Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037864.t1 | KEH17877.1 | 94.4 | 1013 | 50 | 4 | 1 | 1007 | 1 | 1012 | 0.00E+00 | 1900.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037864.t1 | O00311 | 23.3 | 544 | 314 | 13 | 507 | 979 | 58 | 569 | 3.7e-23 | 112.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037864.t1 | A0A072TKD6 | 94.4 | 1013 | 50 | 4 | 1 | 1007 | 1 | 1012 | 0.0e+00 | 1900.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037864.t1 | MTR_8g007150 | 94.291 | 1016 | 45 | 4 | 1 | 1007 | 1 | 1012 | 0.0 | 1922 |
| MS.gene037864.t1 | MTR_8g007150 | 81.752 | 1096 | 102 | 10 | 1 | 1007 | 1 | 1087 | 0.0 | 1729 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037864.t1 | AT4G16970 | 54.653 | 505 | 204 | 7 | 494 | 994 | 388 | 871 | 3.05e-180 | 547 |
Find 242 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTCAGATCTCAGTTTC+AGG | 0.190414 | 8.3:-80819193 | MS.gene037864:CDS |
| CGGAATATGCTTGAGCGTTT+TGG | 0.199917 | 8.3:-80822061 | MS.gene037864:CDS |
| AATACCTTAACGAAAATTTC+TGG | 0.203122 | 8.3:+80825108 | None:intergenic |
| CTCTTCACTGCCCCGCAATT+TGG | 0.205385 | 8.3:+80818995 | None:intergenic |
| AGGCTCTAACATCCAATAAA+AGG | 0.206842 | 8.3:-80820713 | MS.gene037864:CDS |
| AGTGAAACGGAGTTGAATTT+TGG | 0.214768 | 8.3:+80825307 | None:intergenic |
| ATGGATTGCTTTGACTCATT+TGG | 0.234727 | 8.3:-80823848 | MS.gene037864:CDS |
| CATTCATCTACGGTTGCTTT+GGG | 0.247411 | 8.3:-80820321 | MS.gene037864:CDS |
| ATTAAATCAAACAATGATTT+CGG | 0.255407 | 8.3:+80818091 | None:intergenic |
| TTAAATCAAACAATGATTTC+GGG | 0.265622 | 8.3:+80818092 | None:intergenic |
| AACATTATCAAATTTGTTAC+AGG | 0.266909 | 8.3:+80823250 | None:intergenic |
| TTTGAGTCTCGGATTGTAAA+TGG | 0.273704 | 8.3:-80824175 | MS.gene037864:CDS |
| ACATTCATCTACGGTTGCTT+TGG | 0.289832 | 8.3:-80820322 | MS.gene037864:CDS |
| AGAAGATCCGACAGATGTTT+TGG | 0.291136 | 8.3:-80823624 | MS.gene037864:CDS |
| TGGATTGCTTTGACTCATTT+GGG | 0.302207 | 8.3:-80823847 | MS.gene037864:CDS |
| CTTTCTTCCTTTGAAAGGTA+TGG | 0.302394 | 8.3:+80820485 | None:intergenic |
| AGAAGAGCCAACAAAAGTTT+TGG | 0.311700 | 8.3:-80823465 | MS.gene037864:CDS |
| AGCAAATTGACTTGCGTTTA+CGG | 0.311768 | 8.3:+80825283 | None:intergenic |
| CGAGAGAAAAGGAAGTTTCC+AGG | 0.319522 | 8.3:+80821395 | None:intergenic |
| TATTCCTTGGGTTTACTGTT+AGG | 0.322982 | 8.3:+80818059 | None:intergenic |
| TAAATTCGCAACAGCCTTAT+CGG | 0.327666 | 8.3:+80820599 | None:intergenic |
| GATATTTCTTTAGGTGGTTA+TGG | 0.330159 | 8.3:-80822639 | MS.gene037864:intron |
| GGGCATGCATGTATTAGATT+TGG | 0.331939 | 8.3:-80823432 | MS.gene037864:CDS |
| TTCCTCCAAGATTCTTGTCT+TGG | 0.332691 | 8.3:+80820739 | None:intergenic |
| GAGCTACTTTATTGTTAGAC+TGG | 0.342320 | 8.3:+80823153 | None:intergenic |
| CTTTGAAAGGTATGGGTTCT+CGG | 0.344019 | 8.3:+80820493 | None:intergenic |
| TAATTAACCAATCCTTCCTT+TGG | 0.344266 | 8.3:+80823704 | None:intergenic |
| GTCCTTCTTCTCAGAGGAAA+AGG | 0.345324 | 8.3:-80820404 | MS.gene037864:CDS |
| TGCGGGGCAGTGAAGAGCTT+TGG | 0.350904 | 8.3:-80818989 | MS.gene037864:CDS |
| AAAAGAAATTGCCAAATTGC+GGG | 0.357929 | 8.3:-80819006 | MS.gene037864:CDS |
| GCGAGTTGCGGTGGTGGTTC+CGG | 0.362514 | 8.3:+80825570 | None:intergenic |
| GAAGGTTTCAGAAGCTGCTT+TGG | 0.362927 | 8.3:+80823341 | None:intergenic |
| TAGAAATCCGTTACTGTTAA+CGG | 0.364241 | 8.3:+80825383 | None:intergenic |
| AATGATGATGTTGTTGGTAT+TGG | 0.365035 | 8.3:-80823884 | MS.gene037864:CDS |
| TCACCAATTGCAAGCCGTTT+CGG | 0.366080 | 8.3:+80825138 | None:intergenic |
| GATTCAATTGGAGAATGTTC+AGG | 0.367519 | 8.3:-80824124 | MS.gene037864:CDS |
| CATTACACAAAGATTGATCT+TGG | 0.372033 | 8.3:+80823903 | None:intergenic |
| TATTGGATCAGAGGACAAAA+TGG | 0.381016 | 8.3:-80823867 | MS.gene037864:CDS |
| CCTATACGTATTGATTCAAT+TGG | 0.381191 | 8.3:-80824136 | MS.gene037864:CDS |
| CAGAACCGAATTTAAAATAC+AGG | 0.382659 | 8.3:-80824096 | MS.gene037864:CDS |
| TTAACGGAGAGAGGAGAATC+AGG | 0.386785 | 8.3:+80825399 | None:intergenic |
| GCAAATTGACTTGCGTTTAC+GGG | 0.391662 | 8.3:+80825284 | None:intergenic |
| AGGGCCCTAAGGTTGATATT+TGG | 0.397053 | 8.3:-80819173 | MS.gene037864:CDS |
| CTCTACTATACATGCTGATT+GGG | 0.397374 | 8.3:-80819137 | MS.gene037864:CDS |
| CTTTGTGTGCAACTTGCACC+AGG | 0.400113 | 8.3:+80818138 | None:intergenic |
| TCAACACTAATCCTATTCCT+TGG | 0.401290 | 8.3:+80818046 | None:intergenic |
| TAACAGTAAACCCAAGGAAT+AGG | 0.401457 | 8.3:-80818057 | MS.gene037864:CDS |
| ATAGAGGAAGAAGAAGGTTC+AGG | 0.401686 | 8.3:-80822732 | MS.gene037864:intron |
| CAACACTAATCCTATTCCTT+GGG | 0.403336 | 8.3:+80818047 | None:intergenic |
| TAAAGAGGAAAGAGGTTTGA+AGG | 0.404692 | 8.3:-80823561 | MS.gene037864:CDS |
| GCGGGGCAGTGAAGAGCTTT+GGG | 0.404708 | 8.3:-80818988 | MS.gene037864:CDS |
| AGGATGCTTCAACGAGGTCT+TGG | 0.407582 | 8.3:-80817968 | MS.gene037864:CDS |
| CCAATTGAATCAATACGTAT+AGG | 0.408213 | 8.3:+80824136 | None:intergenic |
| AACTGTATTATAAAGTTTGA+AGG | 0.410114 | 8.3:-80821951 | MS.gene037864:CDS |
| AGTGACTCGGTTAGAATTTG+AGG | 0.413649 | 8.3:+80823275 | None:intergenic |
| TTTCTTCCTTTGAAAGGTAT+GGG | 0.416112 | 8.3:+80820486 | None:intergenic |
| ACTAATGAAGAAACTCTCAT+TGG | 0.417441 | 8.3:+80824009 | None:intergenic |
| AAAAGGGTTACTGCTCCTTC+AGG | 0.418092 | 8.3:-80820387 | MS.gene037864:CDS |
| TTCCTACGATCTGCCAGATC+TGG | 0.424122 | 8.3:+80820684 | None:intergenic |
| CAGTGAAGAGCTTTGGGAGG+TGG | 0.427916 | 8.3:-80818982 | MS.gene037864:CDS |
| GCAACGTAACGGACGAAATC+CGG | 0.428405 | 8.3:+80825429 | None:intergenic |
| GCTCCTTCAGGCAAGGTAGA+TGG | 0.430458 | 8.3:-80820375 | MS.gene037864:CDS |
| ACTCTACTATACATGCTGAT+TGG | 0.431671 | 8.3:-80819138 | MS.gene037864:CDS |
| GGATCTTCTCCGCATGCTAC+AGG | 0.436402 | 8.3:+80823638 | None:intergenic |
| GATCCGAAACGGCTTGCAAT+TGG | 0.437310 | 8.3:-80825141 | MS.gene037864:CDS |
| CCGCTTCTTCAACGCTTCGC+CGG | 0.437967 | 8.3:-80825448 | MS.gene037864:CDS |
| CCCTACTGTGGATGGTGAAA+AGG | 0.438053 | 8.3:-80823798 | MS.gene037864:CDS |
| AGACGGGAGAGGAATATTAC+TGG | 0.438464 | 8.3:+80820779 | None:intergenic |
| GAAACCTTCTCGCACATTGA+AGG | 0.438686 | 8.3:-80823327 | MS.gene037864:CDS |
| AGTAATATTCCTCTCCCGTC+TGG | 0.446156 | 8.3:-80820777 | MS.gene037864:CDS |
| TTCTCTCGAAAGCTAAAGAA+AGG | 0.446434 | 8.3:-80821380 | MS.gene037864:CDS |
| GAGGAGAGAGAGGAGGTGCC+AGG | 0.448642 | 8.3:+80825518 | None:intergenic |
| CGTCGACGGGATGACCGATC+TGG | 0.449155 | 8.3:+80825493 | None:intergenic |
| ATTATAAAAGATTCAAAAGA+TGG | 0.450944 | 8.3:+80822753 | None:intergenic |
| TTGTGTAATGATGATGTTGT+TGG | 0.453868 | 8.3:-80823890 | MS.gene037864:CDS |
| GCCGACCAAATATCAACCTT+AGG | 0.456009 | 8.3:+80819168 | None:intergenic |
| TATTCCGCTCATTATTTACA+TGG | 0.456851 | 8.3:+80822077 | None:intergenic |
| AAGGTTGATATTTGGTCGGC+TGG | 0.458152 | 8.3:-80819165 | MS.gene037864:CDS |
| GTGGTCCAAGACAAGAATCT+TGG | 0.458901 | 8.3:-80820744 | MS.gene037864:CDS |
| TTTGAAGGTTCTTTCAAAAG+TGG | 0.458914 | 8.3:-80821936 | MS.gene037864:CDS |
| GTGCAATGAAATTTGAGTCT+CGG | 0.462949 | 8.3:-80824186 | MS.gene037864:CDS |
| GATTGATCTTGGACACTAGT+TGG | 0.465730 | 8.3:+80823914 | None:intergenic |
| AACAAAGGGTTTCCGTGCCC+CGG | 0.466552 | 8.3:-80820153 | MS.gene037864:CDS |
| TAAAAGGGAATTGCCAGATC+TGG | 0.468469 | 8.3:-80820697 | MS.gene037864:CDS |
| GGCTCTTCTCCACATACTAC+AGG | 0.475497 | 8.3:+80823479 | None:intergenic |
| CTTAGTGCTAGTAACATCTC+TGG | 0.475547 | 8.3:+80820536 | None:intergenic |
| TCCAATTCCAAAACATCTGT+CGG | 0.478188 | 8.3:+80823617 | None:intergenic |
| AACATTATTGAAGGTGATGA+AGG | 0.478543 | 8.3:-80823197 | MS.gene037864:CDS |
| AATGATCAGAACATTATTGA+AGG | 0.479243 | 8.3:-80823206 | MS.gene037864:CDS |
| AAATTCGCAACAGCCTTATC+GGG | 0.479709 | 8.3:+80820600 | None:intergenic |
| TTGTTCAGATCTCAGTTTCA+GGG | 0.479868 | 8.3:-80819192 | MS.gene037864:CDS |
| GGCTCTAACATCCAATAAAA+GGG | 0.480027 | 8.3:-80820712 | MS.gene037864:CDS |
| GGTCCATGTGTTGGAACAAA+GGG | 0.481545 | 8.3:-80820167 | MS.gene037864:CDS |
| GCAACCGTAGATGAATGTAT+AGG | 0.482776 | 8.3:+80820327 | None:intergenic |
| CACTCCTCGAAGACCAATCC+TGG | 0.482873 | 8.3:-80825536 | MS.gene037864:CDS |
| AGATTCTTGTCTTGGACCAC+AGG | 0.483607 | 8.3:+80820747 | None:intergenic |
| AGCTCCTTTCTTCCTTTGAA+AGG | 0.484570 | 8.3:+80820480 | None:intergenic |
| CCGACCAAATATCAACCTTA+GGG | 0.486366 | 8.3:+80819169 | None:intergenic |
| CCACTGGAAAGGATGTTTCA+CGG | 0.486521 | 8.3:+80818946 | None:intergenic |
| ATTGGGAAAACTTCTTTCCC+TGG | 0.486809 | 8.3:-80819120 | MS.gene037864:CDS |
| ATCTCAGTTTCAGGGCCCTA+AGG | 0.486826 | 8.3:-80819184 | MS.gene037864:CDS |
| GAAAGATACTCCGCGTCGAC+GGG | 0.487994 | 8.3:+80825480 | None:intergenic |
| GGATCGGCGAGTTGCGGTGG+TGG | 0.491104 | 8.3:+80825564 | None:intergenic |
| TCTTTAGCTTTCGAGAGAAA+AGG | 0.491702 | 8.3:+80821384 | None:intergenic |
| GATGGAAGATGTTGCTCAAA+GGG | 0.492219 | 8.3:-80823666 | MS.gene037864:CDS |
| GAGAGAGGAGGTGCCAGGAT+TGG | 0.493624 | 8.3:+80825523 | None:intergenic |
| AAGAGGTCCAAAGGAAGGAT+TGG | 0.493708 | 8.3:-80823711 | MS.gene037864:CDS |
| CAAGAATCTTGGAGGAATCA+AGG | 0.494455 | 8.3:-80820733 | MS.gene037864:CDS |
| TTTATAATAGAGGAAGAAGA+AGG | 0.495240 | 8.3:-80822738 | MS.gene037864:CDS |
| TTACTGGATGCATCAAGCCT+TGG | 0.496091 | 8.3:+80820795 | None:intergenic |
| GAGGAAAGAGGTTTGAAGGA+AGG | 0.496387 | 8.3:-80823557 | MS.gene037864:CDS |
| AGCACAAGGAGCAGATGGCT+CGG | 0.498407 | 8.3:-80820571 | MS.gene037864:CDS |
| CTCTCTCTCCTCCTCCAGAT+CGG | 0.499013 | 8.3:-80825507 | MS.gene037864:CDS |
| ATATGTGAGCTTCAGTGGTA+TGG | 0.499209 | 8.3:-80821568 | MS.gene037864:CDS |
| AAACCTTCTCGCACATTGAA+GGG | 0.499606 | 8.3:-80823326 | MS.gene037864:CDS |
| AAGCTGCTTTCGCCATGGCT+AGG | 0.503048 | 8.3:-80825347 | MS.gene037864:CDS |
| GCACAAGGAGCAGATGGCTC+GGG | 0.506807 | 8.3:-80820570 | MS.gene037864:CDS |
| TAAAAGAAATTGCCAAATTG+CGG | 0.506980 | 8.3:-80819007 | MS.gene037864:CDS |
| CGTTGAAGCTGCTTTCGCCA+TGG | 0.511259 | 8.3:-80825352 | MS.gene037864:CDS |
| TTGCGTTTACGGGAGTGAAA+CGG | 0.511839 | 8.3:+80825294 | None:intergenic |
| CATACCTTTCAAAGGAAGAA+AGG | 0.513266 | 8.3:-80820484 | MS.gene037864:CDS |
| GGGACTTTATCAACAAACTC+TGG | 0.518146 | 8.3:+80818112 | None:intergenic |
| TCCTTCTTCTCAGAGGAAAA+GGG | 0.519310 | 8.3:-80820403 | MS.gene037864:CDS |
| TTAGTGTTGAAGATGTTCTC+AGG | 0.521851 | 8.3:-80818033 | MS.gene037864:CDS |
| ATGGTCAAAGGAGAGATATC+TGG | 0.525173 | 8.3:-80824046 | MS.gene037864:CDS |
| TATGTGAGCTTCAGTGGTAT+GGG | 0.526504 | 8.3:-80821567 | MS.gene037864:CDS |
| TGAAATTCGTAAGCATATGA+AGG | 0.528442 | 8.3:-80820655 | MS.gene037864:CDS |
| TATTGAAGGTGATGAAGGTA+AGG | 0.529301 | 8.3:-80823192 | MS.gene037864:CDS |
| GTTCACAGAGATGTTAAACC+TGG | 0.530796 | 8.3:-80821413 | MS.gene037864:CDS |
| AGCTACTTTATTGTTAGACT+GGG | 0.530901 | 8.3:+80823154 | None:intergenic |
| TGGTCTTCGAGGAGTGGAGT+TGG | 0.531805 | 8.3:+80825543 | None:intergenic |
| CATGGCGAAAGCAGCTTCAA+CGG | 0.534287 | 8.3:+80825353 | None:intergenic |
| AAACCCTTTGTTCCAACACA+TGG | 0.534397 | 8.3:+80820164 | None:intergenic |
| CATCAGTTGTTCTATGAGCA+CGG | 0.536001 | 8.3:+80822607 | None:intergenic |
| AGAAGAGAAAAGAGGTCCAA+AGG | 0.536493 | 8.3:-80823720 | MS.gene037864:CDS |
| CGTGCTCATAGAACAACTGA+TGG | 0.537080 | 8.3:-80822606 | MS.gene037864:CDS |
| TGGCAAGGTTGAAGTCGATA+AGG | 0.538478 | 8.3:+80821354 | None:intergenic |
| GAGAAAAGAGGTCCAAAGGA+AGG | 0.538859 | 8.3:-80823716 | MS.gene037864:CDS |
| ATAAATAAAGAAGAGAAAAG+AGG | 0.539398 | 8.3:-80823728 | MS.gene037864:CDS |
| TTGATATATGTGAGCTTCAG+TGG | 0.539584 | 8.3:-80821573 | MS.gene037864:CDS |
| TGTTTCACGGTCATGCAGCT+TGG | 0.540699 | 8.3:+80818959 | None:intergenic |
| AACATAACCCCTACTGTGGA+TGG | 0.541969 | 8.3:-80823806 | MS.gene037864:CDS |
| CCCTAAGGTTGATATTTGGT+CGG | 0.545440 | 8.3:-80819169 | MS.gene037864:CDS |
| ATGAAGGCAAAAGCGGATGC+TGG | 0.545882 | 8.3:-80820639 | MS.gene037864:CDS |
| CGATCTGGAGGAGGAGAGAG+AGG | 0.549243 | 8.3:+80825508 | None:intergenic |
| CCGGCGAAGCGTTGAAGAAG+CGG | 0.552425 | 8.3:+80825448 | None:intergenic |
| TTCGAGGAGTGGAGTTGGAT+CGG | 0.552545 | 8.3:+80825548 | None:intergenic |
| AAGCTGCTTTGGATTTGAAG+AGG | 0.554463 | 8.3:+80823352 | None:intergenic |
| GTAGATGAATGTATAGGCAT+TGG | 0.557803 | 8.3:+80820333 | None:intergenic |
| GGAAAGATACTCCGCGTCGA+CGG | 0.560979 | 8.3:+80825479 | None:intergenic |
| GGGTCCATGTGTTGGAACAA+AGG | 0.561472 | 8.3:-80820168 | MS.gene037864:CDS |
| CGTTGAAGAAGCGGCAACGA+AGG | 0.561497 | 8.3:+80825457 | None:intergenic |
| AGATGGAAGATGTTGCTCAA+AGG | 0.563134 | 8.3:-80823667 | MS.gene037864:CDS |
| AAGAATTTACCTCCGGGGCA+CGG | 0.563272 | 8.3:+80820141 | None:intergenic |
| GATTCTTGTCTTGGACCACA+GGG | 0.566206 | 8.3:+80820748 | None:intergenic |
| CCTCTCTCCGTTAACAGTAA+CGG | 0.568053 | 8.3:-80825390 | MS.gene037864:CDS |
| GGGGAAGAACCAGACGGGAG+AGG | 0.568805 | 8.3:+80820768 | None:intergenic |
| CGTAGAGCACAAGGAGCAGA+TGG | 0.571518 | 8.3:-80820576 | MS.gene037864:CDS |
| TATGGGTTCTCGGAGCCTAT+CGG | 0.573323 | 8.3:+80820503 | None:intergenic |
| CTAAGACTGCTTCTGCCGAT+AGG | 0.573679 | 8.3:-80820518 | MS.gene037864:CDS |
| TTATGAGAATGATAGAGAGA+TGG | 0.574463 | 8.3:-80823684 | MS.gene037864:CDS |
| CCGTTACTGTTAACGGAGAG+AGG | 0.575451 | 8.3:+80825390 | None:intergenic |
| AAAAGAGAGGGTCCATGTGT+TGG | 0.577815 | 8.3:-80820176 | MS.gene037864:CDS |
| GTCCAAGACAAGAATCTTGG+AGG | 0.578441 | 8.3:-80820741 | MS.gene037864:CDS |
| CGGGATGACCGATCTGGAGG+AGG | 0.579997 | 8.3:+80825499 | None:intergenic |
| AATGGAATTTACCACTGGAA+AGG | 0.581118 | 8.3:+80818935 | None:intergenic |
| TTGGGGTTATTAAGAAGCAA+AGG | 0.581215 | 8.3:-80820303 | MS.gene037864:intron |
| TTTGTTACAGGCTAGTGACT+CGG | 0.581585 | 8.3:+80823262 | None:intergenic |
| CTGCCATCTACCTTGCCTGA+AGG | 0.582954 | 8.3:+80820372 | None:intergenic |
| TATCGACTTCAACCTTGCCA+TGG | 0.583985 | 8.3:-80821351 | MS.gene037864:intron |
| CCGATCCAAAATGTCTCCGC+CGG | 0.584581 | 8.3:-80825589 | None:intergenic |
| AACCTTCTCGCACATTGAAG+GGG | 0.587830 | 8.3:-80823325 | MS.gene037864:CDS |
| CAGGATTGGTCTTCGAGGAG+TGG | 0.587880 | 8.3:+80825537 | None:intergenic |
| GTTGGATCGGCGAGTTGCGG+TGG | 0.588249 | 8.3:+80825561 | None:intergenic |
| CGAGGGTCTAGATAGATTCG+TGG | 0.588972 | 8.3:-80823966 | MS.gene037864:CDS |
| TGGTGGAGCAAGATTAGCAA+AGG | 0.589902 | 8.3:+80823934 | None:intergenic |
| TGTCATATGATTGCAAGTAT+CGG | 0.590214 | 8.3:+80818167 | None:intergenic |
| TGATCTTGGACACTAGTTGG+TGG | 0.590604 | 8.3:+80823917 | None:intergenic |
| GCGAAAGCAGCTTCAACGGA+AGG | 0.591262 | 8.3:+80825357 | None:intergenic |
| CGAGAACCCATACCTTTCAA+AGG | 0.593233 | 8.3:-80820492 | MS.gene037864:CDS |
| GCTAGTAACATCTCTGGCAG+AGG | 0.593503 | 8.3:+80820542 | None:intergenic |
| GGTGCCAGGATTGGTCTTCG+AGG | 0.593716 | 8.3:+80825532 | None:intergenic |
| CTTCAGGCAAGGTAGATGGC+AGG | 0.594037 | 8.3:-80820371 | MS.gene037864:CDS |
| CAGGTGGAAGAGATCCGAAA+CGG | 0.595991 | 8.3:-80825152 | MS.gene037864:CDS |
| GGTGGAGCAAGATTAGCAAA+GGG | 0.597178 | 8.3:+80823935 | None:intergenic |
| AATGCCTATACATTCATCTA+CGG | 0.599137 | 8.3:-80820331 | MS.gene037864:CDS |
| AGTCTCGGATTGTAAATGGT+GGG | 0.602244 | 8.3:-80824171 | MS.gene037864:CDS |
| TCAATTTGCTCAATCACTCA+AGG | 0.603232 | 8.3:-80825270 | MS.gene037864:intron |
| GTTGAAGAAGCGGCAACGAA+GGG | 0.603458 | 8.3:+80825458 | None:intergenic |
| CCACAGGGGAAGAACCAGAC+GGG | 0.606761 | 8.3:+80820763 | None:intergenic |
| ACCTTCTCGCACATTGAAGG+GGG | 0.609586 | 8.3:-80823324 | MS.gene037864:CDS |
| GGCATAACAAGCATGGTCAA+AGG | 0.610521 | 8.3:-80824058 | MS.gene037864:CDS |
| GAGTCTCGGATTGTAAATGG+TGG | 0.614229 | 8.3:-80824172 | MS.gene037864:CDS |
| TGCCAGATCTGGCAGATCGT+AGG | 0.614643 | 8.3:-80820686 | MS.gene037864:CDS |
| GCGAATTTACGTAGAGCACA+AGG | 0.616884 | 8.3:-80820585 | MS.gene037864:CDS |
| CCCGTCTGGTTCTTCCCCTG+TGG | 0.618731 | 8.3:-80820763 | MS.gene037864:CDS |
| GGGCAGTGAAGAGCTTTGGG+AGG | 0.619718 | 8.3:-80818985 | MS.gene037864:CDS |
| ATTCATCTACGGTTGCTTTG+GGG | 0.621492 | 8.3:-80820320 | MS.gene037864:CDS |
| AGTTGCGGTGGTGGTTCCGG+CGG | 0.621987 | 8.3:+80825573 | None:intergenic |
| AGGATGAATCCTGTAGTATG+TGG | 0.629143 | 8.3:-80823488 | MS.gene037864:CDS |
| TACAGGGAAGCTGATAATGA+CGG | 0.629467 | 8.3:-80824079 | MS.gene037864:CDS |
| TAAGCATATGAAGGCAAAAG+CGG | 0.635350 | 8.3:-80820646 | MS.gene037864:CDS |
| GGTTACTGCTCCTTCAGGCA+AGG | 0.636110 | 8.3:-80820382 | MS.gene037864:CDS |
| CGACGGGATGACCGATCTGG+AGG | 0.637015 | 8.3:+80825496 | None:intergenic |
| GGAGTTGGATCGGCGAGTTG+CGG | 0.637588 | 8.3:+80825558 | None:intergenic |
| TGAAAAGTCCTTCTTCTCAG+AGG | 0.638414 | 8.3:-80820410 | MS.gene037864:CDS |
| GACGGAAAACATAAAAGAGA+GGG | 0.640908 | 8.3:-80820188 | MS.gene037864:CDS |
| GAGGGTCTAGATAGATTCGT+GGG | 0.642595 | 8.3:-80823965 | MS.gene037864:CDS |
| ACTTGCGTGCTTGCACAAAG+AGG | 0.643572 | 8.3:-80821527 | MS.gene037864:intron |
| AAGTGACTCGAGGAAGCTCG+AGG | 0.646512 | 8.3:-80823984 | MS.gene037864:CDS |
| TGTTGTTGGTATTGGATCAG+AGG | 0.649031 | 8.3:-80823876 | MS.gene037864:CDS |
| TTTACTGTTCTGGTTCGCCA+GGG | 0.650022 | 8.3:+80819103 | None:intergenic |
| AAAGAAATTGCCAAATTGCG+GGG | 0.650726 | 8.3:-80819005 | MS.gene037864:CDS |
| AAAACCATGTAAATAATGAG+CGG | 0.651500 | 8.3:-80822081 | MS.gene037864:CDS |
| CAGGAAGTGAAGCAACGTAA+CGG | 0.652685 | 8.3:+80825418 | None:intergenic |
| TAATGACGGCATAACAAGCA+TGG | 0.654148 | 8.3:-80824065 | MS.gene037864:CDS |
| GAAGCAACCTAACCATGGCA+AGG | 0.654219 | 8.3:+80821339 | None:intergenic |
| TGAAGGTAAGGATCAGAACA+TGG | 0.659752 | 8.3:-80823180 | MS.gene037864:CDS |
| ACTCAGGTAAATCAAAACCA+AGG | 0.660436 | 8.3:-80820812 | MS.gene037864:intron |
| AGTGCCTAACAGTAAACCCA+AGG | 0.662467 | 8.3:-80818063 | MS.gene037864:CDS |
| AGTGACTCGAGGAAGCTCGA+GGG | 0.663036 | 8.3:-80823983 | MS.gene037864:CDS |
| ACAAAACATAACCCCTACTG+TGG | 0.663994 | 8.3:-80823810 | MS.gene037864:CDS |
| GGACGGAAAACATAAAAGAG+AGG | 0.664528 | 8.3:-80820189 | MS.gene037864:CDS |
| AGAACCGAATTTAAAATACA+GGG | 0.667459 | 8.3:-80824095 | MS.gene037864:CDS |
| TTGAAGCAGAAGTACAACAT+CGG | 0.674249 | 8.3:-80821239 | MS.gene037864:CDS |
| AATCATATGACATAGAAACC+TGG | 0.675049 | 8.3:-80818156 | MS.gene037864:CDS |
| TCTGGAGGAGGAGAGAGAGG+AGG | 0.676330 | 8.3:+80825511 | None:intergenic |
| TCATTAGTGAAAGTGACTCG+AGG | 0.676728 | 8.3:-80823994 | MS.gene037864:CDS |
| ATGAGATCATGAGAAAGACA+AGG | 0.685426 | 8.3:-80817988 | MS.gene037864:CDS |
| AAAGGGTTTCCGTGCCCCGG+AGG | 0.686493 | 8.3:-80820150 | MS.gene037864:intron |
| AGGGTCGATCCTGTAGCATG+CGG | 0.686967 | 8.3:-80823647 | MS.gene037864:CDS |
| ACCACAGGGGAAGAACCAGA+CGG | 0.689092 | 8.3:+80820762 | None:intergenic |
| TCTCATGATCTCATTACACG+AGG | 0.690799 | 8.3:+80817997 | None:intergenic |
| CCGTGAAACATCCTTTCCAG+TGG | 0.691680 | 8.3:-80818946 | MS.gene037864:intron |
| GATCGGTCATCCCGTCGACG+CGG | 0.695572 | 8.3:-80825490 | MS.gene037864:CDS |
| AGCGCAAGAATTTACCTCCG+GGG | 0.710001 | 8.3:+80820136 | None:intergenic |
| CCTTCTCGCACATTGAAGGG+GGG | 0.716670 | 8.3:-80823323 | MS.gene037864:CDS |
| AGATGGAAGATGTTGCTCTG+AGG | 0.736893 | 8.3:-80823508 | MS.gene037864:CDS |
| TGTTGAGCATGAGAGACCTG+AGG | 0.737768 | 8.3:-80821886 | MS.gene037864:intron |
| ATTCTTGTCTTGGACCACAG+GGG | 0.743915 | 8.3:+80820749 | None:intergenic |
| AAGACAAGGATGCTTCAACG+AGG | 0.753636 | 8.3:-80817974 | MS.gene037864:CDS |
| ATTGCATAGAATTCTGCACG+AGG | 0.772903 | 8.3:+80820451 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 80817934 | 80825601 | 80817934 | ID=MS.gene037864 |
| chr8.3 | mRNA | 80817934 | 80825601 | 80817934 | ID=MS.gene037864.t1;Parent=MS.gene037864 |
| chr8.3 | exon | 80825271 | 80825601 | 80825271 | ID=MS.gene037864.t1.exon1;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80825271 | 80825601 | 80825271 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80825113 | 80825171 | 80825113 | ID=MS.gene037864.t1.exon2;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80825113 | 80825171 | 80825113 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80823160 | 80824254 | 80823160 | ID=MS.gene037864.t1.exon3;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80823160 | 80824254 | 80823160 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80822733 | 80822793 | 80822733 | ID=MS.gene037864.t1.exon4;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80822733 | 80822793 | 80822733 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80822586 | 80822648 | 80822586 | ID=MS.gene037864.t1.exon5;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80822586 | 80822648 | 80822586 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80822061 | 80822124 | 80822061 | ID=MS.gene037864.t1.exon6;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80822061 | 80822124 | 80822061 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80821887 | 80821980 | 80821887 | ID=MS.gene037864.t1.exon7;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80821887 | 80821980 | 80821887 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80821528 | 80821611 | 80821528 | ID=MS.gene037864.t1.exon8;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80821528 | 80821611 | 80821528 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80821352 | 80821441 | 80821352 | ID=MS.gene037864.t1.exon9;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80821352 | 80821441 | 80821352 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80821237 | 80821264 | 80821237 | ID=MS.gene037864.t1.exon10;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80821237 | 80821264 | 80821237 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80820304 | 80820828 | 80820304 | ID=MS.gene037864.t1.exon11;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80820304 | 80820828 | 80820304 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80820151 | 80820212 | 80820151 | ID=MS.gene037864.t1.exon12;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80820151 | 80820212 | 80820151 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80819108 | 80819217 | 80819108 | ID=MS.gene037864.t1.exon13;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80819108 | 80819217 | 80819108 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80818947 | 80819034 | 80818947 | ID=MS.gene037864.t1.exon14;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80818947 | 80819034 | 80818947 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| chr8.3 | exon | 80817934 | 80818203 | 80817934 | ID=MS.gene037864.t1.exon15;Parent=MS.gene037864.t1 |
| chr8.3 | CDS | 80817934 | 80818203 | 80817934 | ID=cds.MS.gene037864.t1;Parent=MS.gene037864.t1 |
| Gene Sequence |
| Protein sequence |