Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038125.t1 | XP_003617278.1 | 98.3 | 544 | 9 | 0 | 1 | 544 | 1 | 544 | 6.10E-282 | 979.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038125.t1 | F4HY56 | 32.0 | 228 | 102 | 6 | 20 | 247 | 41 | 215 | 1.5e-18 | 95.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038125.t1 | G7K365 | 98.3 | 544 | 9 | 0 | 1 | 544 | 1 | 544 | 4.4e-282 | 979.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene038125.t1 | TF | HB-other |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038125.t1 | MTR_5g089870 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1110 |
MS.gene038125.t1 | MTR_3g045830 | 56.080 | 551 | 189 | 8 | 1 | 543 | 1 | 506 | 0.0 | 549 |
MS.gene038125.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.11e-13 | 73.2 |
MS.gene038125.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.11e-13 | 73.2 |
MS.gene038125.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.16e-13 | 73.2 |
MS.gene038125.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.40e-12 | 71.2 |
MS.gene038125.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.45e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038125.t1 | AT4G03250 | 39.432 | 563 | 261 | 17 | 3 | 544 | 4 | 507 | 1.14e-84 | 272 |
MS.gene038125.t1 | AT1G28420 | 55.357 | 56 | 25 | 0 | 20 | 75 | 41 | 96 | 1.67e-14 | 77.4 |
Find 123 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTACAGGATGAGTTGTTTA+AGG | 0.209194 | 5.1:+71315076 | MS.gene038125:intron |
ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5.1:-71314811 | None:intergenic |
TTGACAGAAAAGCAAGTTTC+TGG | 0.241531 | 5.1:+71311836 | MS.gene038125:CDS |
TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5.1:-71314874 | None:intergenic |
GATTGCACCTTTCGGATTTA+AGG | 0.253961 | 5.1:-71312233 | None:intergenic |
CCGTTGCTCTCAACCTCTTT+AGG | 0.296329 | 5.1:-71312022 | None:intergenic |
AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5.1:+71314956 | MS.gene038125:CDS |
CAGGATCGTGGCAGTGGACT+TGG | 0.326571 | 5.1:+71311950 | MS.gene038125:CDS |
GTTGCATGATGTTCATGTTC+AGG | 0.329068 | 5.1:+71314513 | MS.gene038125:CDS |
CTGAAAAGTTTGTCTATGTT+TGG | 0.340704 | 5.1:-71314566 | None:intergenic |
CAAAACGCCTGCACAGCTTA+AGG | 0.344150 | 5.1:+71311661 | MS.gene038125:CDS |
ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5.1:+71312319 | MS.gene038125:CDS |
CCCATGTTGATTGCACCTTT+CGG | 0.370330 | 5.1:-71312241 | None:intergenic |
CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5.1:-71314477 | None:intergenic |
GGAACCTGTTTCATATTGTA+TGG | 0.374331 | 5.1:-71315321 | None:intergenic |
CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5.1:-71314806 | None:intergenic |
GCATGGTGATTATAAGTATC+TGG | 0.393909 | 5.1:+71311997 | MS.gene038125:CDS |
CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5.1:-71312414 | None:intergenic |
GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5.1:+71312333 | MS.gene038125:CDS |
CAATCAATCCAGTGAGGAAC+TGG | 0.405732 | 5.1:-71316104 | None:intergenic |
TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5.1:-71314476 | None:intergenic |
GCCTGCACAGCTTAAGGGCT+TGG | 0.407132 | 5.1:+71311667 | MS.gene038125:CDS |
TATCGTGATGCAGGTGGAGC+AGG | 0.408220 | 5.1:+71315122 | MS.gene038125:CDS |
CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5.1:+71312415 | MS.gene038125:CDS |
AGAGTCTTCATACAAATCTA+AGG | 0.411845 | 5.1:-71314623 | None:intergenic |
AAAACGCCTGCACAGCTTAA+GGG | 0.413028 | 5.1:+71311662 | MS.gene038125:CDS |
GCTCACCTCTGAGCTTTCCT+TGG | 0.413393 | 5.1:-71315360 | None:intergenic |
CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5.1:-71312190 | None:intergenic |
CTTGGTTCTATCTCAGCAAC+AGG | 0.414880 | 5.1:-71315342 | None:intergenic |
ATTGCACCTTTCGGATTTAA+GGG | 0.420903 | 5.1:-71312232 | None:intergenic |
AAAGAAGAAGCAAATGCTAA+TGG | 0.421245 | 5.1:+71311899 | MS.gene038125:CDS |
TCAACCATACAATATGAAAC+AGG | 0.427437 | 5.1:+71315317 | MS.gene038125:CDS |
CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5.1:-71311949 | None:intergenic |
GATGCTTTCAAATGAGACTA+TGG | 0.432046 | 5.1:+71315145 | MS.gene038125:CDS |
GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5.1:-71313965 | None:intergenic |
GTACAGGATGAGTTGTTTAA+GGG | 0.451788 | 5.1:+71315077 | MS.gene038125:intron |
CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5.1:+71312352 | MS.gene038125:CDS |
GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5.1:-71312183 | None:intergenic |
CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5.1:+71314487 | MS.gene038125:CDS |
TTTGTCTATGTTTGGTACCA+TGG | 0.463442 | 5.1:-71314558 | None:intergenic |
TCAAATGCCCCTGGAGGAAG+TGG | 0.466413 | 5.1:-71312388 | None:intergenic |
AGGAAGTCTGCATGTTTGAC+TGG | 0.467186 | 5.1:-71314763 | None:intergenic |
TCCAAGCCCTTAAGCTGTGC+AGG | 0.467500 | 5.1:-71311668 | None:intergenic |
GGATGCCAAGCGCGGTGTTG+AGG | 0.467670 | 5.1:+71314687 | MS.gene038125:CDS |
TTTCTTCATAGCGATCACTA+TGG | 0.468844 | 5.1:-71314735 | None:intergenic |
AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5.1:-71312205 | None:intergenic |
AAGAAGAAGCAAATGCTAAT+GGG | 0.480312 | 5.1:+71311900 | MS.gene038125:CDS |
GCTAATTTCAATTCCTCTGT+CGG | 0.480787 | 5.1:-71311794 | None:intergenic |
TGACAGAAAAGCAAGTTTCT+GGG | 0.481471 | 5.1:+71311837 | MS.gene038125:CDS |
TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5.1:-71313978 | None:intergenic |
GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5.1:+71311944 | MS.gene038125:CDS |
GATTTGTATGAAGACTCTAC+TGG | 0.484462 | 5.1:+71314628 | MS.gene038125:CDS |
GATGCCAAGCGCGGTGTTGA+GGG | 0.484892 | 5.1:+71314688 | MS.gene038125:CDS |
GAATTTGATCCACTTCCTCC+AGG | 0.485743 | 5.1:+71312379 | MS.gene038125:CDS |
GTTTGGCATTCAAATGCCCC+TGG | 0.490524 | 5.1:-71312397 | None:intergenic |
TGCTGATACCAGTTCCTCAC+TGG | 0.497663 | 5.1:+71316096 | MS.gene038125:CDS |
TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5.1:+71314471 | MS.gene038125:CDS |
AACATGGGATATAAACCATC+GGG | 0.519479 | 5.1:+71312256 | MS.gene038125:CDS |
CATACCCTCAACACCGCGCT+TGG | 0.522849 | 5.1:-71314692 | None:intergenic |
TCGTTCAAGTGGTGTCATCC+AGG | 0.523322 | 5.1:+71311931 | MS.gene038125:CDS |
TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5.1:-71314607 | None:intergenic |
TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5.1:+71312102 | MS.gene038125:CDS |
GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5.1:-71314913 | None:intergenic |
ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5.1:+71312273 | MS.gene038125:CDS |
GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5.1:-71313960 | None:intergenic |
CATCACTAAGAATCATAAGA+AGG | 0.545103 | 5.1:+71314666 | MS.gene038125:CDS |
GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5.1:+71314966 | MS.gene038125:CDS |
AGGATCGTGGCAGTGGACTT+GGG | 0.551473 | 5.1:+71311951 | MS.gene038125:CDS |
CAATTCTTCACAACAATGGA+AGG | 0.555876 | 5.1:+71310904 | None:intergenic |
TAAGTATCTGGATCCTAAAG+AGG | 0.555927 | 5.1:+71312009 | MS.gene038125:CDS |
GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5.1:+71312340 | MS.gene038125:CDS |
CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5.1:-71314927 | None:intergenic |
TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5.1:-71312175 | None:intergenic |
CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5.1:+71314927 | MS.gene038125:CDS |
TTCACTTTCAAATATCCCGA+TGG | 0.569594 | 5.1:-71312271 | None:intergenic |
ATCGTGATGCAGGTGGAGCA+GGG | 0.576443 | 5.1:+71315123 | MS.gene038125:CDS |
CAACATGGGATATAAACCAT+CGG | 0.579239 | 5.1:+71312255 | MS.gene038125:CDS |
AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5.1:+71312180 | MS.gene038125:CDS |
TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5.1:+71312240 | MS.gene038125:CDS |
TCTGTTGCAGATGTGACGTA+TGG | 0.582357 | 5.1:+71312064 | MS.gene038125:CDS |
GATTCATATTATACTAAACA+TGG | 0.583805 | 5.1:+71314451 | MS.gene038125:CDS |
AATTTGATCCACTTCCTCCA+GGG | 0.587189 | 5.1:+71312380 | MS.gene038125:CDS |
CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5.1:-71314023 | None:intergenic |
TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5.1:+71314475 | MS.gene038125:CDS |
AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5.1:+71314919 | MS.gene038125:CDS |
CAAGATAAGAAAGCTTTCCA+TGG | 0.592693 | 5.1:+71314541 | MS.gene038125:CDS |
TACAGGATGAGTTGTTTAAG+GGG | 0.596582 | 5.1:+71315078 | MS.gene038125:intron |
TCGGGATATTTGAAAGTGAA+GGG | 0.597023 | 5.1:+71312274 | MS.gene038125:CDS |
AGTCTGCATGTTTGACTGGG+AGG | 0.604885 | 5.1:-71314759 | None:intergenic |
TCGTGCGGAAGCAGTAAGCA+TGG | 0.609438 | 5.1:+71311980 | MS.gene038125:CDS |
ATTTGATCCACTTCCTCCAG+GGG | 0.610594 | 5.1:+71312381 | MS.gene038125:CDS |
TCATCCTCGCTAAAGCTAGA+CGG | 0.613881 | 5.1:-71316070 | None:intergenic |
CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5.1:+71314944 | MS.gene038125:CDS |
TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5.1:+71314005 | MS.gene038125:CDS |
GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5.1:-71314596 | None:intergenic |
AAGCAATATCGTGATGCAGG+TGG | 0.619203 | 5.1:+71315116 | MS.gene038125:CDS |
TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5.1:-71312364 | None:intergenic |
CAAGAACGTATGTATCCTCA+AGG | 0.624443 | 5.1:+71312160 | MS.gene038125:CDS |
CCTAAAGAGGTTGAGAGCAA+CGG | 0.628717 | 5.1:+71312022 | MS.gene038125:CDS |
ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5.1:+71311805 | MS.gene038125:CDS |
GGAAGTCTGCATGTTTGACT+GGG | 0.632535 | 5.1:-71314762 | None:intergenic |
CAGAAAAGCAAGTTTCTGGG+TGG | 0.634139 | 5.1:+71311840 | MS.gene038125:CDS |
CAGATGTGACGTATGGACGC+AGG | 0.634541 | 5.1:+71312071 | MS.gene038125:CDS |
CTTCCACCCTTAAATCCGAA+AGG | 0.637927 | 5.1:+71312226 | MS.gene038125:CDS |
GGGCGACAAGATCGTTCAAG+TGG | 0.643385 | 5.1:+71311920 | MS.gene038125:CDS |
AGTGGTGTCATCCAGGATCG+TGG | 0.644469 | 5.1:+71311938 | MS.gene038125:CDS |
CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5.1:+71312323 | MS.gene038125:CDS |
CAGACAAATCACGATTGTAG+AGG | 0.656746 | 5.1:-71312045 | None:intergenic |
TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5.1:+71314943 | MS.gene038125:CDS |
CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5.1:+71312241 | MS.gene038125:CDS |
CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5.1:+71314806 | MS.gene038125:CDS |
TGGCATTCAAATGCCCCTGG+AGG | 0.673262 | 5.1:-71312394 | None:intergenic |
GCACCTTTCGGATTTAAGGG+TGG | 0.674376 | 5.1:-71312229 | None:intergenic |
TAGAACCAAGGAAAGCTCAG+AGG | 0.675746 | 5.1:+71315355 | MS.gene038125:CDS |
CATAAGAAGGATGCCAAGCG+CGG | 0.680844 | 5.1:+71314679 | MS.gene038125:CDS |
TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5.1:+71314869 | MS.gene038125:CDS |
GGACTTGGGCAAGATTCGTG+CGG | 0.690813 | 5.1:+71311965 | MS.gene038125:CDS |
ACAGGATGAGTTGTTTAAGG+GGG | 0.696588 | 5.1:+71315079 | MS.gene038125:intron |
AGAGCACAAATATCCGACAG+AGG | 0.722247 | 5.1:+71311781 | MS.gene038125:intron |
GATGCCGTCTAGCTTTAGCG+AGG | 0.724075 | 5.1:+71316066 | MS.gene038125:CDS |
AGAAGAAAATAAAGTCTCCG+CGG | 0.726053 | 5.1:+71311616 | MS.gene038125:CDS |
ACAAAACAATCAATCCAGTG+AGG | 0.737591 | 5.1:-71316110 | None:intergenic |
CTGTTGCTGAGATAGAACCA+AGG | 0.743299 | 5.1:+71315343 | MS.gene038125:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGATTATAATTGAAATT+AGG | + | chr5.1:71311172-71311191 | MS.gene038125:intron | 10.0% |
!!! | TTTTTGTTGTTATAATTATT+TGG | + | chr5.1:71311351-71311370 | MS.gene038125:intron | 10.0% |
!! | CATAAAATAATTTAAATGTC+TGG | - | chr5.1:71312902-71312921 | None:intergenic | 15.0% |
!!! | GTTAATATATTTTATCCAAA+GGG | + | chr5.1:71311721-71311740 | MS.gene038125:intron | 15.0% |
!!! | TGTTAATATATTTTATCCAA+AGG | + | chr5.1:71311720-71311739 | MS.gene038125:intron | 15.0% |
!!! | TTAATTAGTTTCCTTAAAAT+CGG | + | chr5.1:71313317-71313336 | MS.gene038125:intron | 15.0% |
!!! | TTTAATTTTTCAAAACTGTA+AGG | + | chr5.1:71312981-71313000 | MS.gene038125:intron | 15.0% |
!! | AATTAAATGACTTGAAACAA+TGG | - | chr5.1:71314269-71314288 | None:intergenic | 20.0% |
!! | AATTACTATGAGTACTTATA+TGG | - | chr5.1:71314331-71314350 | None:intergenic | 20.0% |
!! | ACAGCAAAACAAAAAAAATT+AGG | - | chr5.1:71311233-71311252 | None:intergenic | 20.0% |
!! | ACATAAATGACTTAAATTTG+GGG | + | chr5.1:71311093-71311112 | MS.gene038125:intron | 20.0% |
!! | ACATATAAATAGACAGATTT+AGG | + | chr5.1:71313101-71313120 | MS.gene038125:intron | 20.0% |
!! | AGTTGTATAACATAAATGAA+TGG | - | chr5.1:71313228-71313247 | None:intergenic | 20.0% |
!! | ATGATGCTATTCTTAAAATT+TGG | + | chr5.1:71313477-71313496 | MS.gene038125:intron | 20.0% |
!! | ATGTATTCAAATTGAATCAA+TGG | + | chr5.1:71311005-71311024 | MS.gene038125:intron | 20.0% |
!! | ATTCATTTATGTTATACAAC+TGG | + | chr5.1:71313227-71313246 | MS.gene038125:intron | 20.0% |
!! | CTTATCAAGTTAATTATCAT+TGG | - | chr5.1:71312792-71312811 | None:intergenic | 20.0% |
!! | GACATAAATGACTTAAATTT+GGG | + | chr5.1:71311092-71311111 | MS.gene038125:intron | 20.0% |
!! | GATTCATATTATACTAAACA+TGG | + | chr5.1:71314451-71314470 | MS.gene038125:CDS | 20.0% |
!! | TGACATAAATGACTTAAATT+TGG | + | chr5.1:71311091-71311110 | MS.gene038125:intron | 20.0% |
!! | TTATGAAAAATTCTCAGATA+TGG | + | chr5.1:71311424-71311443 | MS.gene038125:intron | 20.0% |
!! | TTTCACATAACTAATAGAAT+GGG | - | chr5.1:71312476-71312495 | None:intergenic | 20.0% |
!!! | CAATGATAATTAACTTGATA+AGG | + | chr5.1:71312790-71312809 | MS.gene038125:intron | 20.0% |
!!! | GAAATATTTCTAGAAAAACA+TGG | - | chr5.1:71313812-71313831 | None:intergenic | 20.0% |
!!! | TGTTTTCATAGTTATATTGT+AGG | - | chr5.1:71314786-71314805 | None:intergenic | 20.0% |
!!! | TTCTTTTCACATATGATTTA+GGG | + | chr5.1:71312849-71312868 | MS.gene038125:intron | 20.0% |
! | AAAATGAGAATGCATTAGAA+AGG | - | chr5.1:71314050-71314069 | None:intergenic | 25.0% |
! | AAAATTAAATGCAGCTGAAA+TGG | + | chr5.1:71314151-71314170 | MS.gene038125:intron | 25.0% |
! | AATGTTCAATAGTAAGCTTT+CGG | + | chr5.1:71315504-71315523 | MS.gene038125:intron | 25.0% |
! | AGAATAATAATCTTTGTGCA+AGG | + | chr5.1:71313741-71313760 | MS.gene038125:intron | 25.0% |
! | AGAGCAAAAATAAGTTATCT+TGG | - | chr5.1:71313787-71313806 | None:intergenic | 25.0% |
! | AGGTATTAGCATTAGAATAT+AGG | + | chr5.1:71313374-71313393 | MS.gene038125:intron | 25.0% |
! | AGTTAAAGAAATAAGCTTTC+TGG | + | chr5.1:71311398-71311417 | MS.gene038125:intron | 25.0% |
! | ATAAATAGACAGATTTAGGT+AGG | + | chr5.1:71313105-71313124 | MS.gene038125:intron | 25.0% |
! | ATAAGATATACAACAATCAC+AGG | - | chr5.1:71311508-71311527 | None:intergenic | 25.0% |
! | ATCTTCATTAAAGAGGAAAA+AGG | - | chr5.1:71315580-71315599 | None:intergenic | 25.0% |
! | CAACAACTATATTAGAATCT+GGG | + | chr5.1:71313596-71313615 | MS.gene038125:intron | 25.0% |
! | CAATTTATTCTGCTTACAAA+TGG | + | chr5.1:71315026-71315045 | MS.gene038125:intron | 25.0% |
! | CATCACATTGTAAAATTGTT+AGG | + | chr5.1:71312568-71312587 | MS.gene038125:intron | 25.0% |
! | GAAATATTTCATTGTAGCTA+AGG | + | chr5.1:71313822-71313841 | MS.gene038125:intron | 25.0% |
! | GAATTAGTATTTGTTTGATC+TGG | + | chr5.1:71313057-71313076 | MS.gene038125:intron | 25.0% |
! | GTTTCACATAACTAATAGAA+TGG | - | chr5.1:71312477-71312496 | None:intergenic | 25.0% |
! | TAACATAAATGAATGGTCAA+AGG | - | chr5.1:71313221-71313240 | None:intergenic | 25.0% |
! | TAATAAATTGAGCTGCAAAA+AGG | - | chr5.1:71313018-71313037 | None:intergenic | 25.0% |
! | TCAACAACTATATTAGAATC+TGG | + | chr5.1:71313595-71313614 | MS.gene038125:intron | 25.0% |
! | TCTTAGTATTAATACTACCA+AGG | + | chr5.1:71312766-71312785 | MS.gene038125:intron | 25.0% |
! | TTAGGTTAGAATCTACAATA+GGG | + | chr5.1:71311028-71311047 | MS.gene038125:intron | 25.0% |
! | TTCAAATTGAATCAATGGTT+AGG | + | chr5.1:71311010-71311029 | MS.gene038125:intron | 25.0% |
! | TTCTTACCTTTGTATTGTTA+TGG | + | chr5.1:71313923-71313942 | MS.gene038125:intron | 25.0% |
! | TTTATTCTTATCAGCGATTT+GGG | + | chr5.1:71310948-71310967 | MS.gene038125:intron | 25.0% |
!! | ATAATCACATTCTAGAGATA+CGG | - | chr5.1:71315195-71315214 | None:intergenic | 25.0% |
!! | ATCTTTTATCCTTTAACCTT+CGG | - | chr5.1:71311874-71311893 | None:intergenic | 25.0% |
!! | CTTCTTTTCACATATGATTT+AGG | + | chr5.1:71312848-71312867 | MS.gene038125:intron | 25.0% |
!! | GTGAAACTAAAATGTTGTTT+AGG | + | chr5.1:71312490-71312509 | MS.gene038125:intron | 25.0% |
!! | TTGCAAGAGAAACTTTTAAA+CGG | + | chr5.1:71314287-71314306 | MS.gene038125:intron | 25.0% |
!! | TTTATCTAGTCCATATTTTG+AGG | + | chr5.1:71313284-71313303 | MS.gene038125:intron | 25.0% |
!! | TTTTATTCTTATCAGCGATT+TGG | + | chr5.1:71310947-71310966 | MS.gene038125:intron | 25.0% |
!!! | CAATTTTCTGAAAGCATAAT+AGG | - | chr5.1:71315473-71315492 | None:intergenic | 25.0% |
!!! | TCTTCTTACTTAGTTTTTAC+TGG | + | chr5.1:71315984-71316003 | MS.gene038125:intron | 25.0% |
!!! | TTATCTAGTCCATATTTTGA+GGG | + | chr5.1:71313285-71313304 | MS.gene038125:intron | 25.0% |
AAAGAAGAAGCAAATGCTAA+TGG | + | chr5.1:71311899-71311918 | MS.gene038125:CDS | 30.0% | |
AAAGTAAGCTAATCCATTCT+TGG | + | chr5.1:71315548-71315567 | MS.gene038125:intron | 30.0% | |
AACAATATGGCTGATCATTT+AGG | + | chr5.1:71312525-71312544 | MS.gene038125:intron | 30.0% | |
AACCCAAAAAGGTAGTTTAA+GGG | + | chr5.1:71313627-71313646 | MS.gene038125:intron | 30.0% | |
AACTTCTTACCTTTGCTTAA+AGG | + | chr5.1:71314205-71314224 | MS.gene038125:intron | 30.0% | |
AAGAAGAAGCAAATGCTAAT+GGG | + | chr5.1:71311900-71311919 | MS.gene038125:CDS | 30.0% | |
AAGAAGTGAAAGATGTTTGT+AGG | + | chr5.1:71314233-71314252 | MS.gene038125:intron | 30.0% | |
AAGCAAAGGTAAGAAGTTAA+AGG | - | chr5.1:71314203-71314222 | None:intergenic | 30.0% | |
ACTTCTTACCTTTGCTTAAA+GGG | + | chr5.1:71314206-71314225 | MS.gene038125:intron | 30.0% | |
AGAAAGTGAGTCAAACTTAA+GGG | + | chr5.1:71311129-71311148 | MS.gene038125:intron | 30.0% | |
AGAGCTTTACTATATCTAGA+AGG | - | chr5.1:71312208-71312227 | None:intergenic | 30.0% | |
AGAGTCTTCATACAAATCTA+AGG | - | chr5.1:71314626-71314645 | None:intergenic | 30.0% | |
AGCATTAGAATATAGGTTCT+AGG | + | chr5.1:71313381-71313400 | MS.gene038125:intron | 30.0% | |
AGTAAGAAGATAAAACTGTG+AGG | - | chr5.1:71315974-71315993 | None:intergenic | 30.0% | |
ATAACTAATAGAATGGGAAC+TGG | - | chr5.1:71312470-71312489 | None:intergenic | 30.0% | |
ATATACAGTGAGAAAATGAG+AGG | + | chr5.1:71313135-71313154 | MS.gene038125:intron | 30.0% | |
ATGCTAATACCTTAAAAGCA+CGG | - | chr5.1:71313366-71313385 | None:intergenic | 30.0% | |
ATGTTTATGTGCTATGGATT+GGG | + | chr5.1:71312705-71312724 | MS.gene038125:intron | 30.0% | |
ATTGAAATTAGCAATTGCTG+AGG | + | chr5.1:71311805-71311824 | MS.gene038125:CDS | 30.0% | |
CATCACTAAGAATCATAAGA+AGG | + | chr5.1:71314666-71314685 | MS.gene038125:CDS | 30.0% | |
CATGGGAAAACTTAATTACT+AGG | - | chr5.1:71314081-71314100 | None:intergenic | 30.0% | |
CTGAAAAGTTTGTCTATGTT+TGG | - | chr5.1:71314569-71314588 | None:intergenic | 30.0% | |
GAATGCTTAAAGATAGATCT+GGG | + | chr5.1:71312615-71312634 | MS.gene038125:intron | 30.0% | |
GACTACAAGTGAATAAAAGT+AGG | + | chr5.1:71315782-71315801 | MS.gene038125:intron | 30.0% | |
GTTAGGTTAGAATCTACAAT+AGG | + | chr5.1:71311027-71311046 | MS.gene038125:intron | 30.0% | |
TAGCATCCATAACAATACAA+AGG | - | chr5.1:71313932-71313951 | None:intergenic | 30.0% | |
TCAACCATACAATATGAAAC+AGG | + | chr5.1:71315317-71315336 | MS.gene038125:CDS | 30.0% | |
TCATGTATGAGATTTCATGT+TGG | + | chr5.1:71311447-71311466 | MS.gene038125:intron | 30.0% | |
TCCTCTTATCTTCATTAAAG+AGG | - | chr5.1:71315587-71315606 | None:intergenic | 30.0% | |
TCCTCTTTAATGAAGATAAG+AGG | + | chr5.1:71315583-71315602 | MS.gene038125:intron | 30.0% | |
TCGATCCTAAATATGATACT+GGG | - | chr5.1:71313455-71313474 | None:intergenic | 30.0% | |
TGAATGCTTAAAGATAGATC+TGG | + | chr5.1:71312614-71312633 | MS.gene038125:intron | 30.0% | |
TTCAACAAAAATCATCCCTT+TGG | - | chr5.1:71311739-71311758 | None:intergenic | 30.0% | |
TTCATTAAAGAGGAAAAAGG+TGG | - | chr5.1:71315577-71315596 | None:intergenic | 30.0% | |
! | AAGTTAATTATCATTGGCCT+TGG | - | chr5.1:71312786-71312805 | None:intergenic | 30.0% |
! | AATTAAGTTTTCCCATGGAA+TGG | + | chr5.1:71314084-71314103 | MS.gene038125:intron | 30.0% |
! | ATATTTTGTTGCATGTGTAC+AGG | + | chr5.1:71315061-71315080 | MS.gene038125:intron | 30.0% |
! | ATTAAGTTTTCCCATGGAAT+GGG | + | chr5.1:71314085-71314104 | MS.gene038125:intron | 30.0% |
! | CTAGTAATTAAGTTTTCCCA+TGG | + | chr5.1:71314079-71314098 | MS.gene038125:intron | 30.0% |
! | GAATAAGCTATCCGATTTTA+AGG | - | chr5.1:71313331-71313350 | None:intergenic | 30.0% |
! | GTTTGAAACTTGGAACAATA+TGG | + | chr5.1:71312512-71312531 | MS.gene038125:intron | 30.0% |
! | TAATCACATTCTAGAGATAC+GGG | - | chr5.1:71315194-71315213 | None:intergenic | 30.0% |
! | TCAAACTTAAGGGTATGAAA+GGG | + | chr5.1:71311139-71311158 | MS.gene038125:intron | 30.0% |
! | TCTTATTTCCCTTTAAGCAA+AGG | - | chr5.1:71314217-71314236 | None:intergenic | 30.0% |
! | TGTTGTTTAGGTTTGAAACT+TGG | + | chr5.1:71312502-71312521 | MS.gene038125:intron | 30.0% |
!! | CATTTTTCTGAAAATGTCAG+TGG | + | chr5.1:71312097-71312116 | MS.gene038125:CDS | 30.0% |
!! | CTTACAAGACAGTTTTGTAA+GGG | - | chr5.1:71313511-71313530 | None:intergenic | 30.0% |
!! | TACTTAGTTTTTACTGGATG+TGG | + | chr5.1:71315990-71316009 | MS.gene038125:intron | 30.0% |
AAAAAGCAATATCGTGATGC+AGG | + | chr5.1:71315113-71315132 | MS.gene038125:CDS | 35.0% | |
AAAAAGGTGGTTTCCAAGAA+TGG | - | chr5.1:71315564-71315583 | None:intergenic | 35.0% | |
AACATGGGATATAAACCATC+GGG | + | chr5.1:71312256-71312275 | MS.gene038125:CDS | 35.0% | |
AAGTAGATCCAAGTGGTTTA+TGG | - | chr5.1:71311262-71311281 | None:intergenic | 35.0% | |
AATGGGAACTGGAAAGAAAA+AGG | - | chr5.1:71312459-71312478 | None:intergenic | 35.0% | |
ACCCAAAAAGGTAGTTTAAG+GGG | + | chr5.1:71313628-71313647 | MS.gene038125:intron | 35.0% | |
ACTATTAGTGTATCGAGGTA+TGG | - | chr5.1:71313173-71313192 | None:intergenic | 35.0% | |
ACTGCTGTTAAGAAGCAATT+AGG | + | chr5.1:71312319-71312338 | MS.gene038125:CDS | 35.0% | |
AGAAGAAAATAAAGTCTCCG+CGG | + | chr5.1:71311616-71311635 | MS.gene038125:CDS | 35.0% | |
AGAAGATAAAACTGTGAGGT+TGG | - | chr5.1:71315970-71315989 | None:intergenic | 35.0% | |
AGTGTCCCAGTATCATATTT+AGG | + | chr5.1:71313447-71313466 | MS.gene038125:intron | 35.0% | |
ATAGCACATAAACATGATGC+AGG | - | chr5.1:71312700-71312719 | None:intergenic | 35.0% | |
ATAGGGATTGTTTGCATTAC+TGG | + | chr5.1:71311045-71311064 | MS.gene038125:intron | 35.0% | |
ATCGGGATATTTGAAAGTGA+AGG | + | chr5.1:71312273-71312292 | MS.gene038125:CDS | 35.0% | |
ATGGGAACTGGAAAGAAAAA+GGG | - | chr5.1:71312458-71312477 | None:intergenic | 35.0% | |
ATGTGGTGCTTATAAAGCTT+AGG | - | chr5.1:71313544-71313563 | None:intergenic | 35.0% | |
ATTGCACCTTTCGGATTTAA+GGG | - | chr5.1:71312235-71312254 | None:intergenic | 35.0% | |
CAAAACTGTCTTGTAAGGTA+AGG | + | chr5.1:71313514-71313533 | MS.gene038125:intron | 35.0% | |
CAACATGGGATATAAACCAT+CGG | + | chr5.1:71312255-71312274 | MS.gene038125:CDS | 35.0% | |
CAACCCAAAAAGGTAGTTTA+AGG | + | chr5.1:71313626-71313645 | MS.gene038125:intron | 35.0% | |
CAAGATAAGAAAGCTTTCCA+TGG | + | chr5.1:71314541-71314560 | MS.gene038125:CDS | 35.0% | |
CAGTTGCTACATTTATGAAC+AGG | - | chr5.1:71314367-71314386 | None:intergenic | 35.0% | |
CATGTTTATGTGCTATGGAT+TGG | + | chr5.1:71312704-71312723 | MS.gene038125:intron | 35.0% | |
CCTTACAAAACTGTCTTGTA+AGG | + | chr5.1:71313509-71313528 | MS.gene038125:intron | 35.0% | |
CGTTTGCTCAAGTCTTTATA+AGG | + | chr5.1:71313654-71313673 | MS.gene038125:intron | 35.0% | |
CTACTTTCTGTGTGAGATAA+GGG | + | chr5.1:71311276-71311295 | MS.gene038125:intron | 35.0% | |
CTGTTAAGAAGCAATTAGGA+AGG | + | chr5.1:71312323-71312342 | MS.gene038125:CDS | 35.0% | |
GAACTAAACTTCTTGCTTCT+CGG | + | chr5.1:71311563-71311582 | MS.gene038125:intron | 35.0% | |
GAGAAAGTGAGTCAAACTTA+AGG | + | chr5.1:71311128-71311147 | MS.gene038125:intron | 35.0% | |
GATGCTTTCAAATGAGACTA+TGG | + | chr5.1:71315145-71315164 | MS.gene038125:CDS | 35.0% | |
GATTTGTATGAAGACTCTAC+TGG | + | chr5.1:71314628-71314647 | MS.gene038125:CDS | 35.0% | |
GCAATTAGGAAGGAATTATC+AGG | + | chr5.1:71312333-71312352 | MS.gene038125:CDS | 35.0% | |
GCACAATGTTGTTAGAAACA+GGG | - | chr5.1:71316016-71316035 | None:intergenic | 35.0% | |
GCATGGTGATTATAAGTATC+TGG | + | chr5.1:71311997-71312016 | MS.gene038125:CDS | 35.0% | |
GCTAATTTCAATTCCTCTGT+CGG | - | chr5.1:71311797-71311816 | None:intergenic | 35.0% | |
GGAACCTGTTTCATATTGTA+TGG | - | chr5.1:71315324-71315343 | None:intergenic | 35.0% | |
GTACAGGATGAGTTGTTTAA+GGG | + | chr5.1:71315077-71315096 | MS.gene038125:intron | 35.0% | |
GTCGATCCTAAATATGATAC+TGG | - | chr5.1:71313456-71313475 | None:intergenic | 35.0% | |
TAAACATGATGCAGGTTAGA+TGG | - | chr5.1:71312692-71312711 | None:intergenic | 35.0% | |
TAAGCTCCAAAACTTCTAAG+AGG | - | chr5.1:71315417-71315436 | None:intergenic | 35.0% | |
TAAGTATCTGGATCCTAAAG+AGG | + | chr5.1:71312009-71312028 | MS.gene038125:CDS | 35.0% | |
TACAGGATGAGTTGTTTAAG+GGG | + | chr5.1:71315078-71315097 | MS.gene038125:intron | 35.0% | |
TAGGGATTGTTTGCATTACT+GGG | + | chr5.1:71311046-71311065 | MS.gene038125:intron | 35.0% | |
TCAAATTCTACACCAAGTAG+TGG | - | chr5.1:71312367-71312386 | None:intergenic | 35.0% | |
TCCTTCCATATGAGTATCTT+GGG | - | chr5.1:71314479-71314498 | None:intergenic | 35.0% | |
TCGGGATATTTGAAAGTGAA+GGG | + | chr5.1:71312274-71312293 | MS.gene038125:CDS | 35.0% | |
TCTACTTTCTGTGTGAGATA+AGG | + | chr5.1:71311275-71311294 | MS.gene038125:intron | 35.0% | |
TCTTGACTATTAGTGTATCG+AGG | - | chr5.1:71313178-71313197 | None:intergenic | 35.0% | |
TGACAGAAAAGCAAGTTTCT+GGG | + | chr5.1:71311837-71311856 | MS.gene038125:CDS | 35.0% | |
TGCACAATGTTGTTAGAAAC+AGG | - | chr5.1:71316017-71316036 | None:intergenic | 35.0% | |
TGCATCATGTTTATGTGCTA+TGG | + | chr5.1:71312699-71312718 | MS.gene038125:intron | 35.0% | |
TGTACAGGATGAGTTGTTTA+AGG | + | chr5.1:71315076-71315095 | MS.gene038125:intron | 35.0% | |
TTCACTTTCAAATATCCCGA+TGG | - | chr5.1:71312274-71312293 | None:intergenic | 35.0% | |
TTGACAGAAAAGCAAGTTTC+TGG | + | chr5.1:71311836-71311855 | MS.gene038125:CDS | 35.0% | |
TTTCTTCATAGCGATCACTA+TGG | - | chr5.1:71314738-71314757 | None:intergenic | 35.0% | |
TTTGTCTATGTTTGGTACCA+TGG | - | chr5.1:71314561-71314580 | None:intergenic | 35.0% | |
! | AAAAGCACGGCATTATCTTT+AGG | - | chr5.1:71313353-71313372 | None:intergenic | 35.0% |
! | AAGATAATGCCGTGCTTTTA+AGG | + | chr5.1:71313354-71313373 | MS.gene038125:intron | 35.0% |
! | AAGCTTTATAAGCACCACAT+AGG | + | chr5.1:71313544-71313563 | MS.gene038125:intron | 35.0% |
! | AATGTCTGGCTTACAAGTTA+TGG | - | chr5.1:71312888-71312907 | None:intergenic | 35.0% |
! | CAAACTTAAGGGTATGAAAG+GGG | + | chr5.1:71311140-71311159 | MS.gene038125:intron | 35.0% |
! | GAATTGTGGATTGAGTTTGA+AGG | - | chr5.1:71314916-71314935 | None:intergenic | 35.0% |
! | GACTTAAATTTGGGGTCTTT+GGG | + | chr5.1:71311101-71311120 | MS.gene038125:intron | 35.0% |
! | GGAGAAATTTTATACGGGTA+GGG | + | chr5.1:71311688-71311707 | MS.gene038125:intron | 35.0% |
! | GGCTTGGAGAAATTTTATAC+GGG | + | chr5.1:71311683-71311702 | MS.gene038125:CDS | 35.0% |
! | GGGCTTGGAGAAATTTTATA+CGG | + | chr5.1:71311682-71311701 | MS.gene038125:CDS | 35.0% |
! | GTCAAACTTAAGGGTATGAA+AGG | + | chr5.1:71311138-71311157 | MS.gene038125:intron | 35.0% |
! | TAGGGCATACCTTTTTACAA+AGG | - | chr5.1:71315704-71315723 | None:intergenic | 35.0% |
! | TGACTTAAATTTGGGGTCTT+TGG | + | chr5.1:71311100-71311119 | MS.gene038125:intron | 35.0% |
! | TGGAGAAATTTTATACGGGT+AGG | + | chr5.1:71311687-71311706 | MS.gene038125:intron | 35.0% |
! | TGGCTGATCATTTAGGATAA+AGG | + | chr5.1:71312532-71312551 | MS.gene038125:intron | 35.0% |
! | TTCTGAAAATGTCAGTGGAA+TGG | + | chr5.1:71312102-71312121 | MS.gene038125:CDS | 35.0% |
! | TTTTATCCTTTAACCTTCGG+TGG | - | chr5.1:71311871-71311890 | None:intergenic | 35.0% |
! | TTTTGCTTTGGTATGTGTCT+AGG | + | chr5.1:71315266-71315285 | MS.gene038125:intron | 35.0% |
!! | AGACAGTTTTGTAAGGGTTA+AGG | - | chr5.1:71313505-71313524 | None:intergenic | 35.0% |
!! | CCTTACAAGACAGTTTTGTA+AGG | - | chr5.1:71313512-71313531 | None:intergenic | 35.0% |
!! | CTAGAAGCACCTTTGTAAAA+AGG | + | chr5.1:71315692-71315711 | MS.gene038125:intron | 35.0% |
!! | GACAGTTTTGTAAGGGTTAA+GGG | - | chr5.1:71313504-71313523 | None:intergenic | 35.0% |
!! | TTAGAATATAGGTTCTAGGC+TGG | + | chr5.1:71313385-71313404 | MS.gene038125:intron | 35.0% |
!! | TTTACAAAGGTGCTTCTAGT+GGG | - | chr5.1:71315691-71315710 | None:intergenic | 35.0% |
!!! | AGGTGTTGTTTTGCTTGTTT+AGG | + | chr5.1:71313761-71313780 | MS.gene038125:intron | 35.0% |
!!! | GAGCTTTTAGTTTTAGTGTC+AGG | + | chr5.1:71312940-71312959 | MS.gene038125:intron | 35.0% |
!!! | GATTTGGGTCATTGATTTTG+TGG | + | chr5.1:71310963-71310982 | MS.gene038125:intron | 35.0% |
!!! | TTTTACAAAGGTGCTTCTAG+TGG | - | chr5.1:71315692-71315711 | None:intergenic | 35.0% |
AAAATCACAAGGTGTGGGAT+GGG | - | chr5.1:71315744-71315763 | None:intergenic | 40.0% | |
AACTCAATCCACAATTCTCG+AGG | + | chr5.1:71314919-71314938 | MS.gene038125:CDS | 40.0% | |
AACTTAAGGTTCATGGCACT+GGG | + | chr5.1:71313714-71313733 | MS.gene038125:intron | 40.0% | |
AAGAAAGAGGGCTATCTTCT+AGG | + | chr5.1:71314956-71314975 | MS.gene038125:CDS | 40.0% | |
AAGGCAAAATCACAAGGTGT+GGG | - | chr5.1:71315749-71315768 | None:intergenic | 40.0% | |
AATTTGATCCACTTCCTCCA+GGG | + | chr5.1:71312380-71312399 | MS.gene038125:CDS | 40.0% | |
ACACAGAAAGTAGATCCAAG+TGG | - | chr5.1:71311269-71311288 | None:intergenic | 40.0% | |
ACACTCCTTTGCACATTCTT+TGG | - | chr5.1:71314814-71314833 | None:intergenic | 40.0% | |
ACAGGATGAGTTGTTTAAGG+GGG | + | chr5.1:71315079-71315098 | MS.gene038125:intron | 40.0% | |
ACGATATCAATCCCATTCCA+TGG | - | chr5.1:71314099-71314118 | None:intergenic | 40.0% | |
AGCCACAAACCCTCAAAATA+TGG | - | chr5.1:71313297-71313316 | None:intergenic | 40.0% | |
ATTCACTTGTAGTCAAACCG+AGG | - | chr5.1:71315776-71315795 | None:intergenic | 40.0% | |
CAAGAACGTATGTATCCTCA+AGG | + | chr5.1:71312160-71312179 | MS.gene038125:CDS | 40.0% | |
CAGACAAATCACGATTGTAG+AGG | - | chr5.1:71312048-71312067 | None:intergenic | 40.0% | |
CCAATCCAAAGAATGTGCAA+AGG | + | chr5.1:71314806-71314825 | MS.gene038125:CDS | 40.0% | |
CCTTTGCACATTCTTTGGAT+TGG | - | chr5.1:71314809-71314828 | None:intergenic | 40.0% | |
CGATATCAATCCCATTCCAT+GGG | - | chr5.1:71314098-71314117 | None:intergenic | 40.0% | |
CTCCTTCCATATGAGTATCT+TGG | - | chr5.1:71314480-71314499 | None:intergenic | 40.0% | |
CTGTGGATACTGAAGAAAGA+GGG | + | chr5.1:71314944-71314963 | MS.gene038125:CDS | 40.0% | |
GACTAAACTAAACCCTGCTA+GGG | - | chr5.1:71315722-71315741 | None:intergenic | 40.0% | |
GATTGCACCTTTCGGATTTA+AGG | - | chr5.1:71312236-71312255 | None:intergenic | 40.0% | |
GGAAGGAATTATCAGGAAGA+TGG | + | chr5.1:71312340-71312359 | MS.gene038125:CDS | 40.0% | |
GGGTCTTAACTTAAGGTTCA+TGG | + | chr5.1:71313707-71313726 | MS.gene038125:intron | 40.0% | |
GGTTTGAAGGCAAAATCACA+AGG | - | chr5.1:71315755-71315774 | None:intergenic | 40.0% | |
GTCATTGACCATAAACCACT+TGG | + | chr5.1:71311251-71311270 | MS.gene038125:intron | 40.0% | |
GTTGCATGATGTTCATGTTC+AGG | + | chr5.1:71314513-71314532 | MS.gene038125:CDS | 40.0% | |
TAAACTTCTTGCTTCTCGGT+TGG | + | chr5.1:71311567-71311586 | MS.gene038125:intron | 40.0% | |
TAACTTAAGGTTCATGGCAC+TGG | + | chr5.1:71313713-71313732 | MS.gene038125:intron | 40.0% | |
TACTGGGTAGATTGTTGCAA+TGG | + | chr5.1:71311062-71311081 | MS.gene038125:intron | 40.0% | |
TCAGCAATATGGTATGGTTC+TGG | - | chr5.1:71313957-71313976 | None:intergenic | 40.0% | |
TCCCAAGATACTCATATGGA+AGG | + | chr5.1:71314475-71314494 | MS.gene038125:CDS | 40.0% | |
TCTGTGGATACTGAAGAAAG+AGG | + | chr5.1:71314943-71314962 | MS.gene038125:CDS | 40.0% | |
TGAAAGAGAGTGAGAAAGCA+GGG | - | chr5.1:71314410-71314429 | None:intergenic | 40.0% | |
TGGGAACTGGAAAGAAAAAG+GGG | - | chr5.1:71312457-71312476 | None:intergenic | 40.0% | |
TGGTTCCCAAGATACTCATA+TGG | + | chr5.1:71314471-71314490 | MS.gene038125:CDS | 40.0% | |
TTCATTGTAGCTAAGGTGCA+AGG | + | chr5.1:71313829-71313848 | MS.gene038125:intron | 40.0% | |
TTGGTAAATTGAGCTCAACG+TGG | + | chr5.1:71315633-71315652 | MS.gene038125:intron | 40.0% | |
! | CAAAACTTCTAAGAGGACGT+GGG | - | chr5.1:71315410-71315429 | None:intergenic | 40.0% |
! | CATATGGAAGGAGTTGACTT+TGG | + | chr5.1:71314487-71314506 | MS.gene038125:CDS | 40.0% |
! | CTTTTCACTGTGGAGATTTC+TGG | - | chr5.1:71313999-71314018 | None:intergenic | 40.0% |
! | GCCCCTTAAACTACCTTTTT+GGG | - | chr5.1:71313632-71313651 | None:intergenic | 40.0% |
! | GTGATTTTGCCTTCAAACCT+CGG | + | chr5.1:71315756-71315775 | MS.gene038125:intron | 40.0% |
! | TAAAAAGGTATGCCCTAGCA+GGG | + | chr5.1:71315707-71315726 | MS.gene038125:intron | 40.0% |
! | TCAATCCAAAGAAAGCGCAA+AGG | + | chr5.1:71314869-71314888 | MS.gene038125:CDS | 40.0% |
! | TTCTAGAAATAACCTACCCC+AGG | - | chr5.1:71312652-71312671 | None:intergenic | 40.0% |
!! | AGATAGATCTGGGTTTGCTA+TGG | + | chr5.1:71312625-71312644 | MS.gene038125:intron | 40.0% |
!! | GATAGATCTGGGTTTGCTAT+GGG | + | chr5.1:71312626-71312645 | MS.gene038125:intron | 40.0% |
!! | GCTATCTTCTAGGATGACTA+AGG | + | chr5.1:71314966-71314985 | MS.gene038125:CDS | 40.0% |
!! | GGCGTTTTGAGCTTTCTTTT+CGG | - | chr5.1:71311650-71311669 | None:intergenic | 40.0% |
!! | GGGGTAGGTTATTTCTAGAA+TGG | + | chr5.1:71312652-71312671 | MS.gene038125:intron | 40.0% |
!! | GTCCATATTTTGAGGGTTTG+TGG | + | chr5.1:71313292-71313311 | MS.gene038125:intron | 40.0% |
!! | TGTGAGGTTGGTGTGTATTT+GGG | - | chr5.1:71315958-71315977 | None:intergenic | 40.0% |
!!! | CTGTTTTTTCCAGCTAACCA+AGG | - | chr5.1:71315874-71315893 | None:intergenic | 40.0% |
!!! | GCGGAGACTTTATTTTCTTC+TGG | - | chr5.1:71311617-71311636 | None:intergenic | 40.0% |
AAAACGCCTGCACAGCTTAA+GGG | + | chr5.1:71311662-71311681 | MS.gene038125:CDS | 45.0% | |
AAAGAGAGTGAGAAAGCAGG+GGG | - | chr5.1:71314408-71314427 | None:intergenic | 45.0% | |
AAGCAATATCGTGATGCAGG+TGG | + | chr5.1:71315116-71315135 | MS.gene038125:CDS | 45.0% | |
AGAGCACAAATATCCGACAG+AGG | + | chr5.1:71311781-71311800 | MS.gene038125:intron | 45.0% | |
AGGAAGTCTGCATGTTTGAC+TGG | - | chr5.1:71314766-71314785 | None:intergenic | 45.0% | |
AGGCCAAGATCCATATGAGA+TGG | + | chr5.1:71312180-71312199 | MS.gene038125:CDS | 45.0% | |
AGGTCGTAACTCTAGTCGAT+GGG | + | chr5.1:71313564-71313583 | MS.gene038125:intron | 45.0% | |
ATGAGTTGTTTAAGGGGGAC+AGG | + | chr5.1:71315084-71315103 | MS.gene038125:CDS | 45.0% | |
ATTTGATCCACTTCCTCCAG+GGG | + | chr5.1:71312381-71312400 | MS.gene038125:CDS | 45.0% | |
CAAAATCACAAGGTGTGGGA+TGG | - | chr5.1:71315745-71315764 | None:intergenic | 45.0% | |
CAAACTGAAGACGCAGTTCA+TGG | + | chr5.1:71312415-71312434 | MS.gene038125:CDS | 45.0% | |
CATGAACTGCGTCTTCAGTT+TGG | - | chr5.1:71312417-71312436 | None:intergenic | 45.0% | |
CCTAAAGAGGTTGAGAGCAA+CGG | + | chr5.1:71312022-71312041 | MS.gene038125:CDS | 45.0% | |
CGATGCAGGGTCTTAACTTA+AGG | + | chr5.1:71313700-71313719 | MS.gene038125:intron | 45.0% | |
CTACTTACAGAGCTAAGACC+AGG | - | chr5.1:71314026-71314045 | None:intergenic | 45.0% | |
CTAGAAGGCTCCATCTCATA+TGG | - | chr5.1:71312193-71312212 | None:intergenic | 45.0% | |
CTGTTGCTGAGATAGAACCA+AGG | + | chr5.1:71315343-71315362 | MS.gene038125:CDS | 45.0% | |
CTTCCACCCTTAAATCCGAA+AGG | + | chr5.1:71312226-71312245 | MS.gene038125:CDS | 45.0% | |
GAAAGAGAGTGAGAAAGCAG+GGG | - | chr5.1:71314409-71314428 | None:intergenic | 45.0% | |
GAAGAGCAGGATCAGCAATA+TGG | - | chr5.1:71313968-71313987 | None:intergenic | 45.0% | |
GAAGGCAAAATCACAAGGTG+TGG | - | chr5.1:71315750-71315769 | None:intergenic | 45.0% | |
GAATTTGATCCACTTCCTCC+AGG | + | chr5.1:71312379-71312398 | MS.gene038125:CDS | 45.0% | |
GACTAGAGTTACGACCTATG+TGG | - | chr5.1:71313561-71313580 | None:intergenic | 45.0% | |
GAGCGTGAAGTTTGTAGTAG+TGG | + | chr5.1:71313415-71313434 | MS.gene038125:intron | 45.0% | |
GCAGGATCAGCAATATGGTA+TGG | - | chr5.1:71313963-71313982 | None:intergenic | 45.0% | |
GCTCCATCTCATATGGATCT+TGG | - | chr5.1:71312186-71312205 | None:intergenic | 45.0% | |
GGAACTGGAAAGAAAAAGGG+GGG | - | chr5.1:71312455-71312474 | None:intergenic | 45.0% | |
GGAAGTCTGCATGTTTGACT+GGG | - | chr5.1:71314765-71314784 | None:intergenic | 45.0% | |
GGACTAAACTAAACCCTGCT+AGG | - | chr5.1:71315723-71315742 | None:intergenic | 45.0% | |
GGGAACTGGAAAGAAAAAGG+GGG | - | chr5.1:71312456-71312475 | None:intergenic | 45.0% | |
GTAGTCAAACCGAGGTTTGA+AGG | - | chr5.1:71315768-71315787 | None:intergenic | 45.0% | |
GTGAAAGAGAGTGAGAAAGC+AGG | - | chr5.1:71314411-71314430 | None:intergenic | 45.0% | |
GTGTGAGATAAGGGTTTGCA+CGG | + | chr5.1:71311285-71311304 | MS.gene038125:intron | 45.0% | |
TAGAACCAAGGAAAGCTCAG+AGG | + | chr5.1:71315355-71315374 | MS.gene038125:CDS | 45.0% | |
TAGGTCGTAACTCTAGTCGA+TGG | + | chr5.1:71313563-71313582 | MS.gene038125:intron | 45.0% | |
TCACTCCTTTGCGCTTTCTT+TGG | - | chr5.1:71314877-71314896 | None:intergenic | 45.0% | |
TCATCCTCGCTAAAGCTAGA+CGG | - | chr5.1:71316073-71316092 | None:intergenic | 45.0% | |
TCTGGAGAATTCAGAAGAGC+AGG | - | chr5.1:71313981-71314000 | None:intergenic | 45.0% | |
TCTGTCGGATATTTGTGCTC+TGG | - | chr5.1:71311782-71311801 | None:intergenic | 45.0% | |
TCTGTTGCAGATGTGACGTA+TGG | + | chr5.1:71312064-71312083 | MS.gene038125:CDS | 45.0% | |
TGGGTAGATTGTTGCAATGG+TGG | + | chr5.1:71311065-71311084 | MS.gene038125:intron | 45.0% | |
! | AAGGTGCTTCTAGTGGGATT+CGG | - | chr5.1:71315685-71315704 | None:intergenic | 45.0% |
! | CAGAAAAGCAAGTTTCTGGG+TGG | + | chr5.1:71311840-71311859 | MS.gene038125:CDS | 45.0% |
! | CCAAAACTTCTAAGAGGACG+TGG | - | chr5.1:71315411-71315430 | None:intergenic | 45.0% |
! | CCACGTCCTCTTAGAAGTTT+TGG | + | chr5.1:71315408-71315427 | MS.gene038125:intron | 45.0% |
! | CCCATGTTGATTGCACCTTT+CGG | - | chr5.1:71312244-71312263 | None:intergenic | 45.0% |
! | CCGAAAGGTGCAATCAACAT+GGG | + | chr5.1:71312241-71312260 | MS.gene038125:CDS | 45.0% |
! | CGCCCCTTAAACTACCTTTT+TGG | - | chr5.1:71313633-71313652 | None:intergenic | 45.0% |
! | GTAAAAAGGTATGCCCTAGC+AGG | + | chr5.1:71315706-71315725 | MS.gene038125:intron | 45.0% |
! | GTTTTGCCACCGAAGGTTAA+AGG | + | chr5.1:71311862-71311881 | MS.gene038125:CDS | 45.0% |
! | TCCGAAAGGTGCAATCAACA+TGG | + | chr5.1:71312240-71312259 | MS.gene038125:CDS | 45.0% |
! | TCTTTTCGGAAACTTCTCCG+CGG | - | chr5.1:71311636-71311655 | None:intergenic | 45.0% |
!! | AGCGTAAAGTGCTGCTTAGT+TGG | + | chr5.1:71315614-71315633 | MS.gene038125:intron | 45.0% |
!! | AGTAATGCCAGTCGTTTTCC+TGG | + | chr5.1:71314589-71314608 | MS.gene038125:CDS | 45.0% |
!! | CTGTGAGGTTGGTGTGTATT+TGG | - | chr5.1:71315959-71315978 | None:intergenic | 45.0% |
!! | CTTGGTTCTATCTCAGCAAC+AGG | - | chr5.1:71315345-71315364 | None:intergenic | 45.0% |
!! | TCATATGGATCTTGGCCTTG+AGG | - | chr5.1:71312178-71312197 | None:intergenic | 45.0% |
!!! | GCACACATGCTGTTTTGCTT+TGG | + | chr5.1:71315254-71315273 | MS.gene038125:intron | 45.0% |
!! | AATTTATTAATATTTGTATT+TGG | + | chr5.1:71313029-71313048 | MS.gene038125:intron | 5.0% |
AAACAGCATGTGTGCGTGCA+TGG | - | chr5.1:71315249-71315268 | None:intergenic | 50.0% | |
AGTCTGCATGTTTGACTGGG+AGG | - | chr5.1:71314762-71314781 | None:intergenic | 50.0% | |
AGTTAAGACCCTGCATCGAG+TGG | - | chr5.1:71313698-71313717 | None:intergenic | 50.0% | |
ATGTCTGCAGTCGTACGCAA+GGG | + | chr5.1:71315845-71315864 | MS.gene038125:intron | 50.0% | |
CAAAACGCCTGCACAGCTTA+AGG | + | chr5.1:71311661-71311680 | MS.gene038125:CDS | 50.0% | |
CAGGAAGATGGTCCACTACT+TGG | + | chr5.1:71312352-71312371 | MS.gene038125:CDS | 50.0% | |
CATAAGAAGGATGCCAAGCG+CGG | + | chr5.1:71314679-71314698 | MS.gene038125:CDS | 50.0% | |
CCACAATTCTCGAGGTTCTG+TGG | + | chr5.1:71314927-71314946 | MS.gene038125:CDS | 50.0% | |
CCACAGAACCTCGAGAATTG+TGG | - | chr5.1:71314930-71314949 | None:intergenic | 50.0% | |
CCGTTGCTCTCAACCTCTTT+AGG | - | chr5.1:71312025-71312044 | None:intergenic | 50.0% | |
CTACAAACTTCACGCTCCAG+AGG | - | chr5.1:71313412-71313431 | None:intergenic | 50.0% | |
CTGAAGACGCAGTTCATGGT+AGG | + | chr5.1:71312419-71312438 | MS.gene038125:intron | 50.0% | |
GAGATAAGGGTTTGCACGGA+AGG | + | chr5.1:71311289-71311308 | MS.gene038125:intron | 50.0% | |
GCACCTTTCGGATTTAAGGG+TGG | - | chr5.1:71312232-71312251 | None:intergenic | 50.0% | |
GGGCTCAACTCAACCCAAAA+AGG | + | chr5.1:71313616-71313635 | MS.gene038125:intron | 50.0% | |
GTTAAGACCCTGCATCGAGT+GGG | - | chr5.1:71313697-71313716 | None:intergenic | 50.0% | |
GTTTGGCATTCAAATGCCCC+TGG | - | chr5.1:71312400-71312419 | None:intergenic | 50.0% | |
TATGTCTGCAGTCGTACGCA+AGG | + | chr5.1:71315844-71315863 | MS.gene038125:intron | 50.0% | |
TCCACAGTGAAAAGTCGACC+TGG | + | chr5.1:71314005-71314024 | MS.gene038125:CDS | 50.0% | |
TCTAAGGAAGAGTTCCTGCC+AGG | - | chr5.1:71314610-71314629 | None:intergenic | 50.0% | |
TGCTGATACCAGTTCCTCAC+TGG | + | chr5.1:71316096-71316115 | MS.gene038125:CDS | 50.0% | |
! | TTCTAAGAGGACGTGGGTGT+CGG | - | chr5.1:71315404-71315423 | None:intergenic | 50.0% |
!! | ACCAGGTCGACTTTTCACTG+TGG | - | chr5.1:71314009-71314028 | None:intergenic | 50.0% |
!! | TCGTTCAAGTGGTGTCATCC+AGG | + | chr5.1:71311931-71311950 | MS.gene038125:CDS | 50.0% |
AGCATGTGTGCGTGCATGGA+AGG | - | chr5.1:71315245-71315264 | None:intergenic | 55.0% | |
ATCGTGATGCAGGTGGAGCA+GGG | + | chr5.1:71315123-71315142 | MS.gene038125:CDS | 55.0% | |
ATGTGTGCGTGCATGGAAGG+AGG | - | chr5.1:71315242-71315261 | None:intergenic | 55.0% | |
CAAGGGACACCTTGGTTAGC+TGG | + | chr5.1:71315862-71315881 | MS.gene038125:intron | 55.0% | |
CAGATGTGACGTATGGACGC+AGG | + | chr5.1:71312071-71312090 | MS.gene038125:CDS | 55.0% | |
CCATATGCCCACTCGATGCA+GGG | + | chr5.1:71313687-71313706 | MS.gene038125:intron | 55.0% | |
GCTCACCTCTGAGCTTTCCT+TGG | - | chr5.1:71315363-71315382 | None:intergenic | 55.0% | |
GGACTTGGGCAAGATTCGTG+CGG | + | chr5.1:71311965-71311984 | MS.gene038125:CDS | 55.0% | |
GGGCGACAAGATCGTTCAAG+TGG | + | chr5.1:71311920-71311939 | MS.gene038125:CDS | 55.0% | |
GTTCCTGCCAGGAAAACGAC+TGG | - | chr5.1:71314599-71314618 | None:intergenic | 55.0% | |
TATCGTGATGCAGGTGGAGC+AGG | + | chr5.1:71315122-71315141 | MS.gene038125:CDS | 55.0% | |
TCAAATGCCCCTGGAGGAAG+TGG | - | chr5.1:71312391-71312410 | None:intergenic | 55.0% | |
TCCAAGCCCTTAAGCTGTGC+AGG | - | chr5.1:71311671-71311690 | None:intergenic | 55.0% | |
TCCATATGCCCACTCGATGC+AGG | + | chr5.1:71313686-71313705 | MS.gene038125:intron | 55.0% | |
TCGTGCGGAAGCAGTAAGCA+TGG | + | chr5.1:71311980-71311999 | MS.gene038125:CDS | 55.0% | |
TCTAAGAGGACGTGGGTGTC+GGG | - | chr5.1:71315403-71315422 | None:intergenic | 55.0% | |
TGGCATTCAAATGCCCCTGG+AGG | - | chr5.1:71312397-71312416 | None:intergenic | 55.0% | |
! | AGGATCGTGGCAGTGGACTT+GGG | + | chr5.1:71311951-71311970 | MS.gene038125:CDS | 55.0% |
!! | AGTGGTGTCATCCAGGATCG+TGG | + | chr5.1:71311938-71311957 | MS.gene038125:CDS | 55.0% |
!! | ATCTGGGTTTGCTATGGGCC+TGG | + | chr5.1:71312631-71312650 | MS.gene038125:intron | 55.0% |
!! | ATGCCAGTCGTTTTCCTGGC+AGG | + | chr5.1:71314593-71314612 | MS.gene038125:CDS | 55.0% |
!! | GATGCCGTCTAGCTTTAGCG+AGG | + | chr5.1:71316066-71316085 | MS.gene038125:CDS | 55.0% |
!! | TAGGTTCTAGGCTGGACCTC+TGG | + | chr5.1:71313393-71313412 | MS.gene038125:intron | 55.0% |
!! | TCTGGGTTTGCTATGGGCCT+GGG | + | chr5.1:71312632-71312651 | MS.gene038125:intron | 55.0% |
CAAGTCCACTGCCACGATCC+TGG | - | chr5.1:71311952-71311971 | None:intergenic | 60.0% | |
CATACCCTCAACACCGCGCT+TGG | - | chr5.1:71314695-71314714 | None:intergenic | 60.0% | |
CCCTGCATCGAGTGGGCATA+TGG | - | chr5.1:71313690-71313709 | None:intergenic | 60.0% | |
GCCTGCACAGCTTAAGGGCT+TGG | + | chr5.1:71311667-71311686 | MS.gene038125:CDS | 60.0% | |
GTCATCCAGGATCGTGGCAG+TGG | + | chr5.1:71311944-71311963 | MS.gene038125:CDS | 60.0% | |
GTCGTACGCAAGGGACACCT+TGG | + | chr5.1:71315854-71315873 | MS.gene038125:intron | 60.0% | |
! | CAGGATCGTGGCAGTGGACT+TGG | + | chr5.1:71311950-71311969 | MS.gene038125:CDS | 60.0% |
! | GATGCCAAGCGCGGTGTTGA+GGG | + | chr5.1:71314688-71314707 | MS.gene038125:CDS | 60.0% |
!! | CTGGGTGGTTTTGCCACCGA+AGG | + | chr5.1:71311855-71311874 | MS.gene038125:CDS | 60.0% |
!! | CTGGGTTTGCTATGGGCCTG+GGG | + | chr5.1:71312633-71312652 | MS.gene038125:intron | 60.0% |
!! | GTTTGCTATGGGCCTGGGGT+AGG | + | chr5.1:71312637-71312656 | MS.gene038125:intron | 60.0% |
! | GGATGCCAAGCGCGGTGTTG+AGG | + | chr5.1:71314687-71314706 | MS.gene038125:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 71310919 | 71316123 | 71310919 | ID=MS.gene038125 |
chr5.1 | mRNA | 71310919 | 71316123 | 71310919 | ID=MS.gene038125.t1;Parent=MS.gene038125 |
chr5.1 | exon | 71310919 | 71310925 | 71310919 | ID=MS.gene038125.t1.exon1;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71310919 | 71310925 | 71310919 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71311597 | 71311704 | 71311597 | ID=MS.gene038125.t1.exon2;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71311597 | 71311704 | 71311597 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71311783 | 71312436 | 71311783 | ID=MS.gene038125.t1.exon3;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71311783 | 71312436 | 71311783 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71313958 | 71314037 | 71313958 | ID=MS.gene038125.t1.exon4;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71313958 | 71314037 | 71313958 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71314445 | 71314987 | 71314445 | ID=MS.gene038125.t1.exon5;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71314445 | 71314987 | 71314445 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71315083 | 71315166 | 71315083 | ID=MS.gene038125.t1.exon6;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71315083 | 71315166 | 71315083 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71315288 | 71315376 | 71315288 | ID=MS.gene038125.t1.exon7;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71315288 | 71315376 | 71315288 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
chr5.1 | exon | 71316054 | 71316123 | 71316054 | ID=MS.gene038125.t1.exon8;Parent=MS.gene038125.t1 |
chr5.1 | CDS | 71316054 | 71316123 | 71316054 | ID=cds.MS.gene038125.t1;Parent=MS.gene038125.t1 |
Gene Sequence |
Protein sequence |