Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038208.t1 | XP_003617278.1 | 98.3 | 544 | 9 | 0 | 1 | 544 | 1 | 544 | 3.00E-281 | 977.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038208.t1 | F4HY56 | 32.0 | 228 | 102 | 6 | 20 | 247 | 41 | 215 | 6.7e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038208.t1 | G7K365 | 98.3 | 544 | 9 | 0 | 1 | 544 | 1 | 544 | 2.2e-281 | 977.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene038208.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038208.t1 | MTR_5g089870 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1109 |
| MS.gene038208.t1 | MTR_3g045830 | 56.080 | 551 | 189 | 8 | 1 | 543 | 1 | 506 | 0.0 | 546 |
| MS.gene038208.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.29e-13 | 72.8 |
| MS.gene038208.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.33e-13 | 72.8 |
| MS.gene038208.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 20 | 75 | 33 | 88 | 4.38e-13 | 72.8 |
| MS.gene038208.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.54e-12 | 71.2 |
| MS.gene038208.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 20 | 77 | 42 | 99 | 1.57e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038208.t1 | AT4G03250 | 39.432 | 563 | 261 | 16 | 3 | 544 | 4 | 507 | 2.07e-83 | 268 |
| MS.gene038208.t1 | AT1G28420 | 55.357 | 56 | 25 | 0 | 20 | 75 | 41 | 96 | 1.79e-14 | 77.4 |
Find 122 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTACAGGATGAGTTGTTTA+AGG | 0.209194 | 5.4:+70994168 | MS.gene038208:intron |
| ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5.4:-70993903 | None:intergenic |
| TTGACAGAAAAGCAAGTTTC+TGG | 0.241531 | 5.4:+70990916 | MS.gene038208:CDS |
| TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5.4:-70993966 | None:intergenic |
| GATTGCACCTTTCGGATTTA+AGG | 0.253961 | 5.4:-70991313 | None:intergenic |
| CCGTTGCTCTCAACCTCTTT+AGG | 0.296329 | 5.4:-70991102 | None:intergenic |
| AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5.4:+70994048 | MS.gene038208:CDS |
| CAGGATCGTGGCAGTGGACT+TGG | 0.326571 | 5.4:+70991030 | MS.gene038208:CDS |
| GTTGCATGATGTTCATGTTC+AGG | 0.329068 | 5.4:+70993605 | MS.gene038208:CDS |
| CTGAAAAGTTTGTCTATGTT+TGG | 0.340704 | 5.4:-70993658 | None:intergenic |
| CAAAACGCCTGCACAGCTTA+AGG | 0.344150 | 5.4:+70990741 | MS.gene038208:CDS |
| ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5.4:+70991399 | MS.gene038208:CDS |
| CCCATGTTGATTGCACCTTT+CGG | 0.370330 | 5.4:-70991321 | None:intergenic |
| CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5.4:-70993569 | None:intergenic |
| GGAACCTGTTTCATATTGTA+TGG | 0.374331 | 5.4:-70994413 | None:intergenic |
| CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5.4:-70993898 | None:intergenic |
| AAGAAGAAGCAAATGCTAAT+AGG | 0.387744 | 5.4:+70990980 | MS.gene038208:CDS |
| GCATGGTGATTATAAGTATC+TGG | 0.393909 | 5.4:+70991077 | MS.gene038208:CDS |
| CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5.4:-70991494 | None:intergenic |
| GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5.4:+70991413 | MS.gene038208:CDS |
| CAATCAATCCAGTGAGGAAC+TGG | 0.405732 | 5.4:-70995196 | None:intergenic |
| TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5.4:-70993568 | None:intergenic |
| GCCTGCACAGCTTAAGGGCT+TGG | 0.407132 | 5.4:+70990747 | MS.gene038208:CDS |
| TATCGTGATGCAGGTGGAGC+AGG | 0.408220 | 5.4:+70994214 | MS.gene038208:CDS |
| CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5.4:+70991495 | MS.gene038208:CDS |
| AGAGTCTTCATACAAATCTA+AGG | 0.411845 | 5.4:-70993715 | None:intergenic |
| AAAACGCCTGCACAGCTTAA+GGG | 0.413028 | 5.4:+70990742 | MS.gene038208:CDS |
| GCTCACCTCTGAGCTTTCCT+TGG | 0.413393 | 5.4:-70994452 | None:intergenic |
| CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5.4:-70991270 | None:intergenic |
| CTTGGTTCTATCTCAGCAAC+AGG | 0.414880 | 5.4:-70994434 | None:intergenic |
| ATTGCACCTTTCGGATTTAA+GGG | 0.420903 | 5.4:-70991312 | None:intergenic |
| TCAACCATACAATATGAAAC+AGG | 0.427437 | 5.4:+70994409 | MS.gene038208:CDS |
| CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5.4:-70991029 | None:intergenic |
| GATGCTTTCAAATGAGACTA+TGG | 0.432046 | 5.4:+70994237 | MS.gene038208:CDS |
| GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5.4:-70993057 | None:intergenic |
| GTACAGGATGAGTTGTTTAA+GGG | 0.451788 | 5.4:+70994169 | MS.gene038208:intron |
| CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5.4:+70991432 | MS.gene038208:CDS |
| GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5.4:-70991263 | None:intergenic |
| CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5.4:+70993579 | MS.gene038208:CDS |
| TTTGTCTATGTTTGGTACCA+TGG | 0.463442 | 5.4:-70993650 | None:intergenic |
| TCAAATGCCCCTGGAGGAAG+TGG | 0.466413 | 5.4:-70991468 | None:intergenic |
| AGGAAGTCTGCATGTTTGAC+TGG | 0.467186 | 5.4:-70993855 | None:intergenic |
| TCCAAGCCCTTAAGCTGTGC+AGG | 0.467500 | 5.4:-70990748 | None:intergenic |
| GGATGCCAAGCGCGGTGTTG+AGG | 0.467670 | 5.4:+70993779 | MS.gene038208:CDS |
| TTTCTTCATAGCGATCACTA+TGG | 0.468844 | 5.4:-70993827 | None:intergenic |
| AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5.4:-70991285 | None:intergenic |
| GCTAATTTCAATTCCTCTGT+CGG | 0.480787 | 5.4:-70990874 | None:intergenic |
| TGACAGAAAAGCAAGTTTCT+GGG | 0.481471 | 5.4:+70990917 | MS.gene038208:CDS |
| TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5.4:-70993070 | None:intergenic |
| GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5.4:+70991024 | MS.gene038208:CDS |
| GATTTGTATGAAGACTCTAC+TGG | 0.484462 | 5.4:+70993720 | MS.gene038208:CDS |
| GATGCCAAGCGCGGTGTTGA+GGG | 0.484892 | 5.4:+70993780 | MS.gene038208:CDS |
| GAATTTGATCCACTTCCTCC+AGG | 0.485743 | 5.4:+70991459 | MS.gene038208:CDS |
| GTTTGGCATTCAAATGCCCC+TGG | 0.490524 | 5.4:-70991477 | None:intergenic |
| TGCTGATACCAGTTCCTCAC+TGG | 0.497663 | 5.4:+70995188 | MS.gene038208:CDS |
| TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5.4:+70993563 | MS.gene038208:CDS |
| AACATGGGATATAAACCATC+GGG | 0.519479 | 5.4:+70991336 | MS.gene038208:CDS |
| CATACCCTCAACACCGCGCT+TGG | 0.522849 | 5.4:-70993784 | None:intergenic |
| TCGTTCAAGTGGTGTCATCC+AGG | 0.523322 | 5.4:+70991011 | MS.gene038208:CDS |
| TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5.4:-70993699 | None:intergenic |
| TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5.4:+70991182 | MS.gene038208:CDS |
| GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5.4:-70994005 | None:intergenic |
| ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5.4:+70991353 | MS.gene038208:CDS |
| GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5.4:-70993052 | None:intergenic |
| CATCACTAAGAATCATAAGA+AGG | 0.545103 | 5.4:+70993758 | MS.gene038208:CDS |
| GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5.4:+70994058 | MS.gene038208:CDS |
| AGGATCGTGGCAGTGGACTT+GGG | 0.551473 | 5.4:+70991031 | MS.gene038208:CDS |
| AAATTCTTCACAACAATGGA+AGG | 0.554885 | 5.4:+70989975 | None:intergenic |
| TAAGTATCTGGATCCTAAAG+AGG | 0.555927 | 5.4:+70991089 | MS.gene038208:CDS |
| GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5.4:+70991420 | MS.gene038208:CDS |
| CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5.4:-70994019 | None:intergenic |
| TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5.4:-70991255 | None:intergenic |
| CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5.4:+70994019 | MS.gene038208:CDS |
| TTCACTTTCAAATATCCCGA+TGG | 0.569594 | 5.4:-70991351 | None:intergenic |
| ATCGTGATGCAGGTGGAGCA+GGG | 0.576443 | 5.4:+70994215 | MS.gene038208:CDS |
| CAACATGGGATATAAACCAT+CGG | 0.579239 | 5.4:+70991335 | MS.gene038208:CDS |
| AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5.4:+70991260 | MS.gene038208:CDS |
| TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5.4:+70991320 | MS.gene038208:CDS |
| GATTCATATTATACTAAACA+TGG | 0.583805 | 5.4:+70993543 | MS.gene038208:CDS |
| AATTTGATCCACTTCCTCCA+GGG | 0.587189 | 5.4:+70991460 | MS.gene038208:CDS |
| CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5.4:-70993115 | None:intergenic |
| TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5.4:+70993567 | MS.gene038208:CDS |
| AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5.4:+70994011 | MS.gene038208:CDS |
| CAAGATAAGAAAGCTTTCCA+TGG | 0.592693 | 5.4:+70993633 | MS.gene038208:CDS |
| TACAGGATGAGTTGTTTAAG+GGG | 0.596582 | 5.4:+70994170 | MS.gene038208:intron |
| TCTGTTGCAGATATGACGTA+TGG | 0.596987 | 5.4:+70991144 | MS.gene038208:CDS |
| TCGGGATATTTGAAAGTGAA+GGG | 0.597023 | 5.4:+70991354 | MS.gene038208:CDS |
| AGTCTGCATGTTTGACTGGG+AGG | 0.604885 | 5.4:-70993851 | None:intergenic |
| TCGTGCGGAAGCAGTAAGCA+TGG | 0.609438 | 5.4:+70991060 | MS.gene038208:CDS |
| ATTTGATCCACTTCCTCCAG+GGG | 0.610594 | 5.4:+70991461 | MS.gene038208:CDS |
| CAGATATGACGTATGGACGC+AGG | 0.612034 | 5.4:+70991151 | MS.gene038208:CDS |
| TCATCCTCGCTAAAGCTAGA+CGG | 0.613881 | 5.4:-70995162 | None:intergenic |
| CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5.4:+70994036 | MS.gene038208:CDS |
| TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5.4:+70993097 | MS.gene038208:CDS |
| GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5.4:-70993688 | None:intergenic |
| AAGCAATATCGTGATGCAGG+TGG | 0.619203 | 5.4:+70994208 | MS.gene038208:CDS |
| TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5.4:-70991444 | None:intergenic |
| CAAGAACGTATGTATCCTCA+AGG | 0.624443 | 5.4:+70991240 | MS.gene038208:CDS |
| CCTAAAGAGGTTGAGAGCAA+CGG | 0.628717 | 5.4:+70991102 | MS.gene038208:CDS |
| ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5.4:+70990885 | MS.gene038208:CDS |
| GGAAGTCTGCATGTTTGACT+GGG | 0.632535 | 5.4:-70993854 | None:intergenic |
| CAGAAAAGCAAGTTTCTGGG+TGG | 0.634139 | 5.4:+70990920 | MS.gene038208:CDS |
| CTTCCACCCTTAAATCCGAA+AGG | 0.637927 | 5.4:+70991306 | MS.gene038208:CDS |
| AGTGGTGTCATCCAGGATCG+TGG | 0.644469 | 5.4:+70991018 | MS.gene038208:CDS |
| AGGCGACAAGATCGTTCAAG+TGG | 0.645824 | 5.4:+70991000 | MS.gene038208:CDS |
| CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5.4:+70991403 | MS.gene038208:CDS |
| CAGACAAATCACGATTGTAG+AGG | 0.656746 | 5.4:-70991125 | None:intergenic |
| TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5.4:+70994035 | MS.gene038208:CDS |
| CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5.4:+70991321 | MS.gene038208:CDS |
| CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5.4:+70993898 | MS.gene038208:CDS |
| TGGCATTCAAATGCCCCTGG+AGG | 0.673262 | 5.4:-70991474 | None:intergenic |
| GCACCTTTCGGATTTAAGGG+TGG | 0.674376 | 5.4:-70991309 | None:intergenic |
| TAGAACCAAGGAAAGCTCAG+AGG | 0.675746 | 5.4:+70994447 | MS.gene038208:CDS |
| CATAAGAAGGATGCCAAGCG+CGG | 0.680844 | 5.4:+70993771 | MS.gene038208:CDS |
| TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5.4:+70993961 | MS.gene038208:CDS |
| GGACTTGGGCAAGATTCGTG+CGG | 0.690813 | 5.4:+70991045 | MS.gene038208:CDS |
| ACAGGATGAGTTGTTTAAGG+GGG | 0.696588 | 5.4:+70994171 | MS.gene038208:intron |
| AGAGCACAAATATCCGACAG+AGG | 0.722247 | 5.4:+70990861 | MS.gene038208:intron |
| GATGCCGTCTAGCTTTAGCG+AGG | 0.724075 | 5.4:+70995158 | MS.gene038208:CDS |
| AGAAGAAAATAAAGTCTCCG+CGG | 0.726053 | 5.4:+70990696 | MS.gene038208:CDS |
| ACAAAACAATCAATCCAGTG+AGG | 0.737591 | 5.4:-70995202 | None:intergenic |
| CTGTTGCTGAGATAGAACCA+AGG | 0.743299 | 5.4:+70994435 | MS.gene038208:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTATAATTGAAATT+AGG | + | chr5.4:70990242-70990261 | MS.gene038208:intron | 10.0% |
| !!! | TTTTTGTTGTTATAATTATT+TGG | + | chr5.4:70990431-70990450 | MS.gene038208:intron | 10.0% |
| !! | AACAAAAAAAGATCTAAATT+AGG | - | chr5.4:70990303-70990322 | None:intergenic | 15.0% |
| !! | CATAAAATAATTTAAATGTC+TGG | - | chr5.4:70991983-70992002 | None:intergenic | 15.0% |
| !!! | GTTAATATATTTTATCCAAA+GGG | + | chr5.4:70990801-70990820 | MS.gene038208:intron | 15.0% |
| !!! | TGTTAATATATTTTATCCAA+AGG | + | chr5.4:70990800-70990819 | MS.gene038208:intron | 15.0% |
| !!! | TTAATTAGTTTCCTTAAAAT+CGG | + | chr5.4:70992398-70992417 | MS.gene038208:intron | 15.0% |
| !!! | TTTAATTTTTCAAAACTGTA+AGG | + | chr5.4:70992062-70992081 | MS.gene038208:intron | 15.0% |
| !! | AATTAAATGACTTGAAACAA+TGG | - | chr5.4:70993361-70993380 | None:intergenic | 20.0% |
| !! | AATTACTATGAGTACTTATA+TGG | - | chr5.4:70993423-70993442 | None:intergenic | 20.0% |
| !! | AGTTGTATAACATAAATGAA+TGG | - | chr5.4:70992309-70992328 | None:intergenic | 20.0% |
| !! | ATGATGCTATTCTTAAAATT+TGG | + | chr5.4:70992558-70992577 | MS.gene038208:intron | 20.0% |
| !! | ATTCATTTATGTTATACAAC+TGG | + | chr5.4:70992308-70992327 | MS.gene038208:intron | 20.0% |
| !! | CTTATCAAGTTAATTATCAT+TGG | - | chr5.4:70991872-70991891 | None:intergenic | 20.0% |
| !! | GATTCATATTATACTAAACA+TGG | + | chr5.4:70993543-70993562 | MS.gene038208:CDS | 20.0% |
| !! | TTATGAAAAATTCTCAGATA+TGG | + | chr5.4:70990504-70990523 | MS.gene038208:intron | 20.0% |
| !! | TTTATTCTTATTAGCGATTT+GGG | + | chr5.4:70990019-70990038 | MS.gene038208:intron | 20.0% |
| !! | TTTCACATAACTAATAGAAT+GGG | - | chr5.4:70991556-70991575 | None:intergenic | 20.0% |
| !!! | CAATGATAATTAACTTGATA+AGG | + | chr5.4:70991870-70991889 | MS.gene038208:intron | 20.0% |
| !!! | GAAATATTTCTAGAAAAACA+TGG | - | chr5.4:70992904-70992923 | None:intergenic | 20.0% |
| !!! | TGTTTTCATAGTTATATTGT+AGG | - | chr5.4:70993878-70993897 | None:intergenic | 20.0% |
| !!! | TTCTTTTCACATATGATTTA+GGG | + | chr5.4:70991929-70991948 | MS.gene038208:intron | 20.0% |
| !!! | TTTTATTCTTATTAGCGATT+TGG | + | chr5.4:70990018-70990037 | MS.gene038208:intron | 20.0% |
| ! | AAAATGAGAATGCATTAGAA+AGG | - | chr5.4:70993142-70993161 | None:intergenic | 25.0% |
| ! | AAAATTAAATGCAGCTGAAA+TGG | + | chr5.4:70993243-70993262 | MS.gene038208:intron | 25.0% |
| ! | AATGTTCAATAGTAAGCTTT+CGG | + | chr5.4:70994596-70994615 | MS.gene038208:intron | 25.0% |
| ! | ACATAAAGGACTTAAATTTG+GGG | + | chr5.4:70990163-70990182 | MS.gene038208:intron | 25.0% |
| ! | ACATATAAATAGACAGATGT+AGG | + | chr5.4:70992182-70992201 | MS.gene038208:intron | 25.0% |
| ! | AGAATAATAATCTTTGTGCA+AGG | + | chr5.4:70992833-70992852 | MS.gene038208:intron | 25.0% |
| ! | AGAGCAAAAATAAGTTATCT+TGG | - | chr5.4:70992879-70992898 | None:intergenic | 25.0% |
| ! | AGGTATTAGCATTAGAATAT+AGG | + | chr5.4:70992455-70992474 | MS.gene038208:intron | 25.0% |
| ! | AGTTAAAGAAATAAGCTTTC+TGG | + | chr5.4:70990478-70990497 | MS.gene038208:intron | 25.0% |
| ! | ATAAGATATACAACAATCAC+AGG | - | chr5.4:70990588-70990607 | None:intergenic | 25.0% |
| ! | ATCTTCATTAAAGAGGAAAA+AGG | - | chr5.4:70994672-70994691 | None:intergenic | 25.0% |
| ! | CAATTTATTCTGCTTACAAA+TGG | + | chr5.4:70994118-70994137 | MS.gene038208:intron | 25.0% |
| ! | CATCACATTGTAAAATTGTT+AGG | + | chr5.4:70991648-70991667 | MS.gene038208:intron | 25.0% |
| ! | GAAATATTTCATTGTAGCTA+AGG | + | chr5.4:70992914-70992933 | MS.gene038208:intron | 25.0% |
| ! | GAATTAGTATTTGTTTGATC+TGG | + | chr5.4:70992138-70992157 | MS.gene038208:intron | 25.0% |
| ! | GACATAAAGGACTTAAATTT+GGG | + | chr5.4:70990162-70990181 | MS.gene038208:intron | 25.0% |
| ! | GTTGAAATTGAATCAATGTT+AGG | + | chr5.4:70990080-70990099 | MS.gene038208:intron | 25.0% |
| ! | GTTTCACATAACTAATAGAA+TGG | - | chr5.4:70991557-70991576 | None:intergenic | 25.0% |
| ! | TAACATAAATGAATGGTCAA+AGG | - | chr5.4:70992302-70992321 | None:intergenic | 25.0% |
| ! | TAATAAATTGAGCTGCAAAA+AGG | - | chr5.4:70992099-70992118 | None:intergenic | 25.0% |
| ! | TCTTAGTATTAATACTACCA+AGG | + | chr5.4:70991846-70991865 | MS.gene038208:intron | 25.0% |
| ! | TTAGGTTAGAATCTACAATA+GGG | + | chr5.4:70990098-70990117 | MS.gene038208:intron | 25.0% |
| ! | TTCTTACCTTTGTATTGTTA+TGG | + | chr5.4:70993015-70993034 | MS.gene038208:intron | 25.0% |
| !! | ATCTTTTATCCTTTAACCTT+CGG | - | chr5.4:70990954-70990973 | None:intergenic | 25.0% |
| !! | CTTCTTTTCACATATGATTT+AGG | + | chr5.4:70991928-70991947 | MS.gene038208:intron | 25.0% |
| !! | GTGAAACTAAAATGTTGTTT+AGG | + | chr5.4:70991570-70991589 | MS.gene038208:intron | 25.0% |
| !! | TTGCAAGAGAAACTTTTAAA+CGG | + | chr5.4:70993379-70993398 | MS.gene038208:intron | 25.0% |
| !! | TTTATCTAGTCCATATTTTG+AGG | + | chr5.4:70992365-70992384 | MS.gene038208:intron | 25.0% |
| !!! | TCTTCTTACTTAGTTTTTAC+TGG | + | chr5.4:70995076-70995095 | MS.gene038208:intron | 25.0% |
| !!! | TTATCTAGTCCATATTTTGA+GGG | + | chr5.4:70992366-70992385 | MS.gene038208:intron | 25.0% |
| AACAATATGGCTGATCATTT+AGG | + | chr5.4:70991605-70991624 | MS.gene038208:intron | 30.0% | |
| AACCCAAAAAGGTAGTTTAA+GGG | + | chr5.4:70992719-70992738 | MS.gene038208:intron | 30.0% | |
| AACTTCTTACCTTTGCTTAA+AGG | + | chr5.4:70993297-70993316 | MS.gene038208:intron | 30.0% | |
| AAGAAGAAGCAAATGCTAAT+AGG | + | chr5.4:70990980-70990999 | MS.gene038208:CDS | 30.0% | |
| AAGAAGTGAAAGATGTTTGT+AGG | + | chr5.4:70993325-70993344 | MS.gene038208:intron | 30.0% | |
| AAGCAAAGGTAAGAAGTTAA+AGG | - | chr5.4:70993295-70993314 | None:intergenic | 30.0% | |
| ACTTCTTACCTTTGCTTAAA+GGG | + | chr5.4:70993298-70993317 | MS.gene038208:intron | 30.0% | |
| AGAAAGTGAGTCAAACTTAA+GGG | + | chr5.4:70990199-70990218 | MS.gene038208:intron | 30.0% | |
| AGAGCTTTACTATATCTAGA+AGG | - | chr5.4:70991288-70991307 | None:intergenic | 30.0% | |
| AGAGTCTTCATACAAATCTA+AGG | - | chr5.4:70993718-70993737 | None:intergenic | 30.0% | |
| AGCATTAGAATATAGGTTCT+AGG | + | chr5.4:70992462-70992481 | MS.gene038208:intron | 30.0% | |
| AGTAAGAAGATAAAACTGTG+AGG | - | chr5.4:70995066-70995085 | None:intergenic | 30.0% | |
| ATAAATAGACAGATGTAGGT+AGG | + | chr5.4:70992186-70992205 | MS.gene038208:intron | 30.0% | |
| ATAACTAATAGAATGGGAAC+TGG | - | chr5.4:70991550-70991569 | None:intergenic | 30.0% | |
| ATATACAGTGAGAAAATGAG+AGG | + | chr5.4:70992216-70992235 | MS.gene038208:intron | 30.0% | |
| ATGCTAATACCTTAAAAGCA+CGG | - | chr5.4:70992447-70992466 | None:intergenic | 30.0% | |
| ATGTTTATGTGCTATGGATT+GGG | + | chr5.4:70991785-70991804 | MS.gene038208:intron | 30.0% | |
| ATTGAAATTAGCAATTGCTG+AGG | + | chr5.4:70990885-70990904 | MS.gene038208:CDS | 30.0% | |
| CATCACTAAGAATCATAAGA+AGG | + | chr5.4:70993758-70993777 | MS.gene038208:CDS | 30.0% | |
| CATGGGAAAACTTAATTACT+AGG | - | chr5.4:70993173-70993192 | None:intergenic | 30.0% | |
| CGACATAAAGGACTTAAATT+TGG | + | chr5.4:70990161-70990180 | MS.gene038208:intron | 30.0% | |
| CTCTCAACAACTATATTTCT+GGG | + | chr5.4:70992688-70992707 | MS.gene038208:intron | 30.0% | |
| CTGAAAAGTTTGTCTATGTT+TGG | - | chr5.4:70993661-70993680 | None:intergenic | 30.0% | |
| GAATGCTTAAAGATAGATCT+GGG | + | chr5.4:70991695-70991714 | MS.gene038208:intron | 30.0% | |
| GTTAGGTTAGAATCTACAAT+AGG | + | chr5.4:70990097-70990116 | MS.gene038208:intron | 30.0% | |
| TAGCATCCATAACAATACAA+AGG | - | chr5.4:70993024-70993043 | None:intergenic | 30.0% | |
| TCAACCATACAATATGAAAC+AGG | + | chr5.4:70994409-70994428 | MS.gene038208:CDS | 30.0% | |
| TCATGTATGAGATTTCATGT+TGG | + | chr5.4:70990527-70990546 | MS.gene038208:intron | 30.0% | |
| TCCTCTTATCTTCATTAAAG+AGG | - | chr5.4:70994679-70994698 | None:intergenic | 30.0% | |
| TCCTCTTTAATGAAGATAAG+AGG | + | chr5.4:70994675-70994694 | MS.gene038208:intron | 30.0% | |
| TCGATCCTAAATATGATACT+GGG | - | chr5.4:70992536-70992555 | None:intergenic | 30.0% | |
| TCTCTCAACAACTATATTTC+TGG | + | chr5.4:70992687-70992706 | MS.gene038208:intron | 30.0% | |
| TGAATGCTTAAAGATAGATC+TGG | + | chr5.4:70991694-70991713 | MS.gene038208:intron | 30.0% | |
| TTCAACAAAAATCATCCCTT+TGG | - | chr5.4:70990819-70990838 | None:intergenic | 30.0% | |
| TTCATTAAAGAGGAAAAAGG+TGG | - | chr5.4:70994669-70994688 | None:intergenic | 30.0% | |
| ! | AAGTTAATTATCATTGGCCT+TGG | - | chr5.4:70991866-70991885 | None:intergenic | 30.0% |
| ! | AATTAAGTTTTCCCATGGAA+TGG | + | chr5.4:70993176-70993195 | MS.gene038208:intron | 30.0% |
| ! | ATATTTTGTTGCATGTGTAC+AGG | + | chr5.4:70994153-70994172 | MS.gene038208:intron | 30.0% |
| ! | ATTAAGTTTTCCCATGGAAT+GGG | + | chr5.4:70993177-70993196 | MS.gene038208:intron | 30.0% |
| ! | CTAGTAATTAAGTTTTCCCA+TGG | + | chr5.4:70993171-70993190 | MS.gene038208:intron | 30.0% |
| ! | GAATAAGCTATCCGATTTTA+AGG | - | chr5.4:70992412-70992431 | None:intergenic | 30.0% |
| ! | GTTTGAAACTTGGAACAATA+TGG | + | chr5.4:70991592-70991611 | MS.gene038208:intron | 30.0% |
| ! | TCAAACTTAAGGGTATGAAA+GGG | + | chr5.4:70990209-70990228 | MS.gene038208:intron | 30.0% |
| ! | TCTTATTTCCCTTTAAGCAA+AGG | - | chr5.4:70993309-70993328 | None:intergenic | 30.0% |
| ! | TGTTGTTTAGGTTTGAAACT+TGG | + | chr5.4:70991582-70991601 | MS.gene038208:intron | 30.0% |
| ! | TTTTGCTTTGGTATGTGTAT+AGG | + | chr5.4:70994358-70994377 | MS.gene038208:intron | 30.0% |
| !! | AAAAAGGTGGTTTTCAAGAA+TGG | - | chr5.4:70994656-70994675 | None:intergenic | 30.0% |
| !! | CATTTTTCTGAAAATGTCAG+TGG | + | chr5.4:70991177-70991196 | MS.gene038208:CDS | 30.0% |
| !! | CGATTTTCTGAAAGCATAAT+AGG | - | chr5.4:70994565-70994584 | None:intergenic | 30.0% |
| !! | TACTTAGTTTTTACTGGATG+TGG | + | chr5.4:70995082-70995101 | MS.gene038208:intron | 30.0% |
| AAAAAGCAATATCGTGATGC+AGG | + | chr5.4:70994205-70994224 | MS.gene038208:CDS | 35.0% | |
| AACATGGGATATAAACCATC+GGG | + | chr5.4:70991336-70991355 | MS.gene038208:CDS | 35.0% | |
| AAGTAGATCCAAGTGGTTTA+TGG | - | chr5.4:70990339-70990358 | None:intergenic | 35.0% | |
| AATGGGAACTGGAAAGAAAA+AGG | - | chr5.4:70991539-70991558 | None:intergenic | 35.0% | |
| ACCCAAAAAGGTAGTTTAAG+GGG | + | chr5.4:70992720-70992739 | MS.gene038208:intron | 35.0% | |
| ACTATTAGTGTATCGAGGTA+TGG | - | chr5.4:70992254-70992273 | None:intergenic | 35.0% | |
| ACTGCTGTTAAGAAGCAATT+AGG | + | chr5.4:70991399-70991418 | MS.gene038208:CDS | 35.0% | |
| AGAAGAAAATAAAGTCTCCG+CGG | + | chr5.4:70990696-70990715 | MS.gene038208:CDS | 35.0% | |
| AGAAGATAAAACTGTGAGGT+TGG | - | chr5.4:70995062-70995081 | None:intergenic | 35.0% | |
| AGTGTCCCAGTATCATATTT+AGG | + | chr5.4:70992528-70992547 | MS.gene038208:intron | 35.0% | |
| ATAGCACATAAACATGATGC+AGG | - | chr5.4:70991780-70991799 | None:intergenic | 35.0% | |
| ATAGGGATTGTTTGCATTAC+TGG | + | chr5.4:70990115-70990134 | MS.gene038208:intron | 35.0% | |
| ATCGGGATATTTGAAAGTGA+AGG | + | chr5.4:70991353-70991372 | MS.gene038208:CDS | 35.0% | |
| ATGGGAACTGGAAAGAAAAA+GGG | - | chr5.4:70991538-70991557 | None:intergenic | 35.0% | |
| ATGTGGTGCTTATAAAGCTT+AGG | - | chr5.4:70992640-70992659 | None:intergenic | 35.0% | |
| ATTGCACCTTTCGGATTTAA+GGG | - | chr5.4:70991315-70991334 | None:intergenic | 35.0% | |
| CAACATGGGATATAAACCAT+CGG | + | chr5.4:70991335-70991354 | MS.gene038208:CDS | 35.0% | |
| CAACCCAAAAAGGTAGTTTA+AGG | + | chr5.4:70992718-70992737 | MS.gene038208:intron | 35.0% | |
| CAAGATAAGAAAGCTTTCCA+TGG | + | chr5.4:70993633-70993652 | MS.gene038208:CDS | 35.0% | |
| CAGTTGCTACATTTATGAAC+AGG | - | chr5.4:70993459-70993478 | None:intergenic | 35.0% | |
| CATGTTTATGTGCTATGGAT+TGG | + | chr5.4:70991784-70991803 | MS.gene038208:intron | 35.0% | |
| CGTTTGCTCAAGTCTTTATA+AGG | + | chr5.4:70992746-70992765 | MS.gene038208:intron | 35.0% | |
| CTACTTTCTGTGTGAGATAA+GGG | + | chr5.4:70990353-70990372 | MS.gene038208:intron | 35.0% | |
| CTGTTAAGAAGCAATTAGGA+AGG | + | chr5.4:70991403-70991422 | MS.gene038208:CDS | 35.0% | |
| CTTACAAGACAGTTTGGTAA+GGG | - | chr5.4:70992607-70992626 | None:intergenic | 35.0% | |
| GAACTAAACTTCTTGCTTCT+CGG | + | chr5.4:70990643-70990662 | MS.gene038208:intron | 35.0% | |
| GAGAAAGTGAGTCAAACTTA+AGG | + | chr5.4:70990198-70990217 | MS.gene038208:intron | 35.0% | |
| GATGCTTTCAAATGAGACTA+TGG | + | chr5.4:70994237-70994256 | MS.gene038208:CDS | 35.0% | |
| GATTTGTATGAAGACTCTAC+TGG | + | chr5.4:70993720-70993739 | MS.gene038208:CDS | 35.0% | |
| GCAATTAGGAAGGAATTATC+AGG | + | chr5.4:70991413-70991432 | MS.gene038208:CDS | 35.0% | |
| GCACAATGTTGTTAGAAACA+GGG | - | chr5.4:70995108-70995127 | None:intergenic | 35.0% | |
| GCATGGTGATTATAAGTATC+TGG | + | chr5.4:70991077-70991096 | MS.gene038208:CDS | 35.0% | |
| GCTAATTTCAATTCCTCTGT+CGG | - | chr5.4:70990877-70990896 | None:intergenic | 35.0% | |
| GGAACCTGTTTCATATTGTA+TGG | - | chr5.4:70994416-70994435 | None:intergenic | 35.0% | |
| GTACAGGATGAGTTGTTTAA+GGG | + | chr5.4:70994169-70994188 | MS.gene038208:intron | 35.0% | |
| GTCGATCCTAAATATGATAC+TGG | - | chr5.4:70992537-70992556 | None:intergenic | 35.0% | |
| TAAACATGATGCAGGTTAGA+TGG | - | chr5.4:70991772-70991791 | None:intergenic | 35.0% | |
| TAAGCTCCAAAACTTCTAAG+AGG | - | chr5.4:70994509-70994528 | None:intergenic | 35.0% | |
| TAAGTATCTGGATCCTAAAG+AGG | + | chr5.4:70991089-70991108 | MS.gene038208:CDS | 35.0% | |
| TACAGGATGAGTTGTTTAAG+GGG | + | chr5.4:70994170-70994189 | MS.gene038208:intron | 35.0% | |
| TAGGGATTGTTTGCATTACT+GGG | + | chr5.4:70990116-70990135 | MS.gene038208:intron | 35.0% | |
| TCAAATTCTACACCAAGTAG+TGG | - | chr5.4:70991447-70991466 | None:intergenic | 35.0% | |
| TCCTTCCATATGAGTATCTT+GGG | - | chr5.4:70993571-70993590 | None:intergenic | 35.0% | |
| TCGGGATATTTGAAAGTGAA+GGG | + | chr5.4:70991354-70991373 | MS.gene038208:CDS | 35.0% | |
| TCTACTTTCTGTGTGAGATA+AGG | + | chr5.4:70990352-70990371 | MS.gene038208:intron | 35.0% | |
| TCTTGACTATTAGTGTATCG+AGG | - | chr5.4:70992259-70992278 | None:intergenic | 35.0% | |
| TGACAGAAAAGCAAGTTTCT+GGG | + | chr5.4:70990917-70990936 | MS.gene038208:CDS | 35.0% | |
| TGCACAATGTTGTTAGAAAC+AGG | - | chr5.4:70995109-70995128 | None:intergenic | 35.0% | |
| TGCATCATGTTTATGTGCTA+TGG | + | chr5.4:70991779-70991798 | MS.gene038208:intron | 35.0% | |
| TGTACAGGATGAGTTGTTTA+AGG | + | chr5.4:70994168-70994187 | MS.gene038208:intron | 35.0% | |
| TTCACTTTCAAATATCCCGA+TGG | - | chr5.4:70991354-70991373 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAGTTTC+TGG | + | chr5.4:70990916-70990935 | MS.gene038208:CDS | 35.0% | |
| TTTCTTCATAGCGATCACTA+TGG | - | chr5.4:70993830-70993849 | None:intergenic | 35.0% | |
| TTTGTCTATGTTTGGTACCA+TGG | - | chr5.4:70993653-70993672 | None:intergenic | 35.0% | |
| ! | AAAAGCACGGCATTATCTTT+AGG | - | chr5.4:70992434-70992453 | None:intergenic | 35.0% |
| ! | AAGATAATGCCGTGCTTTTA+AGG | + | chr5.4:70992435-70992454 | MS.gene038208:intron | 35.0% |
| ! | AAGCTTTATAAGCACCACAT+AGG | + | chr5.4:70992640-70992659 | MS.gene038208:intron | 35.0% |
| ! | ATGTCTGGCTTACAAGTTTA+TGG | - | chr5.4:70991968-70991987 | None:intergenic | 35.0% |
| ! | CAAACTTAAGGGTATGAAAG+GGG | + | chr5.4:70990210-70990229 | MS.gene038208:intron | 35.0% |
| ! | GAATTGTGGATTGAGTTTGA+AGG | - | chr5.4:70994008-70994027 | None:intergenic | 35.0% |
| ! | GACTTAAATTTGGGGTCTTT+GGG | + | chr5.4:70990171-70990190 | MS.gene038208:intron | 35.0% |
| ! | GATTTGGGTCATTCATTTTG+TGG | + | chr5.4:70990034-70990053 | MS.gene038208:intron | 35.0% |
| ! | GGAGAAATTTTATACGGGTA+GGG | + | chr5.4:70990768-70990787 | MS.gene038208:intron | 35.0% |
| ! | GGCTTGGAGAAATTTTATAC+GGG | + | chr5.4:70990763-70990782 | MS.gene038208:CDS | 35.0% |
| ! | GGGCTTGGAGAAATTTTATA+CGG | + | chr5.4:70990762-70990781 | MS.gene038208:CDS | 35.0% |
| ! | GTCAAACTTAAGGGTATGAA+AGG | + | chr5.4:70990208-70990227 | MS.gene038208:intron | 35.0% |
| ! | TGGAGAAATTTTATACGGGT+AGG | + | chr5.4:70990767-70990786 | MS.gene038208:intron | 35.0% |
| ! | TGGCTGATCATTTAGGATAA+AGG | + | chr5.4:70991612-70991631 | MS.gene038208:intron | 35.0% |
| ! | TTCTGAAAATGTCAGTGGAA+TGG | + | chr5.4:70991182-70991201 | MS.gene038208:CDS | 35.0% |
| ! | TTTTATCCTTTAACCTTCGG+TGG | - | chr5.4:70990951-70990970 | None:intergenic | 35.0% |
| !! | TTAGAATATAGGTTCTAGGC+TGG | + | chr5.4:70992466-70992485 | MS.gene038208:intron | 35.0% |
| !!! | AGGTGTTGTTTTGCTTGTTT+AGG | + | chr5.4:70992853-70992872 | MS.gene038208:intron | 35.0% |
| !!! | GAGCTTTTAGTTTTAGTGTC+AGG | + | chr5.4:70992021-70992040 | MS.gene038208:intron | 35.0% |
| AAAATCACAAGGTGTGGGAT+GGG | - | chr5.4:70994836-70994855 | None:intergenic | 40.0% | |
| AACTCAATCCACAATTCTCG+AGG | + | chr5.4:70994011-70994030 | MS.gene038208:CDS | 40.0% | |
| AACTTAAGGTTCATGGCACT+GGG | + | chr5.4:70992806-70992825 | MS.gene038208:intron | 40.0% | |
| AAGAAAGAGGGCTATCTTCT+AGG | + | chr5.4:70994048-70994067 | MS.gene038208:CDS | 40.0% | |
| AAGGCAAAATCACAAGGTGT+GGG | - | chr5.4:70994841-70994860 | None:intergenic | 40.0% | |
| AATTTGATCCACTTCCTCCA+GGG | + | chr5.4:70991460-70991479 | MS.gene038208:CDS | 40.0% | |
| ACACAGAAAGTAGATCCAAG+TGG | - | chr5.4:70990346-70990365 | None:intergenic | 40.0% | |
| ACACTCCTTTGCACATTCTT+TGG | - | chr5.4:70993906-70993925 | None:intergenic | 40.0% | |
| ACAGGATGAGTTGTTTAAGG+GGG | + | chr5.4:70994171-70994190 | MS.gene038208:intron | 40.0% | |
| ACGATATCAATCCCATTCCA+TGG | - | chr5.4:70993191-70993210 | None:intergenic | 40.0% | |
| AGACAGTTTGGTAAGGGTTA+AGG | - | chr5.4:70992601-70992620 | None:intergenic | 40.0% | |
| AGCCACAAACCCTCAAAATA+TGG | - | chr5.4:70992378-70992397 | None:intergenic | 40.0% | |
| ATTCACTTGTAGTCAAACCG+AGG | - | chr5.4:70994868-70994887 | None:intergenic | 40.0% | |
| CAAGAACGTATGTATCCTCA+AGG | + | chr5.4:70991240-70991259 | MS.gene038208:CDS | 40.0% | |
| CAGACAAATCACGATTGTAG+AGG | - | chr5.4:70991128-70991147 | None:intergenic | 40.0% | |
| CCAAACTGTCTTGTAAGGTA+AGG | + | chr5.4:70992610-70992629 | MS.gene038208:intron | 40.0% | |
| CCAATCCAAAGAATGTGCAA+AGG | + | chr5.4:70993898-70993917 | MS.gene038208:CDS | 40.0% | |
| CCTTACAAGACAGTTTGGTA+AGG | - | chr5.4:70992608-70992627 | None:intergenic | 40.0% | |
| CCTTACCAAACTGTCTTGTA+AGG | + | chr5.4:70992605-70992624 | MS.gene038208:intron | 40.0% | |
| CCTTACCTTACAAGACAGTT+TGG | - | chr5.4:70992613-70992632 | None:intergenic | 40.0% | |
| CCTTTGCACATTCTTTGGAT+TGG | - | chr5.4:70993901-70993920 | None:intergenic | 40.0% | |
| CGATATCAATCCCATTCCAT+GGG | - | chr5.4:70993190-70993209 | None:intergenic | 40.0% | |
| CTCCTTCCATATGAGTATCT+TGG | - | chr5.4:70993572-70993591 | None:intergenic | 40.0% | |
| CTGTGGATACTGAAGAAAGA+GGG | + | chr5.4:70994036-70994055 | MS.gene038208:CDS | 40.0% | |
| GACAGTTTGGTAAGGGTTAA+GGG | - | chr5.4:70992600-70992619 | None:intergenic | 40.0% | |
| GACTAAACTAAACCCTGCTA+GGG | - | chr5.4:70994814-70994833 | None:intergenic | 40.0% | |
| GATTGCACCTTTCGGATTTA+AGG | - | chr5.4:70991316-70991335 | None:intergenic | 40.0% | |
| GGAAGGAATTATCAGGAAGA+TGG | + | chr5.4:70991420-70991439 | MS.gene038208:CDS | 40.0% | |
| GGGTCTTAACTTAAGGTTCA+TGG | + | chr5.4:70992799-70992818 | MS.gene038208:intron | 40.0% | |
| GGTTTGAAGGCAAAATCACA+AGG | - | chr5.4:70994847-70994866 | None:intergenic | 40.0% | |
| GTCATTGACCATAAACCACT+TGG | + | chr5.4:70990328-70990347 | MS.gene038208:intron | 40.0% | |
| GTTGCATGATGTTCATGTTC+AGG | + | chr5.4:70993605-70993624 | MS.gene038208:CDS | 40.0% | |
| TAAACTTCTTGCTTCTCGGT+TGG | + | chr5.4:70990647-70990666 | MS.gene038208:intron | 40.0% | |
| TAACTTAAGGTTCATGGCAC+TGG | + | chr5.4:70992805-70992824 | MS.gene038208:intron | 40.0% | |
| TAAGGGTTAAGGGTTGAGTT+AGG | - | chr5.4:70992590-70992609 | None:intergenic | 40.0% | |
| TACTGGGTAGATTGTTGCAA+TGG | + | chr5.4:70990132-70990151 | MS.gene038208:intron | 40.0% | |
| TCAGCAATATGGTATGGTTC+TGG | - | chr5.4:70993049-70993068 | None:intergenic | 40.0% | |
| TCCCAAGATACTCATATGGA+AGG | + | chr5.4:70993567-70993586 | MS.gene038208:CDS | 40.0% | |
| TCTGTGGATACTGAAGAAAG+AGG | + | chr5.4:70994035-70994054 | MS.gene038208:CDS | 40.0% | |
| TCTGTTGCAGATATGACGTA+TGG | + | chr5.4:70991144-70991163 | MS.gene038208:CDS | 40.0% | |
| TGAAAGAGAGTGAGAAAGCA+GGG | - | chr5.4:70993502-70993521 | None:intergenic | 40.0% | |
| TGGGAACTGGAAAGAAAAAG+GGG | - | chr5.4:70991537-70991556 | None:intergenic | 40.0% | |
| TGGTTCCCAAGATACTCATA+TGG | + | chr5.4:70993563-70993582 | MS.gene038208:CDS | 40.0% | |
| TTCATTGTAGCTAAGGTGCA+AGG | + | chr5.4:70992921-70992940 | MS.gene038208:intron | 40.0% | |
| TTGGTAAATTGAGCTCAACG+TGG | + | chr5.4:70994725-70994744 | MS.gene038208:intron | 40.0% | |
| ! | CAAAACTTCTAAGAGGACGT+GGG | - | chr5.4:70994502-70994521 | None:intergenic | 40.0% |
| ! | CATATGGAAGGAGTTGACTT+TGG | + | chr5.4:70993579-70993598 | MS.gene038208:CDS | 40.0% |
| ! | CTTTTCACTGTGGAGATTTC+TGG | - | chr5.4:70993091-70993110 | None:intergenic | 40.0% |
| ! | GCACACATGATGTTTTGCTT+TGG | + | chr5.4:70994346-70994365 | MS.gene038208:intron | 40.0% |
| ! | GCCCCTTAAACTACCTTTTT+GGG | - | chr5.4:70992724-70992743 | None:intergenic | 40.0% |
| ! | GGACTTAAATTTGGGGTCTT+TGG | + | chr5.4:70990170-70990189 | MS.gene038208:intron | 40.0% |
| ! | GTGATTTTGCCTTCAAACCT+CGG | + | chr5.4:70994848-70994867 | MS.gene038208:intron | 40.0% |
| ! | TAGGGCATACCTTTTTGCAA+AGG | - | chr5.4:70994796-70994815 | None:intergenic | 40.0% |
| ! | TCAATCCAAAGAAAGCGCAA+AGG | + | chr5.4:70993961-70993980 | MS.gene038208:CDS | 40.0% |
| ! | TTAAGGGTATGAAAGGGGTT+TGG | + | chr5.4:70990215-70990234 | MS.gene038208:intron | 40.0% |
| ! | TTCTAGAAATAACCTACCCC+AGG | - | chr5.4:70991732-70991751 | None:intergenic | 40.0% |
| !! | AGATAGATCTGGGTTTGCTA+TGG | + | chr5.4:70991705-70991724 | MS.gene038208:intron | 40.0% |
| !! | CAATGGTGGATTCGACATAA+AGG | + | chr5.4:70990149-70990168 | MS.gene038208:intron | 40.0% |
| !! | CTAGAAGCACCTTTGCAAAA+AGG | + | chr5.4:70994784-70994803 | MS.gene038208:intron | 40.0% |
| !! | GATAGATCTGGGTTTGCTAT+GGG | + | chr5.4:70991706-70991725 | MS.gene038208:intron | 40.0% |
| !! | GCTATCTTCTAGGATGACTA+AGG | + | chr5.4:70994058-70994077 | MS.gene038208:CDS | 40.0% |
| !! | GGCGTTTTGAGCTTTCTTTT+CGG | - | chr5.4:70990730-70990749 | None:intergenic | 40.0% |
| !! | GGGGTAGGTTATTTCTAGAA+TGG | + | chr5.4:70991732-70991751 | MS.gene038208:intron | 40.0% |
| !! | GTCCATATTTTGAGGGTTTG+TGG | + | chr5.4:70992373-70992392 | MS.gene038208:intron | 40.0% |
| !! | TGTGAGGTTGGTGTGTATTT+GGG | - | chr5.4:70995050-70995069 | None:intergenic | 40.0% |
| !! | TTTGCAAAGGTGCTTCTAGT+GGG | - | chr5.4:70994783-70994802 | None:intergenic | 40.0% |
| !!! | CTGTTTTTTCCAGCTAACCA+AGG | - | chr5.4:70994966-70994985 | None:intergenic | 40.0% |
| !!! | GCGGAGACTTTATTTTCTTC+TGG | - | chr5.4:70990697-70990716 | None:intergenic | 40.0% |
| !!! | TTTTGCAAAGGTGCTTCTAG+TGG | - | chr5.4:70994784-70994803 | None:intergenic | 40.0% |
| AAAACGCCTGCACAGCTTAA+GGG | + | chr5.4:70990742-70990761 | MS.gene038208:CDS | 45.0% | |
| AAACATCATGTGTGCGTGCA+TGG | - | chr5.4:70994341-70994360 | None:intergenic | 45.0% | |
| AAAGAGAGTGAGAAAGCAGG+GGG | - | chr5.4:70993500-70993519 | None:intergenic | 45.0% | |
| AAGCAATATCGTGATGCAGG+TGG | + | chr5.4:70994208-70994227 | MS.gene038208:CDS | 45.0% | |
| AGAGCACAAATATCCGACAG+AGG | + | chr5.4:70990861-70990880 | MS.gene038208:intron | 45.0% | |
| AGGAAGTCTGCATGTTTGAC+TGG | - | chr5.4:70993858-70993877 | None:intergenic | 45.0% | |
| AGGCCAAGATCCATATGAGA+TGG | + | chr5.4:70991260-70991279 | MS.gene038208:CDS | 45.0% | |
| AGGTCGTAACTCTAGTCGAT+GGG | + | chr5.4:70992660-70992679 | MS.gene038208:intron | 45.0% | |
| ATGAGTTGTTTAAGGGGGAC+AGG | + | chr5.4:70994176-70994195 | MS.gene038208:CDS | 45.0% | |
| ATTTGATCCACTTCCTCCAG+GGG | + | chr5.4:70991461-70991480 | MS.gene038208:CDS | 45.0% | |
| CAAAATCACAAGGTGTGGGA+TGG | - | chr5.4:70994837-70994856 | None:intergenic | 45.0% | |
| CAAACTGAAGACGCAGTTCA+TGG | + | chr5.4:70991495-70991514 | MS.gene038208:CDS | 45.0% | |
| CATGAACTGCGTCTTCAGTT+TGG | - | chr5.4:70991497-70991516 | None:intergenic | 45.0% | |
| CCTAAAGAGGTTGAGAGCAA+CGG | + | chr5.4:70991102-70991121 | MS.gene038208:CDS | 45.0% | |
| CGATGCAGGGTCTTAACTTA+AGG | + | chr5.4:70992792-70992811 | MS.gene038208:intron | 45.0% | |
| CTACTTACAGAGCTAAGACC+AGG | - | chr5.4:70993118-70993137 | None:intergenic | 45.0% | |
| CTAGAAGGCTCCATCTCATA+TGG | - | chr5.4:70991273-70991292 | None:intergenic | 45.0% | |
| CTGTTGCTGAGATAGAACCA+AGG | + | chr5.4:70994435-70994454 | MS.gene038208:CDS | 45.0% | |
| CTTCCACCCTTAAATCCGAA+AGG | + | chr5.4:70991306-70991325 | MS.gene038208:CDS | 45.0% | |
| GAAAGAGAGTGAGAAAGCAG+GGG | - | chr5.4:70993501-70993520 | None:intergenic | 45.0% | |
| GAAGAGCAGGATCAGCAATA+TGG | - | chr5.4:70993060-70993079 | None:intergenic | 45.0% | |
| GAAGGCAAAATCACAAGGTG+TGG | - | chr5.4:70994842-70994861 | None:intergenic | 45.0% | |
| GAATTTGATCCACTTCCTCC+AGG | + | chr5.4:70991459-70991478 | MS.gene038208:CDS | 45.0% | |
| GACTAGAGTTACGACCTATG+TGG | - | chr5.4:70992657-70992676 | None:intergenic | 45.0% | |
| GAGATAAGGGTTTGCACTGA+AGG | + | chr5.4:70990366-70990385 | MS.gene038208:intron | 45.0% | |
| GAGCGTGAAGTTTGTAGTAG+TGG | + | chr5.4:70992496-70992515 | MS.gene038208:intron | 45.0% | |
| GCAGGATCAGCAATATGGTA+TGG | - | chr5.4:70993055-70993074 | None:intergenic | 45.0% | |
| GCTCCATCTCATATGGATCT+TGG | - | chr5.4:70991266-70991285 | None:intergenic | 45.0% | |
| GGAACTGGAAAGAAAAAGGG+GGG | - | chr5.4:70991535-70991554 | None:intergenic | 45.0% | |
| GGAAGTCTGCATGTTTGACT+GGG | - | chr5.4:70993857-70993876 | None:intergenic | 45.0% | |
| GGACTAAACTAAACCCTGCT+AGG | - | chr5.4:70994815-70994834 | None:intergenic | 45.0% | |
| GGGAACTGGAAAGAAAAAGG+GGG | - | chr5.4:70991536-70991555 | None:intergenic | 45.0% | |
| GTAGTCAAACCGAGGTTTGA+AGG | - | chr5.4:70994860-70994879 | None:intergenic | 45.0% | |
| GTGAAAGAGAGTGAGAAAGC+AGG | - | chr5.4:70993503-70993522 | None:intergenic | 45.0% | |
| TAGAACCAAGGAAAGCTCAG+AGG | + | chr5.4:70994447-70994466 | MS.gene038208:CDS | 45.0% | |
| TAGGTCGTAACTCTAGTCGA+TGG | + | chr5.4:70992659-70992678 | MS.gene038208:intron | 45.0% | |
| TCACTCCTTTGCGCTTTCTT+TGG | - | chr5.4:70993969-70993988 | None:intergenic | 45.0% | |
| TCATCCTCGCTAAAGCTAGA+CGG | - | chr5.4:70995165-70995184 | None:intergenic | 45.0% | |
| TCTGGAGAATTCAGAAGAGC+AGG | - | chr5.4:70993073-70993092 | None:intergenic | 45.0% | |
| TCTGTCGGATATTTGTGCTC+TGG | - | chr5.4:70990862-70990881 | None:intergenic | 45.0% | |
| TGGGTAGATTGTTGCAATGG+TGG | + | chr5.4:70990135-70990154 | MS.gene038208:intron | 45.0% | |
| ! | AAGGTGCTTCTAGTGGGATT+CGG | - | chr5.4:70994777-70994796 | None:intergenic | 45.0% |
| ! | CAAAAAGGTATGCCCTAGCA+GGG | + | chr5.4:70994799-70994818 | MS.gene038208:intron | 45.0% |
| ! | CAGAAAAGCAAGTTTCTGGG+TGG | + | chr5.4:70990920-70990939 | MS.gene038208:CDS | 45.0% |
| ! | CCAAAACTTCTAAGAGGACG+TGG | - | chr5.4:70994503-70994522 | None:intergenic | 45.0% |
| ! | CCACGTCCTCTTAGAAGTTT+TGG | + | chr5.4:70994500-70994519 | MS.gene038208:intron | 45.0% |
| ! | CCCATGTTGATTGCACCTTT+CGG | - | chr5.4:70991324-70991343 | None:intergenic | 45.0% |
| ! | CCGAAAGGTGCAATCAACAT+GGG | + | chr5.4:70991321-70991340 | MS.gene038208:CDS | 45.0% |
| ! | CGCCCCTTAAACTACCTTTT+TGG | - | chr5.4:70992725-70992744 | None:intergenic | 45.0% |
| ! | GTTTTGCCACCGAAGGTTAA+AGG | + | chr5.4:70990942-70990961 | MS.gene038208:CDS | 45.0% |
| ! | TCCGAAAGGTGCAATCAACA+TGG | + | chr5.4:70991320-70991339 | MS.gene038208:CDS | 45.0% |
| ! | TCTTTTCGGAAACTTCTCCG+CGG | - | chr5.4:70990716-70990735 | None:intergenic | 45.0% |
| !! | AGCGTAAAGTGCTGCTTAGT+TGG | + | chr5.4:70994706-70994725 | MS.gene038208:intron | 45.0% |
| !! | AGTAATGCCAGTCGTTTTCC+TGG | + | chr5.4:70993681-70993700 | MS.gene038208:CDS | 45.0% |
| !! | CTGTGAGGTTGGTGTGTATT+TGG | - | chr5.4:70995051-70995070 | None:intergenic | 45.0% |
| !! | CTTGGTTCTATCTCAGCAAC+AGG | - | chr5.4:70994437-70994456 | None:intergenic | 45.0% |
| !! | TCATATGGATCTTGGCCTTG+AGG | - | chr5.4:70991258-70991277 | None:intergenic | 45.0% |
| !! | AATTTATTAATATTTGTATT+TGG | + | chr5.4:70992110-70992129 | MS.gene038208:intron | 5.0% |
| AGGCGACAAGATCGTTCAAG+TGG | + | chr5.4:70991000-70991019 | MS.gene038208:CDS | 50.0% | |
| AGTCTGCATGTTTGACTGGG+AGG | - | chr5.4:70993854-70993873 | None:intergenic | 50.0% | |
| AGTTAAGACCCTGCATCGAG+TGG | - | chr5.4:70992790-70992809 | None:intergenic | 50.0% | |
| ATCATGTGTGCGTGCATGGA+AGG | - | chr5.4:70994337-70994356 | None:intergenic | 50.0% | |
| CAAAACGCCTGCACAGCTTA+AGG | + | chr5.4:70990741-70990760 | MS.gene038208:CDS | 50.0% | |
| CAGATATGACGTATGGACGC+AGG | + | chr5.4:70991151-70991170 | MS.gene038208:CDS | 50.0% | |
| CAGGAAGATGGTCCACTACT+TGG | + | chr5.4:70991432-70991451 | MS.gene038208:CDS | 50.0% | |
| CATAAGAAGGATGCCAAGCG+CGG | + | chr5.4:70993771-70993790 | MS.gene038208:CDS | 50.0% | |
| CCACAATTCTCGAGGTTCTG+TGG | + | chr5.4:70994019-70994038 | MS.gene038208:CDS | 50.0% | |
| CCACAGAACCTCGAGAATTG+TGG | - | chr5.4:70994022-70994041 | None:intergenic | 50.0% | |
| CCGTTGCTCTCAACCTCTTT+AGG | - | chr5.4:70991105-70991124 | None:intergenic | 50.0% | |
| CTACAAACTTCACGCTCCAG+AGG | - | chr5.4:70992493-70992512 | None:intergenic | 50.0% | |
| CTGAAGACGCAGTTCATGGT+AGG | + | chr5.4:70991499-70991518 | MS.gene038208:intron | 50.0% | |
| GCACCTTTCGGATTTAAGGG+TGG | - | chr5.4:70991312-70991331 | None:intergenic | 50.0% | |
| GGGCTCAACTCAACCCAAAA+AGG | + | chr5.4:70992708-70992727 | MS.gene038208:intron | 50.0% | |
| GTTAAGACCCTGCATCGAGT+GGG | - | chr5.4:70992789-70992808 | None:intergenic | 50.0% | |
| GTTTGGCATTCAAATGCCCC+TGG | - | chr5.4:70991480-70991499 | None:intergenic | 50.0% | |
| TCCACAGTGAAAAGTCGACC+TGG | + | chr5.4:70993097-70993116 | MS.gene038208:CDS | 50.0% | |
| TCTAAGGAAGAGTTCCTGCC+AGG | - | chr5.4:70993702-70993721 | None:intergenic | 50.0% | |
| TGCTGATACCAGTTCCTCAC+TGG | + | chr5.4:70995188-70995207 | MS.gene038208:CDS | 50.0% | |
| ! | GCAAAAAGGTATGCCCTAGC+AGG | + | chr5.4:70994798-70994817 | MS.gene038208:intron | 50.0% |
| ! | TTCTAAGAGGACGTGGGTGT+CGG | - | chr5.4:70994496-70994515 | None:intergenic | 50.0% |
| !! | ACCAGGTCGACTTTTCACTG+TGG | - | chr5.4:70993101-70993120 | None:intergenic | 50.0% |
| !! | TCGTTCAAGTGGTGTCATCC+AGG | + | chr5.4:70991011-70991030 | MS.gene038208:CDS | 50.0% |
| ATCGTGATGCAGGTGGAGCA+GGG | + | chr5.4:70994215-70994234 | MS.gene038208:CDS | 55.0% | |
| ATGTCCGCAGTCGTACGCAA+GGG | + | chr5.4:70994937-70994956 | MS.gene038208:intron | 55.0% | |
| ATGTGTGCGTGCATGGAAGG+AGG | - | chr5.4:70994334-70994353 | None:intergenic | 55.0% | |
| CAAGGGACACCTTGGTTAGC+TGG | + | chr5.4:70994954-70994973 | MS.gene038208:intron | 55.0% | |
| CCATATGCCCACTCGATGCA+GGG | + | chr5.4:70992779-70992798 | MS.gene038208:intron | 55.0% | |
| GCTCACCTCTGAGCTTTCCT+TGG | - | chr5.4:70994455-70994474 | None:intergenic | 55.0% | |
| GGACTTGGGCAAGATTCGTG+CGG | + | chr5.4:70991045-70991064 | MS.gene038208:CDS | 55.0% | |
| GTTCCTGCCAGGAAAACGAC+TGG | - | chr5.4:70993691-70993710 | None:intergenic | 55.0% | |
| TATCGTGATGCAGGTGGAGC+AGG | + | chr5.4:70994214-70994233 | MS.gene038208:CDS | 55.0% | |
| TATGTCCGCAGTCGTACGCA+AGG | + | chr5.4:70994936-70994955 | MS.gene038208:intron | 55.0% | |
| TCAAATGCCCCTGGAGGAAG+TGG | - | chr5.4:70991471-70991490 | None:intergenic | 55.0% | |
| TCCAAGCCCTTAAGCTGTGC+AGG | - | chr5.4:70990751-70990770 | None:intergenic | 55.0% | |
| TCCATATGCCCACTCGATGC+AGG | + | chr5.4:70992778-70992797 | MS.gene038208:intron | 55.0% | |
| TCGTGCGGAAGCAGTAAGCA+TGG | + | chr5.4:70991060-70991079 | MS.gene038208:CDS | 55.0% | |
| TCTAAGAGGACGTGGGTGTC+GGG | - | chr5.4:70994495-70994514 | None:intergenic | 55.0% | |
| TGGCATTCAAATGCCCCTGG+AGG | - | chr5.4:70991477-70991496 | None:intergenic | 55.0% | |
| ! | AGGATCGTGGCAGTGGACTT+GGG | + | chr5.4:70991031-70991050 | MS.gene038208:CDS | 55.0% |
| !! | AGTGGTGTCATCCAGGATCG+TGG | + | chr5.4:70991018-70991037 | MS.gene038208:CDS | 55.0% |
| !! | ATCTGGGTTTGCTATGGGCC+TGG | + | chr5.4:70991711-70991730 | MS.gene038208:intron | 55.0% |
| !! | ATGCCAGTCGTTTTCCTGGC+AGG | + | chr5.4:70993685-70993704 | MS.gene038208:CDS | 55.0% |
| !! | GATGCCGTCTAGCTTTAGCG+AGG | + | chr5.4:70995158-70995177 | MS.gene038208:CDS | 55.0% |
| !! | TAGGTTCTAGGCTGGACCTC+TGG | + | chr5.4:70992474-70992493 | MS.gene038208:intron | 55.0% |
| !! | TCTGGGTTTGCTATGGGCCT+GGG | + | chr5.4:70991712-70991731 | MS.gene038208:intron | 55.0% |
| CAAGTCCACTGCCACGATCC+TGG | - | chr5.4:70991032-70991051 | None:intergenic | 60.0% | |
| CATACCCTCAACACCGCGCT+TGG | - | chr5.4:70993787-70993806 | None:intergenic | 60.0% | |
| CCCTGCATCGAGTGGGCATA+TGG | - | chr5.4:70992782-70992801 | None:intergenic | 60.0% | |
| GCCTGCACAGCTTAAGGGCT+TGG | + | chr5.4:70990747-70990766 | MS.gene038208:CDS | 60.0% | |
| GTCATCCAGGATCGTGGCAG+TGG | + | chr5.4:70991024-70991043 | MS.gene038208:CDS | 60.0% | |
| GTCGTACGCAAGGGACACCT+TGG | + | chr5.4:70994946-70994965 | MS.gene038208:intron | 60.0% | |
| GTGTCCCTTGCGTACGACTG+CGG | - | chr5.4:70994944-70994963 | None:intergenic | 60.0% | |
| ! | CAGGATCGTGGCAGTGGACT+TGG | + | chr5.4:70991030-70991049 | MS.gene038208:CDS | 60.0% |
| ! | GATGCCAAGCGCGGTGTTGA+GGG | + | chr5.4:70993780-70993799 | MS.gene038208:CDS | 60.0% |
| !! | CTGGGTGGTTTTGCCACCGA+AGG | + | chr5.4:70990935-70990954 | MS.gene038208:CDS | 60.0% |
| !! | CTGGGTTTGCTATGGGCCTG+GGG | + | chr5.4:70991713-70991732 | MS.gene038208:intron | 60.0% |
| !! | GTTTGCTATGGGCCTGGGGT+AGG | + | chr5.4:70991717-70991736 | MS.gene038208:intron | 60.0% |
| ! | GGATGCCAAGCGCGGTGTTG+AGG | + | chr5.4:70993779-70993798 | MS.gene038208:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 70989990 | 70995215 | 70989990 | ID=MS.gene038208 |
| chr5.4 | mRNA | 70989990 | 70995215 | 70989990 | ID=MS.gene038208.t1;Parent=MS.gene038208 |
| chr5.4 | exon | 70989990 | 70989996 | 70989990 | ID=MS.gene038208.t1.exon1;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70989990 | 70989996 | 70989990 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70990677 | 70990784 | 70990677 | ID=MS.gene038208.t1.exon2;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70990677 | 70990784 | 70990677 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70990863 | 70991516 | 70990863 | ID=MS.gene038208.t1.exon3;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70990863 | 70991516 | 70990863 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70993050 | 70993129 | 70993050 | ID=MS.gene038208.t1.exon4;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70993050 | 70993129 | 70993050 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70993537 | 70994079 | 70993537 | ID=MS.gene038208.t1.exon5;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70993537 | 70994079 | 70993537 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70994175 | 70994258 | 70994175 | ID=MS.gene038208.t1.exon6;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70994175 | 70994258 | 70994175 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70994380 | 70994468 | 70994380 | ID=MS.gene038208.t1.exon7;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70994380 | 70994468 | 70994380 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| chr5.4 | exon | 70995146 | 70995215 | 70995146 | ID=MS.gene038208.t1.exon8;Parent=MS.gene038208.t1 |
| chr5.4 | CDS | 70995146 | 70995215 | 70995146 | ID=cds.MS.gene038208.t1;Parent=MS.gene038208.t1 |
| Gene Sequence |
| Protein sequence |
