Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037204.t1 | KEH22261.1 | 88 | 233 | 20 | 1 | 1 | 225 | 1 | 233 | 7.40E-117 | 429.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037204.t1 | Q9S7L2 | 40.0 | 115 | 57 | 3 | 62 | 164 | 211 | 325 | 4.4e-17 | 89.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037204.t1 | A0A072TYJ9 | 88.0 | 233 | 20 | 1 | 1 | 225 | 1 | 233 | 5.4e-117 | 429.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene037204.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037204.t1 | MTR_7g035300 | 87.983 | 233 | 20 | 1 | 1 | 225 | 1 | 233 | 1.66e-155 | 430 |
| MS.gene037204.t1 | MTR_7g037260 | 43.096 | 239 | 80 | 6 | 42 | 224 | 119 | 357 | 1.10e-52 | 173 |
| MS.gene037204.t1 | MTR_7g037130 | 43.644 | 236 | 77 | 6 | 42 | 221 | 119 | 354 | 4.53e-49 | 164 |
| MS.gene037204.t1 | MTR_7g451170 | 40.698 | 258 | 89 | 7 | 31 | 224 | 154 | 411 | 9.83e-48 | 162 |
| MS.gene037204.t1 | MTR_4g088015 | 35.808 | 229 | 83 | 6 | 57 | 221 | 210 | 438 | 1.25e-35 | 130 |
| MS.gene037204.t1 | MTR_1g057980 | 33.068 | 251 | 95 | 6 | 32 | 209 | 44 | 294 | 3.16e-31 | 116 |
| MS.gene037204.t1 | MTR_7g035350 | 31.200 | 250 | 95 | 6 | 36 | 208 | 193 | 442 | 5.70e-26 | 104 |
| MS.gene037204.t1 | MTR_7g450950 | 39.286 | 196 | 77 | 5 | 37 | 190 | 125 | 320 | 3.93e-25 | 100 |
| MS.gene037204.t1 | MTR_3g077650 | 45.283 | 106 | 46 | 3 | 70 | 163 | 183 | 288 | 1.31e-20 | 89.7 |
| MS.gene037204.t1 | MTR_5g049190 | 42.202 | 109 | 51 | 3 | 64 | 160 | 15 | 123 | 8.51e-20 | 85.1 |
| MS.gene037204.t1 | MTR_4g105660 | 38.261 | 115 | 59 | 3 | 62 | 164 | 174 | 288 | 9.65e-19 | 84.3 |
| MS.gene037204.t1 | MTR_3g463400 | 35.652 | 115 | 62 | 3 | 70 | 172 | 135 | 249 | 1.10e-18 | 84.3 |
| MS.gene037204.t1 | MTR_5g070020 | 31.707 | 164 | 90 | 5 | 28 | 174 | 77 | 235 | 1.51e-18 | 83.2 |
| MS.gene037204.t1 | MTR_6g027340 | 38.614 | 101 | 52 | 3 | 91 | 185 | 50 | 146 | 3.60e-14 | 68.9 |
| MS.gene037204.t1 | MTR_7g061330 | 41.935 | 93 | 42 | 3 | 71 | 151 | 116 | 208 | 7.71e-14 | 70.5 |
| MS.gene037204.t1 | MTR_7g461410 | 41.935 | 93 | 42 | 3 | 71 | 151 | 116 | 208 | 7.71e-14 | 70.5 |
| MS.gene037204.t1 | MTR_7g061330 | 41.935 | 93 | 42 | 3 | 71 | 151 | 80 | 172 | 8.66e-14 | 70.1 |
| MS.gene037204.t1 | MTR_5g010650 | 39.785 | 93 | 44 | 3 | 70 | 150 | 112 | 204 | 1.06e-13 | 69.7 |
| MS.gene037204.t1 | MTR_6g027360 | 38.384 | 99 | 51 | 3 | 93 | 185 | 114 | 208 | 1.37e-13 | 68.9 |
| MS.gene037204.t1 | MTR_4g019370 | 37.391 | 115 | 52 | 5 | 71 | 165 | 41 | 155 | 1.58e-13 | 68.9 |
| MS.gene037204.t1 | MTR_1g026870 | 32.174 | 115 | 65 | 4 | 71 | 172 | 88 | 202 | 3.20e-13 | 68.6 |
| MS.gene037204.t1 | MTR_3g110028 | 33.913 | 115 | 63 | 4 | 71 | 172 | 88 | 202 | 7.92e-13 | 67.4 |
| MS.gene037204.t1 | MTR_4g128190 | 36.957 | 92 | 55 | 3 | 65 | 154 | 10 | 100 | 1.22e-11 | 62.8 |
| MS.gene037204.t1 | MTR_1g008970 | 39.796 | 98 | 55 | 4 | 93 | 187 | 127 | 223 | 1.73e-11 | 62.4 |
| MS.gene037204.t1 | MTR_5g041570 | 35.455 | 110 | 54 | 4 | 71 | 163 | 137 | 246 | 3.16e-11 | 62.4 |
| MS.gene037204.t1 | MTR_4g082040 | 34.483 | 116 | 63 | 4 | 50 | 152 | 86 | 201 | 3.17e-11 | 62.4 |
| MS.gene037204.t1 | MTR_3g052450 | 33.333 | 102 | 53 | 3 | 64 | 151 | 38 | 138 | 5.70e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037204.t1 | AT4G18770 | 40.000 | 115 | 57 | 3 | 62 | 164 | 211 | 325 | 1.27e-20 | 89.7 |
| MS.gene037204.t1 | AT3G27785 | 40.541 | 111 | 54 | 2 | 62 | 160 | 183 | 293 | 1.35e-19 | 87.0 |
| MS.gene037204.t1 | AT5G40360 | 40.678 | 118 | 56 | 3 | 60 | 164 | 150 | 266 | 1.56e-18 | 83.2 |
| MS.gene037204.t1 | AT2G25230 | 40.157 | 127 | 63 | 4 | 62 | 175 | 20 | 146 | 1.14e-17 | 79.0 |
| MS.gene037204.t1 | AT5G58850 | 38.532 | 109 | 55 | 3 | 65 | 161 | 102 | 210 | 1.32e-17 | 81.3 |
| MS.gene037204.t1 | AT5G11050 | 39.640 | 111 | 55 | 3 | 63 | 161 | 100 | 210 | 1.67e-17 | 80.9 |
| MS.gene037204.t1 | AT5G40430 | 35.758 | 165 | 89 | 6 | 62 | 209 | 48 | 212 | 3.19e-17 | 78.2 |
| MS.gene037204.t1 | AT5G11510 | 37.778 | 90 | 44 | 2 | 71 | 148 | 84 | 173 | 5.44e-13 | 68.2 |
| MS.gene037204.t1 | AT5G11510 | 37.778 | 90 | 44 | 2 | 71 | 148 | 84 | 173 | 5.44e-13 | 68.2 |
| MS.gene037204.t1 | AT5G11510 | 37.778 | 90 | 44 | 2 | 71 | 148 | 84 | 173 | 5.44e-13 | 68.2 |
| MS.gene037204.t1 | AT5G11510 | 37.778 | 90 | 44 | 2 | 71 | 148 | 84 | 173 | 5.87e-13 | 67.8 |
| MS.gene037204.t1 | AT5G11510 | 37.778 | 90 | 44 | 2 | 71 | 148 | 84 | 173 | 6.22e-13 | 67.8 |
| MS.gene037204.t1 | AT3G53200 | 41.667 | 72 | 40 | 2 | 78 | 148 | 1 | 71 | 1.05e-12 | 65.1 |
| MS.gene037204.t1 | AT5G02320 | 36.559 | 93 | 47 | 3 | 71 | 151 | 130 | 222 | 1.37e-12 | 66.6 |
| MS.gene037204.t1 | AT5G02320 | 36.559 | 93 | 47 | 3 | 71 | 151 | 130 | 222 | 1.37e-12 | 66.6 |
| MS.gene037204.t1 | AT5G02320 | 36.559 | 93 | 47 | 3 | 71 | 151 | 70 | 162 | 1.57e-12 | 66.6 |
| MS.gene037204.t1 | AT1G69560 | 25.806 | 186 | 113 | 6 | 4 | 169 | 61 | 241 | 1.88e-12 | 65.9 |
| MS.gene037204.t1 | AT1G69560 | 25.806 | 186 | 113 | 6 | 4 | 169 | 45 | 225 | 2.05e-12 | 65.9 |
| MS.gene037204.t1 | AT3G09370 | 38.710 | 93 | 45 | 3 | 71 | 151 | 133 | 225 | 2.98e-12 | 65.9 |
| MS.gene037204.t1 | AT3G09370 | 38.710 | 93 | 45 | 3 | 71 | 151 | 138 | 230 | 3.07e-12 | 65.5 |
| MS.gene037204.t1 | AT3G09370 | 38.710 | 93 | 45 | 3 | 71 | 151 | 146 | 238 | 3.49e-12 | 65.5 |
| MS.gene037204.t1 | AT3G28470 | 32.673 | 101 | 55 | 3 | 64 | 151 | 10 | 110 | 6.40e-12 | 64.3 |
| MS.gene037204.t1 | AT1G57560 | 29.545 | 132 | 82 | 4 | 93 | 218 | 51 | 177 | 8.15e-12 | 63.5 |
| MS.gene037204.t1 | AT2G47190 | 31.193 | 109 | 62 | 3 | 53 | 148 | 7 | 115 | 1.32e-11 | 62.8 |
| MS.gene037204.t1 | AT4G33450 | 43.243 | 74 | 37 | 2 | 93 | 165 | 55 | 124 | 1.33e-11 | 62.8 |
| MS.gene037204.t1 | AT3G53200 | 45.614 | 57 | 30 | 1 | 93 | 148 | 48 | 104 | 1.91e-11 | 62.0 |
| MS.gene037204.t1 | AT1G57560 | 40.580 | 69 | 40 | 1 | 93 | 160 | 51 | 119 | 2.69e-11 | 62.4 |
| MS.gene037204.t1 | AT4G32730 | 34.409 | 93 | 49 | 3 | 71 | 151 | 90 | 182 | 3.06e-11 | 62.8 |
| MS.gene037204.t1 | AT4G32730 | 34.409 | 93 | 49 | 3 | 71 | 151 | 90 | 182 | 3.49e-11 | 62.8 |
| MS.gene037204.t1 | AT4G32730 | 34.409 | 93 | 49 | 3 | 71 | 151 | 90 | 182 | 3.49e-11 | 62.8 |
| MS.gene037204.t1 | AT4G32730 | 34.409 | 93 | 49 | 3 | 71 | 151 | 90 | 182 | 3.49e-11 | 62.8 |
| MS.gene037204.t1 | AT4G32730 | 34.409 | 93 | 49 | 3 | 71 | 151 | 90 | 182 | 3.49e-11 | 62.8 |
Find 43 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTATGTGGAAACGTTTA+AGG | 0.181442 | 7.3:+62873105 | MS.gene037204:CDS |
| AACGATGATTATGAGTTATA+TGG | 0.223163 | 7.3:+62873030 | MS.gene037204:CDS |
| GGCATTCTCGACTTGCTTAA+TGG | 0.229142 | 7.3:-62872899 | None:intergenic |
| ACTACTCCAGAAGATGAATT+TGG | 0.261057 | 7.3:+62872985 | MS.gene037204:CDS |
| GATCAAGCCCACAACATATT+TGG | 0.264284 | 7.3:+62872805 | MS.gene037204:CDS |
| AAAAGAAACACCTTAATATC+TGG | 0.291683 | 7.3:-62872294 | None:intergenic |
| CCATTGATCAGCATTTATAT+TGG | 0.314785 | 7.3:-62872033 | None:intergenic |
| AAATGATTGTACTCAATATA+AGG | 0.322591 | 7.3:+62871860 | MS.gene037204:CDS |
| CCATCTTAAACCAGATATTA+AGG | 0.331529 | 7.3:+62872284 | MS.gene037204:CDS |
| GAATAGTATTCTGCTGCTTA+TGG | 0.333313 | 7.3:-62871980 | None:intergenic |
| GAAATTGATTTCCTGCTTCA+TGG | 0.333503 | 7.3:-62873076 | None:intergenic |
| ACCTTAAACGTTTCCACATA+AGG | 0.341962 | 7.3:-62873106 | None:intergenic |
| TATCCACCAAATTCATCTTC+TGG | 0.354153 | 7.3:-62872991 | None:intergenic |
| TAAGCAGCAGAATACTATTC+AGG | 0.381837 | 7.3:+62871983 | MS.gene037204:CDS |
| TCAATATAAGGAACATCATA+TGG | 0.403054 | 7.3:+62871872 | MS.gene037204:CDS |
| TAATCATCGTTGAATGTCAT+TGG | 0.431930 | 7.3:-62873018 | None:intergenic |
| TTCCTGCTTCATGGGAACCT+CGG | 0.444432 | 7.3:-62873067 | None:intergenic |
| TCCTGCTTCATGGGAACCTC+GGG | 0.444652 | 7.3:-62873066 | None:intergenic |
| ACAACATATTTGGAGACAAC+TGG | 0.446422 | 7.3:+62872815 | MS.gene037204:CDS |
| GTTGTCTCCAAATATGTTGT+GGG | 0.463375 | 7.3:-62872812 | None:intergenic |
| TGCTTATGGTAAATGAGAAC+GGG | 0.465009 | 7.3:-62871966 | None:intergenic |
| AATTTCATGAAGGCCTTATG+TGG | 0.471697 | 7.3:+62873093 | MS.gene037204:CDS |
| AAATTGATTTCCTGCTTCAT+GGG | 0.472609 | 7.3:-62873075 | None:intergenic |
| ATATTTGTATCCAATTTCAC+TGG | 0.483235 | 7.3:-62871925 | None:intergenic |
| CCTTAATATCTGGTTTAAGA+TGG | 0.484241 | 7.3:-62872284 | None:intergenic |
| AATGGACTACAAAAGAGAAT+AGG | 0.491834 | 7.3:+62872051 | MS.gene037204:CDS |
| TCCCGAGGTTCCCATGAAGC+AGG | 0.502564 | 7.3:+62873065 | MS.gene037204:CDS |
| AGTTGTCTCCAAATATGTTG+TGG | 0.504440 | 7.3:-62872813 | None:intergenic |
| GAAATTTCAAGAAGATTGCC+AGG | 0.513813 | 7.3:+62872841 | MS.gene037204:CDS |
| CCAATATAAATGCTGATCAA+TGG | 0.515462 | 7.3:+62872033 | MS.gene037204:CDS |
| TGAGAACGGGTTCTTGATCA+TGG | 0.521600 | 7.3:-62871953 | None:intergenic |
| CTGCTTATGGTAAATGAGAA+CGG | 0.536086 | 7.3:-62871967 | None:intergenic |
| TGGATCTCTTTCTAAATCGA+TGG | 0.536456 | 7.3:+62872232 | MS.gene037204:CDS |
| TAAAACAATGCATGGAGAGA+TGG | 0.560064 | 7.3:+62872259 | MS.gene037204:CDS |
| ATGGACCTTAAAACAATGCA+TGG | 0.570560 | 7.3:+62872251 | MS.gene037204:CDS |
| ACTCCAGAAGATGAATTTGG+TGG | 0.588319 | 7.3:+62872988 | MS.gene037204:CDS |
| TAAGGAACATCATATGGATG+AGG | 0.593905 | 7.3:+62871878 | MS.gene037204:CDS |
| GCAGGAAATCAATTTCATGA+AGG | 0.597528 | 7.3:+62873083 | MS.gene037204:CDS |
| GAATGAGCCATTGAGTGAGG+AGG | 0.611909 | 7.3:+62872768 | MS.gene037204:intron |
| ACATAACTATCGTTACGTCC+TGG | 0.612302 | 7.3:-62872859 | None:intergenic |
| TGGTTGCAAAACTAGAGTGA+TGG | 0.623138 | 7.3:-62871905 | None:intergenic |
| TCGATTTAGAAAGAGATCCA+CGG | 0.651610 | 7.3:-62872229 | None:intergenic |
| GTAGAATGAGCCATTGAGTG+AGG | 0.657428 | 7.3:+62872765 | MS.gene037204:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCATATATAGTTTTATTA+TGG | + | chr7.3:62872116-62872135 | MS.gene037204:intron | 10.0% |
| !! | GTCTATATATAATTAAATAG+AGG | - | chr7.3:62872719-62872738 | None:intergenic | 15.0% |
| !! | AAACCTTCAAAAATGTAATT+AGG | - | chr7.3:62872964-62872983 | None:intergenic | 20.0% |
| !! | AAATGATTGTACTCAATATA+AGG | + | chr7.3:62871860-62871879 | MS.gene037204:CDS | 20.0% |
| !! | ATAAAAATATTGCACATGAA+TGG | + | chr7.3:62872667-62872686 | MS.gene037204:intron | 20.0% |
| !! | ATACAAAACATGTTTAGATT+AGG | - | chr7.3:62872741-62872760 | None:intergenic | 20.0% |
| !! | TTACGCAATAAAAGATAAAA+AGG | - | chr7.3:62872352-62872371 | None:intergenic | 20.0% |
| !!! | TATGATTTTATAACAACAAG+TGG | + | chr7.3:62872481-62872500 | MS.gene037204:intron | 20.0% |
| !!! | TGCTAAAAAAAGTGTTAAAA+AGG | - | chr7.3:62872325-62872344 | None:intergenic | 20.0% |
| ! | AAAAAATACACACATCCATT+AGG | - | chr7.3:62872606-62872625 | None:intergenic | 25.0% |
| ! | AAAAGAAACACCTTAATATC+TGG | - | chr7.3:62872297-62872316 | None:intergenic | 25.0% |
| ! | AACGATGATTATGAGTTATA+TGG | + | chr7.3:62873030-62873049 | MS.gene037204:CDS | 25.0% |
| ! | ATATTTGTATCCAATTTCAC+TGG | - | chr7.3:62871928-62871947 | None:intergenic | 25.0% |
| ! | CATTTCATTGAAAAACCTAA+TGG | + | chr7.3:62872588-62872607 | MS.gene037204:intron | 25.0% |
| ! | CTTCAAAAATGTAATTAGGT+TGG | - | chr7.3:62872960-62872979 | None:intergenic | 25.0% |
| ! | TCAATATAAGGAACATCATA+TGG | + | chr7.3:62871872-62871891 | MS.gene037204:CDS | 25.0% |
| !! | CAACCTAATTACATTTTTGA+AGG | + | chr7.3:62872958-62872977 | MS.gene037204:CDS | 25.0% |
| !!! | TGTAAAAGCATTATATGTGT+AGG | - | chr7.3:62872376-62872395 | None:intergenic | 25.0% |
| ATGGAAACAAATTGGTGAAA+TGG | + | chr7.3:62872686-62872705 | MS.gene037204:intron | 30.0% | |
| CCAATATAAATGCTGATCAA+TGG | + | chr7.3:62872033-62872052 | MS.gene037204:CDS | 30.0% | |
| CCATCTTAAACCAGATATTA+AGG | + | chr7.3:62872284-62872303 | MS.gene037204:CDS | 30.0% | |
| CCATTGATCAGCATTTATAT+TGG | - | chr7.3:62872036-62872055 | None:intergenic | 30.0% | |
| TAATCATCGTTGAATGTCAT+TGG | - | chr7.3:62873021-62873040 | None:intergenic | 30.0% | |
| ! | AAATTGATTTCCTGCTTCAT+GGG | - | chr7.3:62873078-62873097 | None:intergenic | 30.0% |
| ! | CCTTAATATCTGGTTTAAGA+TGG | - | chr7.3:62872287-62872306 | None:intergenic | 30.0% |
| ! | TTGTTTCTTACATTTGAGAC+CGG | + | chr7.3:62872632-62872651 | MS.gene037204:intron | 30.0% |
| ! | TTTTTATTATGTACTCCCTC+CGG | - | chr7.3:62872654-62872673 | None:intergenic | 30.0% |
| !! | AATGGACTACAAAAGAGAAT+AGG | + | chr7.3:62872051-62872070 | MS.gene037204:CDS | 30.0% |
| !!! | AGTACAATCATTTTGAGACA+AGG | - | chr7.3:62871853-62871872 | None:intergenic | 30.0% |
| !!! | GTACAATCATTTTGAGACAA+GGG | - | chr7.3:62871852-62871871 | None:intergenic | 30.0% |
| ACAACATATTTGGAGACAAC+TGG | + | chr7.3:62872815-62872834 | MS.gene037204:CDS | 35.0% | |
| ACTACTCCAGAAGATGAATT+TGG | + | chr7.3:62872985-62873004 | MS.gene037204:CDS | 35.0% | |
| AGAATGCCAAGAAAAAATCC+AGG | + | chr7.3:62872914-62872933 | MS.gene037204:CDS | 35.0% | |
| AGTTGTCTCCAAATATGTTG+TGG | - | chr7.3:62872816-62872835 | None:intergenic | 35.0% | |
| ATGGACCTTAAAACAATGCA+TGG | + | chr7.3:62872251-62872270 | MS.gene037204:CDS | 35.0% | |
| CAAGAAAAAATCCAGGAACA+TGG | + | chr7.3:62872921-62872940 | MS.gene037204:CDS | 35.0% | |
| CTGCTTATGGTAAATGAGAA+CGG | - | chr7.3:62871970-62871989 | None:intergenic | 35.0% | |
| GAAATTTCAAGAAGATTGCC+AGG | + | chr7.3:62872841-62872860 | MS.gene037204:CDS | 35.0% | |
| GCACATGAATGGAAACAAAT+TGG | + | chr7.3:62872678-62872697 | MS.gene037204:intron | 35.0% | |
| GCAGGAAATCAATTTCATGA+AGG | + | chr7.3:62873083-62873102 | MS.gene037204:CDS | 35.0% | |
| GTTGTCTCCAAATATGTTGT+GGG | - | chr7.3:62872815-62872834 | None:intergenic | 35.0% | |
| TAAAACAATGCATGGAGAGA+TGG | + | chr7.3:62872259-62872278 | MS.gene037204:CDS | 35.0% | |
| TAAGCAGCAGAATACTATTC+AGG | + | chr7.3:62871983-62872002 | MS.gene037204:CDS | 35.0% | |
| TAAGGAACATCATATGGATG+AGG | + | chr7.3:62871878-62871897 | MS.gene037204:CDS | 35.0% | |
| TATCCACCAAATTCATCTTC+TGG | - | chr7.3:62872994-62873013 | None:intergenic | 35.0% | |
| TCGATTTAGAAAGAGATCCA+CGG | - | chr7.3:62872232-62872251 | None:intergenic | 35.0% | |
| TGCTTATGGTAAATGAGAAC+GGG | - | chr7.3:62871969-62871988 | None:intergenic | 35.0% | |
| TGGATCTCTTTCTAAATCGA+TGG | + | chr7.3:62872232-62872251 | MS.gene037204:CDS | 35.0% | |
| ! | AATTTCATGAAGGCCTTATG+TGG | + | chr7.3:62873093-62873112 | MS.gene037204:CDS | 35.0% |
| ! | AGTTTTGCAACCAGTGAAAT+TGG | + | chr7.3:62871915-62871934 | MS.gene037204:CDS | 35.0% |
| ! | CTTAATTTTCACCATGTTCC+TGG | - | chr7.3:62872935-62872954 | None:intergenic | 35.0% |
| ! | GAAATTGATTTCCTGCTTCA+TGG | - | chr7.3:62873079-62873098 | None:intergenic | 35.0% |
| ! | GAATAGTATTCTGCTGCTTA+TGG | - | chr7.3:62871983-62872002 | None:intergenic | 35.0% |
| !! | TCTCTCCATGCATTGTTTTA+AGG | - | chr7.3:62872259-62872278 | None:intergenic | 35.0% |
| !!! | CATGTTCCTGGATTTTTTCT+TGG | - | chr7.3:62872923-62872942 | None:intergenic | 35.0% |
| ACATAACTATCGTTACGTCC+TGG | - | chr7.3:62872862-62872881 | None:intergenic | 40.0% | |
| ACTCCAGAAGATGAATTTGG+TGG | + | chr7.3:62872988-62873007 | MS.gene037204:CDS | 40.0% | |
| GATCAAGCCCACAACATATT+TGG | + | chr7.3:62872805-62872824 | MS.gene037204:CDS | 40.0% | |
| TGGTTGCAAAACTAGAGTGA+TGG | - | chr7.3:62871908-62871927 | None:intergenic | 40.0% | |
| ! | TAGCATTTTTGTCGAATCCG+TGG | + | chr7.3:62872212-62872231 | MS.gene037204:intron | 40.0% |
| ! | TTCTTACATTTGAGACCGGA+GGG | + | chr7.3:62872636-62872655 | MS.gene037204:intron | 40.0% |
| ! | TTTCTTACATTTGAGACCGG+AGG | + | chr7.3:62872635-62872654 | MS.gene037204:intron | 40.0% |
| !! | TGGATTAGAGTTTTATCCCG+AGG | + | chr7.3:62873050-62873069 | MS.gene037204:CDS | 40.0% |
| GTAGAATGAGCCATTGAGTG+AGG | + | chr7.3:62872765-62872784 | MS.gene037204:intron | 45.0% | |
| ! | GGCATTCTCGACTTGCTTAA+TGG | - | chr7.3:62872902-62872921 | None:intergenic | 45.0% |
| ! | TGAGAACGGGTTCTTGATCA+TGG | - | chr7.3:62871956-62871975 | None:intergenic | 45.0% |
| ! | TTTTGCTCCTCCTCACTCAA+TGG | - | chr7.3:62872778-62872797 | None:intergenic | 45.0% |
| !!! | TTTTTTTTATTTATTTTATG+CGG | - | chr7.3:62872410-62872429 | None:intergenic | 5.0% |
| GAATGAGCCATTGAGTGAGG+AGG | + | chr7.3:62872768-62872787 | MS.gene037204:intron | 50.0% | |
| TTCCTGCTTCATGGGAACCT+CGG | - | chr7.3:62873070-62873089 | None:intergenic | 50.0% | |
| TCCTGCTTCATGGGAACCTC+GGG | - | chr7.3:62873069-62873088 | None:intergenic | 55.0% | |
| TCCCGAGGTTCCCATGAAGC+AGG | + | chr7.3:62873065-62873084 | MS.gene037204:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 62871843 | 62873125 | 62871843 | ID=MS.gene037204 |
| chr7.3 | mRNA | 62871843 | 62873125 | 62871843 | ID=MS.gene037204.t1;Parent=MS.gene037204 |
| chr7.3 | exon | 62871843 | 62872072 | 62871843 | ID=MS.gene037204.t1.exon1;Parent=MS.gene037204.t1 |
| chr7.3 | CDS | 62871843 | 62872072 | 62871843 | ID=cds.MS.gene037204.t1;Parent=MS.gene037204.t1 |
| chr7.3 | exon | 62872215 | 62872305 | 62872215 | ID=MS.gene037204.t1.exon2;Parent=MS.gene037204.t1 |
| chr7.3 | CDS | 62872215 | 62872305 | 62872215 | ID=cds.MS.gene037204.t1;Parent=MS.gene037204.t1 |
| chr7.3 | exon | 62872769 | 62873125 | 62872769 | ID=MS.gene037204.t1.exon3;Parent=MS.gene037204.t1 |
| chr7.3 | CDS | 62872769 | 62873125 | 62872769 | ID=cds.MS.gene037204.t1;Parent=MS.gene037204.t1 |
| Gene Sequence |
| Protein sequence |
