Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037360.t1 | XP_003592726.1 | 97.8 | 230 | 2 | 1 | 30 | 259 | 31 | 257 | 1.20E-86 | 329.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037360.t1 | Q9FMX2 | 69.0 | 232 | 42 | 5 | 33 | 257 | 40 | 248 | 6.3e-60 | 232.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037360.t1 | G7IE92 | 97.8 | 230 | 2 | 1 | 30 | 259 | 31 | 257 | 8.7e-87 | 329.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene037360.t1 | TF | TCP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037360.t1 | MTR_1g114380 | 97.692 | 260 | 2 | 2 | 1 | 259 | 1 | 257 | 0.0 | 508 |
MS.gene037360.t1 | MTR_1g038650 | 61.111 | 252 | 53 | 7 | 17 | 257 | 16 | 233 | 2.33e-79 | 239 |
MS.gene037360.t1 | MTR_5g039600 | 65.217 | 115 | 29 | 3 | 7 | 114 | 39 | 149 | 3.51e-42 | 149 |
MS.gene037360.t1 | MTR_2g006150 | 74.737 | 95 | 21 | 1 | 26 | 117 | 121 | 215 | 4.69e-41 | 146 |
MS.gene037360.t1 | MTR_2g006150 | 64.957 | 117 | 26 | 2 | 4 | 117 | 111 | 215 | 6.32e-41 | 147 |
MS.gene037360.t1 | MTR_7g028160 | 65.000 | 100 | 28 | 2 | 19 | 118 | 37 | 129 | 4.03e-37 | 132 |
MS.gene037360.t1 | MTR_4g108370 | 75.309 | 81 | 15 | 1 | 26 | 101 | 86 | 166 | 2.81e-36 | 134 |
MS.gene037360.t1 | MTR_1g063870 | 73.418 | 79 | 17 | 2 | 19 | 94 | 34 | 111 | 1.07e-34 | 124 |
MS.gene037360.t1 | MTR_1g101810 | 62.626 | 99 | 31 | 2 | 10 | 106 | 40 | 134 | 1.53e-32 | 122 |
MS.gene037360.t1 | MTR_1g101810 | 62.626 | 99 | 31 | 2 | 10 | 106 | 70 | 164 | 3.13e-32 | 121 |
MS.gene037360.t1 | MTR_8g033070 | 70.130 | 77 | 23 | 0 | 28 | 104 | 76 | 152 | 1.65e-31 | 119 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037360.t1 | AT5G23280 | 64.961 | 254 | 56 | 9 | 12 | 257 | 20 | 248 | 2.48e-96 | 283 |
MS.gene037360.t1 | AT5G08330 | 55.351 | 271 | 75 | 8 | 1 | 259 | 1 | 237 | 5.49e-77 | 233 |
MS.gene037360.t1 | AT1G58100 | 77.907 | 86 | 19 | 0 | 33 | 118 | 61 | 146 | 6.95e-41 | 145 |
MS.gene037360.t1 | AT1G35560 | 74.444 | 90 | 23 | 0 | 29 | 118 | 52 | 141 | 2.74e-39 | 139 |
MS.gene037360.t1 | AT1G72010 | 78.571 | 84 | 17 | 1 | 26 | 109 | 58 | 140 | 2.79e-39 | 140 |
MS.gene037360.t1 | AT3G47620 | 76.829 | 82 | 14 | 1 | 25 | 101 | 105 | 186 | 1.82e-37 | 137 |
MS.gene037360.t1 | AT1G69690 | 75.949 | 79 | 14 | 1 | 28 | 101 | 43 | 121 | 8.34e-37 | 132 |
MS.gene037360.t1 | AT3G27010 | 75.342 | 73 | 18 | 0 | 21 | 93 | 67 | 139 | 2.15e-33 | 123 |
MS.gene037360.t1 | AT3G27010 | 75.342 | 73 | 18 | 0 | 21 | 93 | 67 | 139 | 2.15e-33 | 123 |
MS.gene037360.t1 | AT5G51910 | 65.517 | 87 | 30 | 0 | 18 | 104 | 43 | 129 | 5.99e-33 | 122 |
MS.gene037360.t1 | AT5G51910 | 65.517 | 87 | 30 | 0 | 18 | 104 | 43 | 129 | 5.99e-33 | 122 |
MS.gene037360.t1 | AT2G45680 | 62.366 | 93 | 28 | 1 | 27 | 119 | 70 | 155 | 4.87e-32 | 120 |
MS.gene037360.t1 | AT5G41030 | 66.176 | 68 | 23 | 0 | 28 | 95 | 64 | 131 | 8.51e-28 | 107 |
MS.gene037360.t1 | AT2G37000 | 76.271 | 59 | 14 | 0 | 33 | 91 | 44 | 102 | 7.43e-27 | 103 |
MS.gene037360.t1 | AT3G45150 | 42.742 | 124 | 47 | 4 | 21 | 122 | 8 | 129 | 7.68e-21 | 86.7 |
MS.gene037360.t1 | AT1G58100 | 54.651 | 86 | 15 | 1 | 33 | 118 | 61 | 122 | 1.54e-19 | 87.0 |
Find 81 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCAACACCGGCGGCTCTT+TGG | 0.201653 | 1.3:+77568395 | MS.gene037360:CDS |
AGGAGAAGGGAGAGAGTTAT+TGG | 0.218287 | 1.3:-77568245 | None:intergenic |
TTACCTGCACGGCCTGATTT+TGG | 0.227364 | 1.3:+77568421 | MS.gene037360:CDS |
TTCAACACCGGCGGCTCTTT+GGG | 0.244327 | 1.3:+77568396 | MS.gene037360:CDS |
CGGCTAGTTGTTGTCGGTTT+GGG | 0.288031 | 1.3:-77567985 | None:intergenic |
TCTCCTACGCCGTTCATTCT+CGG | 0.325836 | 1.3:+77568301 | MS.gene037360:CDS |
AATTTGCTTGCTTCGTTGTC+TGG | 0.328042 | 1.3:+77568643 | MS.gene037360:CDS |
TTCCAGCTCACACGCGAATT+AGG | 0.343017 | 1.3:+77568097 | MS.gene037360:CDS |
GTGGTTGTTGTGGTTCCGTC+GGG | 0.345468 | 1.3:-77567938 | None:intergenic |
ACGGCTAGTTGTTGTCGGTT+TGG | 0.352057 | 1.3:-77567986 | None:intergenic |
AGCTTTGCTGCTGCTGCCGC+CGG | 0.352446 | 1.3:+77568454 | MS.gene037360:CDS |
TCTCTCTCCGTTTCACTTCG+TGG | 0.367948 | 1.3:+77568220 | MS.gene037360:CDS |
TCTGGTGGACATGGAAATTC+TGG | 0.390225 | 1.3:+77568661 | MS.gene037360:CDS |
TGCTCCTCCGCCGGAAATGA+TGG | 0.394211 | 1.3:+77568477 | MS.gene037360:CDS |
ACAACAGCATCAACAAGTTA+TGG | 0.406472 | 1.3:+77568573 | MS.gene037360:CDS |
GGTACCGGTGGCGGCGATGA+TGG | 0.418821 | 1.3:-77568173 | None:intergenic |
AAAGACTGAACCATCATTTC+CGG | 0.426674 | 1.3:-77568487 | None:intergenic |
ACACGTGCGGCGCATATGAT+TGG | 0.431664 | 1.3:-77568073 | None:intergenic |
GTGAAGTGGAGGAAGGAGAA+GGG | 0.432577 | 1.3:-77568258 | None:intergenic |
CTCCAAATTTGACCAAAATC+AGG | 0.435338 | 1.3:-77568433 | None:intergenic |
GGTGGTTGTTGTGGTTCCGT+CGG | 0.438388 | 1.3:-77567939 | None:intergenic |
CTCTTTGGGCTTTACCTGCA+CGG | 0.438680 | 1.3:+77568410 | MS.gene037360:CDS |
CGCCGGAGTTGTGCCGGTAC+CGG | 0.440402 | 1.3:-77568188 | None:intergenic |
TGCCGCCGGTGCTCCTCCGC+CGG | 0.444737 | 1.3:+77568468 | MS.gene037360:CDS |
AAAGATGATGCTCTTTCTGT+TGG | 0.447514 | 1.3:+77568367 | MS.gene037360:CDS |
CAACAGCATCAACAAGTTAT+GGG | 0.456904 | 1.3:+77568574 | MS.gene037360:CDS |
AGTGAAGTGGAGGAAGGAGA+AGG | 0.462868 | 1.3:-77568259 | None:intergenic |
ATCATCGCCGCCACCGGTAC+CGG | 0.463092 | 1.3:+77568175 | MS.gene037360:CDS |
TTTGTCTCAGCAGCAACATC+AGG | 0.466168 | 1.3:+77568507 | MS.gene037360:CDS |
ATATGATTGGCATACGAATA+CGG | 0.468808 | 1.3:-77568060 | None:intergenic |
AGAGTTGGGAATTATCTTCC+TGG | 0.477725 | 1.3:+77568613 | MS.gene037360:CDS |
AGTTGTGCCGGTACCGGTGG+CGG | 0.478006 | 1.3:-77568182 | None:intergenic |
CACAGTAAAGTCGACGGCCG+TGG | 0.489495 | 1.3:+77568034 | MS.gene037360:CDS |
ACCGGTGGCGGCGATGATGG+AGG | 0.492286 | 1.3:-77568170 | None:intergenic |
TGGTCGAGTGAAGTGGAGGA+AGG | 0.494112 | 1.3:-77568265 | None:intergenic |
GACCTAATTCGCGTGTGAGC+TGG | 0.494851 | 1.3:-77568099 | None:intergenic |
CATTTCCGGCGGAGGAGCAC+CGG | 0.501079 | 1.3:-77568473 | None:intergenic |
GCTTCGTTGTCTGGTGGACA+TGG | 0.503221 | 1.3:+77568652 | MS.gene037360:CDS |
CCCTCCATCATCGCCGCCAC+CGG | 0.503587 | 1.3:+77568169 | MS.gene037360:CDS |
GAAGCTTCAGCTGCTAGAGT+TGG | 0.504823 | 1.3:+77568598 | MS.gene037360:CDS |
AAGCTTCAGCTGCTAGAGTT+GGG | 0.504829 | 1.3:+77568599 | MS.gene037360:CDS |
TGATGGAGGGTTCAGCTTGA+CGG | 0.505105 | 1.3:-77568156 | None:intergenic |
CACCGGTACCGGCACAACTC+CGG | 0.512438 | 1.3:+77568186 | MS.gene037360:CDS |
TGACCAAAATCAGGCCGTGC+AGG | 0.513660 | 1.3:-77568424 | None:intergenic |
TAGGAGAGAGAAGCGGTTTG+TGG | 0.517147 | 1.3:-77568285 | None:intergenic |
GATTGAACCGTTCGTGGTGG+TGG | 0.518024 | 1.3:-77567957 | None:intergenic |
TTGCTTGCTTCGTTGTCTGG+TGG | 0.525229 | 1.3:+77568646 | MS.gene037360:CDS |
TGAACCATCATTTCCGGCGG+AGG | 0.529418 | 1.3:-77568481 | None:intergenic |
CCATTCGATGGTTTGACCGT+CGG | 0.532798 | 1.3:-77568128 | None:intergenic |
GGTTCCGTCGGGGTTAGACA+TGG | 0.533278 | 1.3:-77567927 | None:intergenic |
CCGGTGGCGGCGATGATGGA+GGG | 0.534932 | 1.3:-77568169 | None:intergenic |
TGTTGGTTCTCTTTCAACAC+CGG | 0.535689 | 1.3:+77568384 | MS.gene037360:CDS |
GTTCGTGGTGGTGGTTGTTG+TGG | 0.536799 | 1.3:-77567948 | None:intergenic |
GTCAATGATTGAACCGTTCG+TGG | 0.543005 | 1.3:-77567963 | None:intergenic |
ATTGGAGCCACGAAGTGAAA+CGG | 0.550877 | 1.3:-77568227 | None:intergenic |
TTCCGGCGGAGGAGCACCGG+CGG | 0.553371 | 1.3:-77568470 | None:intergenic |
GAAACTCGCCGGAGTTGTGC+CGG | 0.558752 | 1.3:-77568194 | None:intergenic |
CGGTTTGTGGTCGAGTGAAG+TGG | 0.560737 | 1.3:-77568272 | None:intergenic |
GCAAGCAAATTGAGATGACC+AGG | 0.567406 | 1.3:-77568631 | None:intergenic |
GCATACGAATACGGCGTCCA+CGG | 0.572506 | 1.3:-77568051 | None:intergenic |
TTGACGGAGGAGCCATTCGA+TGG | 0.578156 | 1.3:-77568140 | None:intergenic |
CGGAGTTGTGCCGGTACCGG+TGG | 0.579827 | 1.3:-77568185 | None:intergenic |
ACAACAACCACCACCACGAA+CGG | 0.585335 | 1.3:+77567950 | MS.gene037360:CDS |
GGTAAAGCCCAAAGAGCCGC+CGG | 0.587790 | 1.3:-77568403 | None:intergenic |
ATACGTTTACCGAGAATGAA+CGG | 0.599547 | 1.3:-77568310 | None:intergenic |
GGCCGTCGACTTTACTGTGA+CGG | 0.604244 | 1.3:-77568030 | None:intergenic |
GAGAGAGAAGAGAAACTCGC+CGG | 0.605189 | 1.3:-77568205 | None:intergenic |
CCGACGGTCAAACCATCGAA+TGG | 0.640967 | 1.3:+77568128 | MS.gene037360:CDS |
TTTGTGGTCGAGTGAAGTGG+AGG | 0.647959 | 1.3:-77568269 | None:intergenic |
TTACCGAGAATGAACGGCGT+AGG | 0.649539 | 1.3:-77568304 | None:intergenic |
TGGTTGTTGTGGTTCCGTCG+GGG | 0.652839 | 1.3:-77567937 | None:intergenic |
GACTGAACCATCATTTCCGG+CGG | 0.662606 | 1.3:-77568484 | None:intergenic |
GACCGTCACAGTAAAGTCGA+CGG | 0.664072 | 1.3:+77568028 | MS.gene037360:CDS |
TGGTTCTCTTTCAACACCGG+CGG | 0.671866 | 1.3:+77568387 | MS.gene037360:CDS |
GTGGACATGGAAATTCTGGT+CGG | 0.673965 | 1.3:+77568665 | MS.gene037360:CDS |
TGTGAGCTGGAAGACACGTG+CGG | 0.686113 | 1.3:-77568086 | None:intergenic |
AAAACCATGTCTAACCCCGA+CGG | 0.687631 | 1.3:+77567923 | None:intergenic |
TGGAGGGTTCAGCTTGACGG+AGG | 0.697001 | 1.3:-77568153 | None:intergenic |
GAATTAGGTCACAAATCCGA+CGG | 0.701084 | 1.3:+77568112 | MS.gene037360:CDS |
AATGATTGAACCGTTCGTGG+TGG | 0.703659 | 1.3:-77567960 | None:intergenic |
AACGGCGTAGGAGAGAGAAG+CGG | 0.760443 | 1.3:-77568292 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATATGATTGGCATACGAATA+CGG | - | chr1.3:77568063-77568082 | None:intergenic | 30.0% | |
AAAGACTGAACCATCATTTC+CGG | - | chr1.3:77568490-77568509 | None:intergenic | 35.0% | |
AAAGATGATGCTCTTTCTGT+TGG | + | chr1.3:77568367-77568386 | MS.gene037360:CDS | 35.0% | |
ACAACAGCATCAACAAGTTA+TGG | + | chr1.3:77568573-77568592 | MS.gene037360:CDS | 35.0% | |
ATACGTTTACCGAGAATGAA+CGG | - | chr1.3:77568313-77568332 | None:intergenic | 35.0% | |
CAACAGCATCAACAAGTTAT+GGG | + | chr1.3:77568574-77568593 | MS.gene037360:CDS | 35.0% | |
CTCCAAATTTGACCAAAATC+AGG | - | chr1.3:77568436-77568455 | None:intergenic | 35.0% | |
AGAGTTGGGAATTATCTTCC+TGG | + | chr1.3:77568613-77568632 | MS.gene037360:CDS | 40.0% | |
GAATTAGGTCACAAATCCGA+CGG | + | chr1.3:77568112-77568131 | MS.gene037360:CDS | 40.0% | |
! | AATTTGCTTGCTTCGTTGTC+TGG | + | chr1.3:77568643-77568662 | MS.gene037360:CDS | 40.0% |
!! | GGCCTGATTTTGGTCAAATT+TGG | + | chr1.3:77568431-77568450 | MS.gene037360:CDS | 40.0% |
!! | TGTTGGTTCTCTTTCAACAC+CGG | + | chr1.3:77568384-77568403 | MS.gene037360:CDS | 40.0% |
!! | TTTTGACGGCTAGTTGTTGT+CGG | - | chr1.3:77567994-77568013 | None:intergenic | 40.0% |
AAGCTTCAGCTGCTAGAGTT+GGG | + | chr1.3:77568599-77568618 | MS.gene037360:CDS | 45.0% | |
AATGATTGAACCGTTCGTGG+TGG | - | chr1.3:77567963-77567982 | None:intergenic | 45.0% | |
AGGAGAAGGGAGAGAGTTAT+TGG | - | chr1.3:77568248-77568267 | None:intergenic | 45.0% | |
ATTGGAGCCACGAAGTGAAA+CGG | - | chr1.3:77568230-77568249 | None:intergenic | 45.0% | |
GCAAGCAAATTGAGATGACC+AGG | - | chr1.3:77568634-77568653 | None:intergenic | 45.0% | |
GTCAATGATTGAACCGTTCG+TGG | - | chr1.3:77567966-77567985 | None:intergenic | 45.0% | |
GTGGACATGGAAATTCTGGT+CGG | + | chr1.3:77568665-77568684 | MS.gene037360:CDS | 45.0% | |
TTTGTCTCAGCAGCAACATC+AGG | + | chr1.3:77568507-77568526 | MS.gene037360:CDS | 45.0% | |
! | TCTGGTGGACATGGAAATTC+TGG | + | chr1.3:77568661-77568680 | MS.gene037360:CDS | 45.0% |
! | TTACTGTGACGGTCTTTTGC+CGG | - | chr1.3:77568022-77568041 | None:intergenic | 45.0% |
!! | TTTTGCCGGCGGTTTTTTGA+CGG | - | chr1.3:77568008-77568027 | None:intergenic | 45.0% |
ACAACAACCACCACCACGAA+CGG | + | chr1.3:77567950-77567969 | MS.gene037360:CDS | 50.0% | |
ACTAGCCGTCAAAAAACCGC+CGG | + | chr1.3:77568000-77568019 | MS.gene037360:CDS | 50.0% | |
AGTGAAGTGGAGGAAGGAGA+AGG | - | chr1.3:77568262-77568281 | None:intergenic | 50.0% | |
CCATTCGATGGTTTGACCGT+CGG | - | chr1.3:77568131-77568150 | None:intergenic | 50.0% | |
CTCTTTGGGCTTTACCTGCA+CGG | + | chr1.3:77568410-77568429 | MS.gene037360:CDS | 50.0% | |
GAAGCTTCAGCTGCTAGAGT+TGG | + | chr1.3:77568598-77568617 | MS.gene037360:CDS | 50.0% | |
GACCGTCACAGTAAAGTCGA+CGG | + | chr1.3:77568028-77568047 | MS.gene037360:CDS | 50.0% | |
GACTGAACCATCATTTCCGG+CGG | - | chr1.3:77568487-77568506 | None:intergenic | 50.0% | |
GAGAGAGAAGAGAAACTCGC+CGG | - | chr1.3:77568208-77568227 | None:intergenic | 50.0% | |
GTGAAGTGGAGGAAGGAGAA+GGG | - | chr1.3:77568261-77568280 | None:intergenic | 50.0% | |
TAGGAGAGAGAAGCGGTTTG+TGG | - | chr1.3:77568288-77568307 | None:intergenic | 50.0% | |
TCTCCTACGCCGTTCATTCT+CGG | + | chr1.3:77568301-77568320 | MS.gene037360:CDS | 50.0% | |
TCTCTCTCCGTTTCACTTCG+TGG | + | chr1.3:77568220-77568239 | MS.gene037360:CDS | 50.0% | |
TGATGGAGGGTTCAGCTTGA+CGG | - | chr1.3:77568159-77568178 | None:intergenic | 50.0% | |
TGGTTCTCTTTCAACACCGG+CGG | + | chr1.3:77568387-77568406 | MS.gene037360:CDS | 50.0% | |
TTACCGAGAATGAACGGCGT+AGG | - | chr1.3:77568307-77568326 | None:intergenic | 50.0% | |
TTCCAGCTCACACGCGAATT+AGG | + | chr1.3:77568097-77568116 | MS.gene037360:CDS | 50.0% | |
TTGCTTGCTTCGTTGTCTGG+TGG | + | chr1.3:77568646-77568665 | MS.gene037360:CDS | 50.0% | |
TTTGTGGTCGAGTGAAGTGG+AGG | - | chr1.3:77568272-77568291 | None:intergenic | 50.0% | |
! | ACGGCTAGTTGTTGTCGGTT+TGG | - | chr1.3:77567989-77568008 | None:intergenic | 50.0% |
! | TTACCTGCACGGCCTGATTT+TGG | + | chr1.3:77568421-77568440 | MS.gene037360:CDS | 50.0% |
!! | CGGCTAGTTGTTGTCGGTTT+GGG | - | chr1.3:77567988-77568007 | None:intergenic | 50.0% |
AACGGCGTAGGAGAGAGAAG+CGG | - | chr1.3:77568295-77568314 | None:intergenic | 55.0% | |
ACACGTGCGGCGCATATGAT+TGG | - | chr1.3:77568076-77568095 | None:intergenic | 55.0% | |
CCGACGGTCAAACCATCGAA+TGG | + | chr1.3:77568128-77568147 | MS.gene037360:CDS | 55.0% | |
CGGTTTGTGGTCGAGTGAAG+TGG | - | chr1.3:77568275-77568294 | None:intergenic | 55.0% | |
GACCTAATTCGCGTGTGAGC+TGG | - | chr1.3:77568102-77568121 | None:intergenic | 55.0% | |
GATTGAACCGTTCGTGGTGG+TGG | - | chr1.3:77567960-77567979 | None:intergenic | 55.0% | |
GCATACGAATACGGCGTCCA+CGG | - | chr1.3:77568054-77568073 | None:intergenic | 55.0% | |
GGTGGTTGTTGTGGTTCCGT+CGG | - | chr1.3:77567942-77567961 | None:intergenic | 55.0% | |
GTGGTTGTTGTGGTTCCGTC+GGG | - | chr1.3:77567941-77567960 | None:intergenic | 55.0% | |
TGAACCATCATTTCCGGCGG+AGG | - | chr1.3:77568484-77568503 | None:intergenic | 55.0% | |
TGACCAAAATCAGGCCGTGC+AGG | - | chr1.3:77568427-77568446 | None:intergenic | 55.0% | |
TGGTCGAGTGAAGTGGAGGA+AGG | - | chr1.3:77568268-77568287 | None:intergenic | 55.0% | |
TGGTTGTTGTGGTTCCGTCG+GGG | - | chr1.3:77567940-77567959 | None:intergenic | 55.0% | |
TGTGAGCTGGAAGACACGTG+CGG | - | chr1.3:77568089-77568108 | None:intergenic | 55.0% | |
TTCAACACCGGCGGCTCTTT+GGG | + | chr1.3:77568396-77568415 | MS.gene037360:CDS | 55.0% | |
TTGACGGAGGAGCCATTCGA+TGG | - | chr1.3:77568143-77568162 | None:intergenic | 55.0% | |
TTTCAACACCGGCGGCTCTT+TGG | + | chr1.3:77568395-77568414 | MS.gene037360:CDS | 55.0% | |
! | GCTTCGTTGTCTGGTGGACA+TGG | + | chr1.3:77568652-77568671 | MS.gene037360:CDS | 55.0% |
!! | GGCCGTCGACTTTACTGTGA+CGG | - | chr1.3:77568033-77568052 | None:intergenic | 55.0% |
!! | GTTCGTGGTGGTGGTTGTTG+TGG | - | chr1.3:77567951-77567970 | None:intergenic | 55.0% |
CACAGTAAAGTCGACGGCCG+TGG | + | chr1.3:77568034-77568053 | MS.gene037360:CDS | 60.0% | |
GAAACTCGCCGGAGTTGTGC+CGG | - | chr1.3:77568197-77568216 | None:intergenic | 60.0% | |
GGTAAAGCCCAAAGAGCCGC+CGG | - | chr1.3:77568406-77568425 | None:intergenic | 60.0% | |
TGCTCCTCCGCCGGAAATGA+TGG | + | chr1.3:77568477-77568496 | MS.gene037360:CDS | 60.0% | |
TGGAGGGTTCAGCTTGACGG+AGG | - | chr1.3:77568156-77568175 | None:intergenic | 60.0% | |
! | CTGTGACGGTCTTTTGCCGG+CGG | - | chr1.3:77568019-77568038 | None:intergenic | 60.0% |
AGCTTTGCTGCTGCTGCCGC+CGG | + | chr1.3:77568454-77568473 | MS.gene037360:CDS | 65.0% | |
ATCATCGCCGCCACCGGTAC+CGG | + | chr1.3:77568175-77568194 | MS.gene037360:CDS | 65.0% | |
! | CATTTCCGGCGGAGGAGCAC+CGG | - | chr1.3:77568476-77568495 | None:intergenic | 65.0% |
!! | AGTTGTGCCGGTACCGGTGG+CGG | - | chr1.3:77568185-77568204 | None:intergenic | 65.0% |
!! | CACCGGTACCGGCACAACTC+CGG | + | chr1.3:77568186-77568205 | MS.gene037360:CDS | 65.0% |
CCCTCCATCATCGCCGCCAC+CGG | + | chr1.3:77568169-77568188 | MS.gene037360:CDS | 70.0% | |
! | ACCGGTGGCGGCGATGATGG+AGG | - | chr1.3:77568173-77568192 | None:intergenic | 70.0% |
! | CGCCGGAGTTGTGCCGGTAC+CGG | - | chr1.3:77568191-77568210 | None:intergenic | 70.0% |
! | CGGAGTTGTGCCGGTACCGG+TGG | - | chr1.3:77568188-77568207 | None:intergenic | 70.0% |
!! | CCGGTGGCGGCGATGATGGA+GGG | - | chr1.3:77568172-77568191 | None:intergenic | 70.0% |
!! | GGTACCGGTGGCGGCGATGA+TGG | - | chr1.3:77568176-77568195 | None:intergenic | 70.0% |
!! | TTCCGGCGGAGGAGCACCGG+CGG | - | chr1.3:77568473-77568492 | None:intergenic | 75.0% |
! | TGCCGCCGGTGCTCCTCCGC+CGG | + | chr1.3:77568468-77568487 | MS.gene037360:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 77567929 | 77568708 | 77567929 | ID=MS.gene037360 |
chr1.3 | mRNA | 77567929 | 77568708 | 77567929 | ID=MS.gene037360.t1;Parent=MS.gene037360 |
chr1.3 | exon | 77567929 | 77568708 | 77567929 | ID=MS.gene037360.t1.exon1;Parent=MS.gene037360.t1 |
chr1.3 | CDS | 77567929 | 77568708 | 77567929 | ID=cds.MS.gene037360.t1;Parent=MS.gene037360.t1 |
Gene Sequence |
Protein sequence |