Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037682.t1 | XP_024632639.1 | 95.7 | 694 | 30 | 0 | 1 | 694 | 1 | 694 | 0.00E+00 | 1350.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037682.t1 | Q9SZL8 | 31.3 | 636 | 428 | 7 | 3 | 632 | 69 | 701 | 1.5e-95 | 352.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037682.t1 | A0A2Z6MT37 | 66.5 | 693 | 127 | 1 | 1 | 693 | 1 | 588 | 1.3e-257 | 898.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene037682.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037682.t1 | MTR_5g039760 | 44.724 | 199 | 83 | 4 | 6 | 202 | 9 | 182 | 4.92e-47 | 165 |
MS.gene037682.t1 | MTR_0558s0020 | 34.601 | 263 | 140 | 6 | 11 | 247 | 40 | 296 | 9.81e-39 | 145 |
MS.gene037682.t1 | MTR_0402s0040 | 40.887 | 203 | 108 | 3 | 4 | 204 | 23 | 215 | 1.58e-38 | 150 |
MS.gene037682.t1 | MTR_7g074790 | 45.614 | 171 | 73 | 3 | 6 | 175 | 9 | 160 | 2.18e-38 | 142 |
MS.gene037682.t1 | MTR_6g051425 | 32.014 | 278 | 170 | 4 | 9 | 274 | 19 | 289 | 4.47e-38 | 145 |
MS.gene037682.t1 | MTR_6g090505 | 35.417 | 240 | 129 | 5 | 35 | 254 | 5 | 238 | 8.69e-34 | 133 |
MS.gene037682.t1 | MTR_8g446020 | 38.202 | 178 | 108 | 1 | 72 | 247 | 79 | 256 | 5.75e-33 | 128 |
MS.gene037682.t1 | MTR_7g061980 | 47.826 | 115 | 58 | 2 | 3 | 116 | 6 | 119 | 1.09e-28 | 111 |
MS.gene037682.t1 | MTR_5g015480 | 47.541 | 122 | 62 | 1 | 7 | 126 | 56 | 177 | 1.77e-27 | 112 |
MS.gene037682.t1 | MTR_4g102720 | 35.928 | 167 | 73 | 2 | 6 | 172 | 6 | 138 | 7.38e-27 | 109 |
MS.gene037682.t1 | MTR_1g083640 | 29.832 | 238 | 135 | 6 | 11 | 222 | 55 | 286 | 3.31e-25 | 106 |
MS.gene037682.t1 | MTR_7g446520 | 29.661 | 236 | 151 | 2 | 2 | 237 | 83 | 303 | 6.79e-25 | 106 |
MS.gene037682.t1 | MTR_1g070355 | 28.163 | 245 | 165 | 6 | 11 | 248 | 78 | 318 | 4.50e-24 | 107 |
MS.gene037682.t1 | MTR_5g076070 | 27.273 | 231 | 159 | 5 | 10 | 235 | 56 | 282 | 2.68e-21 | 95.1 |
MS.gene037682.t1 | MTR_7g446510 | 30.636 | 173 | 120 | 0 | 83 | 255 | 157 | 329 | 4.65e-21 | 95.5 |
MS.gene037682.t1 | MTR_1g057920 | 44.086 | 93 | 50 | 1 | 4 | 94 | 31 | 123 | 5.03e-21 | 89.7 |
MS.gene037682.t1 | MTR_2g070590 | 42.991 | 107 | 59 | 1 | 4 | 108 | 14 | 120 | 3.35e-20 | 87.0 |
MS.gene037682.t1 | MTR_7g446480 | 30.636 | 173 | 120 | 0 | 83 | 255 | 142 | 314 | 4.12e-20 | 92.4 |
MS.gene037682.t1 | MTR_6g017200 | 44.898 | 98 | 52 | 1 | 4 | 99 | 55 | 152 | 1.13e-19 | 86.7 |
MS.gene037682.t1 | MTR_0337s0040 | 33.566 | 143 | 93 | 1 | 72 | 212 | 80 | 222 | 2.05e-19 | 88.2 |
MS.gene037682.t1 | MTR_7g113010 | 40.000 | 130 | 62 | 2 | 4 | 131 | 454 | 569 | 2.80e-19 | 92.4 |
MS.gene037682.t1 | MTR_2g099430 | 48.235 | 85 | 44 | 0 | 32 | 116 | 28 | 112 | 1.37e-17 | 79.7 |
MS.gene037682.t1 | MTR_4g035820 | 24.000 | 325 | 224 | 9 | 4 | 316 | 72 | 385 | 4.52e-17 | 85.9 |
MS.gene037682.t1 | MTR_1g086270 | 33.333 | 105 | 63 | 2 | 301 | 398 | 1 | 105 | 7.05e-15 | 71.6 |
MS.gene037682.t1 | MTR_6g022070 | 26.590 | 173 | 120 | 3 | 301 | 472 | 1 | 167 | 1.67e-14 | 75.9 |
MS.gene037682.t1 | MTR_2g014100 | 27.778 | 198 | 123 | 4 | 11 | 188 | 48 | 245 | 1.95e-14 | 74.3 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 55 | 156 | 2.73e-14 | 73.6 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 55 | 156 | 2.79e-14 | 73.6 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 73 | 174 | 5.20e-14 | 72.8 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 75 | 176 | 5.67e-14 | 72.8 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 75 | 176 | 5.69e-14 | 72.8 |
MS.gene037682.t1 | MTR_4g067290 | 38.835 | 103 | 61 | 2 | 6 | 107 | 115 | 216 | 9.33e-14 | 73.2 |
MS.gene037682.t1 | MTR_1g013060 | 26.570 | 207 | 143 | 5 | 6 | 205 | 23 | 227 | 2.44e-13 | 70.5 |
MS.gene037682.t1 | MTR_6g022080 | 28.758 | 153 | 104 | 3 | 18 | 166 | 96 | 247 | 2.68e-13 | 70.9 |
MS.gene037682.t1 | MTR_2g098920 | 36.893 | 103 | 63 | 2 | 6 | 107 | 79 | 180 | 4.97e-12 | 67.4 |
MS.gene037682.t1 | MTR_2g098880 | 37.143 | 105 | 63 | 2 | 6 | 107 | 60 | 164 | 5.05e-12 | 67.0 |
MS.gene037682.t1 | MTR_1g055240 | 33.043 | 115 | 75 | 1 | 72 | 184 | 30 | 144 | 5.07e-12 | 64.7 |
MS.gene037682.t1 | MTR_2g098880 | 37.143 | 105 | 63 | 2 | 6 | 107 | 72 | 176 | 5.61e-12 | 67.0 |
MS.gene037682.t1 | MTR_7g028855 | 34.328 | 134 | 83 | 3 | 2 | 131 | 115 | 247 | 1.98e-11 | 67.4 |
MS.gene037682.t1 | MTR_3g006370 | 37.500 | 104 | 63 | 2 | 6 | 107 | 49 | 152 | 2.88e-11 | 64.3 |
MS.gene037682.t1 | MTR_1g008290 | 25.899 | 139 | 100 | 2 | 65 | 203 | 9 | 144 | 4.36e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037682.t1 | AT4G38180 | 31.289 | 636 | 428 | 7 | 3 | 632 | 69 | 701 | 1.79e-108 | 347 |
MS.gene037682.t1 | AT4G15090 | 28.613 | 685 | 472 | 8 | 3 | 679 | 47 | 722 | 1.24e-97 | 319 |
MS.gene037682.t1 | AT4G15090 | 28.613 | 685 | 472 | 8 | 3 | 679 | 47 | 722 | 1.24e-97 | 319 |
MS.gene037682.t1 | AT4G15090 | 28.613 | 685 | 472 | 8 | 3 | 679 | 47 | 722 | 1.24e-97 | 319 |
MS.gene037682.t1 | AT4G15090 | 28.613 | 685 | 472 | 8 | 3 | 679 | 47 | 722 | 1.24e-97 | 319 |
MS.gene037682.t1 | AT4G15090 | 28.613 | 685 | 472 | 8 | 3 | 679 | 47 | 722 | 1.24e-97 | 319 |
MS.gene037682.t1 | AT3G22170 | 29.327 | 624 | 389 | 9 | 2 | 607 | 65 | 654 | 3.31e-87 | 291 |
MS.gene037682.t1 | AT3G22170 | 29.327 | 624 | 389 | 9 | 2 | 607 | 65 | 654 | 3.31e-87 | 291 |
MS.gene037682.t1 | AT1G76320 | 29.382 | 599 | 403 | 9 | 11 | 607 | 1 | 581 | 9.27e-80 | 268 |
MS.gene037682.t1 | AT1G76320 | 29.382 | 599 | 403 | 9 | 11 | 607 | 1 | 581 | 3.09e-79 | 268 |
MS.gene037682.t1 | AT1G76320 | 29.382 | 599 | 403 | 9 | 11 | 607 | 1 | 581 | 3.09e-79 | 268 |
MS.gene037682.t1 | AT1G76320 | 29.382 | 599 | 403 | 9 | 11 | 607 | 1 | 581 | 3.20e-79 | 268 |
MS.gene037682.t1 | AT2G27110 | 28.368 | 631 | 411 | 12 | 5 | 630 | 47 | 641 | 2.07e-74 | 257 |
MS.gene037682.t1 | AT2G27110 | 28.368 | 631 | 411 | 12 | 5 | 630 | 47 | 641 | 2.07e-74 | 257 |
MS.gene037682.t1 | AT3G06250 | 27.520 | 625 | 392 | 14 | 6 | 621 | 189 | 761 | 7.79e-74 | 254 |
MS.gene037682.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 1.16e-13 | 75.1 |
MS.gene037682.t1 | AT3G06250 | 27.520 | 625 | 392 | 14 | 6 | 621 | 189 | 761 | 7.79e-74 | 254 |
MS.gene037682.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 1.16e-13 | 75.1 |
MS.gene037682.t1 | AT3G06250 | 27.520 | 625 | 392 | 14 | 6 | 621 | 189 | 761 | 7.79e-74 | 254 |
MS.gene037682.t1 | AT3G06250 | 37.864 | 103 | 50 | 2 | 6 | 107 | 27 | 116 | 1.16e-13 | 75.1 |
MS.gene037682.t1 | AT5G18960 | 26.282 | 624 | 404 | 14 | 6 | 621 | 210 | 785 | 5.74e-68 | 238 |
MS.gene037682.t1 | AT5G18960 | 37.864 | 103 | 50 | 2 | 6 | 107 | 42 | 131 | 3.21e-13 | 73.6 |
MS.gene037682.t1 | AT5G18960 | 26.282 | 624 | 404 | 14 | 6 | 621 | 210 | 785 | 5.74e-68 | 238 |
MS.gene037682.t1 | AT5G18960 | 37.864 | 103 | 50 | 2 | 6 | 107 | 42 | 131 | 3.21e-13 | 73.6 |
MS.gene037682.t1 | AT2G27110 | 28.599 | 514 | 344 | 7 | 119 | 630 | 4 | 496 | 2.84e-66 | 232 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 18 | 583 | 1.05e-64 | 228 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 18 | 583 | 1.05e-64 | 228 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 18 | 583 | 1.14e-64 | 228 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 32 | 597 | 1.33e-64 | 228 |
MS.gene037682.t1 | AT1G52520 | 26.889 | 569 | 387 | 10 | 7 | 563 | 85 | 636 | 1.64e-64 | 227 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 18 | 583 | 3.00e-64 | 228 |
MS.gene037682.t1 | AT4G19990 | 26.194 | 607 | 390 | 8 | 4 | 593 | 18 | 583 | 3.00e-64 | 228 |
MS.gene037682.t1 | AT2G32250 | 25.848 | 619 | 399 | 9 | 10 | 622 | 41 | 605 | 1.21e-62 | 223 |
MS.gene037682.t1 | AT4G38170 | 31.088 | 386 | 259 | 4 | 181 | 564 | 18 | 398 | 2.05e-62 | 218 |
MS.gene037682.t1 | AT2G32250 | 25.728 | 618 | 399 | 9 | 11 | 622 | 1 | 564 | 1.54e-61 | 220 |
MS.gene037682.t1 | AT2G32250 | 25.525 | 619 | 401 | 9 | 10 | 622 | 41 | 605 | 5.71e-60 | 216 |
MS.gene037682.t1 | AT2G32250 | 25.525 | 619 | 401 | 9 | 10 | 622 | 41 | 605 | 5.71e-60 | 216 |
MS.gene037682.t1 | AT2G32250 | 25.525 | 619 | 401 | 9 | 10 | 622 | 41 | 605 | 5.71e-60 | 216 |
MS.gene037682.t1 | AT2G32250 | 25.525 | 619 | 401 | 9 | 10 | 622 | 41 | 605 | 6.34e-60 | 216 |
MS.gene037682.t1 | AT2G32250 | 25.525 | 619 | 401 | 9 | 10 | 622 | 41 | 605 | 6.34e-60 | 216 |
MS.gene037682.t1 | AT4G19990 | 26.372 | 565 | 358 | 8 | 46 | 593 | 3 | 526 | 1.00e-59 | 214 |
MS.gene037682.t1 | AT2G32250 | 25.405 | 618 | 401 | 9 | 11 | 622 | 1 | 564 | 2.91e-59 | 213 |
MS.gene037682.t1 | AT1G80010 | 25.938 | 613 | 415 | 17 | 3 | 591 | 91 | 688 | 3.19e-57 | 207 |
MS.gene037682.t1 | AT1G10240 | 26.445 | 571 | 397 | 13 | 4 | 562 | 45 | 604 | 1.00e-53 | 196 |
MS.gene037682.t1 | AT1G10240 | 26.445 | 571 | 397 | 13 | 4 | 562 | 45 | 604 | 1.00e-53 | 196 |
MS.gene037682.t1 | AT5G28530 | 24.272 | 618 | 418 | 17 | 7 | 597 | 55 | 649 | 1.48e-46 | 176 |
MS.gene037682.t1 | AT5G28530 | 24.272 | 618 | 414 | 18 | 7 | 597 | 55 | 645 | 1.56e-45 | 173 |
MS.gene037682.t1 | AT5G28530 | 24.272 | 618 | 414 | 18 | 7 | 597 | 55 | 645 | 1.56e-45 | 173 |
MS.gene037682.t1 | AT5G28530 | 22.973 | 592 | 365 | 19 | 7 | 580 | 55 | 573 | 6.54e-30 | 125 |
MS.gene037682.t1 | AT5G28530 | 22.973 | 592 | 361 | 20 | 7 | 580 | 55 | 569 | 6.92e-29 | 122 |
MS.gene037682.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 65 | 170 | 3.70e-14 | 73.6 |
MS.gene037682.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 65 | 170 | 3.70e-14 | 73.6 |
MS.gene037682.t1 | AT3G59470 | 39.252 | 107 | 63 | 2 | 2 | 107 | 77 | 182 | 5.21e-14 | 73.2 |
MS.gene037682.t1 | AT3G07500 | 37.500 | 104 | 64 | 1 | 5 | 107 | 31 | 134 | 2.19e-12 | 67.4 |
MS.gene037682.t1 | AT2G43280 | 33.562 | 146 | 89 | 5 | 6 | 146 | 21 | 163 | 4.15e-12 | 66.2 |
Find 124 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAATCACAAACATATTT+TGG | 0.063768 | 4.3:+79002899 | MS.gene037682:CDS |
TAGATACGACTTGGCAATTT+TGG | 0.122360 | 4.3:+79002323 | MS.gene037682:CDS |
CGATGTGTACTAAACAATTT+AGG | 0.280754 | 4.3:-79004017 | None:intergenic |
TTTGCTAGCAGCTAAGAATA+AGG | 0.286355 | 4.3:-79003718 | None:intergenic |
TTTCGGTGATGTAGTTTCTT+TGG | 0.287406 | 4.3:+79002954 | MS.gene037682:CDS |
GAAAGACAAAAGATCCTCTT+TGG | 0.289157 | 4.3:+79002462 | MS.gene037682:CDS |
GGCTGATGCAAGAATGATAT+TGG | 0.289765 | 4.3:+79002921 | MS.gene037682:CDS |
TTGATCTATTTGATAACAAT+TGG | 0.292503 | 4.3:+79003376 | MS.gene037682:CDS |
CATTCTCTATTTCTCGTAAC+CGG | 0.307524 | 4.3:-79004157 | None:intergenic |
ATATTGGATTATGGATATTT+CGG | 0.311385 | 4.3:+79002937 | MS.gene037682:CDS |
ACATGGCATTTGATGCAAAA+TGG | 0.313268 | 4.3:+79003228 | MS.gene037682:CDS |
CTTTAGCCATTGCTTGGGCT+TGG | 0.339011 | 4.3:-79003164 | None:intergenic |
ATCGAAATGGCAGAGGAATC+TGG | 0.346573 | 4.3:+79002664 | MS.gene037682:CDS |
GCAAGAATGATATTGGATTA+TGG | 0.358291 | 4.3:+79002928 | MS.gene037682:CDS |
TGCGAAACCGAGTGTTGGTT+TGG | 0.367140 | 4.3:+79002288 | MS.gene037682:CDS |
GGTGTTATTATTGATCATAT+TGG | 0.368709 | 4.3:+79003975 | MS.gene037682:CDS |
AAAGGATTGTGCCTCTATAA+TGG | 0.369850 | 4.3:-79003035 | None:intergenic |
AGACGGAATGAAATTCTTAC+TGG | 0.375408 | 4.3:-79002520 | None:intergenic |
TATGGTAAGAAATGTGGTTT+TGG | 0.376185 | 4.3:+79002352 | MS.gene037682:CDS |
TCTACATAAGCTTGTAGAAA+AGG | 0.378913 | 4.3:+79004100 | MS.gene037682:CDS |
TTGAACAAACGAAAGGTAGA+TGG | 0.405470 | 4.3:+79002391 | MS.gene037682:CDS |
CTAGTGCTTTAGCCATTGCT+TGG | 0.405838 | 4.3:-79003170 | None:intergenic |
TCTCATACAAGCCTTAAAAC+TGG | 0.407408 | 4.3:-79003502 | None:intergenic |
TAGTGCTTTAGCCATTGCTT+GGG | 0.410561 | 4.3:-79003169 | None:intergenic |
ATAGTAGTGCAGCCCCAAAA+AGG | 0.420352 | 4.3:-79003053 | None:intergenic |
ATGCTCCACTATGATTAGAT+TGG | 0.422356 | 4.3:+79004052 | MS.gene037682:CDS |
ACCTAGGTTGCTTGATGAAA+GGG | 0.423781 | 4.3:+79003259 | MS.gene037682:CDS |
AGCATCACATCGTAAAATAT+CGG | 0.426527 | 4.3:+79002624 | MS.gene037682:CDS |
TATTGATCATATTGGAAATG+AGG | 0.429689 | 4.3:+79003983 | MS.gene037682:CDS |
CATAACCCATGTCGAGTCTC+TGG | 0.431181 | 4.3:-79003204 | None:intergenic |
TCAGGCTTTAACCATTATAG+AGG | 0.434996 | 4.3:+79003024 | MS.gene037682:CDS |
CTACATAAGCTTGTAGAAAA+GGG | 0.435662 | 4.3:+79004101 | MS.gene037682:CDS |
TGATCTATTTGATAACAATT+GGG | 0.442178 | 4.3:+79003377 | MS.gene037682:CDS |
CATGATATAGAGAAAGTTGT+TGG | 0.444784 | 4.3:-79003825 | None:intergenic |
TTTCAACCTACTGCCCTCCT+TGG | 0.458502 | 4.3:-79002443 | None:intergenic |
GACAACGTAGCATGGTGTAT+GGG | 0.459098 | 4.3:+79002791 | MS.gene037682:CDS |
CCTAGGGCTGATACGAGATC+AGG | 0.459959 | 4.3:+79002493 | MS.gene037682:CDS |
CATGGCATTTGATGCAAAAT+GGG | 0.461652 | 4.3:+79003229 | MS.gene037682:CDS |
TTTCTGTGTGTTGTAAAAGA+TGG | 0.462097 | 4.3:-79002588 | None:intergenic |
AGACAACGTAGCATGGTGTA+TGG | 0.465057 | 4.3:+79002790 | MS.gene037682:CDS |
AAGGGGTTTAAGATTAAGCC+TGG | 0.470153 | 4.3:+79004233 | MS.gene037682:CDS |
CGGCAGATTTGTTTGTTCCA+AGG | 0.478536 | 4.3:+79002426 | MS.gene037682:CDS |
GTGTTGTAAAAGATGGTTGT+GGG | 0.481849 | 4.3:-79002581 | None:intergenic |
ATTTCATTCCGTCTAAGAGA+TGG | 0.482262 | 4.3:+79002529 | MS.gene037682:CDS |
CAACAACTTTATCAAAGTGT+TGG | 0.488947 | 4.3:-79003551 | None:intergenic |
TTGGGCTTGGTCAGTGAACA+AGG | 0.489076 | 4.3:-79003151 | None:intergenic |
GAATGTTGATATCTTATCCT+TGG | 0.489846 | 4.3:-79003627 | None:intergenic |
TGGTCAGTGAACAAGGTTTG+AGG | 0.493511 | 4.3:-79003144 | None:intergenic |
GAATATGAGACACAAGCAAA+GGG | 0.493688 | 4.3:+79004215 | MS.gene037682:CDS |
ATCAATAATAACACCATCAC+AGG | 0.494625 | 4.3:-79003967 | None:intergenic |
AATTGGGTGAAATCAATGTA+TGG | 0.495445 | 4.3:+79003393 | MS.gene037682:CDS |
TGTGCGAGTTGCATTAGAAT+CGG | 0.498318 | 4.3:-79003651 | None:intergenic |
GTAGATGGCTTGATTACATC+CGG | 0.508373 | 4.3:+79002406 | MS.gene037682:CDS |
CTCTCCTTCCACTTCAAACA+TGG | 0.512512 | 4.3:-79003784 | None:intergenic |
ATGGTGATAACATATTCAAA+TGG | 0.513168 | 4.3:-79003765 | None:intergenic |
TGTTATCACCATGTTTGAAG+TGG | 0.514394 | 4.3:+79003776 | MS.gene037682:CDS |
CTCGACATGGGTTATGTACA+TGG | 0.515437 | 4.3:+79003211 | MS.gene037682:CDS |
CACCTAGGTTGCTTGATGAA+AGG | 0.515698 | 4.3:+79003258 | MS.gene037682:CDS |
ATGATGGATTGTCCAACATC+TGG | 0.516109 | 4.3:-79002846 | None:intergenic |
GTATGTAATACATGAGTTTG+AGG | 0.516337 | 4.3:+79002555 | MS.gene037682:CDS |
AAACCGCTGACTCATTCAAA+TGG | 0.528647 | 4.3:+79003082 | MS.gene037682:CDS |
TGATATGCGTGGTAAAATGA+TGG | 0.529588 | 4.3:-79002862 | None:intergenic |
AGGTGAAGTTTGAAGCAGCT+TGG | 0.529588 | 4.3:+79003334 | MS.gene037682:CDS |
ACACTTTGATAAAGTTGTTG+AGG | 0.530268 | 4.3:+79003554 | MS.gene037682:CDS |
TTTGTTCCAAGGAGGGCAGT+AGG | 0.531121 | 4.3:+79002437 | MS.gene037682:CDS |
TTTCATTCCGTCTAAGAGAT+GGG | 0.532627 | 4.3:+79002530 | MS.gene037682:CDS |
AGCATGGTGTATGGGGAAGT+TGG | 0.534278 | 4.3:+79002799 | MS.gene037682:CDS |
TTTGATCTTTGACGTGGTGT+AGG | 0.536468 | 4.3:-79004332 | None:intergenic |
CATACTTCCCATCTCTTAGA+CGG | 0.539409 | 4.3:-79002537 | None:intergenic |
TCAAGCTTATGAGATCGAAA+TGG | 0.540979 | 4.3:+79002651 | MS.gene037682:CDS |
CTTGGAACAAACAAATCTGC+CGG | 0.541110 | 4.3:-79002425 | None:intergenic |
ATCACCATGTTTGAAGTGGA+AGG | 0.544297 | 4.3:+79003780 | MS.gene037682:CDS |
AGCTGCCAATCTAATCATAG+TGG | 0.546809 | 4.3:-79004057 | None:intergenic |
ATTCTCTATTTCTCGTAACC+GGG | 0.548252 | 4.3:-79004156 | None:intergenic |
TGAAGCAGCTTGGAGCAAGT+TGG | 0.550033 | 4.3:+79003344 | MS.gene037682:CDS |
TTTGTATGACTTGTGTAAGC+TGG | 0.560502 | 4.3:+79004124 | MS.gene037682:CDS |
CCTGATCTCGTATCAGCCCT+AGG | 0.564208 | 4.3:-79002493 | None:intergenic |
AGATTTGTTTGTTCCAAGGA+GGG | 0.566275 | 4.3:+79002430 | MS.gene037682:CDS |
CCCCTTTCATCAAGCAACCT+AGG | 0.566470 | 4.3:-79003260 | None:intergenic |
TGTGTTGTAAAAGATGGTTG+TGG | 0.567063 | 4.3:-79002582 | None:intergenic |
ATGAACAAAGCTATCACACT+TGG | 0.569240 | 4.3:+79003444 | MS.gene037682:CDS |
GTTGAATATGGTAAGAAATG+TGG | 0.571393 | 4.3:+79002346 | MS.gene037682:CDS |
CAGATTTGTTTGTTCCAAGG+AGG | 0.577739 | 4.3:+79002429 | MS.gene037682:CDS |
TAATCTCGGATTTACACGAT+TGG | 0.578042 | 4.3:+79002741 | MS.gene037682:CDS |
TCATGCATTAAAAGTCATTG+AGG | 0.578104 | 4.3:+79003887 | MS.gene037682:CDS |
TTGATAGCGTAGATACGACT+TGG | 0.578993 | 4.3:+79002314 | MS.gene037682:CDS |
CACAGTCCATTTGATATGCG+TGG | 0.579117 | 4.3:-79002873 | None:intergenic |
AGCAAGAAGACAACGTAGCA+TGG | 0.582684 | 4.3:+79002783 | MS.gene037682:CDS |
TTTAAGGCTTGTATGAGACC+TGG | 0.585363 | 4.3:+79003507 | MS.gene037682:CDS |
CATGTATGAATACGATCAAG+AGG | 0.589868 | 4.3:+79003314 | MS.gene037682:CDS |
CAACTTATGAGCACACAGGC+AGG | 0.592345 | 4.3:+79002709 | MS.gene037682:CDS |
AAGCCTGAAAATAATGCAAG+TGG | 0.596112 | 4.3:-79003009 | None:intergenic |
TGACTTGTGTAAGCTGGTGA+TGG | 0.596476 | 4.3:+79004130 | MS.gene037682:CDS |
CACTGACCAAGCCCAAGCAA+TGG | 0.599270 | 4.3:+79003158 | MS.gene037682:CDS |
ACAACGTAGCATGGTGTATG+GGG | 0.603463 | 4.3:+79002792 | MS.gene037682:CDS |
TTATGAGATCGAAATGGCAG+AGG | 0.604319 | 4.3:+79002657 | MS.gene037682:CDS |
AGAATATGAGACACAAGCAA+AGG | 0.605489 | 4.3:+79004214 | MS.gene037682:CDS |
CTTAATGCGAAACCGAGTGT+TGG | 0.607268 | 4.3:+79002283 | MS.gene037682:CDS |
TGTTTGAAGTGGAAGGAGAG+TGG | 0.608268 | 4.3:+79003787 | MS.gene037682:CDS |
TACACCTTTGATCTTTGACG+TGG | 0.609768 | 4.3:-79004338 | None:intergenic |
ATAGAGAATGCTGATGATGA+AGG | 0.609789 | 4.3:+79004170 | MS.gene037682:CDS |
TAACCATTTGAATGAGTCAG+CGG | 0.612529 | 4.3:-79003085 | None:intergenic |
GAAACATTTCTTGAAGCACA+TGG | 0.613854 | 4.3:+79003111 | MS.gene037682:CDS |
AAGTGGTCGATTAGCACGGT+TGG | 0.614021 | 4.3:-79002992 | None:intergenic |
CCTAGGTTGCTTGATGAAAG+GGG | 0.618212 | 4.3:+79003260 | MS.gene037682:CDS |
GCAGGAGGTAGAGCTAATCT+CGG | 0.618607 | 4.3:+79002727 | MS.gene037682:CDS |
ATGCAAGTGGTCGATTAGCA+CGG | 0.619115 | 4.3:-79002996 | None:intergenic |
GTAAGCTGGTGATGGAGGCC+CGG | 0.626121 | 4.3:+79004138 | MS.gene037682:CDS |
TCAAATTCCAAACCAACACT+CGG | 0.627339 | 4.3:-79002295 | None:intergenic |
TACACCACGTCAAAGATCAA+AGG | 0.627890 | 4.3:+79004334 | MS.gene037682:CDS |
CTAGGGCTGATACGAGATCA+GGG | 0.628499 | 4.3:+79002494 | MS.gene037682:CDS |
CTTGTGTAAGCTGGTGATGG+AGG | 0.636254 | 4.3:+79004133 | MS.gene037682:CDS |
GTGATGCCAGAGACTCGACA+TGG | 0.645053 | 4.3:+79003198 | MS.gene037682:CDS |
AATTGAATAACACTGATACC+AGG | 0.649030 | 4.3:-79003525 | None:intergenic |
TGGACAAGAGATGCCTGTGA+TGG | 0.661541 | 4.3:+79003954 | MS.gene037682:CDS |
CAAAATGGGATCAAACACCT+AGG | 0.665706 | 4.3:+79003243 | MS.gene037682:CDS |
TGATTACTTGAACAAACGAA+AGG | 0.666107 | 4.3:+79002384 | MS.gene037682:CDS |
CTAGGTTGCTTGATGAAAGG+GGG | 0.671384 | 4.3:+79003261 | MS.gene037682:CDS |
ATTTCAACTTATGAGCACAC+AGG | 0.673642 | 4.3:+79002705 | MS.gene037682:CDS |
AATGGCTAAAGCACTAGTTG+AGG | 0.676750 | 4.3:+79003176 | MS.gene037682:CDS |
CTTATGAGCACACAGGCAGG+AGG | 0.695932 | 4.3:+79002712 | MS.gene037682:CDS |
AGTCTCGACATAAACTACCA+AGG | 0.709308 | 4.3:+79003610 | MS.gene037682:CDS |
TGATGCCAGAGACTCGACAT+GGG | 0.714570 | 4.3:+79003199 | MS.gene037682:CDS |
AATATGAGACACAAGCAAAG+GGG | 0.719571 | 4.3:+79004216 | MS.gene037682:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGGATTATGGATATTT+CGG | + | chr4.3:79002937-79002956 | MS.gene037682:CDS | 20.0% |
!! | ATCAATACATCTTAAAAAGA+TGG | + | chr4.3:79003934-79003953 | MS.gene037682:CDS | 20.0% |
!!! | AACAAATCACAAACATATTT+TGG | + | chr4.3:79002899-79002918 | MS.gene037682:CDS | 20.0% |
!!! | ACAAATCACAAACATATTTT+GGG | + | chr4.3:79002900-79002919 | MS.gene037682:CDS | 20.0% |
!!! | CTTTTTAAGATGTATTGATT+GGG | - | chr4.3:79003933-79003952 | None:intergenic | 20.0% |
!!! | TCTTTTTAAGATGTATTGAT+TGG | - | chr4.3:79003934-79003953 | None:intergenic | 20.0% |
!!! | TGATCTATTTGATAACAATT+GGG | + | chr4.3:79003377-79003396 | MS.gene037682:CDS | 20.0% |
!!! | TGTAAAAAATTTGAGACTTT+TGG | + | chr4.3:79003852-79003871 | MS.gene037682:CDS | 20.0% |
!!! | TTGATCTATTTGATAACAAT+TGG | + | chr4.3:79003376-79003395 | MS.gene037682:CDS | 20.0% |
!!! | TTTTTAAGATGTATTGATTG+GGG | - | chr4.3:79003932-79003951 | None:intergenic | 20.0% |
! | ATGGTGATAACATATTCAAA+TGG | - | chr4.3:79003768-79003787 | None:intergenic | 25.0% |
! | TATTGATCATATTGGAAATG+AGG | + | chr4.3:79003983-79004002 | MS.gene037682:CDS | 25.0% |
!! | CATATTCTTTTGTTACTGTT+GGG | - | chr4.3:79004202-79004221 | None:intergenic | 25.0% |
!! | GAGTTTAAATTCCAGTTTTA+AGG | + | chr4.3:79003491-79003510 | MS.gene037682:CDS | 25.0% |
!! | TCATATTCTTTTGTTACTGT+TGG | - | chr4.3:79004203-79004222 | None:intergenic | 25.0% |
!!! | GGTGTTATTATTGATCATAT+TGG | + | chr4.3:79003975-79003994 | MS.gene037682:CDS | 25.0% |
AATTGAATAACACTGATACC+AGG | - | chr4.3:79003528-79003547 | None:intergenic | 30.0% | |
AATTGGGTGAAATCAATGTA+TGG | + | chr4.3:79003393-79003412 | MS.gene037682:CDS | 30.0% | |
ACACTTTGATAAAGTTGTTG+AGG | + | chr4.3:79003554-79003573 | MS.gene037682:CDS | 30.0% | |
AGCATCACATCGTAAAATAT+CGG | + | chr4.3:79002624-79002643 | MS.gene037682:CDS | 30.0% | |
ATCAATAATAACACCATCAC+AGG | - | chr4.3:79003970-79003989 | None:intergenic | 30.0% | |
CAACAACTTTATCAAAGTGT+TGG | - | chr4.3:79003554-79003573 | None:intergenic | 30.0% | |
CATGATATAGAGAAAGTTGT+TGG | - | chr4.3:79003828-79003847 | None:intergenic | 30.0% | |
CGATGTGTACTAAACAATTT+AGG | - | chr4.3:79004020-79004039 | None:intergenic | 30.0% | |
CTACATAAGCTTGTAGAAAA+GGG | + | chr4.3:79004101-79004120 | MS.gene037682:CDS | 30.0% | |
GAATGTTGATATCTTATCCT+TGG | - | chr4.3:79003630-79003649 | None:intergenic | 30.0% | |
GCAAGAATGATATTGGATTA+TGG | + | chr4.3:79002928-79002947 | MS.gene037682:CDS | 30.0% | |
GTATGGTATCAAGCAAAAAT+GGG | + | chr4.3:79003410-79003429 | MS.gene037682:CDS | 30.0% | |
GTATGTAATACATGAGTTTG+AGG | + | chr4.3:79002555-79002574 | MS.gene037682:CDS | 30.0% | |
GTTGAATATGGTAAGAAATG+TGG | + | chr4.3:79002346-79002365 | MS.gene037682:CDS | 30.0% | |
TCATGCATTAAAAGTCATTG+AGG | + | chr4.3:79003887-79003906 | MS.gene037682:CDS | 30.0% | |
TCTACATAAGCTTGTAGAAA+AGG | + | chr4.3:79004100-79004119 | MS.gene037682:CDS | 30.0% | |
TGATTACTTGAACAAACGAA+AGG | + | chr4.3:79002384-79002403 | MS.gene037682:CDS | 30.0% | |
TGTATGGTATCAAGCAAAAA+TGG | + | chr4.3:79003409-79003428 | MS.gene037682:CDS | 30.0% | |
TTTCTGTGTGTTGTAAAAGA+TGG | - | chr4.3:79002591-79002610 | None:intergenic | 30.0% | |
! | ATTTTACCACGCATATCAAA+TGG | + | chr4.3:79002867-79002886 | MS.gene037682:CDS | 30.0% |
! | TATGGTAAGAAATGTGGTTT+TGG | + | chr4.3:79002352-79002371 | MS.gene037682:CDS | 30.0% |
AAAGGATTGTGCCTCTATAA+TGG | - | chr4.3:79003038-79003057 | None:intergenic | 35.0% | |
AAGCCTGAAAATAATGCAAG+TGG | - | chr4.3:79003012-79003031 | None:intergenic | 35.0% | |
AATATGAGACACAAGCAAAG+GGG | + | chr4.3:79004216-79004235 | MS.gene037682:CDS | 35.0% | |
ACATGGCATTTGATGCAAAA+TGG | + | chr4.3:79003228-79003247 | MS.gene037682:CDS | 35.0% | |
AGAATATGAGACACAAGCAA+AGG | + | chr4.3:79004214-79004233 | MS.gene037682:CDS | 35.0% | |
AGACGGAATGAAATTCTTAC+TGG | - | chr4.3:79002523-79002542 | None:intergenic | 35.0% | |
ATGAACAAAGCTATCACACT+TGG | + | chr4.3:79003444-79003463 | MS.gene037682:CDS | 35.0% | |
ATGCTCCACTATGATTAGAT+TGG | + | chr4.3:79004052-79004071 | MS.gene037682:CDS | 35.0% | |
ATTTCAACTTATGAGCACAC+AGG | + | chr4.3:79002705-79002724 | MS.gene037682:CDS | 35.0% | |
ATTTCATTCCGTCTAAGAGA+TGG | + | chr4.3:79002529-79002548 | MS.gene037682:CDS | 35.0% | |
CATGGCATTTGATGCAAAAT+GGG | + | chr4.3:79003229-79003248 | MS.gene037682:CDS | 35.0% | |
CATGTATGAATACGATCAAG+AGG | + | chr4.3:79003314-79003333 | MS.gene037682:CDS | 35.0% | |
CTCTTTGGTTAAAAAGCCTA+GGG | + | chr4.3:79002477-79002496 | MS.gene037682:CDS | 35.0% | |
GAAACATTTCTTGAAGCACA+TGG | + | chr4.3:79003111-79003130 | MS.gene037682:CDS | 35.0% | |
GAAAGACAAAAGATCCTCTT+TGG | + | chr4.3:79002462-79002481 | MS.gene037682:CDS | 35.0% | |
GAATATGAGACACAAGCAAA+GGG | + | chr4.3:79004215-79004234 | MS.gene037682:CDS | 35.0% | |
GTGTTGTAAAAGATGGTTGT+GGG | - | chr4.3:79002584-79002603 | None:intergenic | 35.0% | |
TAACCATTTGAATGAGTCAG+CGG | - | chr4.3:79003088-79003107 | None:intergenic | 35.0% | |
TAATCTCGGATTTACACGAT+TGG | + | chr4.3:79002741-79002760 | MS.gene037682:CDS | 35.0% | |
TCAAATTCCAAACCAACACT+CGG | - | chr4.3:79002298-79002317 | None:intergenic | 35.0% | |
TCAAGCTTATGAGATCGAAA+TGG | + | chr4.3:79002651-79002670 | MS.gene037682:CDS | 35.0% | |
TCTCATACAAGCCTTAAAAC+TGG | - | chr4.3:79003505-79003524 | None:intergenic | 35.0% | |
TGATATGCGTGGTAAAATGA+TGG | - | chr4.3:79002865-79002884 | None:intergenic | 35.0% | |
TGTGTTGTAAAAGATGGTTG+TGG | - | chr4.3:79002585-79002604 | None:intergenic | 35.0% | |
TGTTATCACCATGTTTGAAG+TGG | + | chr4.3:79003776-79003795 | MS.gene037682:CDS | 35.0% | |
TTGAACAAACGAAAGGTAGA+TGG | + | chr4.3:79002391-79002410 | MS.gene037682:CDS | 35.0% | |
TTTCATTCCGTCTAAGAGAT+GGG | + | chr4.3:79002530-79002549 | MS.gene037682:CDS | 35.0% | |
TTTCGGTGATGTAGTTTCTT+TGG | + | chr4.3:79002954-79002973 | MS.gene037682:CDS | 35.0% | |
TTTGCTAGCAGCTAAGAATA+AGG | - | chr4.3:79003721-79003740 | None:intergenic | 35.0% | |
! | AGATTTGTTTGTTCCAAGGA+GGG | + | chr4.3:79002430-79002449 | MS.gene037682:CDS | 35.0% |
! | ATAGAGAATGCTGATGATGA+AGG | + | chr4.3:79004170-79004189 | MS.gene037682:CDS | 35.0% |
! | ATTCTCTATTTCTCGTAACC+GGG | - | chr4.3:79004159-79004178 | None:intergenic | 35.0% |
! | CATTCTCTATTTCTCGTAAC+CGG | - | chr4.3:79004160-79004179 | None:intergenic | 35.0% |
! | GTATTTTCAACACCAGATGT+TGG | + | chr4.3:79002834-79002853 | MS.gene037682:CDS | 35.0% |
! | TCAGGCTTTAACCATTATAG+AGG | + | chr4.3:79003024-79003043 | MS.gene037682:CDS | 35.0% |
! | TTTGTATGACTTGTGTAAGC+TGG | + | chr4.3:79004124-79004143 | MS.gene037682:CDS | 35.0% |
!! | AGATACGACTTGGCAATTTT+GGG | + | chr4.3:79002324-79002343 | MS.gene037682:CDS | 35.0% |
!! | ATAGAGGCACAATCCTTTTT+GGG | + | chr4.3:79003040-79003059 | MS.gene037682:CDS | 35.0% |
!! | TAGATACGACTTGGCAATTT+TGG | + | chr4.3:79002323-79002342 | MS.gene037682:CDS | 35.0% |
!! | TATAGAGGCACAATCCTTTT+TGG | + | chr4.3:79003039-79003058 | MS.gene037682:CDS | 35.0% |
!!! | TGGCAATTTTGGGTTGAATA+TGG | + | chr4.3:79002334-79002353 | MS.gene037682:CDS | 35.0% |
ACCTAGGTTGCTTGATGAAA+GGG | + | chr4.3:79003259-79003278 | MS.gene037682:CDS | 40.0% | |
AGCTGCCAATCTAATCATAG+TGG | - | chr4.3:79004060-79004079 | None:intergenic | 40.0% | |
AGTCTCGACATAAACTACCA+AGG | + | chr4.3:79003610-79003629 | MS.gene037682:CDS | 40.0% | |
CAAAATGGGATCAAACACCT+AGG | + | chr4.3:79003243-79003262 | MS.gene037682:CDS | 40.0% | |
CATACTTCCCATCTCTTAGA+CGG | - | chr4.3:79002540-79002559 | None:intergenic | 40.0% | |
CCTCTTTGGTTAAAAAGCCT+AGG | + | chr4.3:79002476-79002495 | MS.gene037682:CDS | 40.0% | |
CTTGGAACAAACAAATCTGC+CGG | - | chr4.3:79002428-79002447 | None:intergenic | 40.0% | |
GGCTGATGCAAGAATGATAT+TGG | + | chr4.3:79002921-79002940 | MS.gene037682:CDS | 40.0% | |
GTAGATGGCTTGATTACATC+CGG | + | chr4.3:79002406-79002425 | MS.gene037682:CDS | 40.0% | |
TACACCACGTCAAAGATCAA+AGG | + | chr4.3:79004334-79004353 | MS.gene037682:CDS | 40.0% | |
TACACCTTTGATCTTTGACG+TGG | - | chr4.3:79004341-79004360 | None:intergenic | 40.0% | |
TAGTGCTTTAGCCATTGCTT+GGG | - | chr4.3:79003172-79003191 | None:intergenic | 40.0% | |
TGTGCGAGTTGCATTAGAAT+CGG | - | chr4.3:79003654-79003673 | None:intergenic | 40.0% | |
TTATGAGATCGAAATGGCAG+AGG | + | chr4.3:79002657-79002676 | MS.gene037682:CDS | 40.0% | |
TTTGATCTTTGACGTGGTGT+AGG | - | chr4.3:79004335-79004354 | None:intergenic | 40.0% | |
! | AAGGGGTTTAAGATTAAGCC+TGG | + | chr4.3:79004233-79004252 | MS.gene037682:CDS | 40.0% |
! | AATGGCTAAAGCACTAGTTG+AGG | + | chr4.3:79003176-79003195 | MS.gene037682:CDS | 40.0% |
! | ATCACCATGTTTGAAGTGGA+AGG | + | chr4.3:79003780-79003799 | MS.gene037682:CDS | 40.0% |
! | CAGATTTGTTTGTTCCAAGG+AGG | + | chr4.3:79002429-79002448 | MS.gene037682:CDS | 40.0% |
! | CCTAGGCTTTTTAACCAAAG+AGG | - | chr4.3:79002479-79002498 | None:intergenic | 40.0% |
! | CGACCACTTGCATTATTTTC+AGG | + | chr4.3:79003006-79003025 | MS.gene037682:CDS | 40.0% |
! | CGTCTACGATTTTGTAATCC+AGG | - | chr4.3:79004254-79004273 | None:intergenic | 40.0% |
! | TTTAAGGCTTGTATGAGACC+TGG | + | chr4.3:79003507-79003526 | MS.gene037682:CDS | 40.0% |
!! | AAACCGCTGACTCATTCAAA+TGG | + | chr4.3:79003082-79003101 | MS.gene037682:CDS | 40.0% |
!! | ATGATGGATTGTCCAACATC+TGG | - | chr4.3:79002849-79002868 | None:intergenic | 40.0% |
!! | TAGAGGCACAATCCTTTTTG+GGG | + | chr4.3:79003041-79003060 | MS.gene037682:CDS | 40.0% |
!! | TTGATAGCGTAGATACGACT+TGG | + | chr4.3:79002314-79002333 | MS.gene037682:CDS | 40.0% |
ACAACGTAGCATGGTGTATG+GGG | + | chr4.3:79002792-79002811 | MS.gene037682:CDS | 45.0% | |
AGACAACGTAGCATGGTGTA+TGG | + | chr4.3:79002790-79002809 | MS.gene037682:CDS | 45.0% | |
AGCAAGAAGACAACGTAGCA+TGG | + | chr4.3:79002783-79002802 | MS.gene037682:CDS | 45.0% | |
ATAGTAGTGCAGCCCCAAAA+AGG | - | chr4.3:79003056-79003075 | None:intergenic | 45.0% | |
ATCGAAATGGCAGAGGAATC+TGG | + | chr4.3:79002664-79002683 | MS.gene037682:CDS | 45.0% | |
ATGCAAGTGGTCGATTAGCA+CGG | - | chr4.3:79002999-79003018 | None:intergenic | 45.0% | |
CACAGTCCATTTGATATGCG+TGG | - | chr4.3:79002876-79002895 | None:intergenic | 45.0% | |
CACCTAGGTTGCTTGATGAA+AGG | + | chr4.3:79003258-79003277 | MS.gene037682:CDS | 45.0% | |
CCTAGGTTGCTTGATGAAAG+GGG | + | chr4.3:79003260-79003279 | MS.gene037682:CDS | 45.0% | |
CTAGGTTGCTTGATGAAAGG+GGG | + | chr4.3:79003261-79003280 | MS.gene037682:CDS | 45.0% | |
CTAGTGCTTTAGCCATTGCT+TGG | - | chr4.3:79003173-79003192 | None:intergenic | 45.0% | |
CTCTCCTTCCACTTCAAACA+TGG | - | chr4.3:79003787-79003806 | None:intergenic | 45.0% | |
CTTAATGCGAAACCGAGTGT+TGG | + | chr4.3:79002283-79002302 | MS.gene037682:CDS | 45.0% | |
GACAACGTAGCATGGTGTAT+GGG | + | chr4.3:79002791-79002810 | MS.gene037682:CDS | 45.0% | |
TGGTCAGTGAACAAGGTTTG+AGG | - | chr4.3:79003147-79003166 | None:intergenic | 45.0% | |
! | AGGTGAAGTTTGAAGCAGCT+TGG | + | chr4.3:79003334-79003353 | MS.gene037682:CDS | 45.0% |
! | CGGCAGATTTGTTTGTTCCA+AGG | + | chr4.3:79002426-79002445 | MS.gene037682:CDS | 45.0% |
! | CTCGACATGGGTTATGTACA+TGG | + | chr4.3:79003211-79003230 | MS.gene037682:CDS | 45.0% |
! | TGACTTGTGTAAGCTGGTGA+TGG | + | chr4.3:79004130-79004149 | MS.gene037682:CDS | 45.0% |
! | TGTTTGAAGTGGAAGGAGAG+TGG | + | chr4.3:79003787-79003806 | MS.gene037682:CDS | 45.0% |
AAGTGGTCGATTAGCACGGT+TGG | - | chr4.3:79002995-79003014 | None:intergenic | 50.0% | |
AGCATGGTGTATGGGGAAGT+TGG | + | chr4.3:79002799-79002818 | MS.gene037682:CDS | 50.0% | |
CAACTTATGAGCACACAGGC+AGG | + | chr4.3:79002709-79002728 | MS.gene037682:CDS | 50.0% | |
CATAACCCATGTCGAGTCTC+TGG | - | chr4.3:79003207-79003226 | None:intergenic | 50.0% | |
CCCCTTTCATCAAGCAACCT+AGG | - | chr4.3:79003263-79003282 | None:intergenic | 50.0% | |
CTAGGGCTGATACGAGATCA+GGG | + | chr4.3:79002494-79002513 | MS.gene037682:CDS | 50.0% | |
CTTTAGCCATTGCTTGGGCT+TGG | - | chr4.3:79003167-79003186 | None:intergenic | 50.0% | |
GCAGGAGGTAGAGCTAATCT+CGG | + | chr4.3:79002727-79002746 | MS.gene037682:CDS | 50.0% | |
TGAAGCAGCTTGGAGCAAGT+TGG | + | chr4.3:79003344-79003363 | MS.gene037682:CDS | 50.0% | |
TGATGCCAGAGACTCGACAT+GGG | + | chr4.3:79003199-79003218 | MS.gene037682:CDS | 50.0% | |
TGGACAAGAGATGCCTGTGA+TGG | + | chr4.3:79003954-79003973 | MS.gene037682:CDS | 50.0% | |
TTTCAACCTACTGCCCTCCT+TGG | - | chr4.3:79002446-79002465 | None:intergenic | 50.0% | |
TTTGTTCCAAGGAGGGCAGT+AGG | + | chr4.3:79002437-79002456 | MS.gene037682:CDS | 50.0% | |
! | TTGGGCTTGGTCAGTGAACA+AGG | - | chr4.3:79003154-79003173 | None:intergenic | 50.0% |
!! | CTTGTGTAAGCTGGTGATGG+AGG | + | chr4.3:79004133-79004152 | MS.gene037682:CDS | 50.0% |
!! | TGCGAAACCGAGTGTTGGTT+TGG | + | chr4.3:79002288-79002307 | MS.gene037682:CDS | 50.0% |
CACTGACCAAGCCCAAGCAA+TGG | + | chr4.3:79003158-79003177 | MS.gene037682:CDS | 55.0% | |
CCTAGGGCTGATACGAGATC+AGG | + | chr4.3:79002493-79002512 | MS.gene037682:CDS | 55.0% | |
CCTGATCTCGTATCAGCCCT+AGG | - | chr4.3:79002496-79002515 | None:intergenic | 55.0% | |
CTTATGAGCACACAGGCAGG+AGG | + | chr4.3:79002712-79002731 | MS.gene037682:CDS | 55.0% | |
GTGATGCCAGAGACTCGACA+TGG | + | chr4.3:79003198-79003217 | MS.gene037682:CDS | 55.0% | |
!! | GTAAGCTGGTGATGGAGGCC+CGG | + | chr4.3:79004138-79004157 | MS.gene037682:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 79002277 | 79004361 | 79002277 | ID=MS.gene037682 |
chr4.3 | mRNA | 79002277 | 79004361 | 79002277 | ID=MS.gene037682.t1;Parent=MS.gene037682 |
chr4.3 | exon | 79002277 | 79004361 | 79002277 | ID=MS.gene037682.t1.exon1;Parent=MS.gene037682.t1 |
chr4.3 | CDS | 79002277 | 79004361 | 79002277 | ID=cds.MS.gene037682.t1;Parent=MS.gene037682.t1 |
Gene Sequence |
Protein sequence |