AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03842

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03842.t1 MTR_4g053250 96.169 496 12 1 1 496 1 489 0.0 986
MS.gene03842.t1 MTR_2g086420 65.166 511 149 8 1 496 1 497 0.0 621
MS.gene03842.t1 MTR_2g086420 64.971 511 149 8 1 496 1 496 0.0 619
MS.gene03842.t1 MTR_7g092750 53.774 318 124 5 174 468 45 362 5.71e-112 336
MS.gene03842.t1 MTR_7g089800 48.634 366 158 5 119 468 72 423 8.99e-112 337
MS.gene03842.t1 MTR_7g089800 48.634 366 158 5 119 468 101 452 1.56e-111 338
MS.gene03842.t1 MTR_7g092750 53.774 318 124 5 174 468 146 463 3.03e-111 337
MS.gene03842.t1 MTR_8g040120 57.732 291 104 3 194 468 179 466 3.59e-111 337
MS.gene03842.t1 MTR_3g087940 45.892 353 160 5 126 468 30 361 8.88e-104 315
MS.gene03842.t1 MTR_5g054900 52.778 288 123 2 194 468 66 353 7.97e-103 312
MS.gene03842.t1 MTR_5g054900 50.000 312 139 3 170 468 127 434 6.42e-102 312
MS.gene03842.t1 MTR_5g054900 52.083 288 121 3 194 468 66 349 2.97e-99 303
MS.gene03842.t1 MTR_7g092750 50.000 318 110 6 174 468 146 437 5.58e-98 302
MS.gene03842.t1 MTR_5g054900 49.359 312 137 4 170 468 157 460 7.07e-98 303
MS.gene03842.t1 MTR_1g111310 49.333 300 138 2 183 468 408 707 1.43e-93 299
MS.gene03842.t1 MTR_1g111310 49.301 286 139 2 183 462 41 326 3.18e-83 272
MS.gene03842.t1 MTR_0126s0080 40.909 418 172 9 36 421 85 459 7.72e-85 270
MS.gene03842.t1 MTR_8g091650 49.286 280 131 3 199 468 5 283 8.61e-85 263
MS.gene03842.t1 MTR_8g091650 49.117 283 133 3 196 468 75 356 1.86e-84 265
MS.gene03842.t1 MTR_5g060950 46.624 311 153 5 167 465 37 346 2.43e-84 265
MS.gene03842.t1 MTR_8g091650 49.117 283 133 3 196 468 111 392 8.80e-84 265
MS.gene03842.t1 MTR_3g073560 46.349 315 155 5 167 470 38 349 3.57e-82 266
MS.gene03842.t1 MTR_3g044820 50.847 177 72 3 183 344 32 208 4.63e-58 191
MS.gene03842.t1 MTR_1g111320 36.842 171 86 4 93 249 37 199 6.51e-18 83.2
MS.gene03842.t1 MTR_1g090370 33.537 164 92 4 288 450 70 217 7.61e-18 83.2
MS.gene03842.t1 MTR_8g094690 24.895 237 139 5 257 455 12 247 4.06e-15 75.9
MS.gene03842.t1 MTR_7g068860 23.288 219 148 4 256 458 5 219 2.94e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03842.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 533
MS.gene03842.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 533
MS.gene03842.t1 AT1G08320 56.262 503 191 9 1 496 1 481 0.0 533
MS.gene03842.t1 AT1G08320 69.255 322 95 3 178 496 37 357 3.65e-163 466
MS.gene03842.t1 AT1G08320 69.255 322 95 3 178 496 37 357 3.65e-163 466
MS.gene03842.t1 AT5G06839 47.258 383 162 5 127 469 34 416 1.68e-108 329
MS.gene03842.t1 AT3G12250 55.137 292 119 2 189 468 12 303 2.98e-108 324
MS.gene03842.t1 AT3G12250 53.642 302 128 2 179 468 29 330 3.48e-108 325
MS.gene03842.t1 AT3G12250 53.642 302 128 2 179 468 29 330 3.48e-108 325
MS.gene03842.t1 AT3G12250 53.642 302 128 2 179 468 29 330 3.48e-108 325
MS.gene03842.t1 AT3G12250 53.642 302 128 2 179 468 29 330 3.48e-108 325
MS.gene03842.t1 AT5G06839 52.308 325 127 3 173 469 135 459 4.92e-108 329
MS.gene03842.t1 AT3G12250 53.074 309 133 2 172 468 16 324 5.35e-108 324
MS.gene03842.t1 AT5G06950 55.932 295 112 4 189 468 39 330 5.92e-108 324
MS.gene03842.t1 AT5G06950 55.932 295 112 4 189 468 39 330 5.92e-108 324
MS.gene03842.t1 AT5G06950 55.932 295 112 4 189 468 39 330 5.92e-108 324
MS.gene03842.t1 AT5G06950 55.932 295 112 4 189 468 39 330 5.92e-108 324
MS.gene03842.t1 AT5G06950 55.932 295 112 4 189 468 39 330 5.92e-108 324
MS.gene03842.t1 AT5G06839 47.135 384 162 6 127 469 34 417 5.26e-107 325
MS.gene03842.t1 AT3G12250 53.770 305 123 3 179 468 54 355 6.41e-107 323
MS.gene03842.t1 AT5G06960 53.472 288 122 2 193 468 43 330 8.33e-100 303
MS.gene03842.t1 AT5G06960 53.472 288 122 2 193 468 43 330 8.33e-100 303
MS.gene03842.t1 AT5G06960 53.472 288 122 2 193 468 23 310 1.80e-99 302
MS.gene03842.t1 AT1G22070 50.462 325 143 5 158 469 64 383 6.70e-97 298
MS.gene03842.t1 AT1G68640 53.898 295 116 4 191 468 161 452 5.99e-95 295
MS.gene03842.t1 AT5G10030 51.237 283 128 2 196 468 80 362 3.34e-93 288
MS.gene03842.t1 AT5G10030 51.237 283 128 2 196 468 80 362 3.34e-93 288
MS.gene03842.t1 AT5G10030 51.237 283 128 2 196 468 80 362 3.34e-93 288
MS.gene03842.t1 AT5G10030 51.237 283 128 2 196 468 80 362 3.34e-93 288
MS.gene03842.t1 AT5G10030 51.237 283 128 2 196 468 80 362 3.34e-93 288
MS.gene03842.t1 AT1G77920 49.342 304 146 4 168 468 68 366 7.96e-92 284
MS.gene03842.t1 AT5G65210 50.530 283 130 2 196 468 14 296 2.97e-91 280
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT5G65210 49.342 304 141 4 175 468 66 366 8.50e-91 281
MS.gene03842.t1 AT3G14880 27.094 203 127 5 267 450 17 217 1.22e-14 73.9
MS.gene03842.t1 AT3G14880 26.190 210 127 6 267 450 17 224 3.07e-13 70.1
MS.gene03842.t1 AT1G58330 26.966 178 117 4 294 458 46 223 2.59e-12 67.0

Find 109 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGATGTTTCATTGTTAT+TGG 0.193670 4.1:-44884273 MS.gene03842:CDS
TTCGAGCCCTTAGCTCTCTT+TGG 0.224036 4.1:-44884233 MS.gene03842:CDS
AGCCAAAGAATTGGAGAAAT+TGG 0.227335 4.1:-44892341 MS.gene03842:CDS
AACCAATTTCTCCAATTCTT+TGG 0.257495 4.1:+44892339 None:intergenic
TTCACCTTATTAAAGGCATT+TGG 0.259017 4.1:-44886639 MS.gene03842:CDS
CACTTGAAATGTTTCCTTCA+TGG 0.261357 4.1:-44891631 MS.gene03842:CDS
TATTTAATAGGGACTATTCT+TGG 0.280376 4.1:-44889439 MS.gene03842:intron
GGCGGGGCTGCAGGCATCAT+TGG 0.289870 4.1:-44886755 MS.gene03842:CDS
AGAGCTTAGGGCGGGGCTGC+AGG 0.299823 4.1:-44886764 MS.gene03842:CDS
CTATTCTTGGGTTGTGGTGG+TGG 0.320708 4.1:-44889426 MS.gene03842:CDS
TTGAAGGTCTTGTTCAAGAT+TGG 0.333324 4.1:+44889572 None:intergenic
GAAAAGCCGTCTAAGGAAAA+AGG 0.335701 4.1:-44889853 MS.gene03842:intron
TCAAGTCAACATGTCCCTTA+TGG 0.339592 4.1:-44892299 MS.gene03842:CDS
ATCTATTTGTTGCTGAGCTA+AGG 0.343177 4.1:+44886391 None:intergenic
GTCCCTTATGGAGTTCTTCA+TGG 0.344846 4.1:-44892287 MS.gene03842:CDS
GAAATTGGTTTGTCTGAATC+TGG 0.352288 4.1:-44892326 MS.gene03842:CDS
TCACCTTATTAAAGGCATTT+GGG 0.365420 4.1:-44886638 MS.gene03842:CDS
AGCTAGAGTCAAGTAGATTA+AGG 0.367166 4.1:-44889599 MS.gene03842:CDS
TCGAGCCCTTAGCTCTCTTT+GGG 0.367721 4.1:-44884232 MS.gene03842:CDS
TTGAAGAAACAATACATTAA+GGG 0.369881 4.1:+44892245 None:intergenic
GGAGGAGAAAGTACTGATTC+AGG 0.370655 4.1:-44891038 MS.gene03842:CDS
CTACAACTCTTGGTGTTTGT+TGG 0.374995 4.1:+44891597 None:intergenic
ATTGTTATTGGAGAGTATTA+TGG 0.381252 4.1:-44884261 MS.gene03842:CDS
GGTGTTTGTTGGAATCTAAT+TGG 0.381407 4.1:+44891608 None:intergenic
CCTGTGAGCGTGCTCTTTGA+AGG 0.383069 4.1:+44889556 None:intergenic
GAAGAGGCAATTGTTCTTCA+AGG 0.388401 4.1:-44892056 MS.gene03842:CDS
GCGGGGCTGCAGGCATCATT+GGG 0.388702 4.1:-44886754 MS.gene03842:CDS
CTGCTGAGAGACCCTTCATT+TGG 0.391421 4.1:-44886609 MS.gene03842:CDS
TTAGCTCAGCAACAAATAGA+TGG 0.392743 4.1:-44886389 MS.gene03842:CDS
AAGCCCAAATGCCTTTAATA+AGG 0.402887 4.1:+44886635 None:intergenic
ATTTAATAGGGACTATTCTT+GGG 0.408206 4.1:-44889438 MS.gene03842:intron
TGTTGTTGTCTTAGGAATCA+AGG 0.409085 4.1:-44892104 MS.gene03842:intron
TAGGGACTATTCTTGGGTTG+TGG 0.414870 4.1:-44889432 MS.gene03842:CDS
GCAACAAATAGATGGGATAA+TGG 0.418774 4.1:-44886381 MS.gene03842:CDS
CTGCAAAGAAAAGCCGTCTA+AGG 0.419091 4.1:-44889860 MS.gene03842:CDS
CAAATGAAGGGTCTCTCAGC+AGG 0.422559 4.1:+44886610 None:intergenic
AACGACACATGGCAGAGCTT+AGG 0.430723 4.1:-44886777 MS.gene03842:CDS
TGATCAGACACTGAGACGTT+TGG 0.430811 4.1:-44889898 MS.gene03842:intron
ACATAGGGAGGTTCAAAATC+AGG 0.436312 4.1:-44891059 MS.gene03842:intron
TGCATGGCTAGCCAAAGAAT+TGG 0.437865 4.1:-44892350 MS.gene03842:CDS
GCAGCAGCTTCAACAGCAAC+AGG 0.443356 4.1:-44890931 MS.gene03842:CDS
GAAGGAGGTGGCTGTTAAAT+CGG 0.447974 4.1:-44886668 MS.gene03842:CDS
GCCGGAGGGCCTGTCGTTGA+CGG 0.453170 4.1:-44886275 MS.gene03842:CDS
ACGACACATGGCAGAGCTTA+GGG 0.454236 4.1:-44886776 MS.gene03842:CDS
ATTCCATGAAGAACTCCATA+AGG 0.455812 4.1:+44892284 None:intergenic
TAGCATTGTGGAGCTGTTCA+TGG 0.458214 4.1:+44886312 None:intergenic
GTAGATGTTGACACAACAAT+TGG 0.464222 4.1:-44886417 MS.gene03842:intron
GCAGAAGAAGCTCTCTCTAA+AGG 0.465384 4.1:-44886335 MS.gene03842:CDS
TTTGCAATTCTGTGGTTGCT+TGG 0.468162 4.1:+44883390 None:intergenic
AGATGGTTGCCGCCATGGCC+AGG 0.469755 4.1:-44886244 MS.gene03842:CDS
TAAGGGACATGTTGACTTGA+AGG 0.470369 4.1:+44892302 None:intergenic
AACGACAGGCCCTCCGGCGA+TGG 0.470647 4.1:+44886280 None:intergenic
TCTATTTGTTGCTGAGCTAA+GGG 0.474426 4.1:+44886392 None:intergenic
AGCCAAATCACCTCATGAAA+AGG 0.477424 4.1:-44890853 MS.gene03842:intron
ACTGATGATCGCTTAAGAAC+AGG 0.478092 4.1:-44890900 MS.gene03842:CDS
AATTGTAGGCTGATAATTTG+AGG 0.478296 4.1:-44884344 MS.gene03842:intron
GGACTATTCTTGGGTTGTGG+TGG 0.490197 4.1:-44889429 MS.gene03842:CDS
GCCGTCAACGACAGGCCCTC+CGG 0.490375 4.1:+44886274 None:intergenic
GCAACAGATGGTTGCCGCCA+TGG 0.491703 4.1:-44886249 MS.gene03842:CDS
AACATTTCAAGTGTCGCAGC+TGG 0.494223 4.1:+44891641 None:intergenic
TAACAGCCACCTCCTTCAAT+CGG 0.494670 4.1:+44886674 None:intergenic
TGTTGCATGCCGTCAACGAC+AGG 0.495188 4.1:+44886266 None:intergenic
GTTGTTGTCTTAGGAATCAA+GGG 0.496590 4.1:-44892103 MS.gene03842:intron
TGGAATCTAATTGGCCATGA+AGG 0.502306 4.1:+44891617 None:intergenic
GAAACCACCTATCCAAATGA+AGG 0.507472 4.1:+44886597 None:intergenic
GTGAGAGAAGCTACAACTCT+TGG 0.508120 4.1:+44891587 None:intergenic
CACATGGCAGAGCTTAGGGC+GGG 0.522372 4.1:-44886772 MS.gene03842:CDS
AGACCCTTCATTTGGATAGG+TGG 0.525909 4.1:-44886601 MS.gene03842:CDS
CCAACTATGTCGAATATTGA+CGG 0.527349 4.1:-44884307 MS.gene03842:CDS
ATCAAGATAAGAAATGATGA+AGG 0.535918 4.1:-44892032 MS.gene03842:CDS
AATATTGACGGTTCGTCAAG+CGG 0.542904 4.1:-44884295 MS.gene03842:CDS
ACATAAGGAATGGTCAAAGA+TGG 0.545520 4.1:+44891560 None:intergenic
AGCAACCACAGAATTGCAAA+TGG 0.553522 4.1:-44883387 MS.gene03842:CDS
TTGAAGCCCAAAGAGAGCTA+AGG 0.553832 4.1:+44884226 None:intergenic
AGAAAAGACACTTGATCCAA+AGG 0.554531 4.1:-44890121 MS.gene03842:intron
ACATGGCAGAGCTTAGGGCG+GGG 0.559771 4.1:-44886771 MS.gene03842:CDS
TTAATTAGGTCTTACTCTCG+TGG 0.563614 4.1:+44884201 None:intergenic
GAGAGACCCTTCATTTGGAT+AGG 0.567532 4.1:-44886604 MS.gene03842:CDS
GAGAATGTTTACATAAGGAA+TGG 0.568455 4.1:+44891550 None:intergenic
CCTTCAAAGAGCACGCTCAC+AGG 0.569093 4.1:-44889556 MS.gene03842:intron
ATTGTTGACACCATCGCCGG+AGG 0.572201 4.1:-44886290 MS.gene03842:CDS
TAGCTCAGCAACAAATAGAT+GGG 0.572294 4.1:-44886388 MS.gene03842:CDS
CCGTCAATATTCGACATAGT+TGG 0.573495 4.1:+44884307 None:intergenic
TGAAGCCCAAAGAGAGCTAA+GGG 0.583591 4.1:+44884227 None:intergenic
TTGTTGACACCATCGCCGGA+GGG 0.591648 4.1:-44886289 MS.gene03842:CDS
CTTGAGAAATGACTATGAGA+AGG 0.592625 4.1:+44883359 None:intergenic
ATACATTAAGGGTGATGTTG+AGG 0.596085 4.1:+44892256 None:intergenic
GCTATTGTTGACACCATCGC+CGG 0.599785 4.1:-44886293 MS.gene03842:CDS
AAATGAAGGGTCTCTCAGCA+GGG 0.599978 4.1:+44886611 None:intergenic
TTCCATGAAGAACTCCATAA+GGG 0.601892 4.1:+44892285 None:intergenic
AAGATTGGAAATCCTGGCCA+TGG 0.602327 4.1:+44886232 None:intergenic
GAATTGAGAGTGATCGTGGA+CGG 0.616655 4.1:-44886724 MS.gene03842:CDS
TAATGAATTGAGAGTGATCG+TGG 0.617953 4.1:-44886728 MS.gene03842:CDS
AAAGAGAGCTAAGGGCTCGA+AGG 0.622342 4.1:+44884235 None:intergenic
CGTTGACGGCATGCAACAGA+TGG 0.625586 4.1:-44886261 MS.gene03842:CDS
TTGAACCATTTGCAATTCTG+TGG 0.626591 4.1:+44883382 None:intergenic
AGAAGAAGATCAACGACACA+TGG 0.630083 4.1:-44886788 MS.gene03842:CDS
ACATACCGTGATGAGTTCTG+AGG 0.636962 4.1:+44886570 None:intergenic
AAACCACCTATCCAAATGAA+GGG 0.649407 4.1:+44886598 None:intergenic
ACACATGGCAGAGCTTAGGG+CGG 0.653821 4.1:-44886773 MS.gene03842:CDS
CATACCGTGATGAGTTCTGA+GGG 0.662424 4.1:+44886571 None:intergenic
TGGTGTCAACAATAGCATTG+TGG 0.671299 4.1:+44886300 None:intergenic
AATGAAGGGTCTCTCAGCAG+GGG 0.672989 4.1:+44886612 None:intergenic
AGGAGCTGCAATGTTTGACA+TGG 0.673799 4.1:-44886827 MS.gene03842:CDS
TAGGGAGGTTCAAAATCAGG+AGG 0.685440 4.1:-44891056 MS.gene03842:CDS
GGTGGTGGCAATATAAGCCC+TGG 0.687235 4.1:-44889411 MS.gene03842:intron
TTGACATGGAGTATGCAAGA+TGG 0.703314 4.1:-44886813 MS.gene03842:CDS
CAGACCCTCAGAACTCATCA+CGG 0.712668 4.1:-44886575 MS.gene03842:intron
ATTGGAAATCCTGGCCATGG+CGG 0.718776 4.1:+44886235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.1 gene 44883352 44892369 44883352 ID=MS.gene03842
chr4.1 mRNA 44883352 44892369 44883352 ID=MS.gene03842.t1;Parent=MS.gene03842
chr4.1 exon 44892260 44892369 44892260 ID=MS.gene03842.t1.exon1;Parent=MS.gene03842.t1
chr4.1 CDS 44892260 44892369 44892260 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44892024 44892112 44892024 ID=MS.gene03842.t1.exon2;Parent=MS.gene03842.t1
chr4.1 CDS 44892024 44892112 44892024 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44891562 44891683 44891562 ID=MS.gene03842.t1.exon3;Parent=MS.gene03842.t1
chr4.1 CDS 44891562 44891683 44891562 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44890854 44891075 44890854 ID=MS.gene03842.t1.exon4;Parent=MS.gene03842.t1
chr4.1 CDS 44890854 44891075 44890854 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44890122 44890166 44890122 ID=MS.gene03842.t1.exon5;Parent=MS.gene03842.t1
chr4.1 CDS 44890122 44890166 44890122 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44889854 44889913 44889854 ID=MS.gene03842.t1.exon6;Parent=MS.gene03842.t1
chr4.1 CDS 44889854 44889913 44889854 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44889557 44889634 44889557 ID=MS.gene03842.t1.exon7;Parent=MS.gene03842.t1
chr4.1 CDS 44889557 44889634 44889557 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44889412 44889451 44889412 ID=MS.gene03842.t1.exon8;Parent=MS.gene03842.t1
chr4.1 CDS 44889412 44889451 44889412 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44886576 44886847 44886576 ID=MS.gene03842.t1.exon9;Parent=MS.gene03842.t1
chr4.1 CDS 44886576 44886847 44886576 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44886214 44886435 44886214 ID=MS.gene03842.t1.exon10;Parent=MS.gene03842.t1
chr4.1 CDS 44886214 44886435 44886214 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44884216 44884358 44884216 ID=MS.gene03842.t1.exon11;Parent=MS.gene03842.t1
chr4.1 CDS 44884216 44884358 44884216 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
chr4.1 exon 44883352 44883439 44883352 ID=MS.gene03842.t1.exon12;Parent=MS.gene03842.t1
chr4.1 CDS 44883352 44883439 44883352 ID=cds.MS.gene03842.t1;Parent=MS.gene03842.t1
Gene Sequence

>MS.gene03842

ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTGTCTGAATCTGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATCACTACCTCAACATCACCCTTAATGTATTGTTTCTTCAATAATTTCTCCATCTTAGTGCTACTAACACTTATACTTTTTTATTATCAAACATAATATATTCTTTCTTAAATTATTTTTTTGATAAAGTTGCTTTAATTCAATTTCTTCATTTATTTTTGTTGTTGTCTTAGGAATCAAGGGTCTGCTTTTAATTTTGGAGAGCTAGAAGAGGCAATTGTTCTTCAAGGAATCAAGATAAGAAATGATGAAGGAAAAGCATGTATGGTTTTTTTTTTTCTTTCTTCTCTTCCTTTTTCCATGGTTTTTTTATTTATTTATTTATTCTTCATGTTACATAAGCATAAACCAACTCTTTCCAAAAAGCATATAGAAGAAAAAAGAGTGTTGGAAGAAAAAAAGTTTTGAGTAGGAAAAGTTACCATTTTGAGTAGAATAATGATGATGAAGCAATAAAACTAACTTCCCTTGCATGACTCCAAAAGAAGGATTAGGTTTCATCCACCTTTTGATATTGATATATAATTGAAAATTTCATATAGTTCTATATTATTATTTGGTTATTATGTTTTGAGATTTTTGTTTTTGTGATTTTCTTGCAGCTGCTTTATATACAAGCAAACCAGCTGCGACACTTGAAATGTTTCCTTCATGGCCAATTAGATTCCAACAAACACCAAGAGTTGTAGCTTCTCTCACTTCTCCATCTTTGACCATTCCTTATGTAAACATTCTCATTCTTTACACCTAACAACTTTTAGTACTACTACTTCAAATCAATAAAATATCAATTTTTTCCTTGCTTCTGTTGTCCGATTGAATCGACAACAAGTTTGACAAAATCACATGTTAAAACTTCGAAGTGTAGTAATCATAAAATTGTGATAGCACATCGTGATTCAATCAAACTTACAGCTAATTCAATCATGCACTAAATTTAGACGTCAAAACAAGTCTAATATTATTTTAACATATGAAGTACAGATACTTCTCATATTAGACGTGTCCTGGTGTCAGATATGTATCATGTTCGACATCGATACATATGATTATATTGAATTATGTAATTTTCTCAAATTATTATCAGTGTCGACGTGTCCGTGTCTGTGCTTCATTTTAACAAATATTTTGCAAAAAGGAATGTAAAAAATAATGAAATTTTGGTCTTGGACATGAAAATGAGGTTTTTTTGGTGTATTTTGAAACATAGGGAGGTTCAAAATCAGGAGGAGAAAGTACTGATTCAGGATCAACAGAGCTACAATTTGAAACAGATTCACCAATAAGTGTAAAAGCATCTTCATCAGATCATCATAATCATGCTTTTGATCAGCAGCAGCTTCAACAGCAACAGGAGACAGCTACTGATGATCGCTTAAGAACAGGCACATCAACACAGAATCAATCAAAAGCCAAATCACCTCATGAAAAGGTTTTGTTAATTTAATGTACTCTTTGTTTTTCACTGTTGTTTAGTTAATCTCTCTCTCTTTTTGTCTCCTAAACCAAGACAATGCTTGGTCTCTTTAATGCAATTATTAACTCTCTCTCTGCACAAAAGAACAACACAGATCCCAACAACTCTCAGAAAATGAAGATAACACTGAGTTTTTCTGATGAATCTCTGACATGAAATATGGAAGGAGAGAGAGAGAGAGAGATATATGAACATGTAAAAAGAAAACAAAGGGAGAGAATCTTCTAAGTCATTATCAATGTGACCCTTTTTTATTAATTTTAACTAACATACACCTACTTCACTTGTGTTTTAATCCAAGTAAATTAAATTTACTATCCATGTCATATTGATGAATACATTTGCATGGCTCCTCAAGAAATGTTTCCTTAAAATGCTGTGACCACTTAACATTCATATAATAATATTAATCTAGCATTATTTATTGGTTGAGACTTGATGAAGTGAATCTAATATCTTTATGAGTTTGAATTTGAGTTATGATAGTTAGCAAATTAATTCATCACCCCATATAATTTATTTAGTTCTTAGAAAGCTGAGTTATTGCTATGAGTACATTTTTTTTAGTGCGATGTTGCCCTATATGAAATAATAATATATAGTAATCCATATTAATTTCTCTTGTGGTTGTTTTTATTGCAGAAGAAAGGAGCTGTTTCCACATCAGAAAAGACACTTGATCCAAAGGTTTTATTTTAAATATCATAATAATTCATACATACATTTTTTTTTTTGAAACAATAATTCATACATACATGTTTATCTATAAGATAACATATAATATATATTCCCCTAAAAAAATATAATATATATTCTAAGGTATCTTTTTTTTTTTTTTTTACCATTAATTAAGAGGTAAGTATAGTCAAGAATTAATTGTTTGATTTGTGATCAGACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGCCGTCTAAGGAAAAAGGTGTGTGTTCCATTACACTTTGTGCAGTACCACCCACAAATACTATTATTCATCTTAATTATTATAAGCCATTACAATTTTTTTTTGTTGAAAGAATTACAATGTTATGTTGAGCTTTGCATATATTATAATGAAACGTGTACTATATATGAAATTAATTAATATTATGGATGGTGTGTGTATCTTTTTATTAATTAACTTTATTTATTAATGAAACAGGCTTATGTACAGCAGCTAGAGTCAAGTAGATTAAGGTTATCCAATCTTGAACAAGACCTTCAAAGAGCACGCTCACAGGTATACTCATAAATTTGAAAATTTAAAATTACAGCATAAAGATTTTATTAAGTACTTTTCTATAGTCATGATTATTATTATAATTTATGGTGTTTTATTTAATAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCTGGTAAGTTTTGCTCTTTTTATTGATTTTCAAAATACAGTTTCACTTTCTAACGAGGCTTACATAGCATACTGTTATCTTTGGTGTCTATATTCTTAATGTATGTTTGGTATTATAGAGGGTCATGTGATTCTCTTATATGTATCGTGATACCAAACACATGTTCAAAATATTATTGAACACGAGCAAACTAGCACAAAATTTAGACTTTAAAATTTACGGATGCTATGGTGATTTATTCAAACCAACTTGTATTTAAATATGTACTAACTAAGTTCTTAGGTTCTCCGTTGAATGTCTCAACCTCAATTTGAAGTGAGTGAACATAGTTTTCAAGATATTTAGTTTATCGTTTAATATTTTCTAATTATACAAAGATATTAAGCAAGAACAAAACAATTCTTAATAATCGAGTTCATGCAATGACCCATGAACCAAGCAGGGGCGGATCCAGACTTTAGGTATATGTGGAGCTAAAATTTCAAATAAATAATAAAGCAAACTAAATGAATTTTTTTTAATCGACAAATATTATTCACATCGAGATTGTGTAAGAAACACAAAAACTCGCAGATCAAATAGTCTAACATACCTCATTGTTTGCACTTATTTGTTTCCACAAGTTTTGCATAAATATCTGAAAGCCCTTTCAACTTTGCAAATTTTGGGTCAGATAGAACATTTGTAACATAATTCTTAAGTTGAGTGTGTAACGTCACTTCCGACACATCTATAAAATCATTTGGATAAAACTCAATAATCCTCAATAATTCTTTCACATCAAAAGTTGCAAATGACTTTGCGGAACTAAGGGGGAAGGAGAAAAGAGAGAGTTATTTACCAAGTCACTTCTTTTATGTTTTATCAATTATAACAACAAAAAAAAAGGAAAAAACATGTGGAGCTATAGCTCCACATATCTCCTAAGTGGATCCGCCCCTGGACCCAAGAGAACGTAGTTGGGTCAAGTGTTATAAGGATTGTGAGTTCCACCTGTTATCGAGTCATCATTTTTTAGAAGGGTTTTGATAAATTTATTAATGATGAGTCATCAATTAATTAAAATATGTCAAATCTATACATAAAAACTTAGAGATGGAATCACTATCAAGATTTGTAAGAATTAAAGGGTTTTAGAGTAGCTTAGTCTTAGTTATAGGCTATTCTAAAACCATTTTATTTTTGCATACCCTTGGTAGTGACTGCATTAACTTGTTTATTATTTATAGCTTTGATGGTTCTGATTGACAAATAACTCATCTATAATGTAACTACTAAGATCTTCTACCAAATGGTGTCTCATCAACTAATGAGATTCAGAATTTTAAAACACCGGAACTAAGTACATTCGTTCAATCTCATCTTGGATCATTATAGTTCACCACTACGAGTAGTGTTTGTGGAAATTAAAATGAAAATCAGTCATTTAAGTTTTTTATAAATCAACAAATTTCAAATTTTATTTAAACGTGACACCTGAGGAAACATAACCCGATTACAAATAAGGCACTGTATATATGCGGTATACCTCAAAAGAGAACACAAAAAACCATACAGTATCCACCACCAATGGCCATTGTGCCTTTCATCCAGAACAATATCCACCACCAACGGACATTGCGCCTTTCATCGGGGAAAACACATAACCGAAGTGCTGCAGAAAAAAGAACAGCAGCAACCCAACACAACAGAACAACAAATAAAACGCCACCCAGCCAACCTTAAAAATGTCAAAACAGCTTTACATAAAAAAGTTGACCTCTAAACTGCGGCTCCCTTGCCCGTCATCTTTCACAACCATTCATCAGATTGATTCCAACACCATTCAAAATACAAACACGTTAGAATTTTAAGTCTGCTCAAACTCCAACACCAAGATAACACCTTAATTTCCTCCGGTATATGATAAAGAAAAGTGCAATTAACAATCTAAAAAGATAAAGAAAAGTCCAATTTTGAATGATTTTTTATAACGGTTCTCATCAATCTAAAATAAAATGTGTGAGAAAATAGTTATGATCAATTAACATATTCTTGTTCTAGTTTCTCTTATTTTAAAAATATTGATATGTTACATGCCTTAAAAAATAAGACAACTCTTTGTAGAGATTGTACATAAAGCCTAAAATCTAGTTTTTATAAATAAACGATAAATGGAGTAAATTTGGACTCAACTTATGTATGCTTCAACTTTTCAACAGATTATTGACATGGTATCTATAATTTCATCTCTAATTTTTTATTTCATCATTAACTTTTATTGTTTCAACGTATGAAGTAAAATACAAAATTCGTCTCTAATTCAATCACCAAGTGTTAGAAATGGAAAATTTGATAATCAAATCCATTTTTAATTTTCCTCTAAAAAAACTCAACTTTTAATTAGTTATAGCTATAGCAACTAGTTCTAAGTGTAAGTCCTCGTGAGCTTAGCTCAGTTGGTTTGGACAATGCATAATACATGCAAGGTCCGGGGTTCAAACCCCGGCCACAACCAAAAAAAAACTAGTTCTAAGTGTAAGTGTGTTATTTTCCATGGTACAATAGAATCTTTATTGTTGTTGCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTAGAAGAAGATCAACGACACATGGCAGAGCTTAGGGCGGGGCTGCAGGCATCATTGGGAGATAATGAATTGAGAGTGATCGTGGACGGATATCTTTATCATTACGACGAGCTTTTCCGATTGAAGGAGGTGGCTGTTAAATCGGATGTTTTTCACCTTATTAAAGGCATTTGGGCTTCCCCTGCTGAGAGACCCTTCATTTGGATAGGTGGTTTCAGACCCTCAGAACTCATCACGGTATGTATCTATGCATTCACATTGATATAAATGTATTATATGATATGATTTTAATACTCAATGTATAATAATATGATAATTTTCTTAGATTTTTTGCCAAGATTAATGGAATGATTAATTATTATTTTTTTTTTGGGTAGATGTTGACACAACAATTGGAGCCCTTAGCTCAGCAACAAATAGATGGGATAATGGAGCTGAATACTTCATCATTTCAAGCAGAAGAAGCTCTCTCTAAAGGCCATGAACAGCTCCACAATGCTATTGTTGACACCATCGCCGGAGGGCCTGTCGTTGACGGCATGCAACAGATGGTTGCCGCCATGGCCAGGATTTCCAATCTTGAAAAATTTGTTCATGAGGTAAACAATTTATATCTATAATGAGTTCAGATATACATATTAATTATTGTAACCCTAAATCTTCCTAACATATACCTAAAAAAATGGTTTCAAAAGTGAACCAAACTATTTTTATTGAAACATCATATCATATACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGAATATTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTAATTATTTCTTTACATACATGCCCCTATTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACACTCTCTCTGAAAGGATAAAATTGTAAAACCAATAGTAATTACAAACATATTTAATACAAATATCCACTATCTTAATTCCCGTTATTTTTTAAAAAGGGTCTTATAATTAGGGACGGAGGTAGTACTTTTTGACAACACATTTTTACTAAAACATGTAGTATATATACATGTCATATAAAGTAACACATTTTCAATTTGACCATCGTAGAGACTAGATAGTCTCTCTTCATGCGTTTATGTCAAAATTATATGTGAGCTCATTATACATGACTTCTCCATCCCCTAGTTGGTCCAAGAAACCATGTTTGAAAATGGATTGGAAACCATGATCAATTTCGTGTTTGCATACAAATATGGGTTATCTTAATCATTTTAAGGATCTCAAATTTCTCTAGGAGAAAAAAAGATCATCTCAAATTATTTAACATATATAAATGCCACACATTAATTAATTAAAAACTGTAATATGAGATATGTCATAATTCTAATAGCTGAAATGTTACTTTTTAGTCCAATCAAAATGTTTCCTTTGCTCATTCTTCTATCCAACATACATATGCATGTTTGCGCCGCAATTCTACCTTGTCTTTTTACGTTGTACAACTTGTGATTACCTCATATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGTCAAAGTTTGTTTATATAATACTAATAATATACCAATCCTTACACATTTGACAGCAGTTTCATATCTGCATTTAGTTTAAAATCGATCTATCTATATATTGCAATTTGCAACAAGCTATGATCAAAGTAATCCATTCAATATGATTAAACTAACAATTTCTTTTAAATAATTTGTTTGACTTTAAATGTACCTACTACTTGTTTGACATGTACGTTTTTTTTGTTTTGTTTTCAAACAAGACATGTACGTCTTGGTAAGTATATAGATTCGTTAATTATTTCATTAATTAATATTGTCAATTTTTGGAGACTTTAGTTTATTATTGCTAGGTTATATCTAGCTACTAAGTGCATGAATGTTAATCAAAACATTGAGGGCCTAGTATTTGATGTAATTTTTCTATCTTAAAATGTTTCAATCAAAAGTTGGTATAAGATAGAGATGGCTGGATCGATGTATATAATAACACTAGGCATACTTATAATCATCAAGATTTTAATTAAAAACCAAATTGACAAATGATTTCACATTAATTAAATTCCAGTAATTTATAAGTTAAAAACTACTATATTATATCATATTATTTAAATGTATTCGAATCAGTCTAAGACAAGCTGATCAAATTCAACCCCTTTGATAGCATGATGTTCTTGGCCATATGTGTTAGTCCTAGATTAGGGACCCATTCATAGGGTAGATAGGGTTCGATTATTCTACTTTTATATTAATTTTATACTTGATTATTGTTTTCTAAACTTACTAATTGTCTTCTTGCTTAAGTATTAGTATTAGATAATTATTTCTCACTCAATTATTTATATATTTCATGTTTCTAAATTAATTGTAGGCTGATAATTTGAGGCAACAAACTCTTCACCAACTATGTCGAATATTGACGGTTCGTCAAGCGGCAAGATGTTTCATTGTTATTGGAGAGTATTATGGACGCCTTCGAGCCCTTAGCTCTCTTTGGGCTTCAAGACCACGAGAGTAAGACCTAATTAATACCAACTATCGAGTATTAAATGATTTTCCCTAAAAAAAACTATTAAATGATTTGATCAAAAAGAAAAAACTATCATATGTGTATTGGTACTTATGTTTTACTGAGAAAGTTTATCTATATTAAAATTATTATTAGACCTCTATATTTTTTATTTTATCAATTAACAATTAATATTCACATTATGAAAAAAAAACACTTAATAATTATGTTTAAAATCATACAAAATATTATTTGTAATTTGTTTACCGTATAATTTTTTTACCCTAATTGTATATCAAAATTAAACTCACTTTACAGACAAAAATAAATAAAATCACTCTTTAATCACAATAATATATAGTTTCTCTATTGTCCTCTCTTTAATTAATTTTATGAAAATAAGGTTTTAATTTACAAAATTAATAATAGTTAATATTTTTTTAGATTTTTAAAGCACTGACAAAATGAAGAAAAACAATTATATTTTTTTTTGAAAGAAAAAACAATTATATTTTTGAAAACAAAAAGAGAGACATATAACAAGATGATAATAAAAAAGAATGAAGATTTCAACATCTTCCTCACATTAGCATGTATATACTTGAATTAGTCAAAATATATGAAGGTTTCTTTTGGCACATGATTCAAGTTTCAACAATTAAGCTTAATCATACGTGTATCTGAATGAAAGAAAATTAAAATGAAAATTAACTTTCATATCTGCTCCATTGAAAACATTAAAAAAGTGATATCTATTAATTACTTTTTTATACATGAACAGGAACATGATCAATGATGATAACTCATGCCAAGCAACCACAGAATTGCAAATGGTTCAACCTTCTCATAGTCATTTCTCAAGTTTCTGA
Protein sequence

>MS.gene03842.t1

MASQRIGEIGLSESGPSSQHVPYGVLHGITTSTSPLMNQGSAFNFGELEEAIVLQGIKIRNDEGKASALYTSKPAATLEMFPSWPIRFQQTPRVVASLTSPSLTIPYGGSKSGGESTDSGSTELQFETDSPISVKASSSDHHNHAFDQQQLQQQQETATDDRLRTGTSTQNQSKAKSPHEKKKGAVSTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRHMAELRAGLQASLGDNELRVIVDGYLYHYDELFRLKEVAVKSDVFHLIKGIWASPAERPFIWIGGFRPSELITMLTQQLEPLAQQQIDGIMELNTSSFQAEEALSKGHEQLHNAIVDTIAGGPVVDGMQQMVAAMARISNLEKFVHEADNLRQQTLHQLCRILTVRQAARCFIVIGEYYGRLRALSSLWASRPRENMINDDNSCQATTELQMVQPSHSHFSSF