Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038171.t1 | XP_024640189.1 | 80.1 | 680 | 18 | 1 | 1 | 563 | 1 | 680 | 0.00E+00 | 1088.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038171.t1 | Q9SZL8 | 37.1 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 2.4e-47 | 191.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038171.t1 | A0A396HW08 | 80.1 | 680 | 18 | 1 | 1 | 563 | 1 | 680 | 0.0e+00 | 1088.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene038171.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038171.t1 | MTR_0856s0010 | 61.250 | 160 | 52 | 2 | 1 | 150 | 1 | 160 | 1.86e-58 | 194 |
| MS.gene038171.t1 | MTR_5g089200 | 70.423 | 71 | 13 | 1 | 592 | 654 | 233 | 303 | 9.09e-20 | 93.6 |
| MS.gene038171.t1 | MTR_5g089280 | 67.606 | 71 | 15 | 1 | 592 | 654 | 241 | 311 | 4.12e-19 | 91.3 |
| MS.gene038171.t1 | MTR_5g089280 | 67.606 | 71 | 15 | 1 | 592 | 654 | 241 | 311 | 4.26e-19 | 91.7 |
| MS.gene038171.t1 | MTR_6g022070 | 29.412 | 153 | 102 | 3 | 198 | 348 | 1 | 149 | 2.27e-14 | 75.5 |
| MS.gene038171.t1 | MTR_7g074790 | 26.471 | 170 | 107 | 5 | 22 | 187 | 3 | 158 | 4.06e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038171.t1 | AT4G38180 | 37.091 | 275 | 167 | 3 | 193 | 466 | 365 | 634 | 2.25e-52 | 193 |
| MS.gene038171.t1 | AT1G52520 | 33.131 | 329 | 217 | 3 | 193 | 518 | 362 | 690 | 1.20e-50 | 187 |
| MS.gene038171.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 3.22e-50 | 187 |
| MS.gene038171.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 3.22e-50 | 187 |
| MS.gene038171.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 3.22e-50 | 187 |
| MS.gene038171.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 3.22e-50 | 187 |
| MS.gene038171.t1 | AT4G15090 | 31.579 | 361 | 225 | 6 | 193 | 547 | 341 | 685 | 3.22e-50 | 187 |
| MS.gene038171.t1 | AT3G22170 | 32.459 | 305 | 195 | 3 | 205 | 508 | 362 | 656 | 6.07e-48 | 181 |
| MS.gene038171.t1 | AT3G22170 | 32.459 | 305 | 195 | 3 | 205 | 508 | 362 | 656 | 6.07e-48 | 181 |
| MS.gene038171.t1 | AT1G76320 | 32.628 | 331 | 207 | 6 | 193 | 518 | 278 | 597 | 1.33e-44 | 169 |
| MS.gene038171.t1 | AT1G76320 | 32.628 | 331 | 207 | 6 | 193 | 518 | 278 | 597 | 2.29e-44 | 169 |
| MS.gene038171.t1 | AT1G76320 | 32.628 | 331 | 207 | 6 | 193 | 518 | 278 | 597 | 2.53e-44 | 169 |
| MS.gene038171.t1 | AT1G76320 | 32.628 | 331 | 207 | 6 | 193 | 518 | 278 | 597 | 2.53e-44 | 169 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 3.85e-43 | 166 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 3.98e-43 | 167 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 3.98e-43 | 167 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 3.98e-43 | 167 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 4.53e-43 | 166 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 285 | 602 | 4.53e-43 | 166 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 244 | 561 | 5.66e-43 | 166 |
| MS.gene038171.t1 | AT2G32250 | 32.219 | 329 | 209 | 6 | 193 | 518 | 244 | 561 | 5.84e-43 | 166 |
| MS.gene038171.t1 | AT4G38170 | 31.618 | 272 | 180 | 3 | 196 | 466 | 133 | 399 | 3.17e-41 | 158 |
| MS.gene038171.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 1.48e-36 | 147 |
| MS.gene038171.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 1.48e-36 | 147 |
| MS.gene038171.t1 | AT3G06250 | 31.250 | 272 | 177 | 4 | 193 | 464 | 441 | 702 | 1.48e-36 | 147 |
| MS.gene038171.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 8.68e-36 | 144 |
| MS.gene038171.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 312 | 620 | 8.68e-36 | 144 |
| MS.gene038171.t1 | AT2G27110 | 29.781 | 319 | 211 | 6 | 193 | 508 | 167 | 475 | 1.19e-35 | 144 |
| MS.gene038171.t1 | AT4G19990 | 29.870 | 308 | 203 | 5 | 188 | 492 | 229 | 526 | 1.30e-35 | 143 |
| MS.gene038171.t1 | AT4G19990 | 29.870 | 308 | 203 | 5 | 188 | 492 | 286 | 583 | 2.07e-35 | 143 |
| MS.gene038171.t1 | AT4G19990 | 29.870 | 308 | 203 | 5 | 188 | 492 | 286 | 583 | 2.07e-35 | 143 |
| MS.gene038171.t1 | AT4G19990 | 29.870 | 308 | 203 | 5 | 188 | 492 | 286 | 583 | 2.10e-35 | 143 |
| MS.gene038171.t1 | AT4G19990 | 29.870 | 308 | 203 | 5 | 188 | 492 | 300 | 597 | 2.47e-35 | 143 |
| MS.gene038171.t1 | AT4G19990 | 29.739 | 306 | 206 | 4 | 188 | 492 | 286 | 583 | 2.91e-35 | 142 |
| MS.gene038171.t1 | AT4G19990 | 29.739 | 306 | 206 | 4 | 188 | 492 | 286 | 583 | 2.91e-35 | 142 |
| MS.gene038171.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 1.81e-34 | 140 |
| MS.gene038171.t1 | AT5G18960 | 29.932 | 294 | 195 | 5 | 193 | 485 | 465 | 748 | 1.81e-34 | 140 |
| MS.gene038171.t1 | AT1G80010 | 28.159 | 277 | 196 | 3 | 193 | 467 | 387 | 662 | 9.24e-30 | 125 |
| MS.gene038171.t1 | AT1G10240 | 26.148 | 283 | 188 | 6 | 186 | 463 | 338 | 604 | 1.06e-24 | 109 |
| MS.gene038171.t1 | AT1G10240 | 26.148 | 283 | 188 | 6 | 186 | 463 | 338 | 604 | 1.06e-24 | 109 |
| MS.gene038171.t1 | AT5G28530 | 20.769 | 520 | 311 | 14 | 27 | 463 | 50 | 551 | 2.55e-19 | 92.8 |
| MS.gene038171.t1 | AT5G28530 | 20.577 | 520 | 316 | 14 | 27 | 463 | 50 | 555 | 1.81e-18 | 90.1 |
| MS.gene038171.t1 | AT5G12200 | 61.972 | 71 | 19 | 1 | 592 | 654 | 229 | 299 | 2.36e-17 | 86.3 |
| MS.gene038171.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 9.53e-17 | 84.7 |
| MS.gene038171.t1 | AT5G28530 | 23.792 | 269 | 187 | 5 | 197 | 463 | 362 | 614 | 9.53e-17 | 84.7 |
| MS.gene038171.t1 | AT5G28530 | 23.420 | 269 | 192 | 5 | 197 | 463 | 362 | 618 | 7.00e-16 | 82.0 |
Find 105 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGAACTTCTTTGAATT+TGG | 0.140264 | 5.4:-70259983 | None:intergenic |
| AACAATGAACAGCATTTAAT+TGG | 0.170712 | 5.4:+70259082 | MS.gene038171:CDS |
| TAGAGAGTATGCTTTGAAAA+AGG | 0.184139 | 5.4:+70258679 | MS.gene038171:CDS |
| CGAGGGAGCACAATTCATTT+TGG | 0.189374 | 5.4:-70260016 | None:intergenic |
| CACGCCATAGGTGGTGTTTA+TGG | 0.257699 | 5.4:+70259512 | MS.gene038171:CDS |
| CTTGGACTAACTGGTCTTAA+AGG | 0.272670 | 5.4:+70261649 | MS.gene038171:CDS |
| TAAATTGATGTAATGTTTCA+TGG | 0.277147 | 5.4:-70260422 | None:intergenic |
| CTTCAAAGTTGTGTTTAATC+AGG | 0.287821 | 5.4:+70260119 | MS.gene038171:CDS |
| ACGAATACAGTGAATATAAA+AGG | 0.308487 | 5.4:+70259566 | MS.gene038171:CDS |
| GACCAGCCCTACAAAGAAAA+TGG | 0.313866 | 5.4:+70258922 | MS.gene038171:CDS |
| AATAGATCGGAAAGTCTTAA+TGG | 0.322660 | 5.4:-70258996 | None:intergenic |
| ATGATAGAACTTGGACTAAC+TGG | 0.323580 | 5.4:+70261640 | MS.gene038171:CDS |
| TGTTCGTCGTTTGAGTTTAG+AGG | 0.337213 | 5.4:+70260165 | MS.gene038171:CDS |
| TGAATTCCAGCACCATTGTT+TGG | 0.354475 | 5.4:-70260504 | None:intergenic |
| TTCCAACTTAATACAAATCT+TGG | 0.361351 | 5.4:-70258849 | None:intergenic |
| TGCCAAGATTTGTATTAAGT+TGG | 0.381892 | 5.4:+70258847 | MS.gene038171:CDS |
| TTGAAACTTCATGGATAGTT+CGG | 0.390728 | 5.4:+70258526 | None:intergenic |
| TTATGCTTCAACATAATGAT+TGG | 0.395255 | 5.4:+70259674 | MS.gene038171:CDS |
| TGGAATTCACAGTCCATTGC+GGG | 0.395864 | 5.4:+70260518 | MS.gene038171:CDS |
| TATGATACACACACAACAAC+TGG | 0.402034 | 5.4:+70259616 | MS.gene038171:CDS |
| AGCATGCATGCTTTCTTTGA+TGG | 0.408186 | 5.4:+70259790 | MS.gene038171:CDS |
| CACCACCTATGGCGTGTTGT+AGG | 0.409794 | 5.4:-70259505 | None:intergenic |
| TTAAAGGACATCTTCTTTCA+AGG | 0.412333 | 5.4:+70261665 | MS.gene038171:CDS |
| CTGTCTGTCATTACTTCACT+TGG | 0.415840 | 5.4:-70260567 | None:intergenic |
| CTTTGCTACTTATCATGTGT+TGG | 0.420954 | 5.4:+70260059 | MS.gene038171:CDS |
| TGCTACTTATCATGTGTTGG+AGG | 0.424099 | 5.4:+70260062 | MS.gene038171:CDS |
| TGTATGAAGAGCGTCATAGA+TGG | 0.424359 | 5.4:+70259707 | MS.gene038171:CDS |
| ATCGTGAAGGTTCTAAAATC+AGG | 0.426549 | 5.4:+70261897 | MS.gene038171:CDS |
| CTTGTTAAAACATACTTCTC+TGG | 0.429704 | 5.4:-70260243 | None:intergenic |
| AATGTGTAGGAGTGCAATAT+TGG | 0.431270 | 5.4:+70260676 | MS.gene038171:intron |
| CAGCATTTAATTGGAAAAGA+AGG | 0.443510 | 5.4:+70259091 | MS.gene038171:CDS |
| TTGGAGGAGGTTGTAGTTGG+AGG | 0.455878 | 5.4:+70260078 | MS.gene038171:CDS |
| AACATTCACAGCTGAAATCA+TGG | 0.459314 | 5.4:-70260146 | None:intergenic |
| ACATCAATTTAAGTGTAGTA+AGG | 0.462673 | 5.4:+70260434 | MS.gene038171:CDS |
| CAACAGAAAATGATAGAACT+TGG | 0.466596 | 5.4:+70261631 | MS.gene038171:CDS |
| ATTGAGGTTGTCAGTGGTGG+TGG | 0.468328 | 5.4:+70260745 | MS.gene038171:CDS |
| TGTATTAAGTTGGAAAAGGA+TGG | 0.471002 | 5.4:+70258857 | MS.gene038171:CDS |
| GCATGCATGCTTTCTTTGAT+GGG | 0.490315 | 5.4:+70259791 | MS.gene038171:CDS |
| AGTTGGAAAAGGATGGTTTG+TGG | 0.490374 | 5.4:+70258864 | MS.gene038171:CDS |
| GTGTTGGAGGAGGTTGTAGT+TGG | 0.490830 | 5.4:+70260075 | MS.gene038171:CDS |
| GATTTGTATTAAGTTGGAAA+AGG | 0.491914 | 5.4:+70258853 | MS.gene038171:CDS |
| CAACATAATGATTGGTTGAG+TGG | 0.494843 | 5.4:+70259682 | MS.gene038171:CDS |
| TCAAATCCAAACAATGGTGC+TGG | 0.496584 | 5.4:+70260498 | MS.gene038171:CDS |
| GCATGTTGGAAGCCTGCTAC+GGG | 0.500287 | 5.4:+70258617 | MS.gene038171:CDS |
| AATTGAAGCCACAGATGGAC+AGG | 0.502360 | 5.4:+70260325 | MS.gene038171:CDS |
| AACTTAATACAAATCTTGGC+AGG | 0.506782 | 5.4:-70258845 | None:intergenic |
| ATCTGTGTGTTCACGAGAGA+GGG | 0.507673 | 5.4:+70260209 | MS.gene038171:CDS |
| TGTAATGAGCATTGATGTAA+TGG | 0.508685 | 5.4:+70261869 | MS.gene038171:CDS |
| ACCACCTATGGCGTGTTGTA+GGG | 0.509756 | 5.4:-70259504 | None:intergenic |
| ATTCTTGTTTGCACAAGAGA+GGG | 0.511572 | 5.4:+70258761 | MS.gene038171:CDS |
| AATGGAGATGATGTTTATGC+AGG | 0.512599 | 5.4:+70261607 | MS.gene038171:CDS |
| AGAATCTGAAGATGCAACTA+AGG | 0.521210 | 5.4:+70260395 | MS.gene038171:CDS |
| CGGGTTAAATGTGAAGATCA+AGG | 0.521428 | 5.4:+70260537 | MS.gene038171:CDS |
| TATGCCATAAACACCACCTA+TGG | 0.521771 | 5.4:-70259516 | None:intergenic |
| TACTTATCATGTGTTGGAGG+AGG | 0.523219 | 5.4:+70260065 | MS.gene038171:CDS |
| ATCGAAATCAATGATGATGC+AGG | 0.524055 | 5.4:+70258965 | MS.gene038171:CDS |
| AACATAATGATTGGTTGAGT+GGG | 0.524704 | 5.4:+70259683 | MS.gene038171:CDS |
| GCAAACAAGAATTGCATAGC+AGG | 0.525492 | 5.4:-70258750 | None:intergenic |
| TGCACAAGAGAGGGGTCTCA+AGG | 0.531486 | 5.4:+70258770 | MS.gene038171:CDS |
| ATCTATGTAGTTGGAAGGAG+AGG | 0.532620 | 5.4:+70261812 | MS.gene038171:intron |
| AAGCATAAACTTGTCGATGA+AGG | 0.533024 | 5.4:-70259659 | None:intergenic |
| TCTTCACATTTAACCCGCAA+TGG | 0.533346 | 5.4:-70260531 | None:intergenic |
| AGCATGTTGGAAGCCTGCTA+CGG | 0.536953 | 5.4:+70258616 | MS.gene038171:CDS |
| TAGTATTCATGATGAAGGTA+TGG | 0.538379 | 5.4:+70258568 | MS.gene038171:CDS |
| CCCTCGTTGAATGTTGTCGA+GGG | 0.543640 | 5.4:+70260033 | MS.gene038171:CDS |
| TGTGATAGTATTCATGATGA+AGG | 0.546656 | 5.4:+70258563 | MS.gene038171:CDS |
| CAATTTAAGTGTAGTAAGGA+TGG | 0.555667 | 5.4:+70260438 | MS.gene038171:CDS |
| TTTATATCTATGTAGTTGGA+AGG | 0.557118 | 5.4:+70261807 | MS.gene038171:intron |
| AGGATCAAGTCTGCGATGGA+AGG | 0.560217 | 5.4:+70259586 | MS.gene038171:CDS |
| CCGCATTGTTGACAATAGAT+CGG | 0.561490 | 5.4:-70259009 | None:intergenic |
| TATCTGTGTGTTCACGAGAG+AGG | 0.565938 | 5.4:+70260208 | MS.gene038171:CDS |
| TAAAAGGATCAAGTCTGCGA+TGG | 0.569182 | 5.4:+70259582 | MS.gene038171:CDS |
| TTGTCAAACCTGTCCATCTG+TGG | 0.569297 | 5.4:-70260333 | None:intergenic |
| TCCCTCGTTGAATGTTGTCG+AGG | 0.574922 | 5.4:+70260032 | MS.gene038171:CDS |
| GTATGAAGAGCGTCATAGAT+GGG | 0.575034 | 5.4:+70259708 | MS.gene038171:CDS |
| CTGGAATTCACAGTCCATTG+CGG | 0.575404 | 5.4:+70260517 | MS.gene038171:CDS |
| TGGCATGAGTGTACTCACCT+TGG | 0.576261 | 5.4:-70259963 | None:intergenic |
| AATTCTTGTTTGCACAAGAG+AGG | 0.579543 | 5.4:+70258760 | MS.gene038171:CDS |
| CTATGTAGAATCATCTATTG+AGG | 0.583723 | 5.4:+70260729 | MS.gene038171:CDS |
| TCTATTGTCAACAATGCGGA+AGG | 0.586150 | 5.4:+70259013 | MS.gene038171:CDS |
| TCCATTGAAAAGCAATTCCA+AGG | 0.588119 | 5.4:+70259946 | MS.gene038171:CDS |
| AGTTGCATCTTCAGATTCTG+CGG | 0.590083 | 5.4:-70260391 | None:intergenic |
| TATTGTGACAGACCAATGTA+AGG | 0.594260 | 5.4:+70259453 | MS.gene038171:intron |
| TCTATTGAGGTTGTCAGTGG+TGG | 0.597149 | 5.4:+70260742 | MS.gene038171:CDS |
| ATGGAGATGATGTTTATGCA+GGG | 0.598515 | 5.4:+70261608 | MS.gene038171:CDS |
| CTGATGATGATGAAGCATGT+TGG | 0.601790 | 5.4:+70258603 | MS.gene038171:CDS |
| TCTTCTTTCAAGGCGTGCAG+TGG | 0.604982 | 5.4:+70261675 | MS.gene038171:CDS |
| TGTAGGGAAGACTAACTCAA+TGG | 0.612233 | 5.4:-70259488 | None:intergenic |
| TCTTCCCTACAACACGCCAT+AGG | 0.617216 | 5.4:+70259500 | MS.gene038171:CDS |
| GATGACTCAAATCCAAACAA+TGG | 0.622244 | 5.4:+70260492 | MS.gene038171:CDS |
| TTCTTGTTTGCACAAGAGAG+GGG | 0.624091 | 5.4:+70258762 | MS.gene038171:CDS |
| GCACAAGAGAGGGGTCTCAA+GGG | 0.625092 | 5.4:+70258771 | MS.gene038171:CDS |
| TCCCTACAACACGCCATAGG+TGG | 0.629132 | 5.4:+70259503 | MS.gene038171:CDS |
| GAGAGAATTGAAGCCACAGA+TGG | 0.631735 | 5.4:+70260320 | MS.gene038171:CDS |
| TCAATGATGATGCAGGAGTG+AGG | 0.638777 | 5.4:+70258972 | MS.gene038171:CDS |
| TCATCTATTGAGGTTGTCAG+TGG | 0.640747 | 5.4:+70260739 | MS.gene038171:CDS |
| CCCTCGACAACATTCAACGA+GGG | 0.645738 | 5.4:-70260033 | None:intergenic |
| CAGATAACACATGACAACAC+AGG | 0.666939 | 5.4:-70260191 | None:intergenic |
| CTATTGTCAACAATGCGGAA+GGG | 0.669349 | 5.4:+70259014 | MS.gene038171:CDS |
| TCGCGCTATTCACTTATACG+TGG | 0.671636 | 5.4:+70261842 | MS.gene038171:CDS |
| GTAGGAGTGCAATATTGGAA+TGG | 0.673951 | 5.4:+70260681 | MS.gene038171:intron |
| TGTAATGGAAGAAATCGTGA+AGG | 0.687566 | 5.4:+70261884 | MS.gene038171:CDS |
| CCGATCTATTGTCAACAATG+CGG | 0.696000 | 5.4:+70259009 | MS.gene038171:CDS |
| CATGTTGGAAGCCTGCTACG+GGG | 0.718729 | 5.4:+70258618 | MS.gene038171:CDS |
| ACCCTCGACAACATTCAACG+AGG | 0.768012 | 5.4:-70260034 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTATGTACTTTATT+AGG | + | chr5.4:70260930-70260949 | MS.gene038171:intron | 10.0% |
| !!! | TAGTTAACATAATTTTATAA+TGG | - | chr5.4:70260801-70260820 | None:intergenic | 10.0% |
| !! | ATTCAATATACATACATATA+TGG | - | chr5.4:70260636-70260655 | None:intergenic | 15.0% |
| !! | TAACATTTCTAATGAAAATA+AGG | + | chr5.4:70261056-70261075 | MS.gene038171:intron | 15.0% |
| !! | TTAACTAATGTTTAAATTCA+TGG | + | chr5.4:70260814-70260833 | MS.gene038171:intron | 15.0% |
| !!! | ATTTGTTTACTTTTGAAATA+GGG | + | chr5.4:70261416-70261435 | MS.gene038171:intron | 15.0% |
| !!! | CTTTGTAAGAAAATATTTTT+GGG | + | chr5.4:70259738-70259757 | MS.gene038171:CDS | 15.0% |
| !!! | TATTTGTTTACTTTTGAAAT+AGG | + | chr5.4:70261415-70261434 | MS.gene038171:intron | 15.0% |
| !! | CATATTTATATCTATGTAGT+TGG | + | chr5.4:70261803-70261822 | MS.gene038171:intron | 20.0% |
| !! | GATGGAAGAAAAATATTAAA+AGG | + | chr5.4:70260265-70260284 | MS.gene038171:CDS | 20.0% |
| !! | TAAATTGATGTAATGTTTCA+TGG | - | chr5.4:70260425-70260444 | None:intergenic | 20.0% |
| !!! | AAATATTTTCTTACAAAGGT+TGG | - | chr5.4:70259736-70259755 | None:intergenic | 20.0% |
| !!! | CCAAAAATATTTTCTTACAA+AGG | - | chr5.4:70259740-70259759 | None:intergenic | 20.0% |
| !!! | CCTTTGTAAGAAAATATTTT+TGG | + | chr5.4:70259737-70259756 | MS.gene038171:CDS | 20.0% |
| ! | AACAATGAACAGCATTTAAT+TGG | + | chr5.4:70259082-70259101 | MS.gene038171:CDS | 25.0% |
| ! | AATACAAAAACCACAAACAA+AGG | - | chr5.4:70261399-70261418 | None:intergenic | 25.0% |
| ! | ACATCAATTTAAGTGTAGTA+AGG | + | chr5.4:70260434-70260453 | MS.gene038171:CDS | 25.0% |
| ! | ACGAATACAGTGAATATAAA+AGG | + | chr5.4:70259566-70259585 | MS.gene038171:CDS | 25.0% |
| ! | ACTCATAGTTTATTGATAAG+TGG | + | chr5.4:70261231-70261250 | MS.gene038171:intron | 25.0% |
| ! | ATTGAGAATAGTTTATGTAC+TGG | + | chr5.4:70261012-70261031 | MS.gene038171:intron | 25.0% |
| ! | CAACTTGTGTTTAAATACTA+CGG | - | chr5.4:70261282-70261301 | None:intergenic | 25.0% |
| ! | CTCATAGTTTATTGATAAGT+GGG | + | chr5.4:70261232-70261251 | MS.gene038171:intron | 25.0% |
| ! | GATAACTTATGTAGTAGTTT+AGG | + | chr5.4:70260974-70260993 | MS.gene038171:intron | 25.0% |
| ! | TTATGCTTCAACATAATGAT+TGG | + | chr5.4:70259674-70259693 | MS.gene038171:CDS | 25.0% |
| ! | TTCCAACTTAATACAAATCT+TGG | - | chr5.4:70258852-70258871 | None:intergenic | 25.0% |
| ! | TTCCATATCAGTTACTAAAT+GGG | + | chr5.4:70261105-70261124 | MS.gene038171:intron | 25.0% |
| ! | TTTATATCTATGTAGTTGGA+AGG | + | chr5.4:70261807-70261826 | MS.gene038171:intron | 25.0% |
| !!! | AGAAGTATGTTTTAACAAGA+TGG | + | chr5.4:70260247-70260266 | MS.gene038171:CDS | 25.0% |
| !!! | CTACTCTTTTAAGTTTTTCA+TGG | + | chr5.4:70261529-70261548 | MS.gene038171:intron | 25.0% |
| !!! | GAGCTATTTTTCTAAAATGA+GGG | + | chr5.4:70259132-70259151 | MS.gene038171:intron | 25.0% |
| !!! | GATTTGTATTAAGTTGGAAA+AGG | + | chr5.4:70258853-70258872 | MS.gene038171:CDS | 25.0% |
| !!! | TGAGCTATTTTTCTAAAATG+AGG | + | chr5.4:70259131-70259150 | MS.gene038171:intron | 25.0% |
| !!! | TGATTTTGATGAACAACATT+TGG | + | chr5.4:70261715-70261734 | MS.gene038171:intron | 25.0% |
| !!! | TTTAAGTTTTTCATGGTACA+AGG | + | chr5.4:70261536-70261555 | MS.gene038171:intron | 25.0% |
| !!! | TTTTATTTGTCCAAATGTGT+AGG | + | chr5.4:70260663-70260682 | MS.gene038171:intron | 25.0% |
| AACTTAATACAAATCTTGGC+AGG | - | chr5.4:70258848-70258867 | None:intergenic | 30.0% | |
| AATAGATCGGAAAGTCTTAA+TGG | - | chr5.4:70258999-70259018 | None:intergenic | 30.0% | |
| AATCAACATTACTTGGATGT+GGG | + | chr5.4:70259347-70259366 | MS.gene038171:intron | 30.0% | |
| ACATCGAAAAAAAGAGATGA+TGG | + | chr5.4:70258722-70258741 | MS.gene038171:CDS | 30.0% | |
| AGCAGAAAAAGAATTTGAAG+CGG | + | chr5.4:70259879-70259898 | MS.gene038171:CDS | 30.0% | |
| AGCTTGAACTTCTTTGAATT+TGG | - | chr5.4:70259986-70260005 | None:intergenic | 30.0% | |
| ATTCCTCAAAACTCACTTAA+AGG | - | chr5.4:70261468-70261487 | None:intergenic | 30.0% | |
| ATTTAAGAATGCATGTCTCT+TGG | + | chr5.4:70261559-70261578 | MS.gene038171:intron | 30.0% | |
| CAACAGAAAATGATAGAACT+TGG | + | chr5.4:70261631-70261650 | MS.gene038171:CDS | 30.0% | |
| CAATTTAAGTGTAGTAAGGA+TGG | + | chr5.4:70260438-70260457 | MS.gene038171:CDS | 30.0% | |
| CAGCATTTAATTGGAAAAGA+AGG | + | chr5.4:70259091-70259110 | MS.gene038171:CDS | 30.0% | |
| CTATGCAAACTCTAATAGAA+AGG | + | chr5.4:70261304-70261323 | MS.gene038171:intron | 30.0% | |
| CTATGTAGAATCATCTATTG+AGG | + | chr5.4:70260729-70260748 | MS.gene038171:CDS | 30.0% | |
| CTTCAAAGTTGTGTTTAATC+AGG | + | chr5.4:70260119-70260138 | MS.gene038171:CDS | 30.0% | |
| CTTCCATATCAGTTACTAAA+TGG | + | chr5.4:70261104-70261123 | MS.gene038171:intron | 30.0% | |
| CTTGTTAAAACATACTTCTC+TGG | - | chr5.4:70260246-70260265 | None:intergenic | 30.0% | |
| GATAACATATGTACTAGTTG+AGG | + | chr5.4:70260952-70260971 | MS.gene038171:intron | 30.0% | |
| GGAGAATACATAATTTCTGA+AGG | - | chr5.4:70260615-70260634 | None:intergenic | 30.0% | |
| TAGTATTCATGATGAAGGTA+TGG | + | chr5.4:70258568-70258587 | MS.gene038171:CDS | 30.0% | |
| TGCCAAGATTTGTATTAAGT+TGG | + | chr5.4:70258847-70258866 | MS.gene038171:CDS | 30.0% | |
| TGTAATCATATAGCACCAAA+AGG | - | chr5.4:70261190-70261209 | None:intergenic | 30.0% | |
| TGTGATAGTATTCATGATGA+AGG | + | chr5.4:70258563-70258582 | MS.gene038171:CDS | 30.0% | |
| TTAAAGGACATCTTCTTTCA+AGG | + | chr5.4:70261665-70261684 | MS.gene038171:CDS | 30.0% | |
| TTAATTGGAAAAGAAGGTGA+TGG | + | chr5.4:70259097-70259116 | MS.gene038171:intron | 30.0% | |
| TTCAAAGGAAATGAAAATCG+TGG | + | chr5.4:70261138-70261157 | MS.gene038171:intron | 30.0% | |
| TTTCTTCTACGACATAGATT+TGG | + | chr5.4:70259168-70259187 | MS.gene038171:intron | 30.0% | |
| ! | AAAAAGTCTTGCATGGATTA+TGG | + | chr5.4:70261081-70261100 | MS.gene038171:intron | 30.0% |
| ! | AAAAGGCATGTCATACTTAT+TGG | - | chr5.4:70259296-70259315 | None:intergenic | 30.0% |
| ! | AACATAATGATTGGTTGAGT+GGG | + | chr5.4:70259683-70259702 | MS.gene038171:CDS | 30.0% |
| ! | AATCCTTTAAGTGAGTTTTG+AGG | + | chr5.4:70261462-70261481 | MS.gene038171:intron | 30.0% |
| ! | AGAGCTACTTATGAGTATTT+TGG | + | chr5.4:70259238-70259257 | MS.gene038171:intron | 30.0% |
| ! | TCATGTAAGGAATGTGTTTT+GGG | + | chr5.4:70259201-70259220 | MS.gene038171:intron | 30.0% |
| ! | TTCATGTAAGGAATGTGTTT+TGG | + | chr5.4:70259200-70259219 | MS.gene038171:intron | 30.0% |
| !! | AATAGTTTATGTACTGGTTG+AGG | + | chr5.4:70261018-70261037 | MS.gene038171:intron | 30.0% |
| !! | AGAGAGTATGCTTTGAAAAA+GGG | + | chr5.4:70258680-70258699 | MS.gene038171:CDS | 30.0% |
| !! | ATCATGTCTTTTTCGCAAAA+TGG | - | chr5.4:70259052-70259071 | None:intergenic | 30.0% |
| !! | TAGAGAGTATGCTTTGAAAA+AGG | + | chr5.4:70258679-70258698 | MS.gene038171:CDS | 30.0% |
| !! | TGTAATGAGCATTGATGTAA+TGG | + | chr5.4:70261869-70261888 | MS.gene038171:CDS | 30.0% |
| !! | TGTATTAAGTTGGAAAAGGA+TGG | + | chr5.4:70258857-70258876 | MS.gene038171:CDS | 30.0% |
| !! | TTTGGTGCTATATGATTACA+TGG | + | chr5.4:70261190-70261209 | MS.gene038171:intron | 30.0% |
| !!! | AGTTTTGAGGAATTGATTTC+TGG | + | chr5.4:70261475-70261494 | MS.gene038171:intron | 30.0% |
| !!! | ATCTCTTTTTTTCGATGTTC+TGG | - | chr5.4:70258720-70258739 | None:intergenic | 30.0% |
| !!! | ATGCTTTGAAAAAGGGTTTT+CGG | + | chr5.4:70258687-70258706 | MS.gene038171:CDS | 30.0% |
| !!! | CAACTGGTTTTGAAGATAAA+TGG | + | chr5.4:70259632-70259651 | MS.gene038171:CDS | 30.0% |
| !!! | GTAAGAAAATATTTTTGGGC+AGG | + | chr5.4:70259742-70259761 | MS.gene038171:CDS | 30.0% |
| AACATTCACAGCTGAAATCA+TGG | - | chr5.4:70260149-70260168 | None:intergenic | 35.0% | |
| AAGCATAAACTTGTCGATGA+AGG | - | chr5.4:70259662-70259681 | None:intergenic | 35.0% | |
| AATGGAGATGATGTTTATGC+AGG | + | chr5.4:70261607-70261626 | MS.gene038171:CDS | 35.0% | |
| ACACCTACAAATGTAGCAAA+AGG | - | chr5.4:70259313-70259332 | None:intergenic | 35.0% | |
| AGAATCTGAAGATGCAACTA+AGG | + | chr5.4:70260395-70260414 | MS.gene038171:CDS | 35.0% | |
| ATATTGCACTCCTACACATT+TGG | - | chr5.4:70260676-70260695 | None:intergenic | 35.0% | |
| ATGATAGAACTTGGACTAAC+TGG | + | chr5.4:70261640-70261659 | MS.gene038171:CDS | 35.0% | |
| ATGGAGATGATGTTTATGCA+GGG | + | chr5.4:70261608-70261627 | MS.gene038171:CDS | 35.0% | |
| CAAGTGGTAATCTTGTAAAC+TGG | + | chr5.4:70261255-70261274 | MS.gene038171:intron | 35.0% | |
| CAATATTCGATCACAGAGTT+TGG | - | chr5.4:70261371-70261390 | None:intergenic | 35.0% | |
| CAATCAACATTACTTGGATG+TGG | + | chr5.4:70259346-70259365 | MS.gene038171:intron | 35.0% | |
| CACCAAAAGGAAATAAACAC+CGG | - | chr5.4:70261177-70261196 | None:intergenic | 35.0% | |
| CATGGTCAATCAACATTACT+TGG | + | chr5.4:70259340-70259359 | MS.gene038171:intron | 35.0% | |
| GATGACTCAAATCCAAACAA+TGG | + | chr5.4:70260492-70260511 | MS.gene038171:CDS | 35.0% | |
| GATTACATGGTAACAAGTGT+TGG | + | chr5.4:70261203-70261222 | MS.gene038171:intron | 35.0% | |
| GGAAACATATGTACTAGTTC+AGG | + | chr5.4:70260886-70260905 | MS.gene038171:intron | 35.0% | |
| GTCCCATTTAGTAACTGATA+TGG | - | chr5.4:70261110-70261129 | None:intergenic | 35.0% | |
| TAAGGCAAAAAAGTCTTGCA+TGG | + | chr5.4:70261074-70261093 | MS.gene038171:intron | 35.0% | |
| TATGATACACACACAACAAC+TGG | + | chr5.4:70259616-70259635 | MS.gene038171:CDS | 35.0% | |
| TATTGTGACAGACCAATGTA+AGG | + | chr5.4:70259453-70259472 | MS.gene038171:intron | 35.0% | |
| TCCATTGAAAAGCAATTCCA+AGG | + | chr5.4:70259946-70259965 | MS.gene038171:CDS | 35.0% | |
| TTTATTGATAAGTGGGCAAG+TGG | + | chr5.4:70261239-70261258 | MS.gene038171:intron | 35.0% | |
| ! | AATGTGTAGGAGTGCAATAT+TGG | + | chr5.4:70260676-70260695 | MS.gene038171:intron | 35.0% |
| ! | AATTCTTGTTTGCACAAGAG+AGG | + | chr5.4:70258760-70258779 | MS.gene038171:CDS | 35.0% |
| ! | ATCGAAATCAATGATGATGC+AGG | + | chr5.4:70258965-70258984 | MS.gene038171:CDS | 35.0% |
| ! | ATGCCTTTTGCTACATTTGT+AGG | + | chr5.4:70259307-70259326 | MS.gene038171:intron | 35.0% |
| ! | ATTCTTGTTTGCACAAGAGA+GGG | + | chr5.4:70258761-70258780 | MS.gene038171:CDS | 35.0% |
| ! | CAACATAATGATTGGTTGAG+TGG | + | chr5.4:70259682-70259701 | MS.gene038171:CDS | 35.0% |
| ! | CATTTTGTACAGCCTTACAT+TGG | - | chr5.4:70259468-70259487 | None:intergenic | 35.0% |
| ! | CTTTGCTACTTATCATGTGT+TGG | + | chr5.4:70260059-70260078 | MS.gene038171:CDS | 35.0% |
| ! | GCAAGTCCATTTTCTTTGTA+GGG | - | chr5.4:70258931-70258950 | None:intergenic | 35.0% |
| ! | GTAATGTTGATTGACCATGA+TGG | - | chr5.4:70259339-70259358 | None:intergenic | 35.0% |
| ! | TATTGTGTCTCCTTTGTTTG+TGG | + | chr5.4:70261386-70261405 | MS.gene038171:intron | 35.0% |
| ! | TGCAAGTCCATTTTCTTTGT+AGG | - | chr5.4:70258932-70258951 | None:intergenic | 35.0% |
| ! | TGGATGACGATTTTCATGTA+AGG | + | chr5.4:70259188-70259207 | MS.gene038171:intron | 35.0% |
| ! | TGTAATGGAAGAAATCGTGA+AGG | + | chr5.4:70261884-70261903 | MS.gene038171:CDS | 35.0% |
| ! | TTGTGTGGCTTTTCAAATCA+TGG | + | chr5.4:70259398-70259417 | MS.gene038171:intron | 35.0% |
| !! | ACCTTGGAATTGCTTTTCAA+TGG | - | chr5.4:70259950-70259969 | None:intergenic | 35.0% |
| !! | ATCGTGAAGGTTCTAAAATC+AGG | + | chr5.4:70261897-70261916 | MS.gene038171:CDS | 35.0% |
| !!! | ACAATTTTTTGTCTTAGGCG+GGG | - | chr5.4:70258825-70258844 | None:intergenic | 35.0% |
| !!! | GACAATTTTTTGTCTTAGGC+GGG | - | chr5.4:70258826-70258845 | None:intergenic | 35.0% |
| !!! | GCAGGACAATTTTTTGTCTT+AGG | - | chr5.4:70258830-70258849 | None:intergenic | 35.0% |
| !!! | GGACAATTTTTTGTCTTAGG+CGG | - | chr5.4:70258827-70258846 | None:intergenic | 35.0% |
| !!! | TGAAGCGGATTTTAATTCAC+TGG | + | chr5.4:70259894-70259913 | MS.gene038171:CDS | 35.0% |
| AAGACACAGAGTCATTTGTG+TGG | + | chr5.4:70259383-70259402 | MS.gene038171:intron | 40.0% | |
| AGCATGCATGCTTTCTTTGA+TGG | + | chr5.4:70259790-70259809 | MS.gene038171:CDS | 40.0% | |
| AGTTGCATCTTCAGATTCTG+CGG | - | chr5.4:70260394-70260413 | None:intergenic | 40.0% | |
| AGTTGGAAAAGGATGGTTTG+TGG | + | chr5.4:70258864-70258883 | MS.gene038171:CDS | 40.0% | |
| ATCTATGTAGTTGGAAGGAG+AGG | + | chr5.4:70261812-70261831 | MS.gene038171:intron | 40.0% | |
| CAAGTGAAGTAATGACAGAC+AGG | + | chr5.4:70260568-70260587 | MS.gene038171:intron | 40.0% | |
| CAGATAACACATGACAACAC+AGG | - | chr5.4:70260194-70260213 | None:intergenic | 40.0% | |
| CCGATCTATTGTCAACAATG+CGG | + | chr5.4:70259009-70259028 | MS.gene038171:CDS | 40.0% | |
| CCGCATTGTTGACAATAGAT+CGG | - | chr5.4:70259012-70259031 | None:intergenic | 40.0% | |
| CGGGTTAAATGTGAAGATCA+AGG | + | chr5.4:70260537-70260556 | MS.gene038171:CDS | 40.0% | |
| CTATTGTCAACAATGCGGAA+GGG | + | chr5.4:70259014-70259033 | MS.gene038171:CDS | 40.0% | |
| CTGTCTGTCATTACTTCACT+TGG | - | chr5.4:70260570-70260589 | None:intergenic | 40.0% | |
| GCAAACAAGAATTGCATAGC+AGG | - | chr5.4:70258753-70258772 | None:intergenic | 40.0% | |
| GCATGCATGCTTTCTTTGAT+GGG | + | chr5.4:70259791-70259810 | MS.gene038171:CDS | 40.0% | |
| GCTTCATTGTATGCTTGGAA+AGG | + | chr5.4:70259420-70259439 | MS.gene038171:intron | 40.0% | |
| GGAAATGAAAATCGTGGTCA+CGG | + | chr5.4:70261144-70261163 | MS.gene038171:intron | 40.0% | |
| TAAAAGGATCAAGTCTGCGA+TGG | + | chr5.4:70259582-70259601 | MS.gene038171:CDS | 40.0% | |
| TACTTATCATGTGTTGGAGG+AGG | + | chr5.4:70260065-70260084 | MS.gene038171:CDS | 40.0% | |
| TATGCCATAAACACCACCTA+TGG | - | chr5.4:70259519-70259538 | None:intergenic | 40.0% | |
| TCAAATCCAAACAATGGTGC+TGG | + | chr5.4:70260498-70260517 | MS.gene038171:CDS | 40.0% | |
| TCATCTATTGAGGTTGTCAG+TGG | + | chr5.4:70260739-70260758 | MS.gene038171:CDS | 40.0% | |
| TCATGGCTTCATTGTATGCT+TGG | + | chr5.4:70259415-70259434 | MS.gene038171:intron | 40.0% | |
| TCTATTGTCAACAATGCGGA+AGG | + | chr5.4:70259013-70259032 | MS.gene038171:CDS | 40.0% | |
| TCTTCACATTTAACCCGCAA+TGG | - | chr5.4:70260534-70260553 | None:intergenic | 40.0% | |
| TGAATTCCAGCACCATTGTT+TGG | - | chr5.4:70260507-70260526 | None:intergenic | 40.0% | |
| TGTAGGGAAGACTAACTCAA+TGG | - | chr5.4:70259491-70259510 | None:intergenic | 40.0% | |
| TGTGTTGTGTTACAGATCTG+AGG | + | chr5.4:70260865-70260884 | MS.gene038171:intron | 40.0% | |
| TTTGTAGGTGTGAACCATCA+TGG | + | chr5.4:70259322-70259341 | MS.gene038171:intron | 40.0% | |
| ! | ATGGGACGAAGTTGTTTCAA+AGG | + | chr5.4:70261123-70261142 | MS.gene038171:intron | 40.0% |
| ! | CTGATGATGATGAAGCATGT+TGG | + | chr5.4:70258603-70258622 | MS.gene038171:CDS | 40.0% |
| ! | CTGTATTCGTTGAGCTTTTC+AGG | - | chr5.4:70259556-70259575 | None:intergenic | 40.0% |
| ! | GTAGGAGTGCAATATTGGAA+TGG | + | chr5.4:70260681-70260700 | MS.gene038171:intron | 40.0% |
| ! | TGCTACTTATCATGTGTTGG+AGG | + | chr5.4:70260062-70260081 | MS.gene038171:CDS | 40.0% |
| ! | TGTTCGTCGTTTGAGTTTAG+AGG | + | chr5.4:70260165-70260184 | MS.gene038171:CDS | 40.0% |
| ! | TTCTTGTTTGCACAAGAGAG+GGG | + | chr5.4:70258762-70258781 | MS.gene038171:CDS | 40.0% |
| !! | CTTGGACTAACTGGTCTTAA+AGG | + | chr5.4:70261649-70261668 | MS.gene038171:CDS | 40.0% |
| !! | CTTTGAAAAAGGGTTTTCGG+TGG | + | chr5.4:70258690-70258709 | MS.gene038171:CDS | 40.0% |
| !! | GTATGAAGAGCGTCATAGAT+GGG | + | chr5.4:70259708-70259727 | MS.gene038171:CDS | 40.0% |
| !! | TGTATGAAGAGCGTCATAGA+TGG | + | chr5.4:70259707-70259726 | MS.gene038171:CDS | 40.0% |
| !!! | CAATTTTTTGTCTTAGGCGG+GGG | - | chr5.4:70258824-70258843 | None:intergenic | 40.0% |
| AAAATCGTGGTCACGGAGAA+AGG | + | chr5.4:70261151-70261170 | MS.gene038171:intron | 45.0% | |
| AATTGAAGCCACAGATGGAC+AGG | + | chr5.4:70260325-70260344 | MS.gene038171:CDS | 45.0% | |
| ATCTGTGTGTTCACGAGAGA+GGG | + | chr5.4:70260209-70260228 | MS.gene038171:CDS | 45.0% | |
| CATCATCTCCATTTCCTGCA+TGG | - | chr5.4:70261600-70261619 | None:intergenic | 45.0% | |
| CTGGAATTCACAGTCCATTG+CGG | + | chr5.4:70260517-70260536 | MS.gene038171:CDS | 45.0% | |
| GACCAGCCCTACAAAGAAAA+TGG | + | chr5.4:70258922-70258941 | MS.gene038171:CDS | 45.0% | |
| GAGAGAATTGAAGCCACAGA+TGG | + | chr5.4:70260320-70260339 | MS.gene038171:CDS | 45.0% | |
| TATCTGTGTGTTCACGAGAG+AGG | + | chr5.4:70260208-70260227 | MS.gene038171:CDS | 45.0% | |
| TCGCGCTATTCACTTATACG+TGG | + | chr5.4:70261842-70261861 | MS.gene038171:CDS | 45.0% | |
| TCTATTGAGGTTGTCAGTGG+TGG | + | chr5.4:70260742-70260761 | MS.gene038171:CDS | 45.0% | |
| TGGAATTCACAGTCCATTGC+GGG | + | chr5.4:70260518-70260537 | MS.gene038171:CDS | 45.0% | |
| TTGTCAAACCTGTCCATCTG+TGG | - | chr5.4:70260336-70260355 | None:intergenic | 45.0% | |
| ! | GGCCGGTGTTTATTTCCTTT+TGG | + | chr5.4:70261172-70261191 | MS.gene038171:intron | 45.0% |
| ! | GTCCATTTTCTTTGTAGGGC+TGG | - | chr5.4:70258927-70258946 | None:intergenic | 45.0% |
| ! | TCAATGATGATGCAGGAGTG+AGG | + | chr5.4:70258972-70258991 | MS.gene038171:CDS | 45.0% |
| ! | TGGAAAAGAAGGTGATGGCA+AGG | + | chr5.4:70259102-70259121 | MS.gene038171:intron | 45.0% |
| !! | CGAGGGAGCACAATTCATTT+TGG | - | chr5.4:70260019-70260038 | None:intergenic | 45.0% |
| ACCACCTATGGCGTGTTGTA+GGG | - | chr5.4:70259507-70259526 | None:intergenic | 50.0% | |
| ACCCTCGACAACATTCAACG+AGG | - | chr5.4:70260037-70260056 | None:intergenic | 50.0% | |
| AGCATGTTGGAAGCCTGCTA+CGG | + | chr5.4:70258616-70258635 | MS.gene038171:CDS | 50.0% | |
| AGGATCAAGTCTGCGATGGA+AGG | + | chr5.4:70259586-70259605 | MS.gene038171:CDS | 50.0% | |
| ATTGAGGTTGTCAGTGGTGG+TGG | + | chr5.4:70260745-70260764 | MS.gene038171:CDS | 50.0% | |
| CACGCCATAGGTGGTGTTTA+TGG | + | chr5.4:70259512-70259531 | MS.gene038171:CDS | 50.0% | |
| CCCTCGACAACATTCAACGA+GGG | - | chr5.4:70260036-70260055 | None:intergenic | 50.0% | |
| CCCTCGTTGAATGTTGTCGA+GGG | + | chr5.4:70260033-70260052 | MS.gene038171:CDS | 50.0% | |
| CTACGTCTTCGACTGCAAAG+TGG | - | chr5.4:70261338-70261357 | None:intergenic | 50.0% | |
| GGTCTGTCACAATACCCACA+GGG | - | chr5.4:70259447-70259466 | None:intergenic | 50.0% | |
| GTCTGTCACAATACCCACAG+GGG | - | chr5.4:70259446-70259465 | None:intergenic | 50.0% | |
| GTGTTGGAGGAGGTTGTAGT+TGG | + | chr5.4:70260075-70260094 | MS.gene038171:CDS | 50.0% | |
| TCCATTTCCTGCATGGACCA+TGG | - | chr5.4:70261593-70261612 | None:intergenic | 50.0% | |
| TCCCTCGTTGAATGTTGTCG+AGG | + | chr5.4:70260032-70260051 | MS.gene038171:CDS | 50.0% | |
| TCTTCCCTACAACACGCCAT+AGG | + | chr5.4:70259500-70259519 | MS.gene038171:CDS | 50.0% | |
| TCTTCTTTCAAGGCGTGCAG+TGG | + | chr5.4:70261675-70261694 | MS.gene038171:CDS | 50.0% | |
| TGGCATGAGTGTACTCACCT+TGG | - | chr5.4:70259966-70259985 | None:intergenic | 50.0% | |
| TGGTCTGTCACAATACCCAC+AGG | - | chr5.4:70259448-70259467 | None:intergenic | 50.0% | |
| TTGGAGGAGGTTGTAGTTGG+AGG | + | chr5.4:70260078-70260097 | MS.gene038171:CDS | 50.0% | |
| !! | GGGGGTGTCTTTAACGTACA+CGG | - | chr5.4:70258806-70258825 | None:intergenic | 50.0% |
| !! | TGTCAGTGGTGGTGGTTTGT+TGG | + | chr5.4:70260753-70260772 | MS.gene038171:intron | 50.0% |
| ATGCTTGGAAAGGCCCCTGT+GGG | + | chr5.4:70259430-70259449 | MS.gene038171:intron | 55.0% | |
| CACCACCTATGGCGTGTTGT+AGG | - | chr5.4:70259508-70259527 | None:intergenic | 55.0% | |
| CATGTTGGAAGCCTGCTACG+GGG | + | chr5.4:70258618-70258637 | MS.gene038171:CDS | 55.0% | |
| GAAAAACGCATCCCCGTAGC+AGG | - | chr5.4:70258632-70258651 | None:intergenic | 55.0% | |
| GCACAAGAGAGGGGTCTCAA+GGG | + | chr5.4:70258771-70258790 | MS.gene038171:CDS | 55.0% | |
| GCATGTTGGAAGCCTGCTAC+GGG | + | chr5.4:70258617-70258636 | MS.gene038171:CDS | 55.0% | |
| GCCATGGTCCATGCAGGAAA+TGG | + | chr5.4:70261589-70261608 | MS.gene038171:intron | 55.0% | |
| TATGCTTGGAAAGGCCCCTG+TGG | + | chr5.4:70259429-70259448 | MS.gene038171:intron | 55.0% | |
| TCCCTACAACACGCCATAGG+TGG | + | chr5.4:70259503-70259522 | MS.gene038171:CDS | 55.0% | |
| TCCTGCATGGACCATGGCTA+AGG | - | chr5.4:70261587-70261606 | None:intergenic | 55.0% | |
| TGCACAAGAGAGGGGTCTCA+AGG | + | chr5.4:70258770-70258789 | MS.gene038171:CDS | 55.0% | |
| !! | GTCTCTTGGTGCCTTAGCCA+TGG | + | chr5.4:70261573-70261592 | MS.gene038171:intron | 55.0% |
| GCCTTAGCCATGGTCCATGC+AGG | + | chr5.4:70261583-70261602 | MS.gene038171:intron | 60.0% | |
| TCGTGGTCACGGAGAAAGGC+CGG | + | chr5.4:70261155-70261174 | MS.gene038171:intron | 60.0% | |
| ! | CTTGGATGTGGGCTGCTCTC+AGG | + | chr5.4:70259358-70259377 | MS.gene038171:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 70258536 | 70261932 | 70258536 | ID=MS.gene038171 |
| chr5.4 | mRNA | 70258536 | 70261932 | 70258536 | ID=MS.gene038171.t1;Parent=MS.gene038171 |
| chr5.4 | exon | 70258536 | 70259112 | 70258536 | ID=MS.gene038171.t1.exon1;Parent=MS.gene038171.t1 |
| chr5.4 | CDS | 70258536 | 70259112 | 70258536 | ID=cds.MS.gene038171.t1;Parent=MS.gene038171.t1 |
| chr5.4 | exon | 70259464 | 70260575 | 70259464 | ID=MS.gene038171.t1.exon2;Parent=MS.gene038171.t1 |
| chr5.4 | CDS | 70259464 | 70260575 | 70259464 | ID=cds.MS.gene038171.t1;Parent=MS.gene038171.t1 |
| chr5.4 | exon | 70260685 | 70260766 | 70260685 | ID=MS.gene038171.t1.exon3;Parent=MS.gene038171.t1 |
| chr5.4 | CDS | 70260685 | 70260766 | 70260685 | ID=cds.MS.gene038171.t1;Parent=MS.gene038171.t1 |
| chr5.4 | exon | 70261605 | 70261696 | 70261605 | ID=MS.gene038171.t1.exon4;Parent=MS.gene038171.t1 |
| chr5.4 | CDS | 70261605 | 70261696 | 70261605 | ID=cds.MS.gene038171.t1;Parent=MS.gene038171.t1 |
| chr5.4 | exon | 70261822 | 70261932 | 70261822 | ID=MS.gene038171.t1.exon5;Parent=MS.gene038171.t1 |
| chr5.4 | CDS | 70261822 | 70261932 | 70261822 | ID=cds.MS.gene038171.t1;Parent=MS.gene038171.t1 |
| Gene Sequence |
| Protein sequence |
