AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03705

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03705.t1 MTR_4g057270 96.626 326 9 2 1 325 11 335 0.0 642
MS.gene03705.t1 MTR_2g084280 63.750 320 92 9 13 323 9 313 2.90e-129 371
MS.gene03705.t1 MTR_8g064700 31.443 194 106 7 130 309 235 415 1.72e-19 89.0
MS.gene03705.t1 MTR_3g030700 28.696 230 139 6 98 312 153 372 2.51e-19 87.8
MS.gene03705.t1 MTR_1g112680 33.333 144 69 4 134 250 312 455 6.97e-17 81.6
MS.gene03705.t1 MTR_3g104100 33.939 165 92 7 138 292 194 351 1.03e-16 80.5
MS.gene03705.t1 MTR_8g067280 29.885 174 108 5 132 292 452 624 1.38e-16 80.9
MS.gene03705.t1 MTR_2g038040 32.099 162 97 4 138 287 51 211 1.55e-16 78.2
MS.gene03705.t1 MTR_3g498695 35.338 133 83 1 124 256 283 412 3.40e-16 79.3
MS.gene03705.t1 MTR_3g498695 35.338 133 83 1 124 256 283 412 3.57e-16 79.3
MS.gene03705.t1 MTR_5g030430 28.061 196 122 6 105 282 451 645 1.14e-15 78.2
MS.gene03705.t1 MTR_2g081040 31.515 165 96 7 138 292 176 333 3.41e-15 75.9
MS.gene03705.t1 MTR_4g091910 32.278 158 90 5 138 290 46 191 6.79e-15 72.8
MS.gene03705.t1 MTR_8g027495 33.721 172 95 8 143 312 462 616 1.28e-14 75.1
MS.gene03705.t1 MTR_7g083900 51.471 68 30 1 138 205 285 349 6.89e-14 72.4
MS.gene03705.t1 MTR_7g083900 51.471 68 30 1 138 205 285 349 7.16e-14 72.4
MS.gene03705.t1 MTR_7g117670 30.769 156 96 5 143 298 406 549 2.57e-13 70.9
MS.gene03705.t1 MTR_8g024790 27.094 203 109 7 103 282 247 433 1.04e-12 68.9
MS.gene03705.t1 MTR_7g096350 28.814 177 95 6 132 305 345 493 6.68e-12 66.6
MS.gene03705.t1 MTR_8g024770 35.417 96 54 1 105 192 237 332 1.19e-11 65.5
MS.gene03705.t1 MTR_4g097950 27.820 133 90 2 141 267 72 204 3.73e-11 62.8
MS.gene03705.t1 MTR_5g030770 32.022 178 89 6 45 195 40 212 7.38e-11 62.8
MS.gene03705.t1 MTR_5g014640 29.747 158 90 5 141 294 156 296 7.46e-11 62.8
MS.gene03705.t1 MTR_5g030770 32.022 178 89 6 45 195 40 212 8.92e-11 62.4
MS.gene03705.t1 MTR_2g010450 26.761 142 100 3 128 267 166 305 9.43e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03705.t1 AT2G28160 52.599 327 129 11 7 323 7 317 4.64e-96 287
MS.gene03705.t1 AT2G28160 51.713 321 129 11 7 317 7 311 6.38e-92 276
MS.gene03705.t1 AT5G57150 39.490 157 85 4 138 286 53 207 1.85e-23 96.7
MS.gene03705.t1 AT5G57150 39.490 157 85 4 138 286 54 208 2.08e-23 96.7
MS.gene03705.t1 AT5G57150 39.490 157 85 4 138 286 54 208 2.08e-23 96.7
MS.gene03705.t1 AT5G57150 39.490 157 85 4 138 286 53 207 3.15e-23 96.7
MS.gene03705.t1 AT2G16910 35.838 173 85 4 137 284 312 483 7.04e-23 99.4
MS.gene03705.t1 AT5G57150 39.490 157 85 4 138 286 54 208 7.89e-23 95.9
MS.gene03705.t1 AT4G29930 36.364 143 82 3 138 279 53 187 1.40e-21 91.7
MS.gene03705.t1 AT4G29930 34.839 155 91 3 138 292 53 197 3.98e-21 90.9
MS.gene03705.t1 AT4G29930 35.915 142 81 3 138 279 53 184 1.29e-20 89.0
MS.gene03705.t1 AT4G29930 34.066 182 85 5 138 292 53 226 6.71e-20 87.8
MS.gene03705.t1 AT4G29930 34.066 182 85 5 138 292 53 226 6.71e-20 87.8
MS.gene03705.t1 AT4G29930 34.911 169 75 5 138 279 53 213 2.43e-19 86.3
MS.gene03705.t1 AT4G29930 42.202 109 45 3 138 235 53 154 1.36e-17 79.7
MS.gene03705.t1 AT5G46760 26.178 191 125 6 104 282 374 560 2.91e-15 77.0
MS.gene03705.t1 AT2G46510 38.462 104 59 2 132 232 385 486 3.44e-15 76.6
MS.gene03705.t1 AT1G01260 32.749 171 83 5 126 288 412 558 5.00e-15 76.3
MS.gene03705.t1 AT1G01260 32.749 171 83 5 126 288 412 558 5.00e-15 76.3
MS.gene03705.t1 AT1G01260 32.749 171 83 5 126 288 412 558 5.00e-15 76.3
MS.gene03705.t1 AT1G10610 34.167 120 76 2 133 249 161 280 9.03e-15 74.7
MS.gene03705.t1 AT1G10610 34.167 120 76 2 133 249 228 347 1.27e-14 74.7
MS.gene03705.t1 AT1G10610 34.167 120 76 2 133 249 258 377 1.59e-14 74.3
MS.gene03705.t1 AT4G17880 29.286 140 97 2 143 282 420 557 4.98e-14 73.2
MS.gene03705.t1 AT1G12860 40.964 83 46 1 138 220 266 345 1.10e-13 71.6
MS.gene03705.t1 AT1G12860 40.964 83 46 1 138 220 266 345 1.16e-13 71.6
MS.gene03705.t1 AT3G26744 50.000 68 31 1 138 205 306 370 1.38e-13 71.6
MS.gene03705.t1 AT3G26744 50.000 68 31 1 138 205 306 370 1.38e-13 71.6
MS.gene03705.t1 AT3G26744 50.000 68 31 1 138 205 306 370 1.38e-13 71.6
MS.gene03705.t1 AT3G26744 50.000 68 31 1 138 205 306 370 1.56e-13 71.6
MS.gene03705.t1 AT4G21330 26.178 191 133 3 106 294 4 188 2.52e-13 68.6
MS.gene03705.t1 AT1G32640 29.240 171 83 6 132 282 442 594 3.31e-13 70.9
MS.gene03705.t1 AT5G10570 35.135 148 72 5 127 267 134 264 1.70e-11 64.7
MS.gene03705.t1 AT5G46830 28.025 157 95 4 143 293 347 491 2.64e-11 64.7

Find 56 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGTTCAGAATTCAAATT+TGG 0.148271 4.3:+43831342 MS.gene03705:CDS
AAATTTGGCAGGTTGATTTC+TGG 0.184628 4.3:-43831708 None:intergenic
AACCTCAGCCTTAAGCTTCT+TGG 0.225200 4.3:-43830986 None:intergenic
CAAAACTTTGATTCATTATA+AGG 0.232350 4.3:-43830218 None:intergenic
ATCACCCATAGCTTTAAATT+TGG 0.237169 4.3:-43831723 None:intergenic
AATTGATCCTTGATGAGTTT+TGG 0.238548 4.3:-43831037 None:intergenic
AAGCTTAAGGCTGAGGTTGC+AGG 0.310327 4.3:+43830991 MS.gene03705:CDS
TTGATGAATTGATCAAAGTT+TGG 0.317687 4.3:-43830141 None:intergenic
GTTAAGATAGTATGCAATAA+AGG 0.359876 4.3:+43831268 MS.gene03705:CDS
TTAATGTTTGCTAGTGTCTC+TGG 0.366559 4.3:-43830084 None:intergenic
AAGTGTACCTTAGTTATATT+CGG 0.367404 4.3:-43830558 None:intergenic
TTATCTATGTTGTGATCAAA+TGG 0.384556 4.3:-43830273 None:intergenic
GCTTTACGCATTGCGTTCAT+TGG 0.387836 4.3:+43830533 MS.gene03705:CDS
ACCTGCCAAATTTAAAGCTA+TGG 0.396521 4.3:+43831718 MS.gene03705:CDS
CGTAAAGCTTATCCTTCATT+CGG 0.412112 4.3:-43830518 None:intergenic
ATGGATAAGGCTTCAATCAT+TGG 0.415818 4.3:+43830925 MS.gene03705:CDS
CCCATAGCTTTAAATTTGGC+AGG 0.425488 4.3:-43831719 None:intergenic
AATATATGTATAGATGGATA+AGG 0.443648 4.3:+43830912 MS.gene03705:intron
CAATTCATCAATTTGATTCG+TGG 0.448543 4.3:+43830153 MS.gene03705:CDS
AATTCATCAATTTGATTCGT+GGG 0.449395 4.3:+43830154 MS.gene03705:CDS
TTTGATCCTACTTCTTCACT+TGG 0.449750 4.3:+43830309 MS.gene03705:CDS
AAGGTATGAATTCAAAGCCT+TGG 0.451801 4.3:-43831761 None:intergenic
GGACTTGAAGCATCATTAGC+AGG 0.454546 4.3:+43831012 MS.gene03705:CDS
TAGTATGCAATAAAGGAGAA+AGG 0.460470 4.3:+43831275 MS.gene03705:CDS
AATATGCAAGAAAATTGTCC+AGG 0.466755 4.3:+43831101 MS.gene03705:CDS
CTTTGGTTTCTGAGAGGAGG+AGG 0.467532 4.3:+43830490 MS.gene03705:CDS
TGAAAATAGGTGAAAGACTC+TGG 0.467988 4.3:+43831684 MS.gene03705:intron
AAATGATAGATCCAAGACTT+TGG 0.473297 4.3:+43830473 MS.gene03705:CDS
ATTGGTTCCGAATATAACTA+AGG 0.477975 4.3:+43830551 MS.gene03705:CDS
TATCTATGTTGTGATCAAAT+GGG 0.486497 4.3:-43830272 None:intergenic
TGTTGTTGTTGTTGCAGGAG+TGG 0.487793 4.3:-43830400 None:intergenic
CCTCTCAGAAACCAAAGTCT+TGG 0.490550 4.3:-43830484 None:intergenic
TTGTGATCAAATGGGTTTGA+AGG 0.490633 4.3:-43830264 None:intergenic
ATCACAAGCCAAGAAGCTTA+AGG 0.495865 4.3:+43830978 MS.gene03705:CDS
CATCAATTTGATTCGTGGGG+AGG 0.498663 4.3:+43830158 MS.gene03705:CDS
AGTATGCAATAAAGGAGAAA+GGG 0.511962 4.3:+43831276 MS.gene03705:CDS
ATGTGTCAAGCGTGAAAAGA+AGG 0.518768 4.3:-43831780 None:intergenic
ATGTTTCAAGTGGATGAAAG+AGG 0.519776 4.3:+43831238 MS.gene03705:CDS
CCTGCCAAATTTAAAGCTAT+GGG 0.525800 4.3:+43831719 MS.gene03705:CDS
AAAGAACCAAGTGAAGAAGT+AGG 0.527298 4.3:-43830315 None:intergenic
AATTTGGCAACTGTTTCTGA+TGG 0.530693 4.3:+43831358 MS.gene03705:CDS
GAGGAGGCGAAGCCGAATGA+AGG 0.530731 4.3:+43830506 MS.gene03705:CDS
TGTTTCAAGTGGATGAAAGA+GGG 0.533128 4.3:+43831239 MS.gene03705:CDS
ATCACCACTTGTAGTTGTTG+TGG 0.544215 4.3:-43830433 None:intergenic
AGCCAAGAAGCTTAAGGCTG+AGG 0.549244 4.3:+43830984 MS.gene03705:CDS
AGACTTTGGTTTCTGAGAGG+AGG 0.567716 4.3:+43830487 MS.gene03705:CDS
GTAGATTGATATGTTTCAAG+TGG 0.578490 4.3:+43831228 MS.gene03705:intron
ATTCAATTTACTAACAACAA+TGG 0.579590 4.3:+43831075 MS.gene03705:CDS
GCAGGGTCCAAAACTCATCA+AGG 0.584365 4.3:+43831030 MS.gene03705:CDS
ATGGGTTTGAAGGAAATGAA+AGG 0.592796 4.3:-43830254 None:intergenic
CCAAGACTTTGGTTTCTGAG+AGG 0.603254 4.3:+43830484 MS.gene03705:CDS
GAATTAAGAGTAGAAAATGA+TGG 0.612562 4.3:+43830366 MS.gene03705:CDS
GACTTGAAGCATCATTAGCA+GGG 0.620551 4.3:+43831013 MS.gene03705:CDS
ATTACCACAACAACTACAAG+TGG 0.626061 4.3:+43830429 MS.gene03705:CDS
ATTCATCAATTTGATTCGTG+GGG 0.631333 4.3:+43830155 MS.gene03705:CDS
ATGCAATAAAGGAGAAAGGG+TGG 0.638631 4.3:+43831279 MS.gene03705:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAATATATGTATAGA+TGG + chr4.3:43830906-43830925 MS.gene03705:intron 10.0%
!! CAAATAATGAAATAGAATAA+TGG - chr4.3:43831632-43831651 None:intergenic 15.0%
!!! AAACAAAATTACATGTTTTA+AGG + chr4.3:43831511-43831530 MS.gene03705:intron 15.0%
!!! TTAGTAAATTGAATCTTTTT+GGG - chr4.3:43831069-43831088 None:intergenic 15.0%
!!! TTTTTATTACCATATCATTT+AGG - chr4.3:43831599-43831618 None:intergenic 15.0%
!! AATATATGTATAGATGGATA+AGG + chr4.3:43830912-43830931 MS.gene03705:intron 20.0%
!! AATTATACATACTTAAGTCA+AGG - chr4.3:43830880-43830899 None:intergenic 20.0%
!! ATGATTGTATGAAATTTACA+AGG - chr4.3:43830822-43830841 None:intergenic 20.0%
!! ATGTAATTTCATAATTCGTA+GGG + chr4.3:43831543-43831562 MS.gene03705:intron 20.0%
!! ATGTGTATTATGTTGAAAAT+AGG + chr4.3:43831671-43831690 MS.gene03705:intron 20.0%
!! ATTCAATTTACTAACAACAA+TGG + chr4.3:43831075-43831094 MS.gene03705:CDS 20.0%
!! CAAAACTTTGATTCATTATA+AGG - chr4.3:43830221-43830240 None:intergenic 20.0%
!!! CTCCAAAATTTTTTATATTG+CGG + chr4.3:43830639-43830658 MS.gene03705:intron 20.0%
!!! GTTAGTAAATTGAATCTTTT+TGG - chr4.3:43831070-43831089 None:intergenic 20.0%
!!! TAGTAAATTGAATCTTTTTG+GGG - chr4.3:43831068-43831087 None:intergenic 20.0%
! AAGTGTACCTTAGTTATATT+CGG - chr4.3:43830561-43830580 None:intergenic 25.0%
! AATAGAAATTAACTACAGAG+AGG - chr4.3:43831422-43831441 None:intergenic 25.0%
! AGATATTTATCAAACAAACC+TGG - chr4.3:43831122-43831141 None:intergenic 25.0%
! ATAGAAATTAACTACAGAGA+GGG - chr4.3:43831421-43831440 None:intergenic 25.0%
! CAATGTTCAGAATTCAAATT+TGG + chr4.3:43831342-43831361 MS.gene03705:CDS 25.0%
! CATGTAATTTCATAATTCGT+AGG + chr4.3:43831542-43831561 MS.gene03705:intron 25.0%
! CTAAAAACACCTAAATGATA+TGG + chr4.3:43831587-43831606 MS.gene03705:intron 25.0%
! CTTATAATCACTATCCAAAA+TGG + chr4.3:43830770-43830789 MS.gene03705:intron 25.0%
! GAATTAAGAGTAGAAAATGA+TGG + chr4.3:43830366-43830385 MS.gene03705:CDS 25.0%
! GTTAAGATAGTATGCAATAA+AGG + chr4.3:43831268-43831287 MS.gene03705:CDS 25.0%
! TATCTATGTTGTGATCAAAT+GGG - chr4.3:43830275-43830294 None:intergenic 25.0%
! TTATCTATGTTGTGATCAAA+TGG - chr4.3:43830276-43830295 None:intergenic 25.0%
! TTGATGAATTGATCAAAGTT+TGG - chr4.3:43830144-43830163 None:intergenic 25.0%
!! AATTCATCAATTTGATTCGT+GGG + chr4.3:43830154-43830173 MS.gene03705:CDS 25.0%
!! CGCAATATAAAAAATTTTGG+AGG - chr4.3:43830641-43830660 None:intergenic 25.0%
!!! ATGGTTTTAAATTGTTGTTG+CGG + chr4.3:43830582-43830601 MS.gene03705:intron 25.0%
!!! GGTATTTTGACACAATATAA+AGG - chr4.3:43830620-43830639 None:intergenic 25.0%
AAATGATAGATCCAAGACTT+TGG + chr4.3:43830473-43830492 MS.gene03705:CDS 30.0%
AAGCAATTTCGTCTCATAAA+CGG - chr4.3:43830746-43830765 None:intergenic 30.0%
AATATGCAAGAAAATTGTCC+AGG + chr4.3:43831101-43831120 MS.gene03705:CDS 30.0%
AGTATGCAATAAAGGAGAAA+GGG + chr4.3:43831276-43831295 MS.gene03705:CDS 30.0%
GTAGATTGATATGTTTCAAG+TGG + chr4.3:43831228-43831247 MS.gene03705:intron 30.0%
TAGTATGCAATAAAGGAGAA+AGG + chr4.3:43831275-43831294 MS.gene03705:CDS 30.0%
TATAACTAAGGTACACTTCA+TGG + chr4.3:43830563-43830582 MS.gene03705:intron 30.0%
! AATTGATCCTTGATGAGTTT+TGG - chr4.3:43831040-43831059 None:intergenic 30.0%
! ACAATGCATCTTAACCATTT+TGG - chr4.3:43830787-43830806 None:intergenic 30.0%
! ATTAGTGCTTTTCTAAACCA+AGG + chr4.3:43831744-43831763 MS.gene03705:CDS 30.0%
! ATTCATCAATTTGATTCGTG+GGG + chr4.3:43830155-43830174 MS.gene03705:CDS 30.0%
! ATTGGTTCCGAATATAACTA+AGG + chr4.3:43830551-43830570 MS.gene03705:CDS 30.0%
! CAATTCATCAATTTGATTCG+TGG + chr4.3:43830153-43830172 MS.gene03705:CDS 30.0%
! GGCCGCAATATAAAAAATTT+TGG - chr4.3:43830644-43830663 None:intergenic 30.0%
!! ATCACCCATAGCTTTAAATT+TGG - chr4.3:43831726-43831745 None:intergenic 30.0%
!! GATCTATCATTTTTCGACTT+TGG - chr4.3:43830465-43830484 None:intergenic 30.0%
AAAGAACCAAGTGAAGAAGT+AGG - chr4.3:43830318-43830337 None:intergenic 35.0%
AAGGTATGAATTCAAAGCCT+TGG - chr4.3:43831764-43831783 None:intergenic 35.0%
AATTCGTAGGGACTAAAAAG+TGG + chr4.3:43831555-43831574 MS.gene03705:intron 35.0%
ATGGATAAGGCTTCAATCAT+TGG + chr4.3:43830925-43830944 MS.gene03705:CDS 35.0%
ATGGGTTTGAAGGAAATGAA+AGG - chr4.3:43830257-43830276 None:intergenic 35.0%
ATTACCACAACAACTACAAG+TGG + chr4.3:43830429-43830448 MS.gene03705:CDS 35.0%
CGTAAAGCTTATCCTTCATT+CGG - chr4.3:43830521-43830540 None:intergenic 35.0%
TGAAAATAGGTGAAAGACTC+TGG + chr4.3:43831684-43831703 MS.gene03705:intron 35.0%
TTAAATAGCGATCATCAACG+TGG - chr4.3:43830665-43830684 None:intergenic 35.0%
TTTGATCCTACTTCTTCACT+TGG + chr4.3:43830309-43830328 MS.gene03705:CDS 35.0%
! ACCTGCCAAATTTAAAGCTA+TGG + chr4.3:43831718-43831737 MS.gene03705:CDS 35.0%
! ATGTTTCAAGTGGATGAAAG+AGG + chr4.3:43831238-43831257 MS.gene03705:CDS 35.0%
! CCTGCCAAATTTAAAGCTAT+GGG + chr4.3:43831719-43831738 MS.gene03705:CDS 35.0%
! GTTTTGTAGAGACGAAAAAG+TGG - chr4.3:43831495-43831514 None:intergenic 35.0%
! TGTTTCAAGTGGATGAAAGA+GGG + chr4.3:43831239-43831258 MS.gene03705:CDS 35.0%
! TTAATGTTTGCTAGTGTCTC+TGG - chr4.3:43830087-43830106 None:intergenic 35.0%
! TTGTGATCAAATGGGTTTGA+AGG - chr4.3:43830267-43830286 None:intergenic 35.0%
!! AAATTTGGCAGGTTGATTTC+TGG - chr4.3:43831711-43831730 None:intergenic 35.0%
!! AATTTGGCAACTGTTTCTGA+TGG + chr4.3:43831358-43831377 MS.gene03705:CDS 35.0%
!!! GGTTCTTTCTCTTGTTTTGA+TGG + chr4.3:43830330-43830349 MS.gene03705:CDS 35.0%
!!! TGTTTTGATGGAGAAGCTAA+GGG + chr4.3:43830342-43830361 MS.gene03705:CDS 35.0%
!!! TTGTTTTGATGGAGAAGCTA+AGG + chr4.3:43830341-43830360 MS.gene03705:CDS 35.0%
ATCACAAGCCAAGAAGCTTA+AGG + chr4.3:43830978-43830997 MS.gene03705:CDS 40.0%
ATCACCACTTGTAGTTGTTG+TGG - chr4.3:43830436-43830455 None:intergenic 40.0%
ATGCAATAAAGGAGAAAGGG+TGG + chr4.3:43831279-43831298 MS.gene03705:CDS 40.0%
! GACTTGAAGCATCATTAGCA+GGG + chr4.3:43831013-43831032 MS.gene03705:CDS 40.0%
! TTTTGATGGAGAAGCTAAGG+GGG + chr4.3:43830344-43830363 MS.gene03705:CDS 40.0%
!! CCCATAGCTTTAAATTTGGC+AGG - chr4.3:43831722-43831741 None:intergenic 40.0%
!! CTTGTTGTTGTTGTTGTTGC+AGG - chr4.3:43830408-43830427 None:intergenic 40.0%
!! GTTTTGATGGAGAAGCTAAG+GGG + chr4.3:43830343-43830362 MS.gene03705:CDS 40.0%
AACCTCAGCCTTAAGCTTCT+TGG - chr4.3:43830989-43831008 None:intergenic 45.0%
CCTCTCAGAAACCAAAGTCT+TGG - chr4.3:43830487-43830506 None:intergenic 45.0%
GCTTTACGCATTGCGTTCAT+TGG + chr4.3:43830533-43830552 MS.gene03705:CDS 45.0%
! AGACTTTGGTTTCTGAGAGG+AGG + chr4.3:43830487-43830506 MS.gene03705:CDS 45.0%
! CATCAATTTGATTCGTGGGG+AGG + chr4.3:43830158-43830177 MS.gene03705:CDS 45.0%
! CCAAGACTTTGGTTTCTGAG+AGG + chr4.3:43830484-43830503 MS.gene03705:CDS 45.0%
! GGACTTGAAGCATCATTAGC+AGG + chr4.3:43831012-43831031 MS.gene03705:CDS 45.0%
! TGTTGTTGTTGTTGCAGGAG+TGG - chr4.3:43830403-43830422 None:intergenic 45.0%
AAGCTTAAGGCTGAGGTTGC+AGG + chr4.3:43830991-43831010 MS.gene03705:CDS 50.0%
AGCCAAGAAGCTTAAGGCTG+AGG + chr4.3:43830984-43831003 MS.gene03705:CDS 50.0%
GCAGGGTCCAAAACTCATCA+AGG + chr4.3:43831030-43831049 MS.gene03705:CDS 50.0%
! CTTTGGTTTCTGAGAGGAGG+AGG + chr4.3:43830490-43830509 MS.gene03705:CDS 50.0%
GAGGAGGCGAAGCCGAATGA+AGG + chr4.3:43830506-43830525 MS.gene03705:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 43830072 43831797 43830072 ID=MS.gene03705
chr4.3 mRNA 43830072 43831797 43830072 ID=MS.gene03705.t1;Parent=MS.gene03705
chr4.3 exon 43830072 43830572 43830072 ID=MS.gene03705.t1.exon1;Parent=MS.gene03705.t1
chr4.3 CDS 43830072 43830572 43830072 ID=cds.MS.gene03705.t1;Parent=MS.gene03705.t1
chr4.3 exon 43830925 43831122 43830925 ID=MS.gene03705.t1.exon2;Parent=MS.gene03705.t1
chr4.3 CDS 43830925 43831122 43830925 ID=cds.MS.gene03705.t1;Parent=MS.gene03705.t1
chr4.3 exon 43831232 43831405 43831232 ID=MS.gene03705.t1.exon3;Parent=MS.gene03705.t1
chr4.3 CDS 43831232 43831405 43831232 ID=cds.MS.gene03705.t1;Parent=MS.gene03705.t1
chr4.3 exon 43831693 43831797 43831693 ID=MS.gene03705.t1.exon4;Parent=MS.gene03705.t1
chr4.3 CDS 43831693 43831797 43831693 ID=cds.MS.gene03705.t1;Parent=MS.gene03705.t1
Gene Sequence

>MS.gene03705

ATGGATTTTTATCCAGAGACACTAGCAAACATTAACAATGACTATGAGTTACACGATTTCATTGATGATCCAAACTTTGATCAATTCATCAATTTGATTCGTGGGGAGGAGAATGAAGATACTACTATTTGTAACTTCAATTCTGACCTTATAATGAATCAAAGTTTTGTTGATAACTCACTCCTTTCATTTCCTTCAAACCCATTTGATCACAACATAGATAATACTGTCACTGCTTTTGATCCTACTTCTTCACTTGGTTCTTTCTCTTGTTTTGATGGAGAAGCTAAGGGGGAATTAAGAGTAGAAAATGATGGTGATAATTACTCCACTCCTGCAACAACAACAACAACAAGCATTACCACAACAACTACAAGTGGTGATACTAAGCCAAAGTCGAAAAATGATAGATCCAAGACTTTGGTTTCTGAGAGGAGGAGGCGAAGCCGAATGAAGGATAAGCTTTACGCATTGCGTTCATTGGTTCCGAATATAACTAAGGTACACTTCATGGTTTTAAATTGTTGTTGCGGTTACACTGCAAACCTTTATATTGTGTCAAAATACCTCCAAAATTTTTTATATTGCGGCCACGTTGATGATCGCTATTTAAAACTATGATAAATTTAGTATCATAAAATTTTTGTCGTGTCTAACTCAATCTTAAAAATCCGTTTATGAGACGAAATTGCTTCACACTTATAATCACTATCCAAAATGGTTAAGATGCATTGTTGATTAGACTAGCCTTGTAAATTTCATACAATCATAAGTGTCTTATTATAATCAAAATGTGATTAATTAACCTTGACTTAAGTATGTATAATTGATATTATATTTAATATATGTATAGATGGATAAGGCTTCAATCATTGGAGATGCTGTTTCATATATGCATGAACTTCAATCACAAGCCAAGAAGCTTAAGGCTGAGGTTGCAGGACTTGAAGCATCATTAGCAGGGTCCAAAACTCATCAAGGATCAATTGAAAACCCCAAAAAGATTCAATTTACTAACAACAATGGTTCAATATGCAAGAAAATTGTCCAGGTTTGTTTGATAAATATCTAATTAGCTCAATAAAAAGTTTTATTTAGTTAATTAATCTCTATTGTAAGATATTGTAATTTGTAACATCTTTGAATGTTGCTTTGTGTAGATTGATATGTTTCAAGTGGATGAAAGAGGGTTTTATGTTAAGATAGTATGCAATAAAGGAGAAAGGGTGGCTTCTTCATTATACAAGTCTCTTGAATCTTTGAGAGATTTCAATGTTCAGAATTCAAATTTGGCAACTGTTTCTGATGGTTTTCTATTTACATTTTCATTGAATGTAAGCTATATTCCCTCTCTGTAGTTAATTTCTATTTTATTTCTAGTCATTATAATTATCTCGAATTTTGTTCGTAGACTCTGTATCCACTTTTTCGTCTCTACAAAACAAAATTACATGTTTTAAGGACTAAAAACATGTAATTTCATAATTCGTAGGGACTAAAAAGTGGATCATGAGACTAAAAACACCTAAATGATATGGTAATAAAAATATATTTAATCCATTATTCTATTTCATTATTTGTTTACTGAAATATTAATTCATGTGTATTATGTTGAAAATAGGTGAAAGACTCTGGACCAGAAATCAACCTGCCAAATTTAAAGCTATGGGTGATTAGTGCTTTTCTAAACCAAGGCTTTGAATTCATACCTTCTTTTCACGCTTGA
Protein sequence

>MS.gene03705.t1

MDFYPETLANINNDYELHDFIDDPNFDQFINLIRGEENEDTTICNFNSDLIMNQSFVDNSLLSFPSNPFDHNIDNTVTAFDPTSSLGSFSCFDGEAKGELRVENDGDNYSTPATTTTTSITTTTTSGDTKPKSKNDRSKTLVSERRRRSRMKDKLYALRSLVPNITKMDKASIIGDAVSYMHELQSQAKKLKAEVAGLEASLAGSKTHQGSIENPKKIQFTNNNGSICKKIVQIDMFQVDERGFYVKIVCNKGERVASSLYKSLESLRDFNVQNSNLATVSDGFLFTFSLNVKDSGPEINLPNLKLWVISAFLNQGFEFIPSFHA