AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038477

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038477.t1 MTR_8g066310 88.235 323 30 4 1 316 1 322 0.0 536
MS.gene038477.t1 MTR_5g029470 56.397 383 100 12 1 324 1 375 1.19e-116 342
MS.gene038477.t1 MTR_3g064840 59.864 147 44 4 154 293 258 396 8.68e-47 164
MS.gene038477.t1 MTR_6g071625 55.556 153 47 6 154 301 184 320 1.30e-40 145
MS.gene038477.t1 MTR_1g021520 84.722 72 11 0 165 236 121 192 6.74e-36 131
MS.gene038477.t1 MTR_7g069660 44.737 114 59 1 131 244 36 145 1.57e-24 102
MS.gene038477.t1 MTR_0223s0040 67.241 58 19 0 169 226 17 74 6.60e-22 94.0
MS.gene038477.t1 MTR_1g112370 65.517 58 20 0 169 226 21 78 1.55e-21 93.6
MS.gene038477.t1 MTR_2g023580 67.188 64 20 1 163 226 49 111 7.81e-21 89.7
MS.gene038477.t1 MTR_2g084230 63.934 61 22 0 169 229 96 156 1.08e-19 88.2
MS.gene038477.t1 MTR_8g086410 62.295 61 23 0 169 229 110 170 1.29e-19 89.4
MS.gene038477.t1 MTR_8g086410 62.295 61 23 0 169 229 108 168 1.45e-19 89.0
MS.gene038477.t1 MTR_2g084230 63.934 61 22 0 169 229 96 156 1.76e-19 88.6
MS.gene038477.t1 MTR_7g098250 52.439 82 37 1 158 239 250 329 3.59e-19 88.2
MS.gene038477.t1 MTR_2g016220 51.807 83 31 1 169 242 88 170 9.03e-19 86.3
MS.gene038477.t1 MTR_2g016220 51.807 83 31 1 169 242 88 170 9.89e-19 86.3
MS.gene038477.t1 MTR_1g080330 47.872 94 35 2 155 236 148 239 2.03e-18 84.3
MS.gene038477.t1 MTR_1g080330 47.872 94 35 2 155 236 148 239 2.27e-18 85.5
MS.gene038477.t1 MTR_7g093030 54.412 68 29 1 172 239 214 279 2.68e-18 84.0
MS.gene038477.t1 MTR_7g115530 54.286 70 32 0 171 240 219 288 4.69e-18 83.6
MS.gene038477.t1 MTR_7g093030 54.412 68 29 1 172 239 214 279 5.58e-18 84.3
MS.gene038477.t1 MTR_7g115530 54.286 70 32 0 171 240 219 288 7.91e-18 83.2
MS.gene038477.t1 MTR_7g115530 36.641 131 72 2 171 290 219 349 1.24e-17 83.6
MS.gene038477.t1 MTR_3g450310 60.714 56 22 0 171 226 20 75 1.43e-17 80.5
MS.gene038477.t1 MTR_5g027440 69.811 53 16 0 171 223 26 78 1.59e-17 81.6
MS.gene038477.t1 MTR_8g086410 62.500 56 21 0 169 224 110 165 1.70e-17 83.2
MS.gene038477.t1 MTR_2g027860 51.220 82 38 1 172 253 51 130 2.08e-17 82.0
MS.gene038477.t1 MTR_7g115530 59.677 62 25 0 171 232 219 280 5.41e-17 80.9
MS.gene038477.t1 MTR_2g016220 49.425 87 31 2 169 242 88 174 8.07e-17 80.9
MS.gene038477.t1 MTR_7g088070 50.000 78 38 1 172 249 52 128 1.92e-16 78.6
MS.gene038477.t1 MTR_7g088070 57.143 63 27 0 172 234 52 114 2.61e-16 78.2
MS.gene038477.t1 MTR_1g053835 52.941 68 30 1 172 239 260 325 6.54e-16 78.2
MS.gene038477.t1 MTR_1g090670 62.500 56 21 0 171 226 45 100 9.77e-16 76.6
MS.gene038477.t1 MTR_6g444980 58.929 56 23 0 171 226 36 91 2.69e-15 75.9
MS.gene038477.t1 MTR_6g444980 58.929 56 23 0 171 226 36 91 2.89e-15 76.3
MS.gene038477.t1 MTR_5g041350 43.590 78 44 0 171 248 16 93 3.56e-15 75.9
MS.gene038477.t1 MTR_2g027800 60.714 56 22 0 171 226 40 95 4.13e-15 75.1
MS.gene038477.t1 MTR_7g115530 63.462 52 19 0 171 222 219 270 6.39e-15 74.3
MS.gene038477.t1 MTR_2g027800 62.264 53 20 0 171 223 40 92 7.61e-15 74.3
MS.gene038477.t1 MTR_6g032990 60.377 53 21 0 171 223 43 95 1.17e-14 74.3
MS.gene038477.t1 MTR_7g115530 66.000 50 17 0 171 220 219 268 1.30e-14 73.2
MS.gene038477.t1 MTR_2g086450 57.143 56 24 0 171 226 46 101 2.31e-14 73.6
MS.gene038477.t1 MTR_4g081710 55.357 56 25 0 171 226 18 73 2.32e-14 73.2
MS.gene038477.t1 MTR_1g053830 44.444 72 38 1 172 243 20 89 2.73e-13 65.5
MS.gene038477.t1 MTR_7g068600 54.237 59 24 1 172 227 15 73 7.85e-13 67.4
MS.gene038477.t1 MTR_1g053800 45.122 82 40 1 143 224 155 231 2.43e-12 67.0
MS.gene038477.t1 MTR_4g086835 50.000 72 34 1 165 236 269 338 4.06e-12 67.0
MS.gene038477.t1 MTR_4g113140 47.297 74 36 1 164 237 229 299 8.85e-12 65.9
MS.gene038477.t1 MTR_1g093080 32.895 152 79 4 87 238 149 277 1.54e-11 65.1
MS.gene038477.t1 MTR_4g086835 50.000 72 33 2 165 236 269 337 8.52e-11 62.8
MS.gene038477.t1 MTR_5g054300 29.851 134 69 2 90 223 143 251 9.12e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038477.t1 AT1G32240 49.856 347 111 12 1 297 1 334 1.24e-83 257
MS.gene038477.t1 AT1G32240 49.856 347 111 12 1 297 1 334 2.76e-83 257
MS.gene038477.t1 AT4G17695 43.071 267 101 9 1 245 1 238 1.77e-48 165
MS.gene038477.t1 AT5G16560 36.527 334 148 8 8 293 20 337 1.92e-45 159
MS.gene038477.t1 AT5G42630 77.333 75 17 0 165 239 100 174 1.64e-35 128
MS.gene038477.t1 AT5G42630 79.452 73 15 0 165 237 100 172 6.52e-35 128
MS.gene038477.t1 AT1G32240 60.638 94 29 2 205 297 1 87 3.70e-29 109
MS.gene038477.t1 AT2G38300 51.136 88 39 1 155 242 43 126 4.07e-22 95.5
MS.gene038477.t1 AT4G04605 65.574 61 21 0 169 229 13 73 4.12e-22 93.2
MS.gene038477.t1 AT1G14600 69.492 59 18 0 170 228 23 81 2.39e-21 91.7
MS.gene038477.t1 AT2G02060 74.074 54 14 0 170 223 29 82 4.84e-21 90.9
MS.gene038477.t1 AT2G02060 74.074 54 14 0 170 223 29 82 4.84e-21 90.9
MS.gene038477.t1 AT5G45580 48.936 94 40 2 171 256 8 101 3.26e-19 85.9
MS.gene038477.t1 AT5G45580 48.936 94 40 2 171 256 24 117 4.71e-19 85.9
MS.gene038477.t1 AT4G04580 64.286 56 20 0 171 226 15 70 1.83e-18 81.6
MS.gene038477.t1 AT2G40260 62.319 69 24 2 163 231 76 142 6.52e-18 84.3
MS.gene038477.t1 AT2G42660 46.087 115 50 5 171 276 51 162 1.20e-17 81.6
MS.gene038477.t1 AT2G01060 54.545 77 32 1 172 248 17 90 1.91e-17 81.6
MS.gene038477.t1 AT4G04555 60.345 58 23 0 169 226 13 70 3.93e-17 76.3
MS.gene038477.t1 AT4G28610 60.606 66 23 2 172 236 227 290 7.93e-17 80.9
MS.gene038477.t1 AT3G12730 62.500 56 21 0 171 226 24 79 1.41e-16 78.2
MS.gene038477.t1 AT3G24120 62.264 53 20 0 171 223 42 94 7.05e-16 77.0
MS.gene038477.t1 AT3G24120 62.264 53 20 0 171 223 42 94 7.30e-16 77.0
MS.gene038477.t1 AT5G29000 52.778 72 34 0 172 243 233 304 7.77e-16 77.4
MS.gene038477.t1 AT3G04450 61.818 55 21 0 172 226 240 294 1.27e-15 76.6
MS.gene038477.t1 AT3G04450 41.346 104 47 1 172 275 200 289 1.76e-15 77.0
MS.gene038477.t1 AT3G04450 41.346 104 47 1 172 275 200 289 1.76e-15 77.0
MS.gene038477.t1 AT4G13640 60.377 53 21 0 171 223 38 90 1.98e-15 75.9
MS.gene038477.t1 AT4G13640 60.377 53 21 0 171 223 38 90 2.11e-15 75.9
MS.gene038477.t1 AT5G29000 63.636 55 20 0 172 226 190 244 2.16e-15 76.6
MS.gene038477.t1 AT5G29000 63.636 55 20 0 172 226 190 244 2.16e-15 76.6
MS.gene038477.t1 AT3G04450 61.818 55 21 0 172 226 240 294 2.17e-15 77.0
MS.gene038477.t1 AT5G29000 63.636 55 20 0 172 226 233 287 2.71e-15 76.6
MS.gene038477.t1 AT1G79430 58.929 56 23 0 171 226 35 90 2.90e-15 76.3
MS.gene038477.t1 AT5G06800 53.333 60 28 0 167 226 189 248 8.60e-15 73.9
MS.gene038477.t1 AT2G20400 55.224 67 30 0 172 238 233 299 1.45e-14 74.3
MS.gene038477.t1 AT2G20400 60.000 60 24 0 172 231 233 292 1.74e-14 73.9
MS.gene038477.t1 AT5G18240 55.357 56 25 0 171 226 46 101 2.17e-14 73.6
MS.gene038477.t1 AT5G18240 55.357 56 25 0 171 226 46 101 2.17e-14 73.6
MS.gene038477.t1 AT5G18240 55.357 56 25 0 171 226 46 101 2.44e-14 73.6
MS.gene038477.t1 AT5G18240 55.357 56 25 0 171 226 46 101 2.51e-14 73.6
MS.gene038477.t1 AT5G18240 55.357 56 25 0 171 226 46 101 2.51e-14 73.6
MS.gene038477.t1 AT3G04030 53.571 56 26 0 171 226 46 101 2.58e-14 73.6
MS.gene038477.t1 AT5G06800 53.333 60 28 0 167 226 189 248 2.58e-14 73.6
MS.gene038477.t1 AT5G06800 53.333 60 28 0 167 226 189 248 2.66e-14 73.2
MS.gene038477.t1 AT1G69580 38.889 108 60 2 171 275 35 139 2.83e-14 73.2
MS.gene038477.t1 AT3G04030 53.571 56 26 0 171 226 46 101 2.98e-14 73.2
MS.gene038477.t1 AT3G13040 61.818 55 21 0 172 226 243 297 6.10e-14 72.8
MS.gene038477.t1 AT3G13040 61.818 55 21 0 172 226 243 297 6.10e-14 72.8
MS.gene038477.t1 AT3G13040 61.818 55 21 0 172 226 243 297 6.10e-14 72.8
MS.gene038477.t1 AT2G06020 55.932 59 26 0 172 230 88 146 8.03e-14 71.2
MS.gene038477.t1 AT1G69580 41.667 84 46 1 171 251 35 118 9.67e-14 71.2
MS.gene038477.t1 AT3G04030 51.786 56 26 1 171 226 46 100 8.19e-12 65.9
MS.gene038477.t1 AT2G03500 53.448 58 27 0 166 223 229 286 1.05e-11 65.9

Find 66 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTCCCTTTCCAATCTA+AGG 0.151858 8.4:+36276079 MS.gene038477:CDS
AGTTGGATGATTTAGGATTT+TGG 0.160388 8.4:+36276013 MS.gene038477:CDS
ATTAGCTCAAGAACTGATTT+TGG 0.213448 8.4:-36276709 None:intergenic
CAAGAAGAGTTGGATGATTT+AGG 0.214915 8.4:+36276006 MS.gene038477:CDS
ATTGGAAAGGGAAGGGTTAA+AGG 0.267859 8.4:-36276073 None:intergenic
ACATGTTAAATCTCATTTAC+AGG 0.296664 8.4:+36276756 MS.gene038477:CDS
AATAATGCAATAGCAGGATT+AGG 0.301410 8.4:-36276279 None:intergenic
CTTGATGTTTGTTTGCTGTT+TGG 0.333293 8.4:-36275961 None:intergenic
CTAATCAGAAAGTGATTCTA+AGG 0.336916 8.4:-36280286 None:intergenic
TACACTGGAATTCCTCTAAT+AGG 0.345904 8.4:-36276246 None:intergenic
AAAATCAGTTCTTGAGCTAA+TGG 0.346801 8.4:+36276711 MS.gene038477:CDS
GAAGTATTTGGCTCCATGTT+TGG 0.349327 8.4:+36280260 MS.gene038477:intron
ATTTCTGCATCCAACTTAAC+TGG 0.354942 8.4:-36278453 None:intergenic
GGGTTTCTCAAACCTATTAG+AGG 0.358745 8.4:+36276234 MS.gene038477:CDS
AATGAGATTTAACATGTGAT+AGG 0.371948 8.4:-36276750 None:intergenic
CTAGCTCTTCACTTAAGCTT+TGG 0.384010 8.4:-36276212 None:intergenic
CTGATTTGCAATGATAAATC+TGG 0.389260 8.4:-36275934 None:intergenic
ATAATGCAATAGCAGGATTA+GGG 0.391896 8.4:-36276278 None:intergenic
ATAAAGAAAATAATATCATT+TGG 0.395966 8.4:+36278487 MS.gene038477:CDS
TTTCCAACAGGATGGACCTT+TGG 0.414851 8.4:-36280165 None:intergenic
TCATTTGGAGCAAATCTTCC+AGG 0.424919 8.4:+36278502 MS.gene038477:CDS
AGAAGAAGGAGCCCTTAGAT+TGG 0.430703 8.4:-36276091 None:intergenic
ATGTATGACAATGGTTCATC+TGG 0.431132 8.4:+36278372 MS.gene038477:CDS
GCTCTCACGCTGCGCTTTGA+AGG 0.432112 8.4:-36276399 None:intergenic
TAATGATCTGCCAGTTAAGT+TGG 0.461102 8.4:+36278443 MS.gene038477:CDS
CCCTTCCCTTTCCAATCTAA+GGG 0.468897 8.4:+36276080 MS.gene038477:CDS
TGGAAATGTGTCTTCTCTTG+AGG 0.477195 8.4:+36280182 MS.gene038477:CDS
AACTTAACTGGCAGATCATT+AGG 0.481195 8.4:-36278441 None:intergenic
TACAGATGATCAAGAAGAGT+TGG 0.483197 8.4:+36275996 MS.gene038477:CDS
CAAATTTAAATTAGATGTAC+CGG 0.495470 8.4:+36278201 MS.gene038477:intron
AGAGAAGACACATTTCCAAC+AGG 0.502518 8.4:-36280177 None:intergenic
TGAGAAAATAATGCAATAGC+AGG 0.508896 8.4:-36276285 None:intergenic
GATAGACCACCAGCATCATC+AGG 0.511405 8.4:+36278239 MS.gene038477:CDS
CAAAGCTTAAGTGAAGAGCT+AGG 0.513464 8.4:+36276213 MS.gene038477:CDS
ATGAGATTTAACATGTGATA+GGG 0.516911 8.4:-36276749 None:intergenic
AATGATAAATCTGGTTGTGC+TGG 0.518052 8.4:-36275925 None:intergenic
TGGTTGAAAAGAGTTGTTGT+TGG 0.519831 8.4:-36276178 None:intergenic
TCTTGAGCTAATGGATGTAA+AGG 0.520433 8.4:+36276720 MS.gene038477:CDS
AACAGGGAAGCTTGGTTGCA+TGG 0.521093 8.4:+36280138 MS.gene038477:intron
TTGGTAGTAACAGGGAAGCT+TGG 0.536028 8.4:+36280130 MS.gene038477:intron
AAGCCAAAGGTCCATCCTGT+TGG 0.539624 8.4:+36280162 MS.gene038477:CDS
GCCCTTAGATTGGAAAGGGA+AGG 0.542991 8.4:-36276081 None:intergenic
AGGAGCCCTTAGATTGGAAA+GGG 0.545169 8.4:-36276085 None:intergenic
GTGGTAGTCCAACGCATCCT+CGG 0.547370 8.4:-36276423 None:intergenic
AAAGCTTAAGTGAAGAGCTA+GGG 0.550097 8.4:+36276214 MS.gene038477:CDS
TGAGAGCTCCGAGGATGCGT+TGG 0.564823 8.4:+36276415 MS.gene038477:CDS
CCCTTAGATTGGAAAGGGAA+GGG 0.564934 8.4:-36276080 None:intergenic
GAAGCATCAAAGAGTGGTTG+TGG 0.568374 8.4:-36276309 None:intergenic
GCAAACAAACATCAAGTTGG+AGG 0.579839 8.4:+36275968 MS.gene038477:CDS
ACAGCAAACAAACATCAAGT+TGG 0.580847 8.4:+36275965 MS.gene038477:CDS
AATCACTAACCTGATGATGC+TGG 0.583542 8.4:-36278248 None:intergenic
GGTTAGGTATGAGATTGTAG+AGG 0.587027 8.4:-36276134 None:intergenic
ATGATAAATCTGGTTGTGCT+GGG 0.589384 8.4:-36275924 None:intergenic
GATTCTAAGGAGTCCAAACA+TGG 0.595029 8.4:-36280273 None:intergenic
AAGGAGCCCTTAGATTGGAA+AGG 0.598971 8.4:-36276086 None:intergenic
AAGACACATTTCCAACAGGA+TGG 0.611319 8.4:-36280173 None:intergenic
AACAAAGCGATTATGAAGAG+TGG 0.613873 8.4:-36276442 None:intergenic
CAATCTGATATGTATGACAA+TGG 0.620941 8.4:+36278363 MS.gene038477:CDS
TTGGTTGCATGGTAAGCCAA+AGG 0.634514 8.4:+36280149 MS.gene038477:CDS
TGAGATCAAAGTTGTTGCCG+CGG 0.651120 8.4:+36276373 MS.gene038477:CDS
GAAGCAGAAGCATCAAAGAG+TGG 0.673679 8.4:-36276315 None:intergenic
TTTAAATTAGATGTACCGGA+CGG 0.677447 8.4:+36278205 MS.gene038477:intron
CTGCGCTTTGAAGGAAACCG+CGG 0.685322 8.4:-36276390 None:intergenic
TTGACATAAACTCTTCAACA+AGG 0.687840 8.4:+36278418 MS.gene038477:CDS
CACTAACCTGATGATGCTGG+TGG 0.718899 8.4:-36278245 None:intergenic
AGCGCAGCGTGAGAGCTCCG+AGG 0.728362 8.4:+36276406 MS.gene038477:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATATATAAAGAG+AGG + chr8.4:36279943-36279962 MS.gene038477:intron 10.0%
!! ATAAAGAAAATAATATCATT+TGG + chr8.4:36278487-36278506 MS.gene038477:CDS 10.0%
!! ATAATACTAGTATATATTTA+TGG + chr8.4:36278547-36278566 MS.gene038477:intron 10.0%
!! TAATTTAAAAATGTGTTTAT+AGG + chr8.4:36279243-36279262 MS.gene038477:intron 10.0%
!! TATATATATTATATATTACC+TGG - chr8.4:36278523-36278542 None:intergenic 10.0%
!!! TATATATATTTTTTTTTTGG+TGG - chr8.4:36279938-36279957 None:intergenic 10.0%
!!! TTTTAAAACAACTAAAAAAA+AGG - chr8.4:36277868-36277887 None:intergenic 10.0%
!! GAAAATAGTAGATAAATATA+TGG - chr8.4:36278311-36278330 None:intergenic 15.0%
!! GTAATAAAAAATTACTTTCA+TGG - chr8.4:36276491-36276510 None:intergenic 15.0%
!! TAGTAAGAAGATTATATATT+AGG + chr8.4:36278285-36278304 MS.gene038477:intron 15.0%
!!! AATTATTAGTGTTTTGAAAA+GGG - chr8.4:36276158-36276177 None:intergenic 15.0%
!!! AATTTCCATTTTATCTTATA+GGG + chr8.4:36276680-36276699 MS.gene038477:intron 15.0%
!!! ATTGTTTTTAAATTTAGCTA+TGG + chr8.4:36277049-36277068 MS.gene038477:intron 15.0%
!!! TAATTTCCATTTTATCTTAT+AGG + chr8.4:36276679-36276698 MS.gene038477:intron 15.0%
!!! TATTTCATTTAATTTGATAG+TGG - chr8.4:36278069-36278088 None:intergenic 15.0%
!!! TTATTTTTCATTGAAGTATT+TGG + chr8.4:36280248-36280267 MS.gene038477:intron 15.0%
!!! TTTAAAAACAATTTTTGCTA+AGG - chr8.4:36277041-36277060 None:intergenic 15.0%
!! AAAACAACTAAAAAAAAGGA+TGG - chr8.4:36277864-36277883 None:intergenic 20.0%
!! AAGATTTATTGATCTAATGA+TGG + chr8.4:36278093-36278112 MS.gene038477:intron 20.0%
!! AATATGAAAATCTTAACATC+TGG - chr8.4:36279215-36279234 None:intergenic 20.0%
!! AGAACTTAAAATAACATTCA+AGG - chr8.4:36276853-36276872 None:intergenic 20.0%
!! ATAACAGTTCAAAAATAAAG+AGG - chr8.4:36280232-36280251 None:intergenic 20.0%
!! CAAATTTAAATTAGATGTAC+CGG + chr8.4:36278201-36278220 MS.gene038477:intron 20.0%
!! GTTACATAAATACTATATCA+GGG + chr8.4:36277781-36277800 MS.gene038477:intron 20.0%
!! TAACAGTTCAAAAATAAAGA+GGG - chr8.4:36280231-36280250 None:intergenic 20.0%
!! TGTTACATAAATACTATATC+AGG + chr8.4:36277780-36277799 MS.gene038477:intron 20.0%
!!! AGATGTTAAGATTTTCATAT+TGG + chr8.4:36279214-36279233 MS.gene038477:intron 20.0%
!!! ATTTCCATTTTATCTTATAG+GGG + chr8.4:36276681-36276700 MS.gene038477:intron 20.0%
!!! ATTTTATTGCACAAGAAAAT+AGG + chr8.4:36277293-36277312 MS.gene038477:intron 20.0%
!!! CTTAATTTTGACAAAAACTA+CGG + chr8.4:36276561-36276580 MS.gene038477:intron 20.0%
!!! GAATTATTAGTGTTTTGAAA+AGG - chr8.4:36276159-36276178 None:intergenic 20.0%
!!! GATGTTAAGATTTTCATATT+GGG + chr8.4:36279215-36279234 MS.gene038477:intron 20.0%
!!! GATTTTTCTTGTGTTTAAAA+TGG + chr8.4:36278333-36278352 MS.gene038477:intron 20.0%
!!! GTGTTTCATTTAGTTTAAAT+TGG + chr8.4:36278032-36278051 MS.gene038477:intron 20.0%
!!! TTTTGATGAGATAGAATAAT+TGG - chr8.4:36279729-36279748 None:intergenic 20.0%
! AAATGATAATCAACCAACAA+TGG - chr8.4:36278648-36278667 None:intergenic 25.0%
! AACTAGCAGAATAAGAAAAA+GGG + chr8.4:36280013-36280032 MS.gene038477:intron 25.0%
! AATGAGATTTAACATGTGAT+AGG - chr8.4:36276753-36276772 None:intergenic 25.0%
! AATGATAATCAACCAACAAT+GGG - chr8.4:36278647-36278666 None:intergenic 25.0%
! ACATGTTAAATCTCATTTAC+AGG + chr8.4:36276756-36276775 MS.gene038477:CDS 25.0%
! ATGAGATTTAACATGTGATA+GGG - chr8.4:36276752-36276771 None:intergenic 25.0%
! ATTGTTAACACAAAGAAAGA+AGG - chr8.4:36276514-36276533 None:intergenic 25.0%
! CACAACAAATCATATCAATT+TGG - chr8.4:36278015-36278034 None:intergenic 25.0%
! CACAATACTAAAACTAAAAG+AGG + chr8.4:36279572-36279591 MS.gene038477:intron 25.0%
! CTGCACATAAACAAATATAT+AGG + chr8.4:36278780-36278799 MS.gene038477:intron 25.0%
! GAATTTACTCAATTGATACA+GGG - chr8.4:36277502-36277521 None:intergenic 25.0%
! GTACTACTTAAAGCATATAT+AGG - chr8.4:36277559-36277578 None:intergenic 25.0%
! TAGCAACAAAGATTTATAGA+GGG + chr8.4:36279601-36279620 MS.gene038477:intron 25.0%
! TGAACTCAAACTATATCAAT+TGG - chr8.4:36277600-36277619 None:intergenic 25.0%
! TGAATTTACTCAATTGATAC+AGG - chr8.4:36277503-36277522 None:intergenic 25.0%
! TGCATATATGAAGAATTGAA+AGG - chr8.4:36279140-36279159 None:intergenic 25.0%
! TTAGAGATATCTCTTTCTTT+AGG + chr8.4:36278987-36279006 MS.gene038477:intron 25.0%
! TTAGCAACAAAGATTTATAG+AGG + chr8.4:36279600-36279619 MS.gene038477:intron 25.0%
! TTGTTAACACAAAGAAAGAA+GGG - chr8.4:36276513-36276532 None:intergenic 25.0%
!! ACAATTTTCTCCCTTAATTA+GGG - chr8.4:36277128-36277147 None:intergenic 25.0%
!! ATAGTTTGTAATGTAGTACA+AGG + chr8.4:36276971-36276990 MS.gene038477:intron 25.0%
!! CGTAGTTTTTGTCAAAATTA+AGG - chr8.4:36276563-36276582 None:intergenic 25.0%
!! CTAATTCTCTGAAAATACTT+TGG - chr8.4:36279823-36279842 None:intergenic 25.0%
!! TACAATTTTCTCCCTTAATT+AGG - chr8.4:36277129-36277148 None:intergenic 25.0%
!! TATTACTCAGATTTTGAACA+TGG - chr8.4:36278612-36278631 None:intergenic 25.0%
!! TCAAATTTCTAAAAACGAGT+AGG + chr8.4:36277198-36277217 MS.gene038477:intron 25.0%
!! TTTAAGTTTGATCGTGTTTA+AGG + chr8.4:36279540-36279559 MS.gene038477:intron 25.0%
!! TTTGTAGAGTATCATTAACA+CGG - chr8.4:36278185-36278204 None:intergenic 25.0%
!!! TGGTCTTAAAGCTAATTTTT+TGG + chr8.4:36279072-36279091 MS.gene038477:intron 25.0%
AAAATCAGTTCTTGAGCTAA+TGG + chr8.4:36276711-36276730 MS.gene038477:CDS 30.0%
AAATATTCTCTCCATGTGTT+TGG + chr8.4:36280111-36280130 MS.gene038477:intron 30.0%
AATAATGCAATAGCAGGATT+AGG - chr8.4:36276282-36276301 None:intergenic 30.0%
ACTAGCAGAATAAGAAAAAG+GGG + chr8.4:36280014-36280033 MS.gene038477:intron 30.0%
ACTATATCAATTGGATCAGT+TGG - chr8.4:36277591-36277610 None:intergenic 30.0%
AGAGAATTAAAGATTCCACT+TGG + chr8.4:36279663-36279682 MS.gene038477:intron 30.0%
ATAATGCAATAGCAGGATTA+GGG - chr8.4:36276281-36276300 None:intergenic 30.0%
ATATAATTACCCCATCATCA+TGG - chr8.4:36278886-36278905 None:intergenic 30.0%
ATATACTCTTTACTAGCTAG+TGG + chr8.4:36278904-36278923 MS.gene038477:intron 30.0%
ATCAATTTGGTTATGACTCA+TGG - chr8.4:36278002-36278021 None:intergenic 30.0%
ATCTTCAACCTCAATTTCAA+AGG - chr8.4:36276884-36276903 None:intergenic 30.0%
ATGAAAATCTTAACATCTGG+AGG - chr8.4:36279212-36279231 None:intergenic 30.0%
CAACTAAAAAAAAGGATGGT+CGG - chr8.4:36277860-36277879 None:intergenic 30.0%
CAACTAGCAGAATAAGAAAA+AGG + chr8.4:36280012-36280031 MS.gene038477:intron 30.0%
CAATAAGAAGAGAGAAAAAG+GGG + chr8.4:36279425-36279444 MS.gene038477:intron 30.0%
CAATCTGATATGTATGACAA+TGG + chr8.4:36278363-36278382 MS.gene038477:CDS 30.0%
CCAATAAGAAGAGAGAAAAA+GGG + chr8.4:36279424-36279443 MS.gene038477:intron 30.0%
CTAATCAGAAAGTGATTCTA+AGG - chr8.4:36280289-36280308 None:intergenic 30.0%
CTTAGAATCACTTTCTGATT+AGG + chr8.4:36280287-36280306 MS.gene038477:CDS 30.0%
GAGAAATTCAAAATGAGACT+TGG + chr8.4:36277230-36277249 MS.gene038477:intron 30.0%
GAGAATTAAAGATTCCACTT+GGG + chr8.4:36279664-36279683 MS.gene038477:intron 30.0%
GGATATGTTTCAAATTCCAA+TGG + chr8.4:36277008-36277027 MS.gene038477:intron 30.0%
TAAGGGTAGCTATTATTACA+TGG + chr8.4:36279029-36279048 MS.gene038477:intron 30.0%
TATACTCTTTACTAGCTAGT+GGG + chr8.4:36278905-36278924 MS.gene038477:intron 30.0%
TATATCATTGTTCCCATTGT+TGG + chr8.4:36278632-36278651 MS.gene038477:intron 30.0%
TATGGTTTCTATGATAACCT+TGG + chr8.4:36278565-36278584 MS.gene038477:intron 30.0%
TCAATTTGGTTATGACTCAT+GGG - chr8.4:36278001-36278020 None:intergenic 30.0%
TCACAACAGTTGTCAAAAAT+TGG - chr8.4:36279334-36279353 None:intergenic 30.0%
TCCAATAAGAAGAGAGAAAA+AGG + chr8.4:36279423-36279442 MS.gene038477:intron 30.0%
TGAGAAAATAATGCAATAGC+AGG - chr8.4:36276288-36276307 None:intergenic 30.0%
TTAAATGTGTGTCAAGTGTT+TGG - chr8.4:36277747-36277766 None:intergenic 30.0%
TTGAAAAATGTGACTAACCA+TGG - chr8.4:36277414-36277433 None:intergenic 30.0%
TTGACATAAACTCTTCAACA+AGG + chr8.4:36278418-36278437 MS.gene038477:CDS 30.0%
TTGCTAAGGAAATTAACCAT+TGG - chr8.4:36277027-36277046 None:intergenic 30.0%
TTTAAATTAGATGTACCGGA+CGG + chr8.4:36278205-36278224 MS.gene038477:intron 30.0%
TTTGTGGGGCTAATTTATAA+GGG + chr8.4:36279012-36279031 MS.gene038477:intron 30.0%
! ACACATTTAATCAGAAGTGT+CGG + chr8.4:36277757-36277776 MS.gene038477:intron 30.0%
! AGTCTCATTTTGAATTTCTC+AGG - chr8.4:36277230-36277249 None:intergenic 30.0%
! ATTCTCATTTTACCCACTTT+AGG + chr8.4:36277962-36277981 MS.gene038477:intron 30.0%
! CTGATTTGCAATGATAAATC+TGG - chr8.4:36275937-36275956 None:intergenic 30.0%
! TCTTGTGTTTAAAATGGAGT+AGG + chr8.4:36278339-36278358 MS.gene038477:intron 30.0%
! TTTGAAATTGAGGTTGAAGA+TGG + chr8.4:36276883-36276902 MS.gene038477:intron 30.0%
! TTTTGTGGGGCTAATTTATA+AGG + chr8.4:36279011-36279030 MS.gene038477:intron 30.0%
!! AGTTGGATGATTTAGGATTT+TGG + chr8.4:36276013-36276032 MS.gene038477:CDS 30.0%
!! ATTAGCTCAAGAACTGATTT+TGG - chr8.4:36276712-36276731 None:intergenic 30.0%
!! CAGTATGCTTTTTGTATACA+TGG + chr8.4:36280074-36280093 MS.gene038477:intron 30.0%
!! TAAAAAATCGACTTGTAAGG+TGG - chr8.4:36279272-36279291 None:intergenic 30.0%
!!! AAGCTTTGGTTTTGATGAAA+TGG - chr8.4:36276201-36276220 None:intergenic 30.0%
!!! ACCTTACAAGTCGATTTTTT+AGG + chr8.4:36279271-36279290 MS.gene038477:intron 30.0%
!!! CCTTACAAGTCGATTTTTTA+GGG + chr8.4:36279272-36279291 MS.gene038477:intron 30.0%
!!! CTCTTTCTTTAGGATTTTGT+GGG + chr8.4:36278997-36279016 MS.gene038477:intron 30.0%
!!! TAATTTTTTGGTAGACCCTT+AGG + chr8.4:36279084-36279103 MS.gene038477:intron 30.0%
!!! TCTCTTTCTTTAGGATTTTG+TGG + chr8.4:36278996-36279015 MS.gene038477:intron 30.0%
!!! TCTTTCTTTAGGATTTTGTG+GGG + chr8.4:36278998-36279017 MS.gene038477:intron 30.0%
!!! TTAGTGTTTTGAAAAGGGTT+AGG - chr8.4:36276153-36276172 None:intergenic 30.0%
AAAGCTTAAGTGAAGAGCTA+GGG + chr8.4:36276214-36276233 MS.gene038477:CDS 35.0%
AACAAAGCGATTATGAAGAG+TGG - chr8.4:36276445-36276464 None:intergenic 35.0%
AACTTAACTGGCAGATCATT+AGG - chr8.4:36278444-36278463 None:intergenic 35.0%
AAGATGTGATATGGATCACA+TGG + chr8.4:36279968-36279987 MS.gene038477:intron 35.0%
AATGATAAATCTGGTTGTGC+TGG - chr8.4:36275928-36275947 None:intergenic 35.0%
AATTTGGTTATGACTCATGG+GGG - chr8.4:36277999-36278018 None:intergenic 35.0%
ACAGCAAACAAACATCAAGT+TGG + chr8.4:36275965-36275984 MS.gene038477:CDS 35.0%
AGAATGAACCACCCTAATTA+AGG + chr8.4:36277114-36277133 MS.gene038477:intron 35.0%
AGAGAGGTAAAGATGTGATA+TGG + chr8.4:36279959-36279978 MS.gene038477:intron 35.0%
AGATGTGATATGGATCACAT+GGG + chr8.4:36279969-36279988 MS.gene038477:intron 35.0%
ATGATAAATCTGGTTGTGCT+GGG - chr8.4:36275927-36275946 None:intergenic 35.0%
ATGCAGAAAACAAATGGTTC+TGG - chr8.4:36277459-36277478 None:intergenic 35.0%
ATGTATGACAATGGTTCATC+TGG + chr8.4:36278372-36278391 MS.gene038477:CDS 35.0%
ATTGATACAGGGCTGTATAA+AGG - chr8.4:36277491-36277510 None:intergenic 35.0%
ATTTCTGCATCCAACTTAAC+TGG - chr8.4:36278456-36278475 None:intergenic 35.0%
CAAGAAGAGTTGGATGATTT+AGG + chr8.4:36276006-36276025 MS.gene038477:CDS 35.0%
CAATTTGGTTATGACTCATG+GGG - chr8.4:36278000-36278019 None:intergenic 35.0%
CACACAAGTTGTACAACAAT+TGG + chr8.4:36279452-36279471 MS.gene038477:intron 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr8.4:36276108-36276127 None:intergenic 35.0%
GAATGAACCACCCTAATTAA+GGG + chr8.4:36277115-36277134 MS.gene038477:intron 35.0%
GACAAAGTAACTAAACTCGA+AGG - chr8.4:36279692-36279711 None:intergenic 35.0%
GAGAGAATATTTCCCATTAG+TGG - chr8.4:36280103-36280122 None:intergenic 35.0%
GGAGAAAAGCAAGTAAAAAC+AGG + chr8.4:36278926-36278945 MS.gene038477:intron 35.0%
GTTGCCCCTATAAGATAAAA+TGG - chr8.4:36276688-36276707 None:intergenic 35.0%
TAATGATCTGCCAGTTAAGT+TGG + chr8.4:36278443-36278462 MS.gene038477:CDS 35.0%
TACACTGGAATTCCTCTAAT+AGG - chr8.4:36276249-36276268 None:intergenic 35.0%
TACAGATGATCAAGAAGAGT+TGG + chr8.4:36275996-36276015 MS.gene038477:CDS 35.0%
TAGCTGATGCAGAAAACAAA+TGG - chr8.4:36277465-36277484 None:intergenic 35.0%
TAGGCACGAAAATTCACAAA+AGG + chr8.4:36278799-36278818 MS.gene038477:intron 35.0%
TATACATGGCTTCCACTAAT+GGG + chr8.4:36280088-36280107 MS.gene038477:intron 35.0%
TGGTTGAAAAGAGTTGTTGT+TGG - chr8.4:36276181-36276200 None:intergenic 35.0%
TTGAGATGAGATACCCTAAT+TGG + chr8.4:36279178-36279197 MS.gene038477:intron 35.0%
TTGTAATGTAGTACAAGGAG+TGG + chr8.4:36276976-36276995 MS.gene038477:intron 35.0%
! AAATTTAGCTATGGTTCTGC+AGG + chr8.4:36277058-36277077 MS.gene038477:intron 35.0%
! AGACTAAGTAGCTTTTTGCT+TGG + chr8.4:36277090-36277109 MS.gene038477:intron 35.0%
! ATTTTCTCCCTTAATTAGGG+TGG - chr8.4:36277125-36277144 None:intergenic 35.0%
! CCCTTTTTCTCTCTTCTTAT+TGG - chr8.4:36279427-36279446 None:intergenic 35.0%
! TATCGTATCAGCTTTAACCA+TGG + chr8.4:36277394-36277413 MS.gene038477:intron 35.0%
! TATCTGTAATTTTCACCGTC+CGG - chr8.4:36278223-36278242 None:intergenic 35.0%
! TCATTTTACCCACTTTAGGT+GGG + chr8.4:36277966-36277985 MS.gene038477:intron 35.0%
! TCTTGAGCTAATGGATGTAA+AGG + chr8.4:36276720-36276739 MS.gene038477:CDS 35.0%
!! AGGATTTTGGAAAAGAGCTT+TGG + chr8.4:36276026-36276045 MS.gene038477:CDS 35.0%
!! CCCTAAAAAATCGACTTGTA+AGG - chr8.4:36279275-36279294 None:intergenic 35.0%
!! CTTGATGTTTGTTTGCTGTT+TGG - chr8.4:36275964-36275983 None:intergenic 35.0%
!! GTTCTGATTGCGTGTTTTAA+TGG + chr8.4:36276910-36276929 MS.gene038477:intron 35.0%
!! TCTGTAGTCCTTTGAAATTG+AGG + chr8.4:36276873-36276892 MS.gene038477:intron 35.0%
!! TTAGGGTTTTGATGATACAC+TGG - chr8.4:36276264-36276283 None:intergenic 35.0%
!!! AACAAATGGTTCTGGTTTTC+TGG - chr8.4:36277451-36277470 None:intergenic 35.0%
!!! TTCTGGTTTTCTGGTAAATG+TGG - chr8.4:36277442-36277461 None:intergenic 35.0%
AAGACACATTTCCAACAGGA+TGG - chr8.4:36280176-36280195 None:intergenic 40.0%
AATGTAGTACAAGGAGTGGT+TGG + chr8.4:36276980-36276999 MS.gene038477:intron 40.0%
ACATGTGAGTATGAGAGAGA+GGG - chr8.4:36279360-36279379 None:intergenic 40.0%
ACCACCAAAGACACGAATAT+CGG + chr8.4:36277636-36277655 MS.gene038477:intron 40.0%
ACCCCATCATCATGGAATTT+GGG - chr8.4:36278878-36278897 None:intergenic 40.0%
AGACCCTTAGGTAGAAATGT+TGG + chr8.4:36279096-36279115 MS.gene038477:intron 40.0%
AGAGAAGACACATTTCCAAC+AGG - chr8.4:36280180-36280199 None:intergenic 40.0%
AGAGAGAGAATGAAGAAGAG+AGG - chr8.4:36279393-36279412 None:intergenic 40.0%
AGCCACATAGTTGGAAAACT+TGG + chr8.4:36279052-36279071 MS.gene038477:intron 40.0%
AGGTAGAAATGTTGGTGCAA+AGG + chr8.4:36279104-36279123 MS.gene038477:intron 40.0%
ATTACATGGAGCCACATAGT+TGG + chr8.4:36279043-36279062 MS.gene038477:intron 40.0%
ATTGGAAAGGGAAGGGTTAA+AGG - chr8.4:36276076-36276095 None:intergenic 40.0%
CAAAGCTTAAGTGAAGAGCT+AGG + chr8.4:36276213-36276232 MS.gene038477:CDS 40.0%
CACCCAAATTCCATGATGAT+GGG + chr8.4:36278873-36278892 MS.gene038477:intron 40.0%
GAGAGAGAATGAAGAAGAGA+GGG - chr8.4:36279392-36279411 None:intergenic 40.0%
GATGTGATATGGATCACATG+GGG + chr8.4:36279970-36279989 MS.gene038477:intron 40.0%
GCACCAACATTTCTACCTAA+GGG - chr8.4:36279102-36279121 None:intergenic 40.0%
GGGTTTCTCAAACCTATTAG+AGG + chr8.4:36276234-36276253 MS.gene038477:CDS 40.0%
GGTAGAAATGTTGGTGCAAA+GGG + chr8.4:36279105-36279124 MS.gene038477:intron 40.0%
GGTTAGGTATGAGATTGTAG+AGG - chr8.4:36276137-36276156 None:intergenic 40.0%
GTATACATGGCTTCCACTAA+TGG + chr8.4:36280087-36280106 MS.gene038477:intron 40.0%
TACCCCATCATCATGGAATT+TGG - chr8.4:36278879-36278898 None:intergenic 40.0%
TGCACCAACATTTCTACCTA+AGG - chr8.4:36279103-36279122 None:intergenic 40.0%
TGGAAATGTGTCTTCTCTTG+AGG + chr8.4:36280182-36280201 MS.gene038477:CDS 40.0%
TGGTGATAAAGAAATCCCCA+CGG - chr8.4:36278592-36278611 None:intergenic 40.0%
! AATCACTAACCTGATGATGC+TGG - chr8.4:36278251-36278270 None:intergenic 40.0%
! ACCCAAATTCCATGATGATG+GGG + chr8.4:36278874-36278893 MS.gene038477:intron 40.0%
! CCATGTGTTTGGTAGTAACA+GGG + chr8.4:36280122-36280141 MS.gene038477:intron 40.0%
! CTAGCTCTTCACTTAAGCTT+TGG - chr8.4:36276215-36276234 None:intergenic 40.0%
! CTCATTTTACCCACTTTAGG+TGG + chr8.4:36277965-36277984 MS.gene038477:intron 40.0%
! GAAGTATTTGGCTCCATGTT+TGG + chr8.4:36280260-36280279 MS.gene038477:intron 40.0%
! GACCAAGTTTTCCAACTATG+TGG - chr8.4:36279057-36279076 None:intergenic 40.0%
! GATTCTAAGGAGTCCAAACA+TGG - chr8.4:36280276-36280295 None:intergenic 40.0%
! GTTCATGCTGTTGAGCTTTT+AGG + chr8.4:36276462-36276481 MS.gene038477:CDS 40.0%
! TCATTTGGAGCAAATCTTCC+AGG + chr8.4:36278502-36278521 MS.gene038477:CDS 40.0%
! TCCATGTGTTTGGTAGTAAC+AGG + chr8.4:36280121-36280140 MS.gene038477:intron 40.0%
!! GCAAACAAACATCAAGTTGG+AGG + chr8.4:36275968-36275987 MS.gene038477:CDS 40.0%
!! TACAAGGAGTGGTTGGTTTA+TGG + chr8.4:36276987-36277006 MS.gene038477:intron 40.0%
!!! ATTTGGGTGCTCTTGTTTTG+AGG - chr8.4:36278862-36278881 None:intergenic 40.0%
AAACTCCTCAGTCATGACAG+AGG - chr8.4:36277371-36277390 None:intergenic 45.0%
AAGGAGCCCTTAGATTGGAA+AGG - chr8.4:36276089-36276108 None:intergenic 45.0%
ACCCTTCCCTTTCCAATCTA+AGG + chr8.4:36276079-36276098 MS.gene038477:CDS 45.0%
AGAAGAAGGAGCCCTTAGAT+TGG - chr8.4:36276094-36276113 None:intergenic 45.0%
AGGAGCCCTTAGATTGGAAA+GGG - chr8.4:36276088-36276107 None:intergenic 45.0%
CAAATTCCACTGTTGATGCG+TGG + chr8.4:36277813-36277832 MS.gene038477:intron 45.0%
CACATGTGAGTATGAGAGAG+AGG - chr8.4:36279361-36279380 None:intergenic 45.0%
CCCTGTTACTACCAAACACA+TGG - chr8.4:36280125-36280144 None:intergenic 45.0%
CCCTTAGATTGGAAAGGGAA+GGG - chr8.4:36276083-36276102 None:intergenic 45.0%
CCCTTCCCTTTCCAATCTAA+GGG + chr8.4:36276080-36276099 MS.gene038477:CDS 45.0%
CTATGATAACCTTGGTCCGT+GGG + chr8.4:36278573-36278592 MS.gene038477:intron 45.0%
GCACCCAAATTCCATGATGA+TGG + chr8.4:36278872-36278891 MS.gene038477:intron 45.0%
GTGTCCGATATTCGTGTCTT+TGG - chr8.4:36277643-36277662 None:intergenic 45.0%
TATGATAACCTTGGTCCGTG+GGG + chr8.4:36278574-36278593 MS.gene038477:intron 45.0%
TCCGATATTCGTGTCTTTGG+TGG - chr8.4:36277640-36277659 None:intergenic 45.0%
TCTATGATAACCTTGGTCCG+TGG + chr8.4:36278572-36278591 MS.gene038477:intron 45.0%
TGAGATCAAAGTTGTTGCCG+CGG + chr8.4:36276373-36276392 MS.gene038477:CDS 45.0%
TTGGTTGCATGGTAAGCCAA+AGG + chr8.4:36280149-36280168 MS.gene038477:CDS 45.0%
TTTCCAACAGGATGGACCTT+TGG - chr8.4:36280168-36280187 None:intergenic 45.0%
! CATGCTGTTGAGCTTTTAGG+TGG + chr8.4:36276465-36276484 MS.gene038477:CDS 45.0%
! GAAGCATCAAAGAGTGGTTG+TGG - chr8.4:36276312-36276331 None:intergenic 45.0%
! TTGGTAGTAACAGGGAAGCT+TGG + chr8.4:36280130-36280149 MS.gene038477:intron 45.0%
!! GAAGCAGAAGCATCAAAGAG+TGG - chr8.4:36276318-36276337 None:intergenic 45.0%
!! ATAAATATATTTAAATATAG+AGG - chr8.4:36279494-36279513 None:intergenic 5.0%
!!! CTTTATATATATTTTTTTTT+TGG - chr8.4:36279941-36279960 None:intergenic 5.0%
AAAGAAATCCCCACGGACCA+AGG - chr8.4:36278585-36278604 None:intergenic 50.0%
AACAGGGAAGCTTGGTTGCA+TGG + chr8.4:36280138-36280157 MS.gene038477:intron 50.0%
AAGCCAAAGGTCCATCCTGT+TGG + chr8.4:36280162-36280181 MS.gene038477:CDS 50.0%
CAAGATCCACGCATCAACAG+TGG - chr8.4:36277822-36277841 None:intergenic 50.0%
CACTGTTGATGCGTGGATCT+TGG + chr8.4:36277820-36277839 MS.gene038477:intron 50.0%
GATAGACCACCAGCATCATC+AGG + chr8.4:36278239-36278258 MS.gene038477:CDS 50.0%
GCCCTTAGATTGGAAAGGGA+AGG - chr8.4:36276084-36276103 None:intergenic 50.0%
GGAGGCTCTGCTTCCAATTA+GGG - chr8.4:36279194-36279213 None:intergenic 50.0%
GTGATATGGATCACATGGGG+TGG + chr8.4:36279973-36279992 MS.gene038477:intron 50.0%
GTTCGCTTCCCACCTAAAGT+GGG - chr8.4:36277977-36277996 None:intergenic 50.0%
TGATGCGTGGATCTTGGTAG+CGG + chr8.4:36277826-36277845 MS.gene038477:intron 50.0%
TGGAGGCTCTGCTTCCAATT+AGG - chr8.4:36279195-36279214 None:intergenic 50.0%
! CACTAACCTGATGATGCTGG+TGG - chr8.4:36278248-36278267 None:intergenic 50.0%
!! TAAACTCGAAGGCACCCAAG+TGG - chr8.4:36279681-36279700 None:intergenic 50.0%
CCTCAGTCATGACAGAGGAG+AGG - chr8.4:36277366-36277385 None:intergenic 55.0%
CCTCTCCTCTGTCATGACTG+AGG + chr8.4:36277363-36277382 MS.gene038477:intron 55.0%
GGTTCGCTTCCCACCTAAAG+TGG - chr8.4:36277978-36277997 None:intergenic 55.0%
GTGGTAGTCCAACGCATCCT+CGG - chr8.4:36276426-36276445 None:intergenic 55.0%
!! CTGCGCTTTGAAGGAAACCG+CGG - chr8.4:36276393-36276412 None:intergenic 55.0%
GCTCTCACGCTGCGCTTTGA+AGG - chr8.4:36276402-36276421 None:intergenic 60.0%
TGAGAGCTCCGAGGATGCGT+TGG + chr8.4:36276415-36276434 MS.gene038477:CDS 60.0%
AGCGCAGCGTGAGAGCTCCG+AGG + chr8.4:36276406-36276425 MS.gene038477:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 36275913 36280308 36275913 ID=MS.gene038477
chr8.4 mRNA 36275913 36280308 36275913 ID=MS.gene038477.t1;Parent=MS.gene038477
chr8.4 exon 36275913 36276495 36275913 ID=MS.gene038477.t1.exon1;Parent=MS.gene038477.t1
chr8.4 CDS 36275913 36276495 36275913 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
chr8.4 exon 36276701 36276777 36276701 ID=MS.gene038477.t1.exon2;Parent=MS.gene038477.t1
chr8.4 CDS 36276701 36276777 36276701 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
chr8.4 exon 36278215 36278260 36278215 ID=MS.gene038477.t1.exon3;Parent=MS.gene038477.t1
chr8.4 CDS 36278215 36278260 36278215 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
chr8.4 exon 36278361 36278523 36278361 ID=MS.gene038477.t1.exon4;Parent=MS.gene038477.t1
chr8.4 CDS 36278361 36278523 36278361 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
chr8.4 exon 36280143 36280203 36280143 ID=MS.gene038477.t1.exon5;Parent=MS.gene038477.t1
chr8.4 CDS 36280143 36280203 36280143 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
chr8.4 exon 36280264 36280308 36280264 ID=MS.gene038477.t1.exon6;Parent=MS.gene038477.t1
chr8.4 CDS 36280264 36280308 36280264 ID=cds.MS.gene038477.t1;Parent=MS.gene038477.t1
Gene Sequence

>MS.gene038477

ATGGAGCTATTCCCAGCACAACCAGATTTATCATTGCAAATCAGTCTTCCAAACAGCAAACAAACATCAAGTTGGAGGAGAAATACAGATGATCAAGAAGAGTTGGATGATTTAGGATTTTGGAAAAGAGCTTTGGAGTCAAGAACAGAAGCAAATCACACCTTTAACCCTTCCCTTTCCAATCTAAGGGCTCCTTCTTCTTCTTCTTCTTCTTCTTCAAACCTCTACAATCTCATACCTAACCCTTTTCAAAACACTAATAATTCCAACAACAACTCTTTTCAACCATTTCATCAAAACCAAAGCTTAAGTGAAGAGCTAGGGTTTCTCAAACCTATTAGAGGAATTCCAGTGTATCATCAAAACCCTAATCCTGCTATTGCATTATTTTCTCAACCACAACCACTCTTTGATGCTTCTGCTTCAAGTTCATCAACAGCTTTTCATTCTCATACTTCGATGAGATCAAAGTTGTTGCCGCGGTTTCCTTCAAAGCGCAGCGTGAGAGCTCCGAGGATGCGTTGGACTACCACTCTTCATAATCGCTTTGTTCATGCTGTTGAGCTTTTAGGTGGCCATGAAAGTAATTTTTTATTACCCTTCTTTCTTTGTGTTAACAATGAGTTTATCGAAATCGCGACTTGCAACCTTAATTTTGACAAAAACTACGGTTTAAAACATTAACAAAATATCGATGTGATGTTACTGTGATTTTGTCAAACTTACTGTGCTTGTCATCATAATTTTGTTATATTAGTTATTGCACTAATTTCCATTTTATCTTATAGGGGCAACACCAAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTAACCCTATCACATGTTAAATCTCATTTACAGGTATAATCTTAAACTCTTTCACTGTACTAAACTAAATAGTTTATAGTTATAATAATCTGTTAATTATAAACTCCTTGAATGTTATTTTAAGTTCTTCTGTAGTCCTTTGAAATTGAGGTTGAAGATGGTACAGTTCTGATTGCGTGTTTTAATGGTTACTGTTACAGAATTATATATAATATAATAATACTGTATAGTTTGTAATGTAGTACAAGGAGTGGTTGGTTTATGGATATGTTTCAAATTCCAATGGTTAATTTCCTTAGCAAAAATTGTTTTTAAATTTAGCTATGGTTCTGCAGGCTAGTAATAAGACTAAGTAGCTTTTTGCTTGGAAGAATGAACCACCCTAATTAAGGGAGAAAATTGTAGTAGTAGTGTGACTTAGAAAGAGAGAGAGAGAGAGTTGTACAGTAGCTATCAAATTTCTAAAAACGAGTAGGACAAAGCCTGAGAAATTCAAAATGAGACTTGGTCACGCTATGTAGTCAAAATTATTATTTATTATTATTATTATTTTATTGCACAAGAAAATAGGAAAAATAACAAATGAGAAAGTACTAAACATCATCATTTCTCAATGATCCTCTCCTCTGTCATGACTGAGGAGTTTCTTTATCGTATCAGCTTTAACCATGGTTAGTCACATTTTTCAATGCTTCCACATTTACCAGAAAACCAGAACCATTTGTTTTCTGCATCAGCTAAAACCTTTATACAGCCCTGTATCAATTGAGTAAATTCATGAAAGTATTTTTTTGTTATTTTAATTTGATGTCCTATATATGCTTTAAGTAGTACAATATTATGCCAACTGATCCAATTGATATAGTTTGAGTTCATACTATACTATGAAGAACCACCAAAGACACGAATATCGGACACAATGCAAATACTAACACGTTGACACAGTAATAATTAGAAAAAAATGAATTCATTTAATAGAATCACATGTGTTGACACATTCCAAACACTTGACACACATTTAATCAGAAGTGTCGGTGTTACATAAATACTATATCAGGGATTTCAATTCAAATTCCACTGTTGATGCGTGGATCTTGGTAGCGGATACTCATCCGACCATCCTTTTTTTTAGTTGTTTTAAAATTAATTTATATATATGAAGAAAATTAATGAATTTTGTTATTTTTCATGAAATTATTTACTTTTTACTATACTACATTCTCATTTTACCCACTTTAGGTGGGAAGCGAACCCCCATGAGTCATAACCAAATTGATATGATTTGTTGTGTTTCATTTAGTTTAAATTGGATTCGTAAAATCCACTATCAAATTAAATGAAATACAAAAAGATTTATTGATCTAATGATGGAAAATAAACTTGCGTATGAGTCAAAAACAATATATTTATGCATGTGCATATGTTATAATTGCTTTTCCGTGTTAATGATACTCTACAAATTTAAATTAGATGTACCGGACGGTGAAAATTACAGATAGACCACCAGCATCATCAGGTTAGTGATTATACTCAATTTAATTAGTAAGAAGATTATATATTAGGCCATATATTTATCTACTATTTTCTTGATTTTTCTTGTGTTTAAAATGGAGTAGGTCAATCTGATATGTATGACAATGGTTCATCTGGAGATACTTCTGATAACTTCATGTTTGACATAAACTCTTCAACAAGGCCTAATGATCTGCCAGTTAAGTTGGATGCAGAAATCACTAATCAAGATAAAGAAAATAATATCATTTGGAGCAAATCTTCCAGGTAATATATAATATATATAATACATAATACTAGTATATATTTATGGTTTCTATGATAACCTTGGTCCGTGGGGATTTCTTTATCACCATGTTCAAAATCTGAGTAATATATATCATTGTTCCCATTGTTGGTTGATTATCATTTGATATAGATACTATTTCATTATTATGTTTCAATTATCATGTGATAAAGTAGCTTTATAAGCAGAGCAATTCATGCATGTCTTATTCAGTTTAGCAATATCTCTTTCTCAACTCTGCACATAAACAAATATATAGGCACGAAAATTCACAAAAGGAATAAATGATTCAAAGTTTGCTTTGTTTTGTCTGTGTCCTCAAAACAAGAGCACCCAAATTCCATGATGATGGGGTAATTATATATACTCTTTACTAGCTAGTGGGAGAAAAGCAAGTAAAAACAGGTTTTTGATATATGTATTTCTCTATTATCTATTTTAAAATTAGAGATATCTCTTTCTTTAGGATTTTGTGGGGCTAATTTATAAGGGTAGCTATTATTACATGGAGCCACATAGTTGGAAAACTTGGTCTTAAAGCTAATTTTTTGGTAGACCCTTAGGTAGAAATGTTGGTGCAAAGGGATTACGTGTCCTTTCAATTCTTCATATATGCACAGACACATTGTTATTAATTGAGATGAGATACCCTAATTGGAAGCAGAGCCTCCAGATGTTAAGATTTTCATATTGGGTGAGATAATTTAAAAATGTGTTTATAGGTTACCACCTTACAAGTCGATTTTTTAGGGTTGAAAATATATTTAAGAGAAATGATATTTGTACAACCAATTTTTGACAACTGTTGTGACAACCCTCTCTCTCATACTCACATGTGTTTTTATTCCCTCTCTTCTTCATTCTCTCTCTATTCTTTTTATCCAATAAGAAGAGAGAAAAAGGGGTTGTCACACAAGTTGTACAACAATTGGTTGTACAAATATCACTCCTCTATATTTAAATATATTTATGAAAATGAGTTATTTTTACGCTACTTTTTAAGTTTGATCGTGTTTAAGGACTCAATTACACAATACTAAAACTAAAAGAGGTTAAATTAGCAACAAAGATTTATAGAGGGAAACTGTATAGTCTTTTTTAAAATTTGTAGCTAATGACGAGAGAATTAAAGATTCCACTTGGGTGCCTTCGAGTTTAGTTACTTTGTCTCTATTTCTCTCAACCAATTATTCTATCTCATCAAAATAATTTATTTTAATCATTCATTGATCATTTAAATACACTAAAATCATCAAAGTCACAAAAATTCAAAATCACCAAAGTATTTTCAGAGAATTAGAGAGTATCATTTTTTTCATCACTAATTTTATTCTTTCTAACAATATTATTTGCCAAATTTGTTGCACCATGTTTATATATAAAGAGAGGTCACCACCAAAAAAAAAATATATATAAAGAGAGGTAAAGATGTGATATGGATCACATGGGGTGGCATAAACTTTATTTTTCAACTAGCAGAATAAGAAAAAGGGGCTATAAATAAGACAGTAAAAAGATTGCTTTCTTTTGTCAGTATGCTTTTTGTATACATGGCTTCCACTAATGGGAAATATTCTCTCCATGTGTTTGGTAGTAACAGGGAAGCTTGGTTGCATGGTAAGCCAAAGGTCCATCCTGTTGGAAATGTGTCTTCTCTTGAGGTTTGTAAATATTATTACTCATTGCCCTCTTTATTTTTGAACTGTTATTTTTCATTGAAGTATTTGGCTCCATGTTTGGACTCCTTAGAATCACTTTCTGATTAG
Protein sequence

>MS.gene038477.t1

MELFPAQPDLSLQISLPNSKQTSSWRRNTDDQEELDDLGFWKRALESRTEANHTFNPSLSNLRAPSSSSSSSSNLYNLIPNPFQNTNNSNNNSFQPFHQNQSLSEELGFLKPIRGIPVYHQNPNPAIALFSQPQPLFDASASSSSTAFHSHTSMRSKLLPRFPSKRSVRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRPPASSGQSDMYDNGSSGDTSDNFMFDINSSTRPNDLPVKLDAEITNQDKENNIIWSKSSREAWLHGKPKVHPVGNVSSLEYLAPCLDSLESLSD