Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037585.t1 | PNX71799.1 | 84.2 | 443 | 67 | 2 | 218 | 659 | 140 | 580 | 5.10E-206 | 727.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037585.t1 | Q9SZL8 | 22.9 | 602 | 272 | 6 | 19 | 429 | 40 | 640 | 2.4e-39 | 165.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037585.t1 | A0A2K3KZX1 | 84.2 | 443 | 67 | 2 | 218 | 659 | 140 | 580 | 3.6e-206 | 727.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene037585.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037585.t1 | MTR_0402s0040 | 29.616 | 547 | 284 | 16 | 45 | 582 | 25 | 479 | 1.04e-59 | 208 |
MS.gene037585.t1 | MTR_7g074790 | 34.463 | 177 | 92 | 4 | 40 | 213 | 4 | 159 | 7.10e-25 | 103 |
MS.gene037585.t1 | MTR_5g039760 | 35.088 | 171 | 82 | 3 | 48 | 215 | 12 | 156 | 1.52e-20 | 90.5 |
MS.gene037585.t1 | MTR_4g067290 | 35.714 | 168 | 89 | 6 | 46 | 201 | 56 | 216 | 1.94e-20 | 91.3 |
MS.gene037585.t1 | MTR_4g067290 | 35.714 | 168 | 89 | 6 | 46 | 201 | 76 | 236 | 2.93e-20 | 91.3 |
MS.gene037585.t1 | MTR_4g067290 | 35.714 | 168 | 89 | 6 | 46 | 201 | 116 | 276 | 5.23e-20 | 91.7 |
MS.gene037585.t1 | MTR_5g015480 | 39.264 | 163 | 84 | 7 | 14 | 165 | 19 | 177 | 9.93e-20 | 89.7 |
MS.gene037585.t1 | MTR_2g070590 | 42.857 | 105 | 56 | 3 | 45 | 146 | 16 | 119 | 1.02e-19 | 85.9 |
MS.gene037585.t1 | MTR_4g067290 | 34.940 | 166 | 91 | 6 | 46 | 201 | 56 | 214 | 1.05e-19 | 89.0 |
MS.gene037585.t1 | MTR_4g067290 | 34.940 | 166 | 91 | 6 | 46 | 201 | 74 | 232 | 1.54e-19 | 89.0 |
MS.gene037585.t1 | MTR_4g067290 | 34.940 | 166 | 91 | 6 | 46 | 201 | 76 | 234 | 1.58e-19 | 89.0 |
MS.gene037585.t1 | MTR_6g017200 | 44.330 | 97 | 50 | 3 | 45 | 138 | 57 | 152 | 2.23e-18 | 82.8 |
MS.gene037585.t1 | MTR_2g098920 | 40.367 | 109 | 61 | 3 | 46 | 152 | 80 | 186 | 3.13e-17 | 82.4 |
MS.gene037585.t1 | MTR_1g057920 | 42.453 | 106 | 52 | 5 | 34 | 133 | 21 | 123 | 7.78e-17 | 77.4 |
MS.gene037585.t1 | MTR_2g098880 | 37.097 | 124 | 64 | 5 | 35 | 149 | 49 | 167 | 9.00e-17 | 80.9 |
MS.gene037585.t1 | MTR_7g061980 | 35.294 | 119 | 71 | 3 | 40 | 155 | 4 | 119 | 9.77e-17 | 77.0 |
MS.gene037585.t1 | MTR_2g098880 | 37.097 | 124 | 64 | 5 | 35 | 149 | 61 | 179 | 1.03e-16 | 81.3 |
MS.gene037585.t1 | MTR_6g051425 | 27.692 | 195 | 134 | 2 | 47 | 236 | 18 | 210 | 1.81e-16 | 81.6 |
MS.gene037585.t1 | MTR_4g102720 | 29.310 | 174 | 85 | 4 | 41 | 212 | 2 | 139 | 4.71e-16 | 78.2 |
MS.gene037585.t1 | MTR_1g070355 | 27.807 | 187 | 128 | 3 | 50 | 231 | 78 | 262 | 5.27e-15 | 79.0 |
MS.gene037585.t1 | MTR_5g076070 | 26.415 | 212 | 138 | 6 | 6 | 205 | 10 | 215 | 8.44e-15 | 75.9 |
MS.gene037585.t1 | MTR_1g013060 | 31.609 | 174 | 109 | 3 | 41 | 206 | 19 | 190 | 9.92e-15 | 74.3 |
MS.gene037585.t1 | MTR_4g035820 | 23.798 | 416 | 246 | 11 | 32 | 383 | 61 | 469 | 1.95e-14 | 77.4 |
MS.gene037585.t1 | MTR_7g113010 | 34.375 | 128 | 66 | 3 | 46 | 170 | 457 | 569 | 2.68e-14 | 76.6 |
MS.gene037585.t1 | MTR_3g006370 | 42.202 | 109 | 58 | 3 | 46 | 150 | 50 | 157 | 3.91e-14 | 72.8 |
MS.gene037585.t1 | MTR_7g446520 | 29.224 | 219 | 133 | 7 | 3 | 218 | 46 | 245 | 2.42e-13 | 72.0 |
MS.gene037585.t1 | MTR_0137s0040 | 38.095 | 105 | 59 | 2 | 25 | 129 | 15 | 113 | 3.06e-13 | 67.0 |
MS.gene037585.t1 | MTR_6g022080 | 26.012 | 173 | 118 | 4 | 38 | 205 | 80 | 247 | 5.10e-13 | 69.7 |
MS.gene037585.t1 | MTR_2g014100 | 28.108 | 185 | 113 | 3 | 61 | 225 | 59 | 243 | 2.86e-12 | 67.8 |
MS.gene037585.t1 | MTR_1g008290 | 36.538 | 104 | 64 | 2 | 130 | 232 | 33 | 135 | 8.21e-12 | 63.9 |
MS.gene037585.t1 | MTR_3g450850 | 28.177 | 181 | 118 | 4 | 42 | 210 | 43 | 223 | 1.96e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037585.t1 | AT4G38180 | 30.137 | 219 | 152 | 1 | 212 | 429 | 422 | 640 | 7.36e-32 | 132 |
MS.gene037585.t1 | AT4G38180 | 34.101 | 217 | 131 | 4 | 19 | 224 | 40 | 255 | 6.12e-25 | 110 |
MS.gene037585.t1 | AT4G38170 | 24.367 | 316 | 217 | 6 | 118 | 423 | 96 | 399 | 3.73e-29 | 122 |
MS.gene037585.t1 | AT3G22170 | 29.918 | 244 | 165 | 3 | 219 | 462 | 414 | 651 | 5.06e-28 | 120 |
MS.gene037585.t1 | AT3G22170 | 29.918 | 244 | 165 | 3 | 219 | 462 | 414 | 651 | 5.06e-28 | 120 |
MS.gene037585.t1 | AT2G27110 | 27.857 | 280 | 193 | 5 | 212 | 489 | 369 | 641 | 4.62e-27 | 117 |
MS.gene037585.t1 | AT2G27110 | 27.857 | 280 | 193 | 5 | 212 | 489 | 369 | 641 | 4.62e-27 | 117 |
MS.gene037585.t1 | AT2G27110 | 27.402 | 281 | 193 | 5 | 212 | 489 | 224 | 496 | 5.78e-27 | 117 |
MS.gene037585.t1 | AT3G06250 | 29.958 | 237 | 150 | 4 | 214 | 443 | 497 | 724 | 2.27e-25 | 112 |
MS.gene037585.t1 | AT3G06250 | 37.302 | 126 | 64 | 3 | 22 | 147 | 7 | 117 | 1.27e-16 | 84.3 |
MS.gene037585.t1 | AT3G06250 | 28.708 | 209 | 107 | 7 | 30 | 237 | 174 | 341 | 5.75e-16 | 82.4 |
MS.gene037585.t1 | AT3G06250 | 29.958 | 237 | 150 | 4 | 214 | 443 | 497 | 724 | 2.27e-25 | 112 |
MS.gene037585.t1 | AT3G06250 | 37.302 | 126 | 64 | 3 | 22 | 147 | 7 | 117 | 1.27e-16 | 84.3 |
MS.gene037585.t1 | AT3G06250 | 28.708 | 209 | 107 | 7 | 30 | 237 | 174 | 341 | 5.75e-16 | 82.4 |
MS.gene037585.t1 | AT3G06250 | 29.958 | 237 | 150 | 4 | 214 | 443 | 497 | 724 | 2.27e-25 | 112 |
MS.gene037585.t1 | AT3G06250 | 37.302 | 126 | 64 | 3 | 22 | 147 | 7 | 117 | 1.27e-16 | 84.3 |
MS.gene037585.t1 | AT3G06250 | 28.708 | 209 | 107 | 7 | 30 | 237 | 174 | 341 | 5.75e-16 | 82.4 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 347 | 583 | 1.16e-24 | 110 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 347 | 583 | 1.16e-24 | 110 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 347 | 583 | 1.73e-24 | 109 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 347 | 583 | 1.73e-24 | 109 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 347 | 583 | 1.98e-24 | 109 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 290 | 526 | 2.18e-24 | 108 |
MS.gene037585.t1 | AT4G19990 | 29.876 | 241 | 163 | 2 | 213 | 451 | 361 | 597 | 2.24e-24 | 108 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 321 | 605 | 1.04e-23 | 107 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 321 | 605 | 1.04e-23 | 107 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 321 | 605 | 1.04e-23 | 107 |
MS.gene037585.t1 | AT2G32250 | 26.861 | 309 | 200 | 8 | 180 | 481 | 316 | 605 | 1.14e-23 | 107 |
MS.gene037585.t1 | AT2G32250 | 26.861 | 309 | 200 | 8 | 180 | 481 | 316 | 605 | 1.14e-23 | 107 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 280 | 564 | 1.19e-23 | 106 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 280 | 564 | 1.21e-23 | 106 |
MS.gene037585.t1 | AT2G32250 | 27.303 | 304 | 195 | 8 | 185 | 481 | 321 | 605 | 1.42e-23 | 106 |
MS.gene037585.t1 | AT5G18960 | 26.562 | 256 | 174 | 4 | 214 | 463 | 521 | 768 | 2.47e-23 | 105 |
MS.gene037585.t1 | AT5G18960 | 41.176 | 119 | 57 | 3 | 46 | 163 | 43 | 149 | 9.71e-18 | 88.2 |
MS.gene037585.t1 | AT5G18960 | 39.604 | 101 | 49 | 2 | 46 | 146 | 211 | 299 | 1.24e-14 | 78.2 |
MS.gene037585.t1 | AT5G18960 | 26.562 | 256 | 174 | 4 | 214 | 463 | 521 | 768 | 2.47e-23 | 105 |
MS.gene037585.t1 | AT5G18960 | 41.176 | 119 | 57 | 3 | 46 | 163 | 43 | 149 | 9.71e-18 | 88.2 |
MS.gene037585.t1 | AT5G18960 | 39.604 | 101 | 49 | 2 | 46 | 146 | 211 | 299 | 1.24e-14 | 78.2 |
MS.gene037585.t1 | AT4G15090 | 25.000 | 356 | 233 | 6 | 214 | 564 | 400 | 726 | 2.56e-23 | 105 |
MS.gene037585.t1 | AT4G15090 | 30.348 | 201 | 128 | 6 | 28 | 223 | 36 | 229 | 5.46e-14 | 76.3 |
MS.gene037585.t1 | AT4G15090 | 25.000 | 356 | 233 | 6 | 214 | 564 | 400 | 726 | 2.56e-23 | 105 |
MS.gene037585.t1 | AT4G15090 | 30.348 | 201 | 128 | 6 | 28 | 223 | 36 | 229 | 5.46e-14 | 76.3 |
MS.gene037585.t1 | AT4G15090 | 25.000 | 356 | 233 | 6 | 214 | 564 | 400 | 726 | 2.56e-23 | 105 |
MS.gene037585.t1 | AT4G15090 | 30.348 | 201 | 128 | 6 | 28 | 223 | 36 | 229 | 5.46e-14 | 76.3 |
MS.gene037585.t1 | AT4G15090 | 25.000 | 356 | 233 | 6 | 214 | 564 | 400 | 726 | 2.56e-23 | 105 |
MS.gene037585.t1 | AT4G15090 | 30.348 | 201 | 128 | 6 | 28 | 223 | 36 | 229 | 5.46e-14 | 76.3 |
MS.gene037585.t1 | AT4G15090 | 25.000 | 356 | 233 | 6 | 214 | 564 | 400 | 726 | 2.56e-23 | 105 |
MS.gene037585.t1 | AT4G15090 | 30.348 | 201 | 128 | 6 | 28 | 223 | 36 | 229 | 5.46e-14 | 76.3 |
MS.gene037585.t1 | AT1G76320 | 25.188 | 266 | 192 | 2 | 213 | 478 | 336 | 594 | 2.55e-21 | 99.4 |
MS.gene037585.t1 | AT1G76320 | 25.188 | 266 | 192 | 2 | 213 | 478 | 336 | 594 | 2.55e-21 | 99.4 |
MS.gene037585.t1 | AT1G76320 | 25.188 | 266 | 192 | 2 | 213 | 478 | 336 | 594 | 2.77e-21 | 99.4 |
MS.gene037585.t1 | AT1G76320 | 25.188 | 266 | 192 | 2 | 213 | 478 | 336 | 594 | 5.27e-21 | 98.2 |
MS.gene037585.t1 | AT3G59470 | 42.593 | 108 | 60 | 2 | 46 | 152 | 70 | 176 | 2.34e-20 | 91.7 |
MS.gene037585.t1 | AT3G59470 | 42.593 | 108 | 60 | 2 | 46 | 152 | 70 | 176 | 2.34e-20 | 91.7 |
MS.gene037585.t1 | AT3G59470 | 42.593 | 108 | 60 | 2 | 46 | 152 | 82 | 188 | 3.19e-20 | 91.3 |
MS.gene037585.t1 | AT3G07500 | 42.735 | 117 | 60 | 4 | 46 | 156 | 33 | 148 | 2.17e-18 | 84.7 |
MS.gene037585.t1 | AT1G52520 | 26.523 | 279 | 181 | 7 | 160 | 420 | 363 | 635 | 4.93e-18 | 89.0 |
MS.gene037585.t1 | AT1G52520 | 39.048 | 105 | 55 | 4 | 46 | 147 | 85 | 183 | 3.27e-11 | 67.0 |
MS.gene037585.t1 | AT1G10240 | 26.754 | 228 | 133 | 7 | 212 | 424 | 400 | 608 | 6.36e-17 | 85.1 |
MS.gene037585.t1 | AT1G10240 | 34.868 | 152 | 92 | 3 | 32 | 177 | 35 | 185 | 4.38e-16 | 82.4 |
MS.gene037585.t1 | AT1G10240 | 26.754 | 228 | 133 | 7 | 212 | 424 | 400 | 608 | 6.36e-17 | 85.1 |
MS.gene037585.t1 | AT1G10240 | 34.868 | 152 | 92 | 3 | 32 | 177 | 35 | 185 | 4.38e-16 | 82.4 |
MS.gene037585.t1 | AT4G12850 | 37.398 | 123 | 73 | 3 | 46 | 166 | 11 | 131 | 2.41e-15 | 73.9 |
MS.gene037585.t1 | AT5G28530 | 25.000 | 232 | 161 | 4 | 209 | 438 | 412 | 632 | 4.41e-15 | 79.3 |
MS.gene037585.t1 | AT5G28530 | 28.947 | 152 | 100 | 3 | 46 | 191 | 55 | 204 | 1.23e-13 | 74.7 |
MS.gene037585.t1 | AT5G28530 | 25.000 | 232 | 161 | 4 | 209 | 438 | 412 | 632 | 4.41e-15 | 79.3 |
MS.gene037585.t1 | AT5G28530 | 28.947 | 152 | 100 | 3 | 46 | 191 | 55 | 204 | 1.23e-13 | 74.7 |
MS.gene037585.t1 | AT5G28530 | 25.000 | 232 | 161 | 4 | 209 | 438 | 349 | 569 | 4.65e-15 | 79.3 |
MS.gene037585.t1 | AT5G28530 | 28.947 | 152 | 100 | 3 | 46 | 191 | 55 | 204 | 9.74e-14 | 75.1 |
MS.gene037585.t1 | AT5G28530 | 24.051 | 237 | 161 | 5 | 209 | 438 | 412 | 636 | 1.53e-14 | 77.8 |
MS.gene037585.t1 | AT5G28530 | 28.947 | 152 | 100 | 3 | 46 | 191 | 55 | 204 | 1.23e-13 | 74.7 |
MS.gene037585.t1 | AT5G28530 | 24.051 | 237 | 161 | 5 | 209 | 438 | 349 | 573 | 1.57e-14 | 77.4 |
MS.gene037585.t1 | AT5G28530 | 28.947 | 152 | 100 | 3 | 46 | 191 | 55 | 204 | 1.01e-13 | 75.1 |
MS.gene037585.t1 | AT4G12850 | 39.604 | 101 | 59 | 2 | 46 | 146 | 11 | 109 | 2.58e-14 | 70.9 |
MS.gene037585.t1 | AT4G12850 | 39.604 | 101 | 59 | 2 | 46 | 146 | 11 | 109 | 2.97e-14 | 72.0 |
MS.gene037585.t1 | AT1G80010 | 25.207 | 242 | 163 | 6 | 211 | 439 | 442 | 678 | 8.31e-12 | 68.9 |
MS.gene037585.t1 | AT2G43280 | 35.036 | 137 | 79 | 6 | 44 | 174 | 20 | 152 | 2.12e-11 | 64.3 |
Find 96 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATCTTGCATCCATTTATTT+TGG | 0.182893 | 4.3:+80977576 | None:intergenic |
ACTTTGATCTTCAGAGTTAA+AGG | 0.202395 | 4.3:+80977148 | None:intergenic |
GGTAATTTATGCTTACTTCT+AGG | 0.207796 | 4.3:+80978364 | None:intergenic |
ACCTCTTCAATATGTACTTT+TGG | 0.218894 | 4.3:+80977033 | None:intergenic |
CGATTTGCCACAACTATCTT+TGG | 0.225821 | 4.3:+80976948 | None:intergenic |
CCATTAGAATTCATATTTAC+TGG | 0.226524 | 4.3:+80979176 | None:intergenic |
TTATGTAGTACCTGCATAAT+TGG | 0.248682 | 4.3:+80976576 | None:intergenic |
TCTTGATATGTATGTGAAAA+TGG | 0.253215 | 4.3:+80976455 | None:intergenic |
AATTTATATGCTGGCTTTGT+TGG | 0.254717 | 4.3:-80978622 | MS.gene037585:CDS |
TACATGATGGCTTGTCTTCA+TGG | 0.309415 | 4.3:-80976025 | MS.gene037585:CDS |
TATTCAATGCAGGCATCTTC+TGG | 0.309663 | 4.3:+80977345 | None:intergenic |
ACGACCTTCACCAAAATAAA+TGG | 0.312043 | 4.3:-80977586 | MS.gene037585:CDS |
AATGACATGAATAACGAAAA+TGG | 0.314237 | 4.3:-80976290 | MS.gene037585:CDS |
GATAAATGACATGCGTTATA+AGG | 0.325984 | 4.3:-80977393 | MS.gene037585:CDS |
GAAGATGCCTGCATTGAATA+TGG | 0.336910 | 4.3:-80977342 | MS.gene037585:CDS |
GATGGTAAATCACGCATAAA+AGG | 0.338412 | 4.3:-80976690 | MS.gene037585:CDS |
GGAGAACACGGGGAAGAATT+TGG | 0.347555 | 4.3:-80976269 | MS.gene037585:CDS |
CTTCATTTCCTTCATCCTCT+TGG | 0.349382 | 4.3:+80978183 | None:intergenic |
TCAAACTCCATGCCAACATA+TGG | 0.373528 | 4.3:+80978673 | None:intergenic |
GTAATTTATGCTTACTTCTA+GGG | 0.397907 | 4.3:+80978365 | None:intergenic |
CCAGTAAATATGAATTCTAA+TGG | 0.398242 | 4.3:-80979176 | MS.gene037585:intron |
GGGATGCAAGCTCATGATTA+TGG | 0.399641 | 4.3:+80978386 | None:intergenic |
ATCATCTGTTACTATCTCAT+TGG | 0.408367 | 4.3:+80976752 | None:intergenic |
CGAACTAGAGAAAAGATAAC+TGG | 0.408912 | 4.3:+80977281 | None:intergenic |
ACATGATGGCTTGTCTTCAT+GGG | 0.409074 | 4.3:-80976024 | MS.gene037585:CDS |
TCAATTTCAACCAAGTCCTT+TGG | 0.409112 | 4.3:-80976150 | MS.gene037585:intron |
TACACATCAACAACAAATCT+TGG | 0.427855 | 4.3:-80976792 | MS.gene037585:CDS |
AGCAATGTCAATGAACCATT+AGG | 0.429016 | 4.3:-80979215 | MS.gene037585:CDS |
AGCACATGTTGTCATTAGTC+GGG | 0.431183 | 4.3:-80978449 | MS.gene037585:CDS |
GGTTTATCGCCACTCCCTAA+TGG | 0.444741 | 4.3:+80979200 | None:intergenic |
TCTCGTAAGGATATCAGAAC+TGG | 0.455278 | 4.3:-80978478 | MS.gene037585:CDS |
TCAAGCAGCTGAGGTAGAAA+TGG | 0.462861 | 4.3:-80978317 | MS.gene037585:CDS |
TCAAGCAAGGCTGCTGAAGA+TGG | 0.463547 | 4.3:-80976891 | MS.gene037585:CDS |
TAGCACATGTTGTCATTAGT+CGG | 0.467396 | 4.3:-80978450 | MS.gene037585:CDS |
GCAATGTCAATGAACCATTA+GGG | 0.473025 | 4.3:-80979214 | MS.gene037585:CDS |
CAATTAAGTGAGAGCTTCAA+TGG | 0.473964 | 4.3:-80977482 | MS.gene037585:CDS |
TGGATGTGTGCTAGACGGTA+AGG | 0.483878 | 4.3:-80976991 | MS.gene037585:CDS |
CATTCTACCGATGCTTATCA+TGG | 0.489055 | 4.3:-80976245 | MS.gene037585:CDS |
GTAGAAATGGCAAATCGATC+TGG | 0.489212 | 4.3:-80978304 | MS.gene037585:CDS |
AAATTCTAACACATTATAAG+TGG | 0.492971 | 4.3:+80977436 | None:intergenic |
GATCTATGTCGCACTGCAGT+AGG | 0.499374 | 4.3:-80976918 | MS.gene037585:CDS |
AAATCTATATGCATGGTCTT+CGG | 0.500652 | 4.3:+80978648 | None:intergenic |
GCTTAAAATACCAAAGGACT+TGG | 0.501002 | 4.3:+80976140 | None:intergenic |
GCGTGAAGAACCATATCAAT+TGG | 0.502432 | 4.3:+80975986 | None:intergenic |
CTCAACAAATGTAGAGCCTC+AGG | 0.502446 | 4.3:-80976189 | MS.gene037585:CDS |
GTCTTCATGGGGTGGAAACA+AGG | 0.516471 | 4.3:-80976012 | MS.gene037585:CDS |
AACCATCATGCCAATTATGC+AGG | 0.524501 | 4.3:-80976586 | MS.gene037585:intron |
TTCTGCTGCTCAAGCAGCTG+AGG | 0.524786 | 4.3:-80978326 | MS.gene037585:CDS |
AGCTAGTATTAGTACATCAC+AGG | 0.524897 | 4.3:-80976423 | MS.gene037585:intron |
CAAACTCCATGCCAACATAT+GGG | 0.526793 | 4.3:+80978674 | None:intergenic |
TAGGAATTTAGCTTACATGA+TGG | 0.535116 | 4.3:-80976038 | MS.gene037585:CDS |
TACCACTGTATCAAAAGCCA+TGG | 0.535613 | 4.3:-80976727 | MS.gene037585:CDS |
TTTAACTGCCAAGAGGATGA+AGG | 0.543689 | 4.3:-80978191 | MS.gene037585:CDS |
CAAGAGGATGAAGGAAATGA+AGG | 0.543859 | 4.3:-80978182 | MS.gene037585:CDS |
ATGATATCCATATTCAATGC+AGG | 0.546116 | 4.3:+80977335 | None:intergenic |
ATAAATTACCATCACAAAGG+AGG | 0.551834 | 4.3:-80978351 | MS.gene037585:CDS |
AGGATGAAGGAAATGAAGGA+AGG | 0.556547 | 4.3:-80978178 | MS.gene037585:intron |
GAAGATATAATCCCATATGT+TGG | 0.564964 | 4.3:-80978685 | MS.gene037585:CDS |
TAAATTACCATCACAAAGGA+GGG | 0.565763 | 4.3:-80978350 | MS.gene037585:CDS |
AAAAGTACATATTGAAGAGG+TGG | 0.567774 | 4.3:-80977031 | MS.gene037585:CDS |
TAATTTATGCTTACTTCTAG+GGG | 0.570523 | 4.3:+80978366 | None:intergenic |
GTCAATGAACCATTAGGGAG+TGG | 0.572938 | 4.3:-80979209 | MS.gene037585:CDS |
TTTATGAGTCAACACATTGG+AGG | 0.581099 | 4.3:-80978256 | MS.gene037585:CDS |
TTATGAGTCAACACATTGGA+GGG | 0.581501 | 4.3:-80978255 | MS.gene037585:CDS |
GTAAATCACGCATAAAAGGC+AGG | 0.583524 | 4.3:-80976686 | MS.gene037585:CDS |
AATTATAAAATCTATATGCA+TGG | 0.584715 | 4.3:+80978641 | None:intergenic |
CTCTTGTCCATGATAAGCAT+CGG | 0.585310 | 4.3:+80976238 | None:intergenic |
CCCAAAAGTACATATTGAAG+AGG | 0.586430 | 4.3:-80977034 | MS.gene037585:CDS |
TATAATCCCATATGTTGGCA+TGG | 0.590560 | 4.3:-80978680 | MS.gene037585:CDS |
CGGAGTGGATGTGTGCTAGA+CGG | 0.591833 | 4.3:-80976996 | MS.gene037585:CDS |
GAGTCAACACATTGGAGGGA+GGG | 0.592924 | 4.3:-80978251 | MS.gene037585:CDS |
CATGATGGCTTGTCTTCATG+GGG | 0.595058 | 4.3:-80976023 | MS.gene037585:CDS |
TACCTGCATAATTGGCATGA+TGG | 0.603981 | 4.3:+80976584 | None:intergenic |
AACTCAGCAGATGGTGCCTG+AGG | 0.610239 | 4.3:+80976173 | None:intergenic |
GGATGTGTGCTAGACGGTAA+GGG | 0.610653 | 4.3:-80976990 | MS.gene037585:CDS |
TGAGTCAACACATTGGAGGG+AGG | 0.614265 | 4.3:-80978252 | MS.gene037585:CDS |
GCAGAAACCCTCCTTTGTGA+TGG | 0.614369 | 4.3:+80978343 | None:intergenic |
ATTGGAGGGAGGGAGAATGT+TGG | 0.617700 | 4.3:-80978241 | MS.gene037585:CDS |
TTAGAATTCATATTTACTGG+AGG | 0.621664 | 4.3:+80979179 | None:intergenic |
AGAAGATCCAAAGATAGTTG+TGG | 0.622671 | 4.3:-80976955 | MS.gene037585:CDS |
TGCAGTAGGAATATCAAGCA+AGG | 0.624129 | 4.3:-80976904 | MS.gene037585:CDS |
AATAACGAAAATGGAGAACA+CGG | 0.627085 | 4.3:-80976281 | MS.gene037585:CDS |
AGAGGTGGACTAAACAAGCT+CGG | 0.635859 | 4.3:-80977016 | MS.gene037585:CDS |
GTCATTAGTCGGGAATCAAG+TGG | 0.642505 | 4.3:-80978439 | MS.gene037585:CDS |
ACCACTGTATCAAAAGCCAT+GGG | 0.643278 | 4.3:-80976726 | MS.gene037585:CDS |
AGCATAAATTACCATCACAA+AGG | 0.644723 | 4.3:-80978354 | MS.gene037585:CDS |
GATGGCTTGTCTTCATGGGG+TGG | 0.647236 | 4.3:-80976020 | MS.gene037585:CDS |
ATCAACAACAAATCTTGGTG+AGG | 0.650143 | 4.3:-80976787 | MS.gene037585:CDS |
GCAATCATTTAACTGCCAAG+AGG | 0.652505 | 4.3:-80978198 | MS.gene037585:CDS |
CTCGAAGAGCATGACAACAA+AGG | 0.653528 | 4.3:+80977087 | None:intergenic |
ATAACGAAAATGGAGAACAC+GGG | 0.654047 | 4.3:-80976280 | MS.gene037585:CDS |
AGGCAGGCCTAAGAGTTGTG+TGG | 0.658380 | 4.3:-80976670 | MS.gene037585:CDS |
TGGACTAAACAAGCTCGGAG+TGG | 0.667189 | 4.3:-80977011 | MS.gene037585:CDS |
TGAAATTGAAACTCAGCAGA+TGG | 0.678366 | 4.3:+80976164 | None:intergenic |
GAGTTTATGAGTCAACACAT+TGG | 0.684911 | 4.3:-80978259 | MS.gene037585:CDS |
TAACGAAAATGGAGAACACG+GGG | 0.724055 | 4.3:-80976279 | MS.gene037585:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTAAAGTGTTATTATTAA+AGG | + | chr4.3:80976305-80976324 | None:intergenic | 10.0% |
!!! | CAATGTTTTTAAATATTTTT+AGG | - | chr4.3:80976114-80976133 | MS.gene037585:intron | 10.0% |
!! | AATTATAAAATCTATATGCA+TGG | + | chr4.3:80976602-80976621 | None:intergenic | 15.0% |
!! | CTATAAGAAAAAAGAAAAAT+GGG | - | chr4.3:80977688-80977707 | MS.gene037585:intron | 15.0% |
!! | TCTATAAGAAAAAAGAAAAA+TGG | - | chr4.3:80977687-80977706 | MS.gene037585:intron | 15.0% |
!!! | AGATTTTATAATTTATATGC+TGG | - | chr4.3:80976609-80976628 | MS.gene037585:CDS | 15.0% |
!!! | TTTTGGATTATGTTTATTTT+GGG | - | chr4.3:80977210-80977229 | MS.gene037585:CDS | 15.0% |
!! | AAAAAATACAAAAGAAGCAA+AGG | - | chr4.3:80978595-80978614 | MS.gene037585:CDS | 20.0% |
!! | AAATTCTAACACATTATAAG+TGG | + | chr4.3:80977807-80977826 | None:intergenic | 20.0% |
!! | ATCTATTATAAACAAGCAAT+CGG | + | chr4.3:80976450-80976469 | None:intergenic | 20.0% |
!! | TAAACATTTAACATGAACAT+AGG | + | chr4.3:80976399-80976418 | None:intergenic | 20.0% |
!!! | AAGCAAATTTTTTTAATCAG+TGG | - | chr4.3:80979162-80979181 | MS.gene037585:intron | 20.0% |
!!! | AAGTTTGTTTGTTTTAAAGA+AGG | - | chr4.3:80976705-80976724 | MS.gene037585:CDS | 20.0% |
!!! | AATATGTAGTAAGTTTTTTC+AGG | - | chr4.3:80978047-80978066 | MS.gene037585:intron | 20.0% |
!!! | ATATGTAGTAAGTTTTTTCA+GGG | - | chr4.3:80978048-80978067 | MS.gene037585:intron | 20.0% |
!!! | ATTTTCTTATTCACAGTTAA+AGG | - | chr4.3:80976501-80976520 | MS.gene037585:intron | 20.0% |
!!! | CATTTATGATTTTGAATATG+AGG | - | chr4.3:80977592-80977611 | MS.gene037585:CDS | 20.0% |
!!! | GTTGTTTAAAACTTTTCTTA+AGG | - | chr4.3:80977376-80977395 | MS.gene037585:CDS | 20.0% |
!!! | GTTTTGGATTATGTTTATTT+TGG | - | chr4.3:80977209-80977228 | MS.gene037585:CDS | 20.0% |
!!! | TTTGGATTATGTTTATTTTG+GGG | - | chr4.3:80977211-80977230 | MS.gene037585:CDS | 20.0% |
!!! | TTTTCTTATTCACAGTTAAA+GGG | - | chr4.3:80976502-80976521 | MS.gene037585:intron | 20.0% |
! | AATGACATGAATAACGAAAA+TGG | - | chr4.3:80978950-80978969 | MS.gene037585:intron | 25.0% |
! | ATACTTAGAAATTGATCGAT+AGG | - | chr4.3:80976142-80976161 | MS.gene037585:intron | 25.0% |
! | CCAGTAAATATGAATTCTAA+TGG | - | chr4.3:80976064-80976083 | MS.gene037585:intron | 25.0% |
! | CCATTAGAATTCATATTTAC+TGG | + | chr4.3:80976067-80976086 | None:intergenic | 25.0% |
! | CTAGTTATAGTTGTTTATGT+TGG | - | chr4.3:80976219-80976238 | MS.gene037585:CDS | 25.0% |
! | GTAATTTATGCTTACTTCTA+GGG | + | chr4.3:80976878-80976897 | None:intergenic | 25.0% |
! | TAATTTATGCTTACTTCTAG+GGG | + | chr4.3:80976877-80976896 | None:intergenic | 25.0% |
! | TCTTGATATGTATGTGAAAA+TGG | + | chr4.3:80978788-80978807 | None:intergenic | 25.0% |
! | TTAGAATTCATATTTACTGG+AGG | + | chr4.3:80976064-80976083 | None:intergenic | 25.0% |
!! | AAAAATGGGCTTTAGTATAT+GGG | - | chr4.3:80977702-80977721 | MS.gene037585:intron | 25.0% |
!! | ATCAAATCACAAACATTTTC+TGG | - | chr4.3:80977171-80977190 | MS.gene037585:CDS | 25.0% |
!! | TCAAATCACAAACATTTTCT+GGG | - | chr4.3:80977172-80977191 | MS.gene037585:CDS | 25.0% |
!!! | ACATAGGTTTTTTTCTAGTT+TGG | + | chr4.3:80976383-80976402 | None:intergenic | 25.0% |
!!! | AGTTTTAGCAAGAAAATTGA+TGG | - | chr4.3:80978384-80978403 | MS.gene037585:CDS | 25.0% |
!!! | ATCAGTGGTATATTTTTTGT+TGG | - | chr4.3:80979177-80979196 | MS.gene037585:CDS | 25.0% |
!!! | GTTTTAAAGAAGGTTTTAAG+AGG | - | chr4.3:80976715-80976734 | MS.gene037585:CDS | 25.0% |
!!! | GTTTTAGCATTAGAAAAGAT+TGG | - | chr4.3:80976640-80976659 | MS.gene037585:CDS | 25.0% |
AAAAGAATCTGATCTCTGAA+AGG | + | chr4.3:80977552-80977571 | None:intergenic | 30.0% | |
AAATCTATATGCATGGTCTT+CGG | + | chr4.3:80976595-80976614 | None:intergenic | 30.0% | |
AATAACGAAAATGGAGAACA+CGG | - | chr4.3:80978959-80978978 | MS.gene037585:intron | 30.0% | |
ACACACTACAAGAAAACAAA+GGG | - | chr4.3:80976259-80976278 | MS.gene037585:CDS | 30.0% | |
ACTTTGATCTTCAGAGTTAA+AGG | + | chr4.3:80978095-80978114 | None:intergenic | 30.0% | |
AGCATAAATTACCATCACAA+AGG | - | chr4.3:80976886-80976905 | MS.gene037585:CDS | 30.0% | |
ATAAATTACCATCACAAAGG+AGG | - | chr4.3:80976889-80976908 | MS.gene037585:CDS | 30.0% | |
ATATCACACTTTCTCTATGA+TGG | + | chr4.3:80977310-80977329 | None:intergenic | 30.0% | |
ATCATCTGTTACTATCTCAT+TGG | + | chr4.3:80978491-80978510 | None:intergenic | 30.0% | |
ATGATATCCATATTCAATGC+AGG | + | chr4.3:80977908-80977927 | None:intergenic | 30.0% | |
ATGGGTATAAAAAAGAAGGA+TGG | - | chr4.3:80978532-80978551 | MS.gene037585:CDS | 30.0% | |
GAAGATATAATCCCATATGT+TGG | - | chr4.3:80976555-80976574 | MS.gene037585:intron | 30.0% | |
GATAAATGACATGCGTTATA+AGG | - | chr4.3:80977847-80977866 | MS.gene037585:intron | 30.0% | |
GGTAATTTATGCTTACTTCT+AGG | + | chr4.3:80976879-80976898 | None:intergenic | 30.0% | |
TAAATTACCATCACAAAGGA+GGG | - | chr4.3:80976890-80976909 | MS.gene037585:CDS | 30.0% | |
TACACATCAACAACAAATCT+TGG | - | chr4.3:80978448-80978467 | MS.gene037585:CDS | 30.0% | |
TGATCTGTGAAAATTGTCTT+CGG | + | chr4.3:80977419-80977438 | None:intergenic | 30.0% | |
TGATGGTTGAATCCAATAAA+AGG | + | chr4.3:80977293-80977312 | None:intergenic | 30.0% | |
TTATGTAGTACCTGCATAAT+TGG | + | chr4.3:80978667-80978686 | None:intergenic | 30.0% | |
TTGAGTGCTTAAAATACCAA+AGG | + | chr4.3:80979109-80979128 | None:intergenic | 30.0% | |
! | AAAAGTACATATTGAAGAGG+TGG | - | chr4.3:80978209-80978228 | MS.gene037585:CDS | 30.0% |
! | ACCTCTTCAATATGTACTTT+TGG | + | chr4.3:80978210-80978229 | None:intergenic | 30.0% |
! | CATAGAGAAAGTGTGATATT+TGG | - | chr4.3:80977311-80977330 | MS.gene037585:CDS | 30.0% |
! | CCTCTTCAATATGTACTTTT+GGG | + | chr4.3:80978209-80978228 | None:intergenic | 30.0% |
! | CTCTTCAATATGTACTTTTG+GGG | + | chr4.3:80978208-80978227 | None:intergenic | 30.0% |
! | GAAAAATGGGCTTTAGTATA+TGG | - | chr4.3:80977701-80977720 | MS.gene037585:intron | 30.0% |
! | GATCTTGCATCCATTTATTT+TGG | + | chr4.3:80977667-80977686 | None:intergenic | 30.0% |
! | TAGGAATTTAGCTTACATGA+TGG | - | chr4.3:80979202-80979221 | MS.gene037585:CDS | 30.0% |
!! | AATTTATATGCTGGCTTTGT+TGG | - | chr4.3:80976618-80976637 | MS.gene037585:CDS | 30.0% |
!!! | ATCCTTCTTTTTTATACCCA+TGG | + | chr4.3:80978533-80978552 | None:intergenic | 30.0% |
!!! | GGTATATTTTTTGTTGGTGT+AGG | - | chr4.3:80979183-80979202 | MS.gene037585:CDS | 30.0% |
!!! | TGTCGACTTTTTCAATTCAT+TGG | - | chr4.3:80978127-80978146 | MS.gene037585:intron | 30.0% |
AAATTGCAGCATCATTTGAG+TGG | - | chr4.3:80977354-80977373 | MS.gene037585:CDS | 35.0% | |
ACGACCTTCACCAAAATAAA+TGG | - | chr4.3:80977654-80977673 | MS.gene037585:intron | 35.0% | |
AGAAATTGATCGATAGGAGT+TGG | - | chr4.3:80976148-80976167 | MS.gene037585:intron | 35.0% | |
AGAAGATCCAAAGATAGTTG+TGG | - | chr4.3:80978285-80978304 | MS.gene037585:CDS | 35.0% | |
AGCAATGTCAATGAACCATT+AGG | - | chr4.3:80976025-80976044 | MS.gene037585:CDS | 35.0% | |
AGCCATGGGTATAAAAAAGA+AGG | - | chr4.3:80978528-80978547 | MS.gene037585:CDS | 35.0% | |
AGCTAGTATTAGTACATCAC+AGG | - | chr4.3:80978817-80978836 | MS.gene037585:intron | 35.0% | |
AGTATTAGTACATCACAGGT+TGG | - | chr4.3:80978821-80978840 | MS.gene037585:intron | 35.0% | |
ATAACGAAAATGGAGAACAC+GGG | - | chr4.3:80978960-80978979 | MS.gene037585:intron | 35.0% | |
ATCAACAACAAATCTTGGTG+AGG | - | chr4.3:80978453-80978472 | MS.gene037585:CDS | 35.0% | |
ATCATATCCCCTTCAAATGT+AGG | - | chr4.3:80978925-80978944 | MS.gene037585:intron | 35.0% | |
CAATTAAGTGAGAGCTTCAA+TGG | - | chr4.3:80977758-80977777 | MS.gene037585:intron | 35.0% | |
CACACACTACAAGAAAACAA+AGG | - | chr4.3:80976258-80976277 | MS.gene037585:CDS | 35.0% | |
CATATCATCGTTTATGCTTG+TGG | - | chr4.3:80977489-80977508 | MS.gene037585:CDS | 35.0% | |
CGAACTAGAGAAAAGATAAC+TGG | + | chr4.3:80977962-80977981 | None:intergenic | 35.0% | |
CGATGATATGTTTCACTTTC+AGG | + | chr4.3:80977479-80977498 | None:intergenic | 35.0% | |
GAGTTTATGAGTCAACACAT+TGG | - | chr4.3:80976981-80977000 | MS.gene037585:CDS | 35.0% | |
GATGGTAAATCACGCATAAA+AGG | - | chr4.3:80978550-80978569 | MS.gene037585:CDS | 35.0% | |
GCAATGTCAATGAACCATTA+GGG | - | chr4.3:80976026-80976045 | MS.gene037585:CDS | 35.0% | |
GCTTAAAATACCAAAGGACT+TGG | + | chr4.3:80979103-80979122 | None:intergenic | 35.0% | |
GTCGTAGATTCTTATTAGTG+CGG | + | chr4.3:80977262-80977281 | None:intergenic | 35.0% | |
TAGCACATGTTGTCATTAGT+CGG | - | chr4.3:80976790-80976809 | MS.gene037585:CDS | 35.0% | |
TATAATCCCATATGTTGGCA+TGG | - | chr4.3:80976560-80976579 | MS.gene037585:intron | 35.0% | |
TCAATTTCAACCAAGTCCTT+TGG | - | chr4.3:80979090-80979109 | MS.gene037585:intron | 35.0% | |
TGAAATTGAAACTCAGCAGA+TGG | + | chr4.3:80979079-80979098 | None:intergenic | 35.0% | |
TTATGAGTCAACACATTGGA+GGG | - | chr4.3:80976985-80977004 | MS.gene037585:CDS | 35.0% | |
TTTATGAGTCAACACATTGG+AGG | - | chr4.3:80976984-80977003 | MS.gene037585:CDS | 35.0% | |
! | ACTTTTCTTAAGGCAATGTG+TGG | - | chr4.3:80977386-80977405 | MS.gene037585:CDS | 35.0% |
! | CCCAAAAGTACATATTGAAG+AGG | - | chr4.3:80978206-80978225 | MS.gene037585:CDS | 35.0% |
! | CGACTATTTGCTCCTTTTAT+TGG | - | chr4.3:80977278-80977297 | MS.gene037585:CDS | 35.0% |
! | GAGATCAGATTCTTTTGCTA+TGG | - | chr4.3:80977556-80977575 | MS.gene037585:CDS | 35.0% |
! | GTCATTAGCCTACATTTGAA+GGG | + | chr4.3:80978936-80978955 | None:intergenic | 35.0% |
! | TCATTAGCCTACATTTGAAG+GGG | + | chr4.3:80978935-80978954 | None:intergenic | 35.0% |
! | TGTCATTAGCCTACATTTGA+AGG | + | chr4.3:80978937-80978956 | None:intergenic | 35.0% |
! | TTTTTCTCCACACAACTCTT+AGG | + | chr4.3:80978580-80978599 | None:intergenic | 35.0% |
!! | GTTATCTTTTCTCTAGTTCG+TGG | - | chr4.3:80977962-80977981 | MS.gene037585:intron | 35.0% |
!! | TGATGAAAAAGTGTCTCGTA+AGG | - | chr4.3:80976749-80976768 | MS.gene037585:CDS | 35.0% |
!!! | GCATCCATTTATTTTGGTGA+AGG | + | chr4.3:80977661-80977680 | None:intergenic | 35.0% |
!!! | TAAGTTTTTTCAGGGACATG+AGG | - | chr4.3:80978056-80978075 | MS.gene037585:intron | 35.0% |
AACCATCATGCCAATTATGC+AGG | - | chr4.3:80978654-80978673 | MS.gene037585:CDS | 40.0% | |
ACCACTGTATCAAAAGCCAT+GGG | - | chr4.3:80978514-80978533 | MS.gene037585:CDS | 40.0% | |
AGCACATGTTGTCATTAGTC+GGG | - | chr4.3:80976791-80976810 | MS.gene037585:CDS | 40.0% | |
AGGATGAAGGAAATGAAGGA+AGG | - | chr4.3:80977062-80977081 | MS.gene037585:CDS | 40.0% | |
CAAACTCCATGCCAACATAT+GGG | + | chr4.3:80976569-80976588 | None:intergenic | 40.0% | |
CAAGAGGATGAAGGAAATGA+AGG | - | chr4.3:80977058-80977077 | MS.gene037585:CDS | 40.0% | |
CATGGCAAAAGCAATTTCAG+AGG | - | chr4.3:80977448-80977467 | MS.gene037585:CDS | 40.0% | |
CATTCTACCGATGCTTATCA+TGG | - | chr4.3:80978995-80979014 | MS.gene037585:intron | 40.0% | |
CGATTTGCCACAACTATCTT+TGG | + | chr4.3:80978295-80978314 | None:intergenic | 40.0% | |
CTCTTGTCCATGATAAGCAT+CGG | + | chr4.3:80979005-80979024 | None:intergenic | 40.0% | |
CTTCATTTCCTTCATCCTCT+TGG | + | chr4.3:80977060-80977079 | None:intergenic | 40.0% | |
GAAGATGCCTGCATTGAATA+TGG | - | chr4.3:80977898-80977917 | MS.gene037585:intron | 40.0% | |
GCAATCATTTAACTGCCAAG+AGG | - | chr4.3:80977042-80977061 | MS.gene037585:CDS | 40.0% | |
GTAAATCACGCATAAAAGGC+AGG | - | chr4.3:80978554-80978573 | MS.gene037585:CDS | 40.0% | |
GTAGAAATGGCAAATCGATC+TGG | - | chr4.3:80976936-80976955 | MS.gene037585:CDS | 40.0% | |
TAACGAAAATGGAGAACACG+GGG | - | chr4.3:80978961-80978980 | MS.gene037585:intron | 40.0% | |
TACCACTGTATCAAAAGCCA+TGG | - | chr4.3:80978513-80978532 | MS.gene037585:CDS | 40.0% | |
TACCTGCATAATTGGCATGA+TGG | + | chr4.3:80978659-80978678 | None:intergenic | 40.0% | |
TATTCAATGCAGGCATCTTC+TGG | + | chr4.3:80977898-80977917 | None:intergenic | 40.0% | |
TCAAACTCCATGCCAACATA+TGG | + | chr4.3:80976570-80976589 | None:intergenic | 40.0% | |
TCTCGTAAGGATATCAGAAC+TGG | - | chr4.3:80976762-80976781 | MS.gene037585:CDS | 40.0% | |
TGCAGTAGGAATATCAAGCA+AGG | - | chr4.3:80978336-80978355 | MS.gene037585:CDS | 40.0% | |
TTTAACTGCCAAGAGGATGA+AGG | - | chr4.3:80977049-80977068 | MS.gene037585:CDS | 40.0% | |
TTTCTGGGCAGATGCTAAAA+TGG | - | chr4.3:80977187-80977206 | MS.gene037585:CDS | 40.0% | |
! | ACATGATGGCTTGTCTTCAT+GGG | - | chr4.3:80979216-80979235 | MS.gene037585:CDS | 40.0% |
! | GGCAGATGCTAAAATGGTTT+TGG | - | chr4.3:80977193-80977212 | MS.gene037585:CDS | 40.0% |
! | TACATGATGGCTTGTCTTCA+TGG | - | chr4.3:80979215-80979234 | MS.gene037585:CDS | 40.0% |
!!! | CTCTGAAATTGCTTTTGCCA+TGG | + | chr4.3:80977450-80977469 | None:intergenic | 40.0% |
AGGATGACTTTCTTGCAGCT+TGG | - | chr4.3:80977612-80977631 | MS.gene037585:CDS | 45.0% | |
CTCAACAAATGTAGAGCCTC+AGG | - | chr4.3:80979051-80979070 | MS.gene037585:intron | 45.0% | |
GGGATGCAAGCTCATGATTA+TGG | + | chr4.3:80976857-80976876 | None:intergenic | 45.0% | |
GTCAATGAACCATTAGGGAG+TGG | - | chr4.3:80976031-80976050 | MS.gene037585:CDS | 45.0% | |
GTCATTAGTCGGGAATCAAG+TGG | - | chr4.3:80976801-80976820 | MS.gene037585:CDS | 45.0% | |
GTTGGTCAGTAGGTTAGAGA+TGG | - | chr4.3:80976166-80976185 | MS.gene037585:CDS | 45.0% | |
TCAAGCAGCTGAGGTAGAAA+TGG | - | chr4.3:80976923-80976942 | MS.gene037585:CDS | 45.0% | |
! | ACCCATGGCTTTTGATACAG+TGG | + | chr4.3:80978518-80978537 | None:intergenic | 45.0% |
! | ATCGATAGGAGTTGGTCAGT+AGG | - | chr4.3:80976156-80976175 | MS.gene037585:CDS | 45.0% |
! | CATGATGGCTTGTCTTCATG+GGG | - | chr4.3:80979217-80979236 | MS.gene037585:CDS | 45.0% |
! | CTCGAAGAGCATGACAACAA+AGG | + | chr4.3:80978156-80978175 | None:intergenic | 45.0% |
!! | AGAGGTGGACTAAACAAGCT+CGG | - | chr4.3:80978224-80978243 | MS.gene037585:CDS | 45.0% |
!! | AAGAAAATATATAAATTTAA+TGG | + | chr4.3:80976489-80976508 | None:intergenic | 5.0% |
ATTGGAGGGAGGGAGAATGT+TGG | - | chr4.3:80976999-80977018 | MS.gene037585:CDS | 50.0% | |
CACAGATCAAGATGCTGCCA+TGG | - | chr4.3:80977430-80977449 | MS.gene037585:CDS | 50.0% | |
GAGTCAACACATTGGAGGGA+GGG | - | chr4.3:80976989-80977008 | MS.gene037585:CDS | 50.0% | |
GATCTATGTCGCACTGCAGT+AGG | - | chr4.3:80978322-80978341 | MS.gene037585:CDS | 50.0% | |
GCAGAAACCCTCCTTTGTGA+TGG | + | chr4.3:80976900-80976919 | None:intergenic | 50.0% | |
GGAGAACACGGGGAAGAATT+TGG | - | chr4.3:80978971-80978990 | MS.gene037585:intron | 50.0% | |
GGATGTGTGCTAGACGGTAA+GGG | - | chr4.3:80978250-80978269 | MS.gene037585:CDS | 50.0% | |
GGTTTATCGCCACTCCCTAA+TGG | + | chr4.3:80976043-80976062 | None:intergenic | 50.0% | |
GTCTTCATGGGGTGGAAACA+AGG | - | chr4.3:80979228-80979247 | MS.gene037585:CDS | 50.0% | |
TCAAGCAAGGCTGCTGAAGA+TGG | - | chr4.3:80978349-80978368 | MS.gene037585:CDS | 50.0% | |
TGAGTCAACACATTGGAGGG+AGG | - | chr4.3:80976988-80977007 | MS.gene037585:CDS | 50.0% | |
TGGACTAAACAAGCTCGGAG+TGG | - | chr4.3:80978229-80978248 | MS.gene037585:CDS | 50.0% | |
TGGATGTGTGCTAGACGGTA+AGG | - | chr4.3:80978249-80978268 | MS.gene037585:CDS | 50.0% | |
! | GGGCGAAACACATTTTCAGC+TGG | - | chr4.3:80977722-80977741 | MS.gene037585:intron | 50.0% |
AACTCAGCAGATGGTGCCTG+AGG | + | chr4.3:80979070-80979089 | None:intergenic | 55.0% | |
AGGCAGGCCTAAGAGTTGTG+TGG | - | chr4.3:80978570-80978589 | MS.gene037585:CDS | 55.0% | |
CGGAGTGGATGTGTGCTAGA+CGG | - | chr4.3:80978244-80978263 | MS.gene037585:CDS | 55.0% | |
TTCTGCTGCTCAAGCAGCTG+AGG | - | chr4.3:80976914-80976933 | MS.gene037585:CDS | 55.0% | |
! | GATGGCTTGTCTTCATGGGG+TGG | - | chr4.3:80979220-80979239 | MS.gene037585:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 80976001 | 80979261 | 80976001 | ID=MS.gene037585 |
chr4.3 | mRNA | 80976001 | 80979261 | 80976001 | ID=MS.gene037585.t1;Parent=MS.gene037585 |
chr4.3 | exon | 80979177 | 80979261 | 80979177 | ID=MS.gene037585.t1.exon1;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80979177 | 80979261 | 80979177 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
chr4.3 | exon | 80978179 | 80978745 | 80978179 | ID=MS.gene037585.t1.exon2;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80978179 | 80978745 | 80978179 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
chr4.3 | exon | 80976587 | 80977632 | 80976587 | ID=MS.gene037585.t1.exon3;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80976587 | 80977632 | 80976587 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
chr4.3 | exon | 80976424 | 80976483 | 80976424 | ID=MS.gene037585.t1.exon4;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80976424 | 80976483 | 80976424 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
chr4.3 | exon | 80976151 | 80976315 | 80976151 | ID=MS.gene037585.t1.exon5;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80976151 | 80976315 | 80976151 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
chr4.3 | exon | 80976001 | 80976057 | 80976001 | ID=MS.gene037585.t1.exon6;Parent=MS.gene037585.t1 |
chr4.3 | CDS | 80976001 | 80976057 | 80976001 | ID=cds.MS.gene037585.t1;Parent=MS.gene037585.t1 |
Gene Sequence |
Protein sequence |