35894124-35894143 None:intergenic 30.0%
GAAAAAGAAGCTTTCTCAAA+TGG - chr3.4:35893784-35893803 MS.gene03693:intron 30.0%
TAACGATTAGATCTTCTTCT+TGG + chr3.4:35893667-35893686 None:intergenic 30.0%
TGGATTGTTATCAAAGAAAG+AGG - chr3.4:35894207-35894226 MS.gene03693:intron 30.0%
TTAGGAATCAAAGATTGATC+AGG - chr3.4:35893897-35893916 MS.gene03693:intron 30.0%
! AAGTTTGTTTCTTGTGTTGA+AGG + chr3.4:35894094-35894113 None:intergenic 30.0%
! CAAGAACAACAAATTTTAGG+TGG - chr3.4:35894187-35894206 MS.gene03693:intron 30.0%
! CTGCAAGAACAACAAATTTT+AGG - chr3.4:35894184-35894203 MS.gene03693:intron 30.0%
! TCTAAACTCATTGCTGATTA+TGG - chr3.4:35893836-35893855 MS.gene03693:intron 30.0%
!! CAGTAAAGTTGATGAATACA+TGG - chr3.4:35893525-35893544 MS.gene03693:intron 30.0%
!! CTAAAATTTGTTGTTCTTGC+AGG + chr3.4:35894186-35894205 None:intergenic 30.0%
!!! AGTCTCTAACCTGTTTTTTT+AGG + chr3.4:35892861-35892880 None:intergenic 30.0%
!!! GTCTCTAACCTGTTTTTTTA+GGG + chr3.4:35892860-35892879 None:intergenic 30.0%
!!! TTCTATTTTTGTCATTGGGA+TGG + chr3.4:35893993-35894012 None:intergenic 30.0%
AATGAAGCAGAGATACTTCT+CGG + chr3.4:35893464-35893483 None:intergenic 35.0%
AATGTTAGGTTTACGAGGAT+TGG + chr3.4:35893236-35893255 None:intergenic 35.0%
ACACATGAATATAAGGCAAG+CGG - chr3.4:35893172-35893191 MS.gene03693:CDS 35.0%
ACTTCTGTCCCTAAAAAAAC+AGG - chr3.4:35892849-35892868 MS.gene03693:CDS 35.0%
ATTAACAGATCCATGTTCTG+AGG + chr3.4:35892826-35892845 None:intergenic 35.0%
GCTGATTATGGAAATATAGG+TGG - chr3.4:35893848-35893867 MS.gene03693:intron 35.0%
GCTTCCATAAACATTGATGT+TGG + chr3.4:35894040-35894059 None:intergenic 35.0%
GTGAACTTATCATCATGCTT+AGG + chr3.4:35893641-35893660 None:intergenic 35.0%
GTTTCTTGTGTTGAAGGTAA+TGG + chr3.4:35894088-35894107 None:intergenic 35.0%
TCAGCAATGAGTTTAGAGAA+AGG + chr3.4:35893833-35893852 None:intergenic 35.0%
TGTTCTTGCAGGTTATTAGT+AGG + chr3.4:35894175-35894194 None:intergenic 35.0%
TTAACAGGTGTTAAGAGGTA+TGG - chr3.4:35893575-35893594 MS.gene03693:intron 35.0%
TTTCTAGGTCCATGAATGTT+AGG + chr3.4:35893250-35893269 None:intergenic 35.0%
! ACTTTTCTGCACCATTTAGT+TGG - chr3.4:35894110-35894129 MS.gene03693:intron 35.0%
! ATAACTGTTTCCATTTTGGG+TGG + chr3.4:35893950-35893969 None:intergenic 35.0%
! CTCATTTTCTTGATCGAGTA+TGG + chr3.4:35894281-35894300 None:intergenic 35.0%
! TAGGTTGAAAAGTTTGCATC+AGG - chr3.4:35893308-35893327 MS.gene03693:CDS 35.0%
! TTTTTGTCATTGGGATGGTT+TGG + chr3.4:35893988-35894007 None:intergenic 35.0%
!!! ATTGGTTTTGCCGTTCAAAA+AGG + chr3.4:35893218-35893237 None:intergenic 35.0%
AAAGCAATTGCCACCCAAAA+TGG - chr3.4:35893937-35893956 MS.gene03693:intron 40.0%
AGAAAGGCTTGTGAGTAACA+GGG + chr3.4:35893817-35893836 None:intergenic 40.0%
ATCATAGCTCAACAACTTCC+TGG - chr3.4:35893719-35893738 MS.gene03693:intron 40.0%
ATCATGCTTAGGATCAAGCA+TGG + chr3.4:35893630-35893649 None:intergenic 40.0%
ATGGAAAAAGTTGCAGGCTT+AGG - chr3.4:35893594-35893613 MS.gene03693:intron 40.0%
CCATGAATGTTAGGTTTACG+AGG + chr3.4:35893241-35893260 None:intergenic 40.0%
CCTCGTAAACCTAACATTCA+TGG - chr3.4:35893238-35893257 MS.gene03693:CDS 40.0%
CTCTACGAATGAAATGTCTG+AGG + chr3.4:35894257-35894276 None:intergenic 40.0%
GCAAATTTGGTTGGACAGAA+AGG + chr3.4:35893078-35893097 None:intergenic 40.0%
TCATAGCTCAACAACTTCCT+GGG - chr3.4:35893720-35893739 MS.gene03693:intron 40.0%
! AGAGGTATGGAAAAAGTTGC+AGG - chr3.4:35893588-35893607 MS.gene03693:intron 40.0%
! ATGGATTGCAGAAGATGCAA+AGG - chr3.4:35892788-35892807 MS.gene03693:CDS 40.0%
! GTGTCATCAAAAGAGGTGTA+TGG - chr3.4:35892769-35892788 MS.gene03693:CDS 40.0%
! TCTAAGCTTTCCCGAACTTT+TGG - chr3.4:35894306-35894325 MS.gene03693:CDS 40.0%
ACATCATTGTCTGTTCTCCC+AGG + chr3.4:35893740-35893759 None:intergenic 45.0%
CCTTCATTTGCCTCAGAACA+TGG - chr3.4:35892813-35892832 MS.gene03693:CDS 45.0%
GAAAAAGTTGCAGGCTTAGG+TGG - chr3.4:35893597-35893616 MS.gene03693:intron 45.0%
GAGAAAGGCTTGTGAGTAAC+AGG + chr3.4:35893818-35893837 None:intergenic 45.0%
GATAGACCACCTACTACCTA+TGG + chr3.4:35893702-35893721 None:intergenic 45.0%
GATGGTTCCTCCAAAAGTTC+GGG + chr3.4:35894319-35894338 None:intergenic 45.0%
GCAGAGATACTTCTCGGATT+AGG + chr3.4:35893458-35893477 None:intergenic 45.0%
GGATGGTTCCTCCAAAAGTT+CGG + chr3.4:35894320-35894339 None:intergenic 45.0%
GTTAAGCTTCATGCAGCCAT+AGG - chr3.4:35893683-35893702 MS.gene03693:intron 45.0%
TGGGTGGCAATTGCTTTGAT+AGG + chr3.4:35893934-35893953 None:intergenic 45.0%
TGTCTGAGGATGATGAGACT+TGG + chr3.4:35894243-35894262 None:intergenic 45.0%
TTCATGCAGCCATAGGTAGT+AGG - chr3.4:35893690-35893709 MS.gene03693:intron 45.0%
! AAGCTTTCCCGAACTTTTGG+AGG - chr3.4:35894309-35894328 MS.gene03693:CDS 45.0%
!! CCATGTTCTGAGGCAAATGA+AGG + chr3.4:35892816-35892835 None:intergenic 45.0%
ATGCAGCCATAGGTAGTAGG+TGG - chr3.4:35893693-35893712 MS.gene03693:intron 50.0%
GATTAGGCGTCTCTCAGTGT+CGG + chr3.4:35893442-35893461 None:intergenic 50.0%
TGCCGTTCAAAAAGGCCTAG+CGG + chr3.4:35893210-35893229 None:intergenic 50.0%
CACCAGACACGACACAGATG+TGG - chr3.4:35893370-35893389 MS.gene03693:CDS 55.0%
GTCCACATCTGTGTCGTGTC+TGG + chr3.4:35893375-35893394 None:intergenic 55.0%
! CGCCGCTAGGCCTTTTTGAA+CGG - chr3.4:35893205-35893224 MS.gene03693:CDS 55.0%
CGGACAACAAGCTCGCCGCT+AGG - chr3.4:35893192-35893211 MS.gene03693:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 35892738 35894348 35892738 ID=MS.gene03693
chr3.4 mRNA 35892738 35894348 35892738 ID=MS.gene03693.t1;Parent=MS.gene03693
chr3.4 exon 35894216 35894348 35894216 ID=MS.gene03693.t1.exon1;Parent=MS.gene03693.t1
chr3.4 CDS 35894216 35894348 35894216 ID=cds.MS.gene03693.t1;Parent=MS.gene03693.t1
chr3.4 exon 35892738 35893504 35892738 ID=MS.gene03693.t1.exon2;Parent=MS.gene03693.t1
chr3.4 CDS 35892738 35893504 35892738 ID=cds.MS.gene03693.t1;Parent=MS.gene03693.t1
Gene Sequence

>MS.gene03693

ATGGTGAGGTCTTCAAGTTGTGAAAAAAATAGTGTCATCAAAAGAGGTGTATGGATTGCAGAAGATGCAAAGGCACCTTCATTTGCCTCAGAACATGGATCTGTTAATTTGACTTCTGTCCCTAAAAAAACAGGTTAGAGACTTGTTTCTTTTTCAATAAAATATTTACTATATTGTTAACATGAAAAATTATTATCTTTTCCATCTTATGGTTTCTTTGTTTTTCTCATTACTCATATTCTTTTTTCTTAGTAATTTTTATCTCACACAGATAAGTTTCATCTCATTCTTGAATGTATGTTTGATTCTAAGTGAGAGAATGTCACAGTTGATTTCACCTTTCTGTCCAACCAAATTTGCTAAAAATATAGATGTTTAGTTTTTTTTTTTATAACAATAATATTAATTAAAAATATATATAAGATGATTAAATTACACATGAATATAAGGCAAGCGGACAACAAGCTCGCCGCTAGGCCTTTTTGAACGGCAAAACCAATCCTCGTAAACCTAACATTCATGGACCTAGAAACATTAGTTACTTTGAAGGCAAATTGATTTTGATTGCATTAGGTTGAAAAGTTTGCATCAGGTTTTACTTCAATTTTAACATAATCACTATGAATCACGAACACCAGACACGACACAGATGTGGACACGTTGACACTGCTAATGTCATAAACATAAACATCGATGTGTGTCCGACACTGAGAGACGCCTAATCCGAGAAGTATCTCTGCTTCATTGATAATCAATTTTACAAAATTTAAGTTTATTCAAAATGACACAGTAAAGTTGATGAATACATGGATTGAATTTGATAAGAATATGTTTTTATTAACAGGTGTTAAGAGGTATGGAAAAAGTTGCAGGCTTAGGTGGAGTAACTCCATGCTTGATCCTAAGCATGATGATAAGTTCACATCCCAAGAAGAAGATCTAATCGTTAAGCTTCATGCAGCCATAGGTAGTAGGTGGTCTATCATAGCTCAACAACTTCCTGGGAGAACAGACAATGATGTTAAGAACAATTGGAACACAAAGCTGAAAAAGAAGCTTTCTCAAATGGGGATAGACCCTGTTACTCACAAGCCTTTCTCTAAACTCATTGCTGATTATGGAAATATAGGTGGTGCTAATTGTCATATTAATCAAGACTTTAGGAATCAAAGATTGATCAGGAACACAAATGACCTATCAAAGCAATTGCCACCCAAAATGGAAACAGTTATGAATCTTTCACAGTTCCAAACCATCCCAATGACAAAAATAGAAAATGAAACCAGTAATAATAATAATCCAACATCAATGTTTATGGAAGCATTTTTGTCATCATCATCATCATCACCATTACCTTCAACACAAGAAACAAACTTTTCTGCACCATTTAGTTGGAATGACTTTCTTCTACAAGATGCTTTTTCACAAGATGCACCTACTAATAACCTGCAAGAACAACAAATTTTAGGTGGATTGTTATCAAAGAAAGAGGTCATGTCACACCAAGTCTCATCATCCTCAGACATTTCATTCGTAGAGACCATACTCGATCAAGAAAATGAGATGTTTCTAAGCTTTCCCGAACTTTTGGAGGAACCATCCAATTACTAA
Protein sequence

>MS.gene03693.t1

MVRSSSCEKNSVIKRGVWIAEDAKAPSFASEHGSVNLTSVPKKTGVKRYGKSCRLRWSNSMLDPKHDDKFTSQEEDLIVKLHAAIGSRWSIIAQQLPGRTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGANCHINQDFRNQRLIRNTNDLSKQLPPKMETVMNLSQFQTIPMTKIENETSNNNNPTSMFMEAFLSSSSSSPLPSTQETNFSAPFSWNDFLLQDAFSQDAPTNNLQEQQILGGLLSKKEVMSHQVSSSSDISFVETILDQENEMFLSFPELLEEPSNY