Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038012.t1 | XP_013468377.1 | 89.3 | 544 | 42 | 4 | 1 | 538 | 1 | 534 | 1.70E-252 | 881.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038012.t1 | Q8GZM7 | 32.1 | 549 | 288 | 17 | 1 | 538 | 1 | 475 | 1.0e-35 | 152.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038012.t1 | A0A072VK93 | 89.3 | 544 | 42 | 4 | 1 | 538 | 1 | 534 | 1.2e-252 | 881.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene038012.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038012.t1 | MTR_1g069155 | 92.647 | 544 | 24 | 4 | 1 | 538 | 1 | 534 | 0.0 | 1001 |
MS.gene038012.t1 | MTR_7g099540 | 64.923 | 325 | 87 | 10 | 208 | 526 | 146 | 449 | 2.79e-116 | 352 |
MS.gene038012.t1 | MTR_7g099540 | 63.746 | 331 | 87 | 11 | 208 | 526 | 146 | 455 | 1.02e-113 | 345 |
MS.gene038012.t1 | MTR_3g449770 | 30.896 | 547 | 274 | 19 | 1 | 519 | 1 | 471 | 1.71e-55 | 194 |
MS.gene038012.t1 | MTR_1g084980 | 60.403 | 149 | 55 | 2 | 263 | 407 | 398 | 546 | 1.10e-42 | 162 |
MS.gene038012.t1 | MTR_7g111320 | 51.534 | 163 | 69 | 3 | 268 | 420 | 373 | 535 | 1.07e-34 | 139 |
MS.gene038012.t1 | MTR_1g019240 | 67.949 | 78 | 23 | 1 | 325 | 400 | 85 | 162 | 2.00e-26 | 108 |
MS.gene038012.t1 | MTR_7g110810 | 46.154 | 143 | 65 | 3 | 295 | 428 | 168 | 307 | 4.83e-25 | 107 |
MS.gene038012.t1 | MTR_5g017040 | 61.111 | 90 | 33 | 1 | 334 | 421 | 114 | 203 | 2.56e-24 | 104 |
MS.gene038012.t1 | MTR_1g084980 | 56.311 | 103 | 43 | 1 | 263 | 363 | 398 | 500 | 1.34e-23 | 104 |
MS.gene038012.t1 | MTR_4g131160 | 40.945 | 127 | 57 | 3 | 276 | 394 | 153 | 269 | 1.86e-18 | 87.8 |
MS.gene038012.t1 | MTR_4g131160 | 40.945 | 127 | 57 | 3 | 276 | 394 | 156 | 272 | 2.07e-18 | 87.8 |
MS.gene038012.t1 | MTR_1g080890 | 48.101 | 79 | 37 | 1 | 327 | 401 | 195 | 273 | 3.44e-17 | 83.6 |
MS.gene038012.t1 | MTR_3g116770 | 36.923 | 130 | 68 | 4 | 327 | 444 | 193 | 320 | 4.47e-16 | 80.9 |
MS.gene038012.t1 | MTR_3g116770 | 36.923 | 130 | 68 | 4 | 327 | 444 | 193 | 320 | 5.08e-16 | 80.5 |
MS.gene038012.t1 | MTR_1g017350 | 40.367 | 109 | 59 | 3 | 327 | 429 | 262 | 370 | 7.13e-16 | 80.1 |
MS.gene038012.t1 | MTR_1g017350 | 41.284 | 109 | 55 | 5 | 327 | 429 | 262 | 367 | 7.88e-16 | 80.1 |
MS.gene038012.t1 | MTR_1g017350 | 41.284 | 109 | 55 | 5 | 327 | 429 | 262 | 367 | 8.71e-16 | 80.1 |
MS.gene038012.t1 | MTR_1g017350 | 40.367 | 109 | 59 | 3 | 327 | 429 | 262 | 370 | 9.10e-16 | 80.1 |
MS.gene038012.t1 | MTR_8g062240 | 46.341 | 82 | 42 | 2 | 327 | 406 | 153 | 234 | 7.95e-15 | 75.5 |
MS.gene038012.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 327 | 394 | 319 | 387 | 1.81e-14 | 76.3 |
MS.gene038012.t1 | MTR_8g099880 | 33.333 | 126 | 80 | 2 | 327 | 448 | 147 | 272 | 2.03e-14 | 74.7 |
MS.gene038012.t1 | MTR_7g053410 | 50.725 | 69 | 33 | 1 | 327 | 394 | 319 | 387 | 2.03e-14 | 76.3 |
MS.gene038012.t1 | MTR_5g037250 | 33.537 | 164 | 96 | 4 | 245 | 406 | 43 | 195 | 2.03e-14 | 73.6 |
MS.gene038012.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 293 | 389 | 241 | 356 | 2.14e-14 | 76.3 |
MS.gene038012.t1 | MTR_3g498825 | 49.315 | 73 | 36 | 1 | 327 | 398 | 149 | 221 | 2.15e-14 | 74.7 |
MS.gene038012.t1 | MTR_8g012290 | 38.793 | 116 | 52 | 3 | 293 | 389 | 241 | 356 | 2.15e-14 | 76.3 |
MS.gene038012.t1 | MTR_4g070320 | 54.688 | 64 | 28 | 1 | 327 | 389 | 145 | 208 | 2.41e-14 | 74.7 |
MS.gene038012.t1 | MTR_5g048860 | 39.496 | 119 | 57 | 4 | 327 | 435 | 367 | 480 | 2.73e-14 | 75.9 |
MS.gene038012.t1 | MTR_1g059270 | 37.838 | 111 | 62 | 3 | 327 | 435 | 162 | 267 | 4.22e-14 | 73.9 |
MS.gene038012.t1 | MTR_8g065740 | 54.688 | 64 | 28 | 1 | 327 | 389 | 307 | 370 | 5.85e-14 | 74.7 |
MS.gene038012.t1 | MTR_5g005110 | 35.455 | 110 | 64 | 2 | 323 | 432 | 222 | 324 | 6.32e-14 | 73.6 |
MS.gene038012.t1 | MTR_3g103030 | 34.906 | 106 | 58 | 2 | 323 | 428 | 227 | 321 | 1.45e-13 | 72.4 |
MS.gene038012.t1 | MTR_7g092510 | 38.053 | 113 | 62 | 4 | 327 | 436 | 175 | 282 | 1.09e-12 | 69.7 |
MS.gene038012.t1 | MTR_1g059270 | 44.928 | 69 | 37 | 1 | 327 | 394 | 162 | 230 | 1.84e-12 | 67.8 |
MS.gene038012.t1 | MTR_1g106470 | 41.333 | 75 | 39 | 1 | 319 | 388 | 185 | 259 | 2.02e-12 | 68.2 |
MS.gene038012.t1 | MTR_1g018090 | 45.455 | 66 | 36 | 0 | 323 | 388 | 272 | 337 | 6.40e-12 | 67.8 |
MS.gene038012.t1 | MTR_6g084120 | 45.833 | 72 | 38 | 1 | 312 | 382 | 142 | 213 | 1.59e-11 | 65.5 |
MS.gene038012.t1 | MTR_1g106460 | 29.907 | 107 | 58 | 2 | 322 | 426 | 235 | 326 | 6.83e-11 | 64.3 |
MS.gene038012.t1 | MTR_7g039110 | 58.182 | 55 | 20 | 1 | 309 | 363 | 284 | 335 | 6.87e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038012.t1 | AT2G20180 | 40.485 | 536 | 205 | 25 | 1 | 512 | 1 | 446 | 9.38e-79 | 255 |
MS.gene038012.t1 | AT2G20180 | 40.485 | 536 | 205 | 25 | 1 | 512 | 1 | 446 | 9.38e-79 | 255 |
MS.gene038012.t1 | AT2G20180 | 40.485 | 536 | 205 | 25 | 1 | 512 | 1 | 446 | 9.38e-79 | 255 |
MS.gene038012.t1 | AT2G20180 | 40.485 | 536 | 205 | 25 | 1 | 512 | 1 | 446 | 9.38e-79 | 255 |
MS.gene038012.t1 | AT2G20180 | 41.667 | 444 | 164 | 19 | 86 | 512 | 10 | 375 | 2.78e-67 | 223 |
MS.gene038012.t1 | AT2G20180 | 41.667 | 444 | 164 | 19 | 86 | 512 | 10 | 375 | 2.78e-67 | 223 |
MS.gene038012.t1 | AT2G20180 | 41.667 | 444 | 164 | 19 | 86 | 512 | 10 | 375 | 2.78e-67 | 223 |
MS.gene038012.t1 | AT2G20180 | 38.971 | 408 | 158 | 19 | 1 | 386 | 1 | 339 | 1.94e-56 | 192 |
MS.gene038012.t1 | AT4G28800 | 32.311 | 489 | 227 | 16 | 29 | 507 | 17 | 411 | 5.58e-54 | 189 |
MS.gene038012.t1 | AT4G28800 | 31.976 | 491 | 226 | 17 | 26 | 507 | 26 | 417 | 2.40e-50 | 179 |
MS.gene038012.t1 | AT4G28790 | 34.286 | 420 | 198 | 14 | 23 | 428 | 16 | 371 | 1.48e-46 | 168 |
MS.gene038012.t1 | AT4G28811 | 33.463 | 514 | 244 | 19 | 31 | 529 | 108 | 538 | 3.54e-40 | 153 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT1G09530 | 33.097 | 423 | 207 | 12 | 32 | 409 | 27 | 418 | 2.29e-39 | 150 |
MS.gene038012.t1 | AT4G28790 | 32.258 | 372 | 187 | 10 | 23 | 385 | 16 | 331 | 4.18e-35 | 135 |
MS.gene038012.t1 | AT4G28815 | 41.146 | 192 | 65 | 7 | 322 | 513 | 65 | 208 | 1.06e-31 | 122 |
MS.gene038012.t1 | AT4G28815 | 41.146 | 192 | 65 | 7 | 322 | 513 | 141 | 284 | 7.43e-31 | 122 |
MS.gene038012.t1 | AT2G46970 | 53.030 | 132 | 53 | 4 | 291 | 417 | 155 | 282 | 8.69e-31 | 124 |
MS.gene038012.t1 | AT2G46970 | 53.030 | 132 | 53 | 4 | 291 | 417 | 164 | 291 | 1.17e-30 | 124 |
MS.gene038012.t1 | AT2G46970 | 53.030 | 132 | 53 | 4 | 291 | 417 | 186 | 313 | 1.22e-30 | 124 |
MS.gene038012.t1 | AT3G59060 | 40.517 | 232 | 110 | 8 | 291 | 500 | 211 | 436 | 2.70e-29 | 120 |
MS.gene038012.t1 | AT3G59060 | 40.517 | 232 | 110 | 8 | 291 | 500 | 211 | 436 | 2.70e-29 | 120 |
MS.gene038012.t1 | AT3G59060 | 40.517 | 232 | 110 | 8 | 291 | 500 | 211 | 436 | 2.70e-29 | 120 |
MS.gene038012.t1 | AT3G59060 | 51.773 | 141 | 53 | 4 | 291 | 416 | 211 | 351 | 1.27e-28 | 119 |
MS.gene038012.t1 | AT5G67110 | 55.446 | 101 | 41 | 2 | 303 | 401 | 67 | 165 | 7.72e-26 | 105 |
MS.gene038012.t1 | AT4G36930 | 62.376 | 101 | 36 | 1 | 302 | 400 | 168 | 268 | 9.50e-26 | 109 |
MS.gene038012.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 292 | 405 | 223 | 339 | 1.45e-24 | 106 |
MS.gene038012.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 292 | 405 | 223 | 339 | 1.45e-24 | 106 |
MS.gene038012.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 292 | 405 | 223 | 339 | 1.49e-24 | 106 |
MS.gene038012.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 292 | 405 | 230 | 346 | 1.72e-24 | 106 |
MS.gene038012.t1 | AT2G43010 | 56.557 | 122 | 40 | 3 | 292 | 405 | 265 | 381 | 3.28e-24 | 106 |
MS.gene038012.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 316 | 388 | 96 | 168 | 2.69e-23 | 100 |
MS.gene038012.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 316 | 388 | 198 | 270 | 5.67e-23 | 101 |
MS.gene038012.t1 | AT4G00050 | 65.753 | 73 | 25 | 0 | 316 | 388 | 198 | 270 | 6.99e-23 | 101 |
MS.gene038012.t1 | AT5G50915 | 35.294 | 204 | 100 | 8 | 262 | 442 | 67 | 261 | 1.51e-20 | 92.0 |
MS.gene038012.t1 | AT5G50915 | 35.294 | 204 | 100 | 8 | 262 | 442 | 67 | 261 | 1.51e-20 | 92.0 |
MS.gene038012.t1 | AT5G50915 | 35.294 | 204 | 100 | 8 | 262 | 442 | 67 | 261 | 3.11e-20 | 91.7 |
MS.gene038012.t1 | AT5G50915 | 35.294 | 204 | 100 | 8 | 262 | 442 | 67 | 261 | 3.11e-20 | 91.7 |
MS.gene038012.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 320 | 389 | 30 | 99 | 7.87e-20 | 89.4 |
MS.gene038012.t1 | AT2G24260 | 58.571 | 70 | 29 | 0 | 320 | 389 | 133 | 202 | 2.96e-19 | 89.7 |
MS.gene038012.t1 | AT3G62090 | 50.000 | 94 | 44 | 2 | 327 | 417 | 167 | 260 | 1.11e-18 | 88.2 |
MS.gene038012.t1 | AT3G62090 | 50.000 | 94 | 44 | 2 | 327 | 417 | 184 | 277 | 1.82e-18 | 87.8 |
MS.gene038012.t1 | AT5G58010 | 60.317 | 63 | 25 | 0 | 327 | 389 | 101 | 163 | 1.83e-18 | 86.7 |
MS.gene038012.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 327 | 389 | 132 | 194 | 1.85e-18 | 86.7 |
MS.gene038012.t1 | AT4G30980 | 60.317 | 63 | 25 | 0 | 327 | 389 | 180 | 242 | 4.86e-18 | 86.3 |
MS.gene038012.t1 | AT1G02340 | 38.806 | 134 | 73 | 6 | 339 | 467 | 134 | 263 | 2.54e-16 | 80.1 |
MS.gene038012.t1 | AT1G02340 | 38.806 | 134 | 73 | 6 | 339 | 467 | 141 | 270 | 2.65e-16 | 80.1 |
MS.gene038012.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 279 | 401 | 34 | 149 | 4.47e-16 | 79.3 |
MS.gene038012.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 279 | 401 | 34 | 149 | 4.47e-16 | 79.3 |
MS.gene038012.t1 | AT1G59640 | 30.481 | 187 | 111 | 5 | 227 | 406 | 45 | 219 | 5.23e-16 | 78.6 |
MS.gene038012.t1 | AT5G61270 | 40.323 | 124 | 65 | 2 | 279 | 401 | 122 | 237 | 1.31e-15 | 79.0 |
MS.gene038012.t1 | AT1G59640 | 38.298 | 141 | 72 | 5 | 280 | 412 | 92 | 225 | 6.98e-15 | 76.6 |
MS.gene038012.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 327 | 394 | 143 | 211 | 1.12e-14 | 75.5 |
MS.gene038012.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 272 | 389 | 168 | 288 | 1.15e-14 | 76.3 |
MS.gene038012.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 272 | 389 | 168 | 288 | 1.15e-14 | 76.3 |
MS.gene038012.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 272 | 389 | 168 | 288 | 1.15e-14 | 76.3 |
MS.gene038012.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 272 | 389 | 168 | 288 | 1.15e-14 | 76.3 |
MS.gene038012.t1 | AT4G36540 | 50.725 | 69 | 33 | 1 | 327 | 394 | 143 | 211 | 1.16e-14 | 75.5 |
MS.gene038012.t1 | AT4G34530 | 41.053 | 95 | 54 | 2 | 301 | 394 | 149 | 242 | 1.45e-14 | 75.5 |
MS.gene038012.t1 | AT1G26260 | 38.017 | 121 | 72 | 2 | 272 | 389 | 146 | 266 | 1.49e-14 | 75.9 |
MS.gene038012.t1 | AT1G26260 | 36.508 | 126 | 77 | 2 | 272 | 394 | 117 | 242 | 1.56e-14 | 75.5 |
MS.gene038012.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 327 | 394 | 208 | 276 | 1.83e-14 | 75.5 |
MS.gene038012.t1 | AT1G10120 | 50.725 | 69 | 33 | 1 | 327 | 394 | 208 | 276 | 1.83e-14 | 75.5 |
MS.gene038012.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 327 | 394 | 304 | 372 | 2.11e-14 | 76.3 |
MS.gene038012.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 327 | 394 | 305 | 373 | 2.23e-14 | 76.3 |
MS.gene038012.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 327 | 394 | 305 | 373 | 2.23e-14 | 76.3 |
MS.gene038012.t1 | AT1G68920 | 50.725 | 69 | 33 | 1 | 327 | 394 | 305 | 373 | 2.23e-14 | 76.3 |
MS.gene038012.t1 | AT3G07340 | 54.688 | 64 | 28 | 1 | 327 | 389 | 260 | 323 | 2.24e-14 | 75.9 |
MS.gene038012.t1 | AT5G48560 | 54.688 | 64 | 28 | 1 | 327 | 389 | 303 | 366 | 2.64e-14 | 75.9 |
MS.gene038012.t1 | AT5G62610 | 54.688 | 64 | 28 | 1 | 327 | 389 | 155 | 218 | 2.83e-14 | 73.9 |
MS.gene038012.t1 | AT5G62610 | 54.688 | 64 | 28 | 1 | 327 | 389 | 155 | 218 | 2.83e-14 | 73.9 |
MS.gene038012.t1 | AT3G07340 | 54.688 | 64 | 28 | 1 | 327 | 389 | 260 | 323 | 2.95e-14 | 75.5 |
MS.gene038012.t1 | AT5G48560 | 54.688 | 64 | 28 | 1 | 327 | 389 | 303 | 366 | 3.10e-14 | 75.5 |
MS.gene038012.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 327 | 394 | 187 | 255 | 7.65e-14 | 73.2 |
MS.gene038012.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 327 | 394 | 187 | 255 | 8.09e-14 | 73.2 |
MS.gene038012.t1 | AT3G23690 | 47.826 | 69 | 35 | 1 | 327 | 394 | 193 | 261 | 8.75e-14 | 73.6 |
MS.gene038012.t1 | AT2G18300 | 47.826 | 69 | 35 | 1 | 327 | 394 | 187 | 255 | 1.31e-13 | 72.8 |
MS.gene038012.t1 | AT1G25330 | 50.000 | 64 | 31 | 1 | 327 | 389 | 106 | 169 | 2.09e-13 | 70.1 |
MS.gene038012.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 327 | 389 | 149 | 212 | 4.23e-13 | 70.1 |
MS.gene038012.t1 | AT1G73830 | 48.438 | 64 | 32 | 1 | 327 | 389 | 149 | 212 | 4.62e-13 | 70.1 |
MS.gene038012.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 327 | 389 | 147 | 210 | 6.28e-13 | 69.3 |
MS.gene038012.t1 | AT1G18400 | 48.438 | 64 | 32 | 1 | 327 | 389 | 147 | 210 | 7.54e-13 | 69.3 |
MS.gene038012.t1 | AT4G28790 | 27.439 | 328 | 173 | 10 | 23 | 341 | 16 | 287 | 8.20e-13 | 69.7 |
MS.gene038012.t1 | AT4G28790 | 27.439 | 328 | 173 | 10 | 23 | 341 | 16 | 287 | 8.20e-13 | 69.7 |
MS.gene038012.t1 | AT4G28790 | 27.439 | 328 | 173 | 10 | 23 | 341 | 16 | 287 | 8.20e-13 | 69.7 |
MS.gene038012.t1 | AT3G57800 | 51.562 | 64 | 30 | 1 | 327 | 389 | 206 | 269 | 8.52e-13 | 70.5 |
MS.gene038012.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 327 | 394 | 187 | 255 | 8.68e-13 | 69.3 |
MS.gene038012.t1 | AT2G14760 | 46.970 | 66 | 35 | 0 | 323 | 388 | 235 | 300 | 1.04e-12 | 69.7 |
MS.gene038012.t1 | AT1G27740 | 44.776 | 67 | 37 | 0 | 322 | 388 | 164 | 230 | 1.27e-12 | 68.6 |
MS.gene038012.t1 | AT2G42300 | 46.377 | 69 | 36 | 1 | 327 | 394 | 187 | 255 | 1.39e-12 | 69.3 |
MS.gene038012.t1 | AT4G33880 | 46.970 | 66 | 35 | 0 | 323 | 388 | 264 | 329 | 1.39e-12 | 69.7 |
MS.gene038012.t1 | AT1G68240 | 41.111 | 90 | 52 | 1 | 311 | 399 | 47 | 136 | 4.40e-12 | 65.5 |
MS.gene038012.t1 | AT1G68240 | 41.111 | 90 | 52 | 1 | 311 | 399 | 47 | 136 | 7.54e-12 | 64.3 |
MS.gene038012.t1 | AT5G43175 | 45.161 | 62 | 34 | 0 | 327 | 388 | 134 | 195 | 2.40e-11 | 64.3 |
MS.gene038012.t1 | AT2G14760 | 43.077 | 65 | 37 | 0 | 324 | 388 | 249 | 313 | 7.56e-11 | 64.3 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTAAATTGGCGGTGGTTT+TGG | 0.202001 | 1.1:+50624858 | None:intergenic |
CCGGCGATGGGAATGGGTTT+AGG | 0.217900 | 1.1:-50618992 | MS.gene038012:CDS |
GCAACTGTAGCTGGTCCTTT+TGG | 0.266955 | 1.1:-50618890 | MS.gene038012:CDS |
CGGCAGGGGTGGCGGCTTCT+CGG | 0.320550 | 1.1:-50624538 | MS.gene038012:CDS |
GGAGAATTAGGCAACATATT+AGG | 0.325301 | 1.1:+50618926 | None:intergenic |
GCAGAGAACCAAGGGAGTTA+AGG | 0.325749 | 1.1:+50618771 | None:intergenic |
GGTTTCTTTGAATGATGTAT+AGG | 0.327763 | 1.1:+50625041 | None:intergenic |
CGGCGATGGGAATGGGTTTA+GGG | 0.327890 | 1.1:-50618991 | MS.gene038012:CDS |
GCTGCTGGCAAAGGAGAATT+AGG | 0.328372 | 1.1:+50618914 | None:intergenic |
CTCTGAAACTCAGATTCTTC+CGG | 0.349431 | 1.1:+50624104 | None:intergenic |
GTTTCTTTGAATGATGTATA+GGG | 0.365818 | 1.1:+50625042 | None:intergenic |
ATCCAACATTGAAGCTTTGT+CGG | 0.371400 | 1.1:+50620853 | None:intergenic |
GTACGCTGCTTCGAGATTAT+CGG | 0.371790 | 1.1:-50624297 | MS.gene038012:CDS |
CTGCAGGAACATGGGGCATA+TGG | 0.374715 | 1.1:+50618843 | None:intergenic |
GCTTGCATTCTGGATGAATC+AGG | 0.377153 | 1.1:+50618815 | None:intergenic |
TGGTAAGGATCTGTGAAGTT+TGG | 0.382377 | 1.1:+50618722 | None:intergenic |
GGTAAGGATCTGTGAAGTTT+GGG | 0.385109 | 1.1:+50618723 | None:intergenic |
TCCATTTGAATATCGAAATC+TGG | 0.386523 | 1.1:+50625080 | None:intergenic |
CAGAGAACCAAGGGAGTTAA+GGG | 0.393263 | 1.1:+50618772 | None:intergenic |
GGATCTGTGAAGTTTGGGTT+TGG | 0.408214 | 1.1:+50618728 | None:intergenic |
GGCATAAATTGCTGAATTCC+AGG | 0.416047 | 1.1:+50619013 | None:intergenic |
TTCTAGCGGGAGTGCTGAAC+CGG | 0.418643 | 1.1:-50624171 | MS.gene038012:CDS |
CTGGCGGTGGTTGTAGTTGC+CGG | 0.419365 | 1.1:+50624824 | None:intergenic |
AGGAGCGCGACGGCGGAGAC+TGG | 0.419387 | 1.1:-50624266 | MS.gene038012:CDS |
CGAGATTATCGGAAACGATC+AGG | 0.421871 | 1.1:-50624286 | MS.gene038012:CDS |
GAAAAGGAAGGGACGTGAAC+CGG | 0.422354 | 1.1:-50624123 | MS.gene038012:CDS |
GTTCATGCAAGAAGATGAAA+TGG | 0.432145 | 1.1:-50624735 | MS.gene038012:CDS |
GATTCATCCGGCGAGGAAAC+CGG | 0.433202 | 1.1:-50624510 | MS.gene038012:CDS |
CATTCATCAGTCGGAAGCGC+CGG | 0.433679 | 1.1:-50624632 | MS.gene038012:CDS |
TGGATTATCTTGGCTCCCAC+TGG | 0.435044 | 1.1:+50617651 | None:intergenic |
AACGAGACCGGCAGGGGTGG+CGG | 0.437941 | 1.1:-50624546 | MS.gene038012:CDS |
TTTGGAATGCGTGATTGATC+TGG | 0.440584 | 1.1:+50618746 | None:intergenic |
TTAGGCAACATATTAGGAAA+TGG | 0.443474 | 1.1:+50618932 | None:intergenic |
GGTGGGGACCGAGGTATTGC+TGG | 0.446521 | 1.1:+50618702 | None:intergenic |
GGTTTCCTCGCCGGATGAAT+CGG | 0.451246 | 1.1:+50624512 | None:intergenic |
TCTTGGCTCCCACTGGTACC+TGG | 0.452130 | 1.1:+50617658 | None:intergenic |
TCCAGATTTCGATATTCAAA+TGG | 0.453129 | 1.1:-50625081 | MS.gene038012:CDS |
TAGAACACAGAAACCGGATA+TGG | 0.455584 | 1.1:-50624474 | MS.gene038012:CDS |
ATGGGTTTAGGGATGGAAAT+GGG | 0.456164 | 1.1:-50618980 | MS.gene038012:CDS |
ATTTATGCCGGCGATGGGAA+TGG | 0.456499 | 1.1:-50618999 | MS.gene038012:CDS |
CGAGAAGCCGCCACCCCTGC+CGG | 0.456524 | 1.1:+50624539 | None:intergenic |
CAGAATGATAATTACGTGAA+AGG | 0.456561 | 1.1:+50625020 | None:intergenic |
GTCATTGCAGTTACAAGTGC+AGG | 0.457289 | 1.1:-50620810 | MS.gene038012:intron |
CAGGTGCAGCTGCAGGAACA+TGG | 0.457934 | 1.1:+50618834 | None:intergenic |
CGTCGCCTGGTTGTTCTAGC+GGG | 0.462418 | 1.1:-50624184 | MS.gene038012:CDS |
TTTATGCCGGCGATGGGAAT+GGG | 0.464614 | 1.1:-50618998 | MS.gene038012:CDS |
GGTGAATAGAACACAGAAAC+CGG | 0.465326 | 1.1:-50624480 | MS.gene038012:CDS |
ATGATACCTATGATGTTTCC+TGG | 0.467201 | 1.1:-50619031 | MS.gene038012:CDS |
GTTCTATTCACCACCATATC+CGG | 0.470011 | 1.1:+50624461 | None:intergenic |
CCAGCAGCAGCAACTGTAGC+TGG | 0.470668 | 1.1:-50618899 | MS.gene038012:CDS |
CCAGCTACAGTTGCTGCTGC+TGG | 0.475321 | 1.1:+50618899 | None:intergenic |
GTTCACTTCTCGCATTACTT+TGG | 0.477874 | 1.1:+50624408 | None:intergenic |
CTTTATGCAGATGATGTCCA+TGG | 0.478571 | 1.1:-50619062 | MS.gene038012:intron |
GATCGAATCTCTCTATGATC+AGG | 0.479842 | 1.1:+50624791 | None:intergenic |
TTAGGGATGGAAATGGGAAT+GGG | 0.480235 | 1.1:-50618974 | MS.gene038012:CDS |
CATTAATTGCTGCACCTGGT+GGG | 0.482274 | 1.1:+50618685 | None:intergenic |
TCAGCAATTTATGCCGGCGA+TGG | 0.482673 | 1.1:-50619005 | MS.gene038012:CDS |
GTTCAGCAAACGAGACCGGC+AGG | 0.485745 | 1.1:-50624554 | MS.gene038012:CDS |
CCTGCATTAATTGCTGCACC+TGG | 0.485944 | 1.1:+50618681 | None:intergenic |
AATGGGTTTAGGGATGGAAA+TGG | 0.486555 | 1.1:-50618981 | MS.gene038012:CDS |
AACCGGAGTTGGACCGGAAA+AGG | 0.489470 | 1.1:-50624139 | MS.gene038012:CDS |
ATATTAGGAAATGGCATCAC+TGG | 0.491333 | 1.1:+50618941 | None:intergenic |
TGAATTCCAGGAAACATCAT+AGG | 0.491738 | 1.1:+50619025 | None:intergenic |
GTTTGTTCAGCAAACGAGAC+CGG | 0.495146 | 1.1:-50624558 | MS.gene038012:CDS |
ATGACAGTTACGTCGTCGCC+TGG | 0.498022 | 1.1:-50624197 | MS.gene038012:CDS |
AACTCCGGTTCTCTATGAAC+CGG | 0.499849 | 1.1:+50624152 | None:intergenic |
ACAGTTGCTGCTGCTGGCAA+AGG | 0.505523 | 1.1:+50618905 | None:intergenic |
GATGAATCAGGTGCAGCTGC+AGG | 0.505773 | 1.1:+50618827 | None:intergenic |
GTTGTAGTTGCCGGTGCCGA+CGG | 0.507949 | 1.1:+50624833 | None:intergenic |
ACCATCTCCGGTTTCCTCGC+CGG | 0.508019 | 1.1:+50624503 | None:intergenic |
GTTCTATTCACCACCATCTC+CGG | 0.514131 | 1.1:+50624491 | None:intergenic |
GGACCGAGGTATTGCTGGTA+AGG | 0.515019 | 1.1:+50618707 | None:intergenic |
TGCGTGTGTGTGAGCACCAC+CGG | 0.519164 | 1.1:-50624242 | MS.gene038012:CDS |
AGGAATCACGCGACTGGCGG+TGG | 0.519980 | 1.1:+50624811 | None:intergenic |
TGGAATTCAGCAATTTATGC+CGG | 0.522421 | 1.1:-50619011 | MS.gene038012:CDS |
CTGAAATCGTGACGGTTGAA+AGG | 0.522705 | 1.1:+50624671 | None:intergenic |
ATTTAGAAAACCGTCGGCAC+CGG | 0.522972 | 1.1:-50624843 | MS.gene038012:CDS |
ATAGCGAACCTTGGTCCAAA+AGG | 0.525545 | 1.1:+50618875 | None:intergenic |
GCAACAAGACGATGAGATCA+TGG | 0.527589 | 1.1:-50624918 | MS.gene038012:CDS |
TTCTCGGCCTCCGATTCATC+CGG | 0.528261 | 1.1:-50624522 | MS.gene038012:CDS |
AGGTGCAGCTGCAGGAACAT+GGG | 0.528619 | 1.1:+50618835 | None:intergenic |
TTTAGGGATGGAAATGGGAA+TGG | 0.534529 | 1.1:-50618975 | MS.gene038012:CDS |
ATGGAACTATTGTGGCAAAA+CGG | 0.535259 | 1.1:-50624899 | MS.gene038012:CDS |
ATAGAGAACCGGAGTTGGAC+CGG | 0.535858 | 1.1:-50624145 | MS.gene038012:CDS |
GTCAACAGACCAGGTACCAG+TGG | 0.537139 | 1.1:-50617667 | MS.gene038012:CDS |
CAGCAATTTATGCCGGCGAT+GGG | 0.537150 | 1.1:-50619004 | MS.gene038012:CDS |
AACACCGCCGTGTTTCTGAC+CGG | 0.541272 | 1.1:+50624613 | None:intergenic |
TCAGCAAACGAGACCGGCAG+GGG | 0.544570 | 1.1:-50624552 | MS.gene038012:CDS |
GCAATACCTCGGTCCCCACC+AGG | 0.546189 | 1.1:-50618699 | MS.gene038012:CDS |
AACGATCAGGAGCGCGACGG+CGG | 0.546234 | 1.1:-50624273 | MS.gene038012:CDS |
ATTCATGTAGTTATCTGCAT+CGG | 0.548506 | 1.1:+50624766 | None:intergenic |
GTCCGACAAAGCTTCAATGT+TGG | 0.553364 | 1.1:-50620855 | MS.gene038012:CDS |
ATTAATTGCTGCACCTGGTG+GGG | 0.553799 | 1.1:+50618686 | None:intergenic |
ATCTGGAGGCAGAGAACCAA+GGG | 0.555021 | 1.1:+50618763 | None:intergenic |
GCATTAATTGCTGCACCTGG+TGG | 0.556345 | 1.1:+50618684 | None:intergenic |
ATTATGAACCTCTGCAGCAC+GGG | 0.558566 | 1.1:+50621120 | None:intergenic |
GCAAACGAGACCGGCAGGGG+TGG | 0.560535 | 1.1:-50624549 | MS.gene038012:CDS |
ATGATCAGGAATCACGCGAC+TGG | 0.564484 | 1.1:+50624805 | None:intergenic |
TGAACCGGTTCATAGAGAAC+CGG | 0.564686 | 1.1:-50624156 | MS.gene038012:CDS |
AGGTATCATGCCACATCCCA+TGG | 0.569792 | 1.1:+50619045 | None:intergenic |
CCTAAACCCATTCCCATCGC+CGG | 0.569958 | 1.1:+50618992 | None:intergenic |
GGAACATGGGGCATATGGAA+AGG | 0.576243 | 1.1:+50618848 | None:intergenic |
AAAGAGATCCCGTGCTGCAG+AGG | 0.580112 | 1.1:-50621128 | MS.gene038012:CDS |
AAACTCCGACTCACGTTCCG+TGG | 0.580438 | 1.1:+50624577 | None:intergenic |
CCAGGTGCAGCAATTAATGC+AGG | 0.585533 | 1.1:-50618681 | MS.gene038012:intron |
GGTTCATAGAGAACCGGAGT+TGG | 0.586478 | 1.1:-50624150 | MS.gene038012:CDS |
GGTGCAGCTGCAGGAACATG+GGG | 0.593185 | 1.1:+50618836 | None:intergenic |
ATGAGATCATGGAACTATTG+TGG | 0.596163 | 1.1:-50624907 | MS.gene038012:CDS |
ACAAGCCACGGAACGTGAGT+CGG | 0.600009 | 1.1:-50624582 | MS.gene038012:CDS |
CAGATGATGTCCATGGGATG+TGG | 0.601497 | 1.1:-50619055 | MS.gene038012:CDS |
ATCGAACTCGAAGATGCACC+TGG | 0.602615 | 1.1:+50624386 | None:intergenic |
TTCAGCAAACGAGACCGGCA+GGG | 0.603612 | 1.1:-50624553 | MS.gene038012:CDS |
GGCGAGGAAACCGGAGATGG+TGG | 0.604411 | 1.1:-50624501 | MS.gene038012:CDS |
TGCAGCGGCAAGAGAATCGA+CGG | 0.605167 | 1.1:-50624360 | MS.gene038012:CDS |
AGAGAACCAAGGGAGTTAAG+GGG | 0.605857 | 1.1:+50618773 | None:intergenic |
GCTGCACCTGGTGGGGACCG+AGG | 0.609026 | 1.1:+50618693 | None:intergenic |
TCCGGCGAGGAAACCGGAGA+TGG | 0.609760 | 1.1:-50624504 | MS.gene038012:CDS |
TTTATGCAGATGATGTCCAT+GGG | 0.610157 | 1.1:-50619061 | MS.gene038012:intron |
GATTATGAACCTCTGCAGCA+CGG | 0.610880 | 1.1:+50621119 | None:intergenic |
CGGAAAAGCTGCGACGACGT+TGG | 0.612425 | 1.1:-50624222 | MS.gene038012:CDS |
GAATATCGAAATCTGGAACA+TGG | 0.612681 | 1.1:+50625087 | None:intergenic |
TTCCTCGCCGGATGAATCGG+AGG | 0.613809 | 1.1:+50624515 | None:intergenic |
AGTAATGCGAGAAGTGAACC+AGG | 0.615012 | 1.1:-50624404 | MS.gene038012:CDS |
AAAGGAGGCATAGCGAACCT+TGG | 0.615246 | 1.1:+50618866 | None:intergenic |
GGAGTTGGACCGGAAAAGGA+AGG | 0.615583 | 1.1:-50624135 | MS.gene038012:CDS |
AACACAGAAACCGGATATGG+TGG | 0.616872 | 1.1:-50624471 | MS.gene038012:CDS |
TGTTATACAAGCACAAGCCA+CGG | 0.625309 | 1.1:-50624594 | MS.gene038012:CDS |
GGTTCATAATCTCTCAGAGA+GGG | 0.625587 | 1.1:-50621107 | MS.gene038012:intron |
CAGCAAAATGTCAACAGACC+AGG | 0.626812 | 1.1:-50617676 | MS.gene038012:CDS |
ACTTATACCGCGGTGCAACA+AGG | 0.628814 | 1.1:-50620963 | MS.gene038012:intron |
GAGAACCAAGGGAGTTAAGG+GGG | 0.629551 | 1.1:+50618774 | None:intergenic |
TCGTCGCCTGGTTGTTCTAG+CGG | 0.629552 | 1.1:-50624185 | MS.gene038012:CDS |
GAGTTGGACCGGAAAAGGAA+GGG | 0.631011 | 1.1:-50624134 | MS.gene038012:CDS |
AGAATCTGAGTTTCAGAGCG+AGG | 0.634691 | 1.1:-50624099 | MS.gene038012:intron |
GGAAGCGCCGGTCAGAAACA+CGG | 0.635704 | 1.1:-50624620 | MS.gene038012:CDS |
GGAATGCGTGATTGATCTGG+AGG | 0.645810 | 1.1:+50618749 | None:intergenic |
ATCAGGAATCACGCGACTGG+CGG | 0.647878 | 1.1:+50624808 | None:intergenic |
GATGGGAATGGGTTTAGGGA+TGG | 0.648410 | 1.1:-50618987 | MS.gene038012:CDS |
AAATCGTGACGGTTGAAAGG+AGG | 0.650313 | 1.1:+50624674 | None:intergenic |
CTTTGCAAGAACTTATACCG+CGG | 0.653949 | 1.1:-50620973 | MS.gene038012:CDS |
GGCCTCCGATTCATCCGGCG+AGG | 0.655663 | 1.1:-50624517 | MS.gene038012:CDS |
ACATGGGGCATATGGAAAGG+AGG | 0.660166 | 1.1:+50618851 | None:intergenic |
GGAAACGATCAGGAGCGCGA+CGG | 0.663906 | 1.1:-50624276 | MS.gene038012:CDS |
TTCGAGTTCGATGATTGCAG+CGG | 0.665279 | 1.1:-50624375 | MS.gene038012:CDS |
GATCCTTACCAGCAATACCT+CGG | 0.665739 | 1.1:-50618710 | MS.gene038012:CDS |
GATCTGGAGGCAGAGAACCA+AGG | 0.671898 | 1.1:+50618762 | None:intergenic |
GCACTCCCGCTAGAACAACC+AGG | 0.673024 | 1.1:+50624179 | None:intergenic |
CCGCCAATTTAGAAAACCGT+CGG | 0.675021 | 1.1:-50624849 | MS.gene038012:CDS |
TCTTTGCAGATGTAGATCCA+CGG | 0.678173 | 1.1:+50621146 | None:intergenic |
GGTAGATTCATGTGATACGC+CGG | 0.678374 | 1.1:-50624336 | MS.gene038012:CDS |
TCAACAGACCAGGTACCAGT+GGG | 0.681572 | 1.1:-50617666 | MS.gene038012:CDS |
TGTTTCACCTTGTTGCACCG+CGG | 0.687099 | 1.1:+50620956 | None:intergenic |
AAGAAGATGAAATGGCATCG+TGG | 0.726842 | 1.1:-50624727 | MS.gene038012:CDS |
TTTCTGAACTGAAATCGTGA+CGG | 0.732941 | 1.1:+50624663 | None:intergenic |
AGGTTCATAATCTCTCAGAG+AGG | 0.750433 | 1.1:-50621108 | MS.gene038012:CDS |
AGCGGCAAGAGAATCGACGG+TGG | 0.788837 | 1.1:-50624357 | MS.gene038012:CDS |
AGCGCCGGTCAGAAACACGG+CGG | 0.810141 | 1.1:-50624617 | MS.gene038012:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 50617639 | 50625117 | 50617639 | ID=MS.gene038012 |
chr1.1 | mRNA | 50617639 | 50625117 | 50617639 | ID=MS.gene038012.t1;Parent=MS.gene038012 |
chr1.1 | exon | 50625035 | 50625117 | 50625035 | ID=MS.gene038012.t1.exon1;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50625035 | 50625117 | 50625035 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50624100 | 50624940 | 50624100 | ID=MS.gene038012.t1.exon2;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50624100 | 50624940 | 50624100 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50621108 | 50621206 | 50621108 | ID=MS.gene038012.t1.exon3;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50621108 | 50621206 | 50621108 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50620964 | 50621029 | 50620964 | ID=MS.gene038012.t1.exon4;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50620964 | 50621029 | 50620964 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50620811 | 50620876 | 50620811 | ID=MS.gene038012.t1.exon5;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50620811 | 50620876 | 50620811 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50618682 | 50619074 | 50618682 | ID=MS.gene038012.t1.exon6;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50618682 | 50619074 | 50618682 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
chr1.1 | exon | 50617639 | 50617707 | 50617639 | ID=MS.gene038012.t1.exon7;Parent=MS.gene038012.t1 |
chr1.1 | CDS | 50617639 | 50617707 | 50617639 | ID=cds.MS.gene038012.t1;Parent=MS.gene038012.t1 |
Gene Sequence |
Protein sequence |