AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038613

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038613.t1 MTR_8g063550 84.954 432 46 4 1 429 29 444 0.0 729
MS.gene038613.t1 MTR_8g093580 70.870 460 92 12 1 423 29 483 0.0 609
MS.gene038613.t1 MTR_8g063550 82.645 363 44 4 1 360 29 375 0.0 595
MS.gene038613.t1 MTR_8g063550 87.829 304 33 1 1 304 29 328 0.0 550
MS.gene038613.t1 MTR_8g063550 47.500 80 28 2 254 332 222 288 2.22e-11 65.1
MS.gene038613.t1 MTR_3g096140 63.107 206 71 2 1 201 30 235 1.70e-91 278
MS.gene038613.t1 MTR_3g096140 63.107 206 71 2 1 201 9 214 2.28e-90 277
MS.gene038613.t1 MTR_3g096140 63.107 206 71 2 1 201 30 235 4.03e-90 277
MS.gene038613.t1 MTR_1g090723 56.028 141 62 0 8 148 39 179 1.22e-56 197
MS.gene038613.t1 MTR_1g090723 57.447 141 59 1 8 148 39 178 2.67e-56 196
MS.gene038613.t1 MTR_1g090723 57.447 141 59 1 8 148 39 178 5.49e-56 195
MS.gene038613.t1 MTR_0036s0150 53.846 143 65 1 8 150 36 177 3.17e-54 189
MS.gene038613.t1 MTR_1g097300 53.947 152 70 0 2 153 43 194 3.63e-53 187
MS.gene038613.t1 MTR_1g090720 47.525 202 90 6 2 197 66 257 2.63e-48 172
MS.gene038613.t1 MTR_6g477900 51.938 129 62 0 2 130 30 158 1.44e-43 152
MS.gene038613.t1 MTR_5g069030 52.893 121 57 0 9 129 56 176 3.94e-42 157
MS.gene038613.t1 MTR_2g064090 52.344 128 60 1 2 128 30 157 4.92e-42 152
MS.gene038613.t1 MTR_5g076850 50.000 140 69 1 2 140 30 169 5.31e-42 157
MS.gene038613.t1 MTR_3g064580 49.286 140 69 2 2 139 30 169 9.52e-41 154
MS.gene038613.t1 MTR_3g093050 52.500 120 57 0 9 128 53 172 2.47e-40 152
MS.gene038613.t1 MTR_3g093050 52.500 120 57 0 9 128 53 172 4.19e-40 151
MS.gene038613.t1 MTR_3g093040 50.820 122 56 2 9 128 139 258 1.46e-39 144
MS.gene038613.t1 MTR_7g011130 42.953 149 67 3 9 141 50 196 1.38e-38 142
MS.gene038613.t1 MTR_7g011120 43.357 143 69 3 9 141 39 179 1.22e-37 139
MS.gene038613.t1 MTR_2g062730 46.479 142 68 4 8 147 40 175 4.03e-37 139
MS.gene038613.t1 MTR_4g101680 40.526 190 103 6 2 187 31 214 9.71e-37 138
MS.gene038613.t1 MTR_1g096430 48.889 135 60 4 8 138 37 166 2.54e-36 136
MS.gene038613.t1 MTR_4g108760 46.212 132 67 2 5 134 44 173 2.81e-36 137
MS.gene038613.t1 MTR_3g435150 46.970 132 66 2 5 134 43 172 3.57e-36 135
MS.gene038613.t1 MTR_4g098630 44.853 136 72 1 2 134 30 165 8.52e-36 134
MS.gene038613.t1 MTR_5g014300 42.308 156 80 2 2 150 30 182 1.07e-35 134
MS.gene038613.t1 MTR_6g084430 47.581 124 61 2 5 128 32 151 1.18e-35 134
MS.gene038613.t1 MTR_3g109340 46.212 132 66 3 5 134 49 177 3.94e-35 133
MS.gene038613.t1 MTR_3g070030 41.844 141 73 3 9 144 50 186 5.06e-35 133
MS.gene038613.t1 MTR_8g076110 47.154 123 62 2 8 129 36 156 5.74e-35 132
MS.gene038613.t1 MTR_3g088110 48.000 125 59 3 9 130 38 159 1.02e-34 130
MS.gene038613.t1 MTR_6g012670 43.571 140 71 3 9 144 51 186 1.25e-34 131
MS.gene038613.t1 MTR_4g035590 48.485 132 56 4 3 129 33 157 1.68e-34 132
MS.gene038613.t1 MTR_4g075980 51.145 131 54 3 1 128 38 161 1.74e-34 130
MS.gene038613.t1 MTR_2g079990 44.094 127 69 1 2 128 40 164 1.91e-34 131
MS.gene038613.t1 MTR_5g012080 41.358 162 83 5 2 159 31 184 2.89e-34 131
MS.gene038613.t1 MTR_4g036030 41.060 151 79 5 8 155 37 180 3.01e-34 130
MS.gene038613.t1 MTR_7g085260 46.565 131 62 3 4 128 43 171 1.29e-33 130
MS.gene038613.t1 MTR_2g078700 47.368 133 62 4 5 132 50 179 1.56e-33 129
MS.gene038613.t1 MTR_3g109340 43.939 132 68 3 5 134 49 176 1.64e-33 129
MS.gene038613.t1 MTR_6g032770 45.113 133 65 4 1 128 41 170 3.20e-33 129
MS.gene038613.t1 MTR_2g086880 46.610 118 55 2 8 125 48 157 3.72e-33 131
MS.gene038613.t1 MTR_2g086880 47.009 117 54 2 9 125 49 157 3.82e-33 130
MS.gene038613.t1 MTR_4g134460 44.615 130 67 4 2 130 78 203 9.32e-33 128
MS.gene038613.t1 MTR_5g021710 44.697 132 64 3 2 129 32 158 1.59e-32 126
MS.gene038613.t1 MTR_4g081870 43.750 128 66 3 9 132 40 165 2.02e-32 124
MS.gene038613.t1 MTR_8g467490 43.182 132 62 4 8 128 44 173 2.09e-32 127
MS.gene038613.t1 MTR_7g085220 36.667 180 87 6 9 173 39 206 6.06e-32 124
MS.gene038613.t1 MTR_8g094580 42.857 126 65 3 9 130 38 160 7.31e-32 123
MS.gene038613.t1 MTR_8g024480 40.714 140 67 3 3 129 40 176 8.70e-32 125
MS.gene038613.t1 MTR_2157s0010 41.606 137 66 3 9 133 39 173 1.07e-31 122
MS.gene038613.t1 MTR_6g011860 44.275 131 61 5 8 128 45 173 1.82e-31 124
MS.gene038613.t1 MTR_2g064470 42.748 131 70 3 1 128 30 158 2.13e-31 122
MS.gene038613.t1 MTR_1g008740 45.238 126 64 3 5 128 41 163 2.53e-31 123
MS.gene038613.t1 MTR_1g008740 45.238 126 64 3 5 128 55 177 3.42e-31 123
MS.gene038613.t1 MTR_8g059170 43.411 129 69 2 2 128 38 164 3.93e-31 122
MS.gene038613.t1 MTR_5g041940 44.000 125 64 3 9 129 34 156 4.23e-31 120
MS.gene038613.t1 MTR_2g080010 38.994 159 77 4 9 154 46 197 6.97e-31 122
MS.gene038613.t1 MTR_3g070040 39.855 138 71 4 10 141 40 171 1.39e-30 120
MS.gene038613.t1 MTR_3g096920 42.400 125 66 3 9 130 38 159 1.88e-30 119
MS.gene038613.t1 MTR_5g040420 41.985 131 64 4 8 128 44 172 1.95e-30 121
MS.gene038613.t1 MTR_8g023860 45.455 121 58 4 7 125 42 156 1.30e-29 119
MS.gene038613.t1 MTR_2g079990 46.018 113 59 1 2 114 40 150 1.69e-29 118
MS.gene038613.t1 MTR_7g100990 41.353 133 69 4 10 136 43 172 3.45e-29 116
MS.gene038613.t1 MTR_8g023900 43.548 124 62 4 7 128 223 340 3.62e-29 119
MS.gene038613.t1 MTR_8g023900 39.844 128 71 3 3 128 38 161 3.27e-25 107
MS.gene038613.t1 MTR_2g093810 43.651 126 63 4 9 128 45 168 4.60e-29 116
MS.gene038613.t1 MTR_1g069805 33.014 209 118 6 9 213 41 231 6.57e-29 114
MS.gene038613.t1 MTR_3g116070 40.625 128 72 2 5 130 51 176 1.45e-28 115
MS.gene038613.t1 MTR_7g005280 41.791 134 65 4 9 138 46 170 1.82e-28 113
MS.gene038613.t1 MTR_2g068880 40.441 136 65 3 8 128 52 186 1.23e-27 112
MS.gene038613.t1 MTR_4g089135 49.495 99 46 2 9 105 46 142 1.41e-27 112
MS.gene038613.t1 MTR_8g023930 41.935 124 64 4 7 128 54 171 1.55e-27 114
MS.gene038613.t1 MTR_5g090970 40.602 133 65 4 8 128 48 178 2.48e-27 111
MS.gene038613.t1 MTR_8g023840 42.975 121 61 4 7 125 41 155 2.48e-27 112
MS.gene038613.t1 MTR_7g097090 42.149 121 62 3 9 127 41 155 3.80e-27 110
MS.gene038613.t1 MTR_2g068920 50.000 102 46 2 8 105 51 151 6.20e-27 109
MS.gene038613.t1 MTR_5g090970 39.850 133 65 4 8 128 48 177 1.74e-26 108
MS.gene038613.t1 MTR_3g096920 47.525 101 50 2 9 109 38 135 2.09e-26 108
MS.gene038613.t1 MTR_8g094580 43.689 103 53 2 32 130 5 106 3.75e-25 103
MS.gene038613.t1 MTR_8g099750 38.849 139 70 4 9 140 45 175 8.87e-25 102
MS.gene038613.t1 MTR_3g098810 39.130 138 70 3 9 136 45 178 9.99e-24 99.8
MS.gene038613.t1 MTR_3g098810 45.098 102 48 2 8 105 44 141 4.29e-21 90.5
MS.gene038613.t1 MTR_2g086690 37.692 130 75 4 7 130 35 164 7.08e-21 91.7
MS.gene038613.t1 MTR_8g023880 35.507 138 63 6 7 128 37 164 5.17e-19 87.0
MS.gene038613.t1 MTR_4g052620 34.375 128 78 3 9 130 37 164 7.54e-19 86.3
MS.gene038613.t1 MTR_7g105170 32.558 129 77 5 9 128 37 164 1.59e-18 85.1
MS.gene038613.t1 MTR_7g070140 48.718 78 36 2 32 105 14 91 4.08e-18 80.9
MS.gene038613.t1 MTR_4g094302 34.848 132 68 5 6 129 39 160 1.16e-16 78.2
MS.gene038613.t1 MTR_4g094302 39.216 102 50 4 6 105 39 130 1.81e-15 73.9
MS.gene038613.t1 MTR_1g097300 53.704 54 25 0 100 153 1 54 1.32e-12 69.7
MS.gene038613.t1 MTR_7g070150 43.860 57 29 1 72 128 4 57 6.18e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038613.t1 AT5G09330 50.661 227 98 3 1 215 29 253 4.50e-72 235
MS.gene038613.t1 AT5G09330 50.661 227 98 3 1 215 29 253 4.50e-72 235
MS.gene038613.t1 AT5G09330 50.661 227 98 3 1 215 29 253 4.50e-72 235
MS.gene038613.t1 AT5G09330 50.661 227 98 3 1 215 29 253 4.50e-72 235
MS.gene038613.t1 AT5G09330 50.661 227 98 3 1 215 29 253 4.50e-72 235
MS.gene038613.t1 AT5G64060 53.431 204 85 2 1 200 29 226 1.88e-67 219
MS.gene038613.t1 AT5G04410 57.718 149 63 0 3 151 34 182 2.72e-60 206
MS.gene038613.t1 AT3G10500 58.156 141 59 0 3 143 34 174 3.27e-56 194
MS.gene038613.t1 AT3G10490 52.941 153 70 2 1 152 50 201 3.38e-54 181
MS.gene038613.t1 AT3G10480 54.305 151 67 2 1 150 50 199 2.83e-53 184
MS.gene038613.t1 AT3G10480 53.333 150 69 1 1 150 50 198 3.67e-53 184
MS.gene038613.t1 AT3G10490 52.941 153 70 2 1 152 50 201 4.05e-53 184
MS.gene038613.t1 AT1G34180 46.250 160 80 1 3 156 41 200 1.41e-47 169
MS.gene038613.t1 AT1G34190 48.667 150 77 0 3 152 41 190 2.08e-47 171
MS.gene038613.t1 AT1G34180 46.250 160 80 1 3 156 41 200 4.90e-47 170
MS.gene038613.t1 AT3G10480 44.565 184 67 3 1 150 50 232 7.88e-47 169
MS.gene038613.t1 AT3G17730 53.488 129 60 0 2 130 30 158 2.62e-44 155
MS.gene038613.t1 AT1G34180 43.023 172 80 2 3 156 41 212 3.85e-44 160
MS.gene038613.t1 AT3G49530 46.199 171 74 4 6 172 38 194 8.64e-44 158
MS.gene038613.t1 AT1G34180 43.023 172 80 2 3 156 41 212 1.31e-43 160
MS.gene038613.t1 AT3G49530 46.199 171 74 4 6 172 38 194 1.74e-43 159
MS.gene038613.t1 AT1G33060 52.756 127 60 0 2 128 48 174 1.96e-43 161
MS.gene038613.t1 AT1G33060 52.756 127 60 0 2 128 48 174 1.96e-43 161
MS.gene038613.t1 AT1G65910 48.551 138 71 0 2 139 30 167 1.39e-42 159
MS.gene038613.t1 AT5G24590 54.098 122 55 1 9 129 44 165 1.85e-42 155
MS.gene038613.t1 AT4G35580 50.400 125 60 1 6 128 35 159 2.85e-39 148
MS.gene038613.t1 AT4G35580 50.400 125 60 1 6 128 35 159 3.57e-39 148
MS.gene038613.t1 AT4G35580 50.400 125 60 1 6 128 35 159 3.85e-39 148
MS.gene038613.t1 AT1G32870 47.826 138 68 2 8 143 40 175 1.94e-38 145
MS.gene038613.t1 AT1G32870 47.826 138 68 2 8 143 40 175 2.19e-38 145
MS.gene038613.t1 AT1G32870 47.826 138 68 2 8 143 76 211 4.21e-38 145
MS.gene038613.t1 AT4G17980 48.855 131 63 2 2 128 30 160 6.45e-38 138
MS.gene038613.t1 AT4G17980 48.855 131 63 2 2 128 30 160 1.75e-37 138
MS.gene038613.t1 AT2G27300 50.427 117 50 2 9 125 45 153 2.19e-37 139
MS.gene038613.t1 AT3G03200 50.781 128 62 1 2 128 30 157 2.36e-37 142
MS.gene038613.t1 AT5G61430 46.970 132 66 2 5 134 43 172 3.05e-37 139
MS.gene038613.t1 AT5G46590 49.231 130 62 3 2 128 30 158 4.72e-37 137
MS.gene038613.t1 AT5G39610 47.727 132 65 2 5 134 47 176 9.62e-37 136
MS.gene038613.t1 AT3G12977 47.200 125 63 2 9 132 49 171 1.65e-36 135
MS.gene038613.t1 AT1G71930 45.385 130 64 3 8 134 39 164 1.85e-36 136
MS.gene038613.t1 AT1G71930 45.385 130 64 3 8 134 39 164 1.85e-36 136
MS.gene038613.t1 AT5G17260 47.656 128 66 1 2 128 30 157 2.76e-36 139
MS.gene038613.t1 AT4G10350 47.328 131 62 2 3 129 34 161 5.23e-36 135
MS.gene038613.t1 AT1G54330 47.015 134 68 1 2 135 30 160 7.27e-36 134
MS.gene038613.t1 AT1G01720 43.590 156 77 4 9 156 38 190 9.80e-36 133
MS.gene038613.t1 AT1G33280 47.328 131 59 3 3 129 33 157 1.12e-35 134
MS.gene038613.t1 AT1G32510 43.704 135 68 2 2 128 30 164 1.15e-35 133
MS.gene038613.t1 AT1G12260 40.000 160 89 4 2 159 31 185 1.64e-35 134
MS.gene038613.t1 AT1G12260 39.752 161 88 4 2 159 31 185 1.68e-35 135
MS.gene038613.t1 AT1G62700 36.181 199 105 7 2 194 31 213 1.81e-35 135
MS.gene038613.t1 AT1G62700 36.181 199 105 7 2 194 31 213 1.81e-35 135
MS.gene038613.t1 AT5G46590 52.252 111 52 1 2 111 30 140 2.91e-35 132
MS.gene038613.t1 AT5G22290 48.305 118 54 2 8 125 51 161 4.16e-35 133
MS.gene038613.t1 AT5G07680 45.113 133 67 3 5 134 30 159 5.29e-35 132
MS.gene038613.t1 AT3G44290 46.610 118 55 2 8 125 44 153 7.43e-35 129
MS.gene038613.t1 AT5G07680 45.113 133 67 3 5 134 44 173 7.66e-35 132
MS.gene038613.t1 AT4G27410 34.146 205 132 2 2 205 38 240 8.39e-35 131
MS.gene038613.t1 AT1G77450 47.200 125 60 3 9 130 41 162 2.36e-34 129
MS.gene038613.t1 AT1G76420 47.015 134 62 4 3 130 43 173 3.40e-34 130
MS.gene038613.t1 AT2G24430 47.619 126 61 3 5 128 43 165 3.58e-34 130
MS.gene038613.t1 AT2G24430 47.619 126 61 3 5 128 43 165 3.58e-34 130
MS.gene038613.t1 AT3G29035 45.000 140 73 2 5 142 51 188 4.59e-34 129
MS.gene038613.t1 AT5G62380 47.200 125 59 3 8 129 37 157 5.80e-34 130
MS.gene038613.t1 AT5G62380 47.200 125 59 3 8 129 37 157 5.80e-34 130
MS.gene038613.t1 AT1G56010 39.869 153 82 3 1 145 38 188 6.06e-34 129
MS.gene038613.t1 AT3G44290 46.610 118 55 2 8 125 44 153 1.01e-33 129
MS.gene038613.t1 AT1G69490 41.290 155 83 4 9 159 40 190 1.21e-33 127
MS.gene038613.t1 AT1G79580 46.774 124 61 3 8 129 47 167 1.25e-33 130
MS.gene038613.t1 AT1G79580 46.774 124 61 3 8 129 47 167 1.25e-33 130
MS.gene038613.t1 AT1G79580 46.774 124 61 3 8 129 47 167 1.25e-33 130
MS.gene038613.t1 AT1G79580 46.774 124 61 3 8 129 47 167 1.25e-33 130
MS.gene038613.t1 AT1G79580 46.774 124 61 3 8 129 47 167 1.25e-33 130
MS.gene038613.t1 AT3G18400 42.308 130 72 2 5 134 32 158 2.24e-33 127
MS.gene038613.t1 AT5G08790 44.882 127 62 3 9 130 38 161 2.44e-33 127
MS.gene038613.t1 AT1G52890 42.105 133 75 1 2 134 38 168 2.93e-33 127
MS.gene038613.t1 AT3G15500 42.969 128 71 1 2 129 38 163 3.56e-33 127
MS.gene038613.t1 AT3G04060 45.038 131 67 3 4 131 46 174 4.77e-33 127
MS.gene038613.t1 AT4G36160 42.105 152 70 5 3 149 35 173 4.80e-33 128
MS.gene038613.t1 AT4G36160 42.105 152 70 5 3 149 35 173 4.80e-33 128
MS.gene038613.t1 AT2G18060 32.932 249 126 10 3 242 34 250 4.94e-33 128
MS.gene038613.t1 AT2G18060 32.932 249 126 10 3 242 34 250 4.94e-33 128
MS.gene038613.t1 AT4G36160 42.105 152 70 5 3 149 39 177 5.25e-33 128
MS.gene038613.t1 AT3G12977 50.485 103 50 1 32 133 17 119 5.91e-33 124
MS.gene038613.t1 AT5G18270 45.588 136 65 4 1 131 44 175 7.02e-33 127
MS.gene038613.t1 AT5G18270 44.853 136 66 4 1 131 44 175 7.32e-33 127
MS.gene038613.t1 AT4G27410 32.727 220 132 3 2 205 38 257 9.34e-33 126
MS.gene038613.t1 AT3G10490 54.902 102 44 2 52 152 1 101 1.07e-32 127
MS.gene038613.t1 AT3G10490 54.902 102 44 2 52 152 1 101 1.07e-32 127
MS.gene038613.t1 AT5G61430 50.476 105 50 1 32 134 5 109 2.06e-32 124
MS.gene038613.t1 AT5G53950 48.062 129 59 4 5 128 44 169 3.43e-32 126
MS.gene038613.t1 AT2G02450 42.308 130 70 3 2 130 75 200 7.48e-32 125
MS.gene038613.t1 AT2G17040 43.846 130 63 3 2 128 30 152 8.24e-32 122
MS.gene038613.t1 AT2G43000 44.882 127 67 2 3 128 43 167 8.83e-32 122
MS.gene038613.t1 AT2G02450 42.308 130 70 3 2 130 75 200 1.39e-31 125
MS.gene038613.t1 AT2G46770 41.007 139 62 4 8 129 46 181 1.44e-31 124
MS.gene038613.t1 AT5G66300 43.066 137 74 3 8 142 42 176 1.47e-31 122
MS.gene038613.t1 AT5G63790 43.307 127 64 3 9 130 91 214 2.96e-31 122
MS.gene038613.t1 AT5G63790 43.307 127 64 3 9 130 81 204 3.15e-31 122
MS.gene038613.t1 AT1G26870 43.939 132 61 4 8 128 46 175 3.46e-31 124
MS.gene038613.t1 AT4G10350 51.579 95 46 0 35 129 20 114 1.37e-30 119
MS.gene038613.t1 AT3G15170 43.704 135 68 4 5 134 47 178 2.20e-30 119
MS.gene038613.t1 AT1G61110 42.105 133 62 3 9 128 47 177 8.75e-30 118
MS.gene038613.t1 AT3G15510 41.353 133 63 3 9 128 48 178 9.55e-30 119
MS.gene038613.t1 AT5G39820 38.889 144 63 4 8 128 50 191 3.41e-29 117
MS.gene038613.t1 AT5G13180 45.736 129 62 3 9 135 45 167 3.55e-29 114
MS.gene038613.t1 AT4G28530 44.628 121 59 3 10 128 58 172 5.62e-29 116
MS.gene038613.t1 AT3G61910 39.437 142 66 3 4 128 37 175 1.34e-28 115
MS.gene038613.t1 AT1G56010 43.590 117 63 1 32 145 5 121 1.64e-28 113
MS.gene038613.t1 AT1G32770 38.462 143 71 3 2 130 40 179 2.57e-28 115
MS.gene038613.t1 AT3G04070 41.667 132 63 3 9 128 41 170 2.98e-28 114
MS.gene038613.t1 AT2G33480 45.455 121 59 2 9 129 46 159 1.35e-26 108
MS.gene038613.t1 AT2G33480 45.455 121 61 1 9 129 46 161 1.96e-26 107
MS.gene038613.t1 AT3G04070 35.811 148 65 3 9 128 41 186 2.81e-26 109
MS.gene038613.t1 AT3G12910 37.226 137 68 3 7 128 52 185 1.06e-25 106
MS.gene038613.t1 AT1G52880 40.152 132 65 3 9 128 48 177 3.51e-25 105
MS.gene038613.t1 AT4G01520 41.270 126 65 3 7 128 34 154 1.89e-24 103
MS.gene038613.t1 AT4G01540 42.063 126 64 3 7 128 34 154 3.25e-24 103
MS.gene038613.t1 AT4G01540 42.063 126 64 3 7 128 34 154 3.57e-24 104
MS.gene038613.t1 AT4G01540 42.063 126 64 3 7 128 34 154 4.04e-24 103
MS.gene038613.t1 AT4G01540 42.063 126 64 3 7 128 34 154 4.11e-24 104
MS.gene038613.t1 AT5G04395 41.803 122 57 3 2 109 52 173 2.00e-23 97.4
MS.gene038613.t1 AT2G33480 47.368 95 50 0 35 129 10 104 1.37e-22 95.5
MS.gene038613.t1 AT4G01550 35.484 186 95 8 1 174 27 199 9.04e-22 97.4
MS.gene038613.t1 AT3G04420 38.333 120 69 2 9 128 36 150 3.53e-20 90.9
MS.gene038613.t1 AT3G04420 38.333 120 69 1 9 128 36 150 9.71e-20 90.5
MS.gene038613.t1 AT5G22380 35.659 129 78 4 7 130 36 164 1.48e-19 87.8
MS.gene038613.t1 AT3G44350 35.938 128 78 4 7 130 35 162 1.92e-19 87.4
MS.gene038613.t1 AT2G18060 30.366 191 97 8 58 242 2 162 1.32e-18 85.9
MS.gene038613.t1 AT1G02230 42.000 100 52 2 7 103 34 130 1.40e-18 87.0
MS.gene038613.t1 AT3G44350 36.508 126 76 4 7 128 35 160 7.56e-18 80.9
MS.gene038613.t1 AT2G43000 42.529 87 49 1 43 128 3 89 9.90e-18 81.6
MS.gene038613.t1 AT1G02220 35.714 112 64 3 15 126 42 145 6.98e-17 82.4
MS.gene038613.t1 AT1G02250 39.000 100 55 2 7 103 34 130 8.56e-17 82.0
MS.gene038613.t1 AT5G22290 46.269 67 30 1 59 125 2 62 9.80e-17 79.7
MS.gene038613.t1 AT4G28530 40.244 82 45 2 10 89 58 137 5.17e-14 73.2

Find 137 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATATTGTGCACCATTCC+TGG 0.177058 8.3:-38678638 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.199186 8.3:-38678664 None:intergenic
TTATTAACAGCTTGATGATA+TGG 0.240806 8.3:-38679204 None:intergenic
CTCCATGCTATTGGATATAA+TGG 0.269719 8.3:+38678781 MS.gene038613:CDS
CCCAGGAATGGTGCACAATA+TGG 0.271510 8.3:+38678637 MS.gene038613:CDS
CCTATTTGACATTCATTTGC+AGG 0.281187 8.3:-38679072 None:intergenic
CCTTTCCAGTATGAAATATC+AGG 0.282193 8.3:-38677818 None:intergenic
ATCCAATAGCATGGAGATTC+TGG 0.283199 8.3:-38678774 None:intergenic
CCTGTTTGACATGAATTTGC+AGG 0.309691 8.3:-38678904 None:intergenic
CCTGCAAATTCATGTCAAAT+AGG 0.314809 8.3:+38678946 MS.gene038613:CDS
CCTGTTTGACGTGAATTTGC+AGG 0.316892 8.3:-38679111 None:intergenic
CCTGCAAATGAATGTCAAAT+AGG 0.318011 8.3:+38679072 MS.gene038613:CDS
CCTATTTGACATGAATTTGC+AGG 0.318113 8.3:-38678946 None:intergenic
TTATCTCCAAAACGGTGATT+TGG 0.320011 8.3:+38677653 MS.gene038613:CDS
ATGAATCGATCTACGGAAAC+AGG 0.329353 8.3:+38677726 MS.gene038613:CDS
ATCTAGACTCCGAGATGTTC+TGG 0.337030 8.3:+38679714 MS.gene038613:CDS
GACCAGAATCTCCATGCTAT+TGG 0.337192 8.3:+38678772 MS.gene038613:CDS
CCTGTTTGACATGAATTTGC+TGG 0.344593 8.3:-38678850 None:intergenic
GATCTACGGAAACAGGGTTT+TGG 0.358106 8.3:+38677733 MS.gene038613:CDS
ACCACTCCAAATCACCGTTT+TGG 0.358606 8.3:-38677659 None:intergenic
CCTTCAAATTCATGTCAAAC+AGG 0.368528 8.3:+38679030 MS.gene038613:CDS
TGACATTCATTTGCAGGATC+GGG 0.375493 8.3:-38679066 None:intergenic
GGATGACTACTTGGATTTCA+TGG 0.384800 8.3:+38679682 MS.gene038613:CDS
TTTGGGAGACCTGGATTGCT+TGG 0.388164 8.3:+38679607 MS.gene038613:CDS
AATGCTGACTTTAGCACATA+TGG 0.392151 8.3:+38679644 MS.gene038613:CDS
TTGGGAGACCTGGATTGCTT+GGG 0.394189 8.3:+38679608 MS.gene038613:CDS
ATGTGCTAAAGTCAGCATTC+TGG 0.394807 8.3:-38679640 None:intergenic
GACTGATAGAGGAATTGTTC+AGG 0.397382 8.3:+38677902 MS.gene038613:CDS
CTCGTGGGGATCGTACTGAT+TGG 0.405759 8.3:+38677844 MS.gene038613:CDS
AAGTCAGCATTCTGGCCAAC+AGG 0.430726 8.3:-38679632 None:intergenic
CACATATGGAATGGCTCCTA+CGG 0.432097 8.3:+38679658 MS.gene038613:CDS
GATAAGGATTTGACTGATAG+AGG 0.435530 8.3:+38677891 MS.gene038613:CDS
CCATATTGTGCACCATTCCT+GGG 0.435926 8.3:-38678637 None:intergenic
AAAACCCTGATATTTCATAC+TGG 0.438226 8.3:+38677813 MS.gene038613:CDS
TGACATGAATTTGCAGGGTA+GGG 0.440925 8.3:-38678940 None:intergenic
TGACATGAATTTGCAGGGTC+GGG 0.444499 8.3:-38678898 None:intergenic
TGTCCGATAGGGAAGAAGTA+TGG 0.449188 8.3:+38677690 MS.gene038613:CDS
TGACATGAATTTGCTGGATC+GGG 0.450774 8.3:-38678844 None:intergenic
CCTGTTTGACATGAATTTGA+AGG 0.451294 8.3:-38679030 None:intergenic
CCTGCAAATTCACGTCAAAC+AGG 0.452097 8.3:+38679111 MS.gene038613:CDS
TGACGTGAATTTGCAGGGTC+GGG 0.454809 8.3:-38679105 None:intergenic
TGTCAAACAGGATTACAAAC+AGG 0.456291 8.3:+38678862 MS.gene038613:CDS
CCAGCAAATTCATGTCAAAC+AGG 0.459332 8.3:+38678850 MS.gene038613:CDS
CAACAGGTCCCAAGCAATCC+AGG 0.459478 8.3:-38679616 None:intergenic
CCTGTGAATTCATGTCAAAC+AGG 0.460258 8.3:+38678988 MS.gene038613:CDS
TGACATGAATTTGAAGGGTC+GGG 0.460660 8.3:-38679024 None:intergenic
CAACAGAATAATCAAATTGT+GGG 0.461766 8.3:+38677783 MS.gene038613:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.462659 8.3:+38677875 MS.gene038613:CDS
TTGACATTCATTTGCAGGAT+CGG 0.462975 8.3:-38679067 None:intergenic
CCAGGAATGGTGCACAATAT+GGG 0.464995 8.3:+38678638 MS.gene038613:CDS
ATTGGGTTATGCATGAGTAT+AGG 0.467758 8.3:+38677862 MS.gene038613:CDS
ATATCCATGCCATGTCAATC+AGG 0.469355 8.3:+38678808 MS.gene038613:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.469358 8.3:+38678904 MS.gene038613:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 8.3:+38678620 MS.gene038613:CDS
CATATACAAATACGCACCTT+GGG 0.480163 8.3:+38677521 MS.gene038613:CDS
TTGACGTGAATTTGCAGGGT+CGG 0.485241 8.3:-38679106 None:intergenic
TTGACATGAATTTGCAGGGT+AGG 0.487996 8.3:-38678941 None:intergenic
AGTGCAGCTGGCTCAGCAAA+TGG 0.489746 8.3:-38678706 None:intergenic
AAAGTGGGAGCTAGTGCAGC+TGG 0.489936 8.3:-38678718 None:intergenic
TCGTGGGGATCGTACTGATT+GGG 0.493211 8.3:+38677845 MS.gene038613:CDS
AACCATTTAATGAGGAAGAC+TGG 0.493900 8.3:+38678662 MS.gene038613:CDS
CTGGATTGCTTGGGACCTGT+TGG 0.494191 8.3:+38679617 MS.gene038613:CDS
GATTTATCTTATCTCCAAAA+CGG 0.496570 8.3:+38677645 MS.gene038613:intron
CCTGTTTGACATGAATTCAC+AGG 0.497735 8.3:-38678988 None:intergenic
AAATTCATGTAAAACAAGAT+TGG 0.499270 8.3:+38679155 MS.gene038613:CDS
AATCTGTAAGGTATTTCAAA+AGG 0.505571 8.3:+38678603 MS.gene038613:CDS
TGATGATATGGATTATCCAC+AGG 0.510471 8.3:-38679192 None:intergenic
CTTCCATACTTCTTCCCTAT+CGG 0.514378 8.3:-38677693 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.514389 8.3:-38678899 None:intergenic
TTGACATGAATTTGCTGGAT+CGG 0.514396 8.3:-38678845 None:intergenic
ACATATACAAATACGCACCT+TGG 0.514869 8.3:+38677520 MS.gene038613:CDS
CTGTTTGACATGAATTTGAA+GGG 0.516573 8.3:-38679029 None:intergenic
ACATATGGAATGGCTCCTAC+GGG 0.521147 8.3:+38679659 MS.gene038613:CDS
GAATTTGCAGGGTCGGGAGA+AGG 0.521896 8.3:-38678892 None:intergenic
CTGTTTGACGTGAATTTGCA+GGG 0.521995 8.3:-38679110 None:intergenic
GGATTCCTATGTAATCTGTA+AGG 0.523374 8.3:+38678591 MS.gene038613:intron
AGAAGTATGGAAGTGGGTCG+AGG 0.523425 8.3:+38677703 MS.gene038613:CDS
TCAACAGAATAATCAAATTG+TGG 0.524176 8.3:+38677782 MS.gene038613:CDS
TGGTATTTCTTCTGTCCGAT+AGG 0.528063 8.3:+38677678 MS.gene038613:CDS
TTGACATGAATTTGAAGGGT+CGG 0.530544 8.3:-38679025 None:intergenic
CTGTTTGACATGAATTTGCA+GGG 0.532638 8.3:-38678903 None:intergenic
GAGTGCTGCGGAACCTAAGT+TGG 0.533048 8.3:+38679739 MS.gene038613:CDS
CAATCCTGATTGACATGGCA+TGG 0.533909 8.3:-38678812 None:intergenic
TATGGATTATCCACAGGGTC+GGG 0.534846 8.3:-38679186 None:intergenic
AAATACCTTACAGATTACAT+AGG 0.536956 8.3:-38678596 None:intergenic
AACCATTATATCCAATAGCA+TGG 0.540691 8.3:-38678783 None:intergenic
GAATTTGCTGGATCGGGAGA+AGG 0.544144 8.3:-38678838 None:intergenic
TTATCCACAGGGTCGGGAGA+AGG 0.544235 8.3:-38679180 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8.3:-38679234 None:intergenic
GAATTTGAAGGGTCGGGAGA+CGG 0.546357 8.3:-38679018 None:intergenic
CTTTCCAGTATGAAATATCA+GGG 0.551975 8.3:-38677817 None:intergenic
GGTATTTCTTCTGTCCGATA+GGG 0.553898 8.3:+38677679 MS.gene038613:CDS
TGTAAGGTATTTCAAAAGGA+AGG 0.556870 8.3:+38678607 MS.gene038613:CDS
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 8.3:+38678625 MS.gene038613:CDS
GAATTTGCAGGGTAGGGAGA+AGG 0.564019 8.3:-38678934 None:intergenic
GACTGGAGTGATGATGAAGT+AGG 0.564465 8.3:+38678679 MS.gene038613:CDS
TCATTTGCAGGATCGGGAGA+CGG 0.564896 8.3:-38679060 None:intergenic
GGCCAGGAAAACAATGCTGA+AGG 0.577250 8.3:+38679557 MS.gene038613:intron
AAATTCACGTCAAACAGGAT+TGG 0.579546 8.3:+38679116 MS.gene038613:CDS
ATAGGGAAGAAGTATGGAAG+TGG 0.581783 8.3:+38677696 MS.gene038613:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.582263 8.3:+38678613 MS.gene038613:CDS
CAAACAGGATTGGAGCTGAC+TGG 0.586067 8.3:+38679126 MS.gene038613:CDS
TTAGATGTCACAGGCAAAGT+GGG 0.587463 8.3:-38678733 None:intergenic
TACTGGAAAGGCACCTCGTG+GGG 0.589079 8.3:+38677830 MS.gene038613:CDS
ACAAAACTATTAGATGTCAC+AGG 0.590588 8.3:-38678742 None:intergenic
ATATGGATTATCCACAGGGT+CGG 0.591025 8.3:-38679187 None:intergenic
CTGTTTGACATGAATTCACA+GGG 0.594081 8.3:-38678987 None:intergenic
CCTGATATTTCATACTGGAA+AGG 0.594945 8.3:+38677818 MS.gene038613:CDS
CTATTTGACATGAATTTGCA+GGG 0.594947 8.3:-38678945 None:intergenic
ATATGGGAAACCATTTAATG+AGG 0.595239 8.3:+38678654 MS.gene038613:CDS
AGCACTCTGCCAGAACATCT+CGG 0.596496 8.3:-38679723 None:intergenic
ATATGGAATGGCTCCTACGG+GGG 0.599399 8.3:+38679661 MS.gene038613:CDS
TAACTACCTGGGAGATCCCA+AGG 0.602529 8.3:-38677537 None:intergenic
TTTGCAGGGTAGGGAGAAGG+TGG 0.603489 8.3:-38678931 None:intergenic
ATTAGATGTCACAGGCAAAG+TGG 0.604507 8.3:-38678734 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.606475 8.3:-38678631 None:intergenic
TACGCACCTTGGGATCTCCC+AGG 0.607324 8.3:+38677531 MS.gene038613:CDS
TGACTTTAGCACATATGGAA+TGG 0.611122 8.3:+38679649 MS.gene038613:CDS
GTCGAGGATGAATCGATCTA+CGG 0.611940 8.3:+38677719 MS.gene038613:CDS
TCCAAAACGGTGATTTGGAG+TGG 0.615601 8.3:+38677658 MS.gene038613:CDS
GGCATCAATCCTGATTGACA+TGG 0.616405 8.3:-38678817 None:intergenic
TTTGCAGGGTCGGGAGAAGG+CGG 0.617658 8.3:-38678889 None:intergenic
ATACTGGAAAGGCACCTCGT+GGG 0.623402 8.3:+38677829 MS.gene038613:CDS
GAATTCACAGGGTCTACAGA+AGG 0.634919 8.3:-38678976 None:intergenic
AACAGAATAATCAAATTGTG+GGG 0.640227 8.3:+38677784 MS.gene038613:CDS
CATACTGGAAAGGCACCTCG+TGG 0.642917 8.3:+38677828 MS.gene038613:CDS
CTTCAAATTCATGTCAAACA+GGG 0.645767 8.3:+38679031 MS.gene038613:CDS
TGAATCGATCTACGGAAACA+GGG 0.649117 8.3:+38677727 MS.gene038613:CDS
GATGTTCTGGCAGAGTGCTG+CGG 0.652067 8.3:+38679727 MS.gene038613:CDS
CGACGATGACATATTGCCTG+AGG 0.662048 8.3:+38679299 MS.gene038613:CDS
GGTGCCTTCTCCCGACCCTG+TGG 0.663863 8.3:+38679176 MS.gene038613:CDS
TAGGGAAGAAGTATGGAAGT+GGG 0.665858 8.3:+38677697 MS.gene038613:CDS
CATATGGAATGGCTCCTACG+GGG 0.681907 8.3:+38679660 MS.gene038613:CDS
GATGATATGGATTATCCACA+GGG 0.707549 8.3:-38679191 None:intergenic
GATGATATGAATTATCCACA+GGG 0.739152 8.3:-38679233 None:intergenic
CAATCAGTACGATCCCCACG+AGG 0.773083 8.3:-38677843 None:intergenic
TGTTAATAATGATGACCCTG+TGG 0.779783 8.3:+38679218 MS.gene038613:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAACATATTTCTATTTCA+AGG - chr8.3:38678311-38678330 None:intergenic 15.0%
!!! ATAGAAATATGTTATTTCAT+TGG + chr8.3:38678315-38678334 MS.gene038613:intron 15.0%
!!! GCATATTTTAATCATTTAAT+TGG + chr8.3:38678496-38678515 MS.gene038613:intron 15.0%
!! AAATTCATGTAAAACAAGAT+TGG + chr8.3:38679155-38679174 MS.gene038613:CDS 20.0%
!! AATGATTAAAATATGCAAGA+AGG - chr8.3:38678492-38678511 None:intergenic 20.0%
!! ATCACAATCATTTAGTAAAA+TGG - chr8.3:38679483-38679502 None:intergenic 20.0%
!! ATTAACATGATTCTATTTCA+AGG - chr8.3:38678409-38678428 None:intergenic 20.0%
!! GATTCATAGATATATTACAT+TGG + chr8.3:38678143-38678162 MS.gene038613:intron 20.0%
!!! AATTACTATGAGCTTTATTA+GGG + chr8.3:38677960-38677979 MS.gene038613:intron 20.0%
!!! TGATGTTTCTTTTTTATGTA+TGG + chr8.3:38679378-38679397 MS.gene038613:intron 20.0%
! AAAATGGCATTAACATTATG+AGG - chr8.3:38679467-38679486 None:intergenic 25.0%
! AAATACCTTACAGATTACAT+AGG - chr8.3:38678599-38678618 None:intergenic 25.0%
! AACAGAATAATCAAATTGTG+GGG + chr8.3:38677784-38677803 MS.gene038613:CDS 25.0%
! AATGTATTCACAATGAAAAC+AGG - chr8.3:38678534-38678553 None:intergenic 25.0%
! CAACAGAATAATCAAATTGT+GGG + chr8.3:38677783-38677802 MS.gene038613:CDS 25.0%
! GAAAACAAAAAAACACAAGA+AGG - chr8.3:38679346-38679365 None:intergenic 25.0%
! GATTTATCTTATCTCCAAAA+CGG + chr8.3:38677645-38677664 MS.gene038613:intron 25.0%
! GGATTCAACAAAAGTAAAAT+AGG - chr8.3:38678388-38678407 None:intergenic 25.0%
! GTGAAATTAATTAACTACCT+GGG - chr8.3:38677551-38677570 None:intergenic 25.0%
! TCAACAGAATAATCAAATTG+TGG + chr8.3:38677782-38677801 MS.gene038613:CDS 25.0%
! TGTGAAATTAATTAACTACC+TGG - chr8.3:38677552-38677571 None:intergenic 25.0%
!! AAAAACAGCAAATCTCATTT+TGG - chr8.3:38678450-38678469 None:intergenic 25.0%
!! AAAACAGCAAATCTCATTTT+GGG - chr8.3:38678449-38678468 None:intergenic 25.0%
!! AATCTGTAAGGTATTTCAAA+AGG + chr8.3:38678603-38678622 MS.gene038613:CDS 25.0%
!! ACATTTTTAACAAGCTCTTT+TGG + chr8.3:38678549-38678568 MS.gene038613:intron 25.0%
!! CTGAATACTGACATTATTTT+TGG + chr8.3:38679536-38679555 MS.gene038613:intron 25.0%
!! TTATTAACAGCTTGATGATA+TGG - chr8.3:38679207-38679226 None:intergenic 25.0%
!!! CTTGTGTTTTTTTGTTTTCT+TGG + chr8.3:38679347-38679366 MS.gene038613:intron 25.0%
!!! GAATTACTATGAGCTTTATT+AGG + chr8.3:38677959-38677978 MS.gene038613:intron 25.0%
!!! TAAGTTAGCATTTTGATATG+TGG + chr8.3:38677990-38678009 MS.gene038613:intron 25.0%
!!! TTGTTTTACATGAATTTGCA+GGG - chr8.3:38679152-38679171 None:intergenic 25.0%
AAAACCCTGATATTTCATAC+TGG + chr8.3:38677813-38677832 MS.gene038613:CDS 30.0%
AACCATTATATCCAATAGCA+TGG - chr8.3:38678786-38678805 None:intergenic 30.0%
ACAAAACTATTAGATGTCAC+AGG - chr8.3:38678745-38678764 None:intergenic 30.0%
AGTAAAATAGGCACTTCATA+AGG - chr8.3:38678376-38678395 None:intergenic 30.0%
ATATGGGAAACCATTTAATG+AGG + chr8.3:38678654-38678673 MS.gene038613:CDS 30.0%
CTATTTGACATGAATTTGCA+GGG - chr8.3:38678948-38678967 None:intergenic 30.0%
CTGTTTGACATGAATTTGAA+GGG - chr8.3:38679032-38679051 None:intergenic 30.0%
CTTCAAATTCATGTCAAACA+GGG + chr8.3:38679031-38679050 MS.gene038613:CDS 30.0%
CTTTCCAGTATGAAATATCA+GGG - chr8.3:38677820-38677839 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG - chr8.3:38679236-38679255 None:intergenic 30.0%
TATTCACAATGAAAACAGGA+CGG - chr8.3:38678530-38678549 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG - chr8.3:38679237-38679256 None:intergenic 30.0%
! AATTTTGCATGCACATGTAT+AGG + chr8.3:38678280-38678299 MS.gene038613:intron 30.0%
! GGTTTGTCTTTTTAAATCAC+AGG + chr8.3:38678570-38678589 MS.gene038613:intron 30.0%
! TGTAAGGTATTTCAAAAGGA+AGG + chr8.3:38678607-38678626 MS.gene038613:CDS 30.0%
! TTTGTGTTTTCTACTCTTGT+AGG + chr8.3:38679403-38679422 MS.gene038613:intron 30.0%
!!! AACTGACTTTTTTGATGGTT+TGG + chr8.3:38679589-38679608 MS.gene038613:CDS 30.0%
!!! ACTGACTTTTTTGATGGTTT+GGG + chr8.3:38679590-38679609 MS.gene038613:CDS 30.0%
!!! CTATCAACTGACTTTTTTGA+TGG + chr8.3:38679584-38679603 MS.gene038613:CDS 30.0%
!!! CTGTTTTTACATGATGAAGT+TGG + chr8.3:38678462-38678481 MS.gene038613:intron 30.0%
!!! CTTGTTTTACATGAATTTGC+AGG - chr8.3:38679153-38679172 None:intergenic 30.0%
!!! GCATTTTAAAGTTTGAAGTG+TGG + chr8.3:38678226-38678245 MS.gene038613:intron 30.0%
AAATTCACGTCAAACAGGAT+TGG + chr8.3:38679116-38679135 MS.gene038613:CDS 35.0%
AACCATTTAATGAGGAAGAC+TGG + chr8.3:38678662-38678681 MS.gene038613:CDS 35.0%
AATAGGCACTTCATAAGGTA+AGG - chr8.3:38678371-38678390 None:intergenic 35.0%
AATGCCATTAGTGACATAGT+AGG - chr8.3:38678183-38678202 None:intergenic 35.0%
ACATATACAAATACGCACCT+TGG + chr8.3:38677520-38677539 MS.gene038613:CDS 35.0%
AGCGACTCTTGATTTCTTTA+AGG + chr8.3:38679509-38679528 MS.gene038613:intron 35.0%
ATTGGGTTATGCATGAGTAT+AGG + chr8.3:38677862-38677881 MS.gene038613:CDS 35.0%
CATATACAAATACGCACCTT+GGG + chr8.3:38677521-38677540 MS.gene038613:CDS 35.0%
CCTATTTGACATGAATTTGC+AGG - chr8.3:38678949-38678968 None:intergenic 35.0%
CCTATTTGACATTCATTTGC+AGG - chr8.3:38679075-38679094 None:intergenic 35.0%
CCTGATATTTCATACTGGAA+AGG + chr8.3:38677818-38677837 MS.gene038613:CDS 35.0%
CCTGCAAATGAATGTCAAAT+AGG + chr8.3:38679072-38679091 MS.gene038613:CDS 35.0%
CCTGCAAATTCATGTCAAAT+AGG + chr8.3:38678946-38678965 MS.gene038613:CDS 35.0%
CCTGTTTGACATGAATTTGA+AGG - chr8.3:38679033-38679052 None:intergenic 35.0%
CCTTCAAATTCATGTCAAAC+AGG + chr8.3:38679030-38679049 MS.gene038613:CDS 35.0%
CCTTTCCAGTATGAAATATC+AGG - chr8.3:38677821-38677840 None:intergenic 35.0%
CTCCATGCTATTGGATATAA+TGG + chr8.3:38678781-38678800 MS.gene038613:CDS 35.0%
CTGTTTGACATGAATTCACA+GGG - chr8.3:38678990-38679009 None:intergenic 35.0%
CTGTTTGACATGAATTTGCA+GGG - chr8.3:38678906-38678925 None:intergenic 35.0%
GATAAGGATTTGACTGATAG+AGG + chr8.3:38677891-38677910 MS.gene038613:CDS 35.0%
GGATTCCTATGTAATCTGTA+AGG + chr8.3:38678591-38678610 MS.gene038613:intron 35.0%
TGACTTTAGCACATATGGAA+TGG + chr8.3:38679649-38679668 MS.gene038613:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG + chr8.3:38677875-38677894 MS.gene038613:CDS 35.0%
TGTCAAACAGGATTACAAAC+AGG + chr8.3:38678862-38678881 MS.gene038613:CDS 35.0%
TGTTAATAATGATGACCCTG+TGG + chr8.3:38679218-38679237 MS.gene038613:CDS 35.0%
TTATCTCCAAAACGGTGATT+TGG + chr8.3:38677653-38677672 MS.gene038613:CDS 35.0%
TTATGTGCATCCACAATCAA+AGG - chr8.3:38678032-38678051 None:intergenic 35.0%
TTGACATGAATTTGAAGGGT+CGG - chr8.3:38679028-38679047 None:intergenic 35.0%
TTGACATTCATTTGCAGGAT+CGG - chr8.3:38679070-38679089 None:intergenic 35.0%
! GATGATATGGATTATCCACA+GGG - chr8.3:38679194-38679213 None:intergenic 35.0%
! TGATGATATGGATTATCCAC+AGG - chr8.3:38679195-38679214 None:intergenic 35.0%
!! AATGCTGACTTTAGCACATA+TGG + chr8.3:38679644-38679663 MS.gene038613:CDS 35.0%
!! ACTCTTAGTGTTGATGCTAT+TGG + chr8.3:38678063-38678082 MS.gene038613:intron 35.0%
!! TTGACATGAATTTGCTGGAT+CGG - chr8.3:38678848-38678867 None:intergenic 35.0%
!!! TACTGACATTATTTTTGGCC+AGG + chr8.3:38679541-38679560 MS.gene038613:intron 35.0%
ATATCCATGCCATGTCAATC+AGG + chr8.3:38678808-38678827 MS.gene038613:CDS 40.0%
ATCCAATAGCATGGAGATTC+TGG - chr8.3:38678777-38678796 None:intergenic 40.0%
ATGAATCGATCTACGGAAAC+AGG + chr8.3:38677726-38677745 MS.gene038613:CDS 40.0%
ATGTGCTAAAGTCAGCATTC+TGG - chr8.3:38679643-38679662 None:intergenic 40.0%
ATTAGATGTCACAGGCAAAG+TGG - chr8.3:38678737-38678756 None:intergenic 40.0%
ATTGACCTCCTCTAAATGTG+GGG + chr8.3:38678200-38678219 MS.gene038613:intron 40.0%
CATTGACCTCCTCTAAATGT+GGG + chr8.3:38678199-38678218 MS.gene038613:intron 40.0%
CCAGCAAATTCATGTCAAAC+AGG + chr8.3:38678850-38678869 MS.gene038613:CDS 40.0%
CCTGCAAATTCATGTCAAAC+AGG + chr8.3:38678904-38678923 MS.gene038613:CDS 40.0%
CCTGTGAATTCATGTCAAAC+AGG + chr8.3:38678988-38679007 MS.gene038613:CDS 40.0%
CCTGTTTGACATGAATTCAC+AGG - chr8.3:38678991-38679010 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG - chr8.3:38678853-38678872 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG - chr8.3:38678853-38678872 None:intergenic 40.0%
CTCCAGTCTTCCTCATTAAA+TGG - chr8.3:38678667-38678686 None:intergenic 40.0%
CTGTTTGACGTGAATTTGCA+GGG - chr8.3:38679113-38679132 None:intergenic 40.0%
CTTCCATACTTCTTCCCTAT+CGG - chr8.3:38677696-38677715 None:intergenic 40.0%
GAAACAGATAAGCATACCTC+AGG - chr8.3:38679318-38679337 None:intergenic 40.0%
GACTGATAGAGGAATTGTTC+AGG + chr8.3:38677902-38677921 MS.gene038613:CDS 40.0%
GGATGACTACTTGGATTTCA+TGG + chr8.3:38679682-38679701 MS.gene038613:CDS 40.0%
GGTATTTCTTCTGTCCGATA+GGG + chr8.3:38677679-38677698 MS.gene038613:CDS 40.0%
GTATTTCAAAAGGAAGGTCC+TGG + chr8.3:38678613-38678632 MS.gene038613:CDS 40.0%
TCCACCTACTATGTCACTAA+TGG + chr8.3:38678176-38678195 MS.gene038613:intron 40.0%
TGAAGTTGTGCCTTTGATTG+TGG + chr8.3:38678019-38678038 MS.gene038613:intron 40.0%
TGAATCGATCTACGGAAACA+GGG + chr8.3:38677727-38677746 MS.gene038613:CDS 40.0%
TGACATGAATTTGAAGGGTC+GGG - chr8.3:38679027-38679046 None:intergenic 40.0%
TGACATGAATTTGCAGGGTA+GGG - chr8.3:38678943-38678962 None:intergenic 40.0%
TGACATTCATTTGCAGGATC+GGG - chr8.3:38679069-38679088 None:intergenic 40.0%
TGGTATTTCTTCTGTCCGAT+AGG + chr8.3:38677678-38677697 MS.gene038613:CDS 40.0%
TTAGATGTCACAGGCAAAGT+GGG - chr8.3:38678736-38678755 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+AGG - chr8.3:38678902-38678921 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+CGG - chr8.3:38678902-38678921 None:intergenic 40.0%
! ATAGGGAAGAAGTATGGAAG+TGG + chr8.3:38677696-38677715 MS.gene038613:CDS 40.0%
! ATATGGATTATCCACAGGGT+CGG - chr8.3:38679190-38679209 None:intergenic 40.0%
! TAGGGAAGAAGTATGGAAGT+GGG + chr8.3:38677697-38677716 MS.gene038613:CDS 40.0%
!! TGACATGAATTTGCTGGATC+GGG - chr8.3:38678847-38678866 None:intergenic 40.0%
!!! GTTTTGGAAAGCTACTGGTA+AGG + chr8.3:38677749-38677768 MS.gene038613:CDS 40.0%
AATGCAACCCCCACATTTAG+AGG - chr8.3:38678211-38678230 None:intergenic 45.0%
ACATATGGAATGGCTCCTAC+GGG + chr8.3:38679659-38679678 MS.gene038613:CDS 45.0%
AGGAGACAATGCAAACTGCA+GGG - chr8.3:38679447-38679466 None:intergenic 45.0%
AGGCACTTCATAAGGTAAGG+AGG - chr8.3:38678368-38678387 None:intergenic 45.0%
ATCTAGACTCCGAGATGTTC+TGG + chr8.3:38679714-38679733 MS.gene038613:CDS 45.0%
CAATCCTGATTGACATGGCA+TGG - chr8.3:38678815-38678834 None:intergenic 45.0%
CACATATGGAATGGCTCCTA+CGG + chr8.3:38679658-38679677 MS.gene038613:CDS 45.0%
CCAGGAATGGTGCACAATAT+GGG + chr8.3:38678638-38678657 MS.gene038613:CDS 45.0%
CCATATTGTGCACCATTCCT+GGG - chr8.3:38678640-38678659 None:intergenic 45.0%
CCTGCAAATTCACGTCAAAC+AGG + chr8.3:38679111-38679130 MS.gene038613:CDS 45.0%
CCTGTTTGACGTGAATTTGC+AGG - chr8.3:38679114-38679133 None:intergenic 45.0%
GAATTCACAGGGTCTACAGA+AGG - chr8.3:38678979-38678998 None:intergenic 45.0%
GACCAGAATCTCCATGCTAT+TGG + chr8.3:38678772-38678791 MS.gene038613:CDS 45.0%
GCCATTAGTGACATAGTAGG+TGG - chr8.3:38678180-38678199 None:intergenic 45.0%
GGCATCAATCCTGATTGACA+TGG - chr8.3:38678820-38678839 None:intergenic 45.0%
GTCGAGGATGAATCGATCTA+CGG + chr8.3:38677719-38677738 MS.gene038613:CDS 45.0%
TGACATGAATTTGCAGGGTC+GGG - chr8.3:38678901-38678920 None:intergenic 45.0%
TGTCCGATAGGGAAGAAGTA+TGG + chr8.3:38677690-38677709 MS.gene038613:CDS 45.0%
TTGACCTCCTCTAAATGTGG+GGG + chr8.3:38678201-38678220 MS.gene038613:intron 45.0%
TTGACGTGAATTTGCAGGGT+CGG - chr8.3:38679109-38679128 None:intergenic 45.0%
! ACCACTCCAAATCACCGTTT+TGG - chr8.3:38677662-38677681 None:intergenic 45.0%
! CACCTTCAGCATTGTTTTCC+TGG - chr8.3:38679562-38679581 None:intergenic 45.0%
! GACTGGAGTGATGATGAAGT+AGG + chr8.3:38678679-38678698 MS.gene038613:CDS 45.0%
! GATCTACGGAAACAGGGTTT+TGG + chr8.3:38677733-38677752 MS.gene038613:CDS 45.0%
! GCATTGACCTCCTCTAAATG+TGG + chr8.3:38678198-38678217 MS.gene038613:intron 45.0%
! TATGGATTATCCACAGGGTC+GGG - chr8.3:38679189-38679208 None:intergenic 45.0%
! TCCAAAACGGTGATTTGGAG+TGG + chr8.3:38677658-38677677 MS.gene038613:CDS 45.0%
!! TTTTGATGGTTTGGGAGACC+TGG + chr8.3:38679598-38679617 MS.gene038613:CDS 45.0%
!!! ACAGGGTTTTGGAAAGCTAC+TGG + chr8.3:38677744-38677763 MS.gene038613:CDS 45.0%
AAGTCAGCATTCTGGCCAAC+AGG - chr8.3:38679635-38679654 None:intergenic 50.0%
AGCACTCTGCCAGAACATCT+CGG - chr8.3:38679726-38679745 None:intergenic 50.0%
ATATGGAATGGCTCCTACGG+GGG + chr8.3:38679661-38679680 MS.gene038613:CDS 50.0%
CAAACAGGATTGGAGCTGAC+TGG + chr8.3:38679126-38679145 MS.gene038613:CDS 50.0%
CATATGGAATGGCTCCTACG+GGG + chr8.3:38679660-38679679 MS.gene038613:CDS 50.0%
CCCAGGAATGGTGCACAATA+TGG + chr8.3:38678637-38678656 MS.gene038613:CDS 50.0%
CCCATATTGTGCACCATTCC+TGG - chr8.3:38678641-38678660 None:intergenic 50.0%
CGACGATGACATATTGCCTG+AGG + chr8.3:38679299-38679318 MS.gene038613:CDS 50.0%
GAATTTGAAGGGTCGGGAGA+CGG - chr8.3:38679021-38679040 None:intergenic 50.0%
GAATTTGCAGGGTAGGGAGA+AGG - chr8.3:38678937-38678956 None:intergenic 50.0%
GAGGAGACAATGCAAACTGC+AGG - chr8.3:38679448-38679467 None:intergenic 50.0%
GGAGACAATGCAAACTGCAG+GGG - chr8.3:38679446-38679465 None:intergenic 50.0%
GGCCAGGAAAACAATGCTGA+AGG + chr8.3:38679557-38679576 MS.gene038613:intron 50.0%
TAACTACCTGGGAGATCCCA+AGG - chr8.3:38677540-38677559 None:intergenic 50.0%
TCATTTGCAGGATCGGGAGA+CGG - chr8.3:38679063-38679082 None:intergenic 50.0%
TGACGTGAATTTGCAGGGTC+GGG - chr8.3:38679108-38679127 None:intergenic 50.0%
TTGGGAGACCTGGATTGCTT+GGG + chr8.3:38679608-38679627 MS.gene038613:CDS 50.0%
TTTGGGAGACCTGGATTGCT+TGG + chr8.3:38679607-38679626 MS.gene038613:CDS 50.0%
! AGAAGTATGGAAGTGGGTCG+AGG + chr8.3:38677703-38677722 MS.gene038613:CDS 50.0%
!! ATACTGGAAAGGCACCTCGT+GGG + chr8.3:38677829-38677848 MS.gene038613:CDS 50.0%
!! GAATTTGCTGGATCGGGAGA+AGG - chr8.3:38678841-38678860 None:intergenic 50.0%
!! TCGTGGGGATCGTACTGATT+GGG + chr8.3:38677845-38677864 MS.gene038613:CDS 50.0%
AAAAGGAAGGTCCTGGTCCC+AGG + chr8.3:38678620-38678639 MS.gene038613:CDS 55.0%
AAAGTGGGAGCTAGTGCAGC+TGG - chr8.3:38678721-38678740 None:intergenic 55.0%
CAACAGGTCCCAAGCAATCC+AGG - chr8.3:38679619-38679638 None:intergenic 55.0%
CAATCAGTACGATCCCCACG+AGG - chr8.3:38677846-38677865 None:intergenic 55.0%
CTGGATTGCTTGGGACCTGT+TGG + chr8.3:38679617-38679636 MS.gene038613:CDS 55.0%
GAATTTGCAGGGTCGGGAGA+AGG - chr8.3:38678895-38678914 None:intergenic 55.0%
GCAACCCCCACATTTAGAGG+AGG - chr8.3:38678208-38678227 None:intergenic 55.0%
TCCAAGTAGTCATCCCCCGT+AGG - chr8.3:38679677-38679696 None:intergenic 55.0%
TCCTACGGGGGATGACTACT+TGG + chr8.3:38679673-38679692 MS.gene038613:CDS 55.0%
TTATCCACAGGGTCGGGAGA+AGG - chr8.3:38679183-38679202 None:intergenic 55.0%
TTTGCAGGGTAGGGAGAAGG+TGG - chr8.3:38678934-38678953 None:intergenic 55.0%
! AGTGCAGCTGGCTCAGCAAA+TGG - chr8.3:38678709-38678728 None:intergenic 55.0%
! CTCGTGGGGATCGTACTGAT+TGG + chr8.3:38677844-38677863 MS.gene038613:CDS 55.0%
! GAGTGCTGCGGAACCTAAGT+TGG + chr8.3:38679739-38679758 MS.gene038613:CDS 55.0%
!! CATACTGGAAAGGCACCTCG+TGG + chr8.3:38677828-38677847 MS.gene038613:CDS 55.0%
!! GATGTTCTGGCAGAGTGCTG+CGG + chr8.3:38679727-38679746 MS.gene038613:CDS 55.0%
!! TACTGGAAAGGCACCTCGTG+GGG + chr8.3:38677830-38677849 MS.gene038613:CDS 55.0%
GAAGGTCCTGGTCCCAGGAA+TGG + chr8.3:38678625-38678644 MS.gene038613:CDS 60.0%
TACGCACCTTGGGATCTCCC+AGG + chr8.3:38677531-38677550 MS.gene038613:CDS 60.0%
TGTGCACCATTCCTGGGACC+AGG - chr8.3:38678634-38678653 None:intergenic 60.0%
TTTGCAGGGTCGGGAGAAGG+CGG - chr8.3:38678892-38678911 None:intergenic 60.0%
GGTGCCTTCTCCCGACCCTG+TGG + chr8.3:38679176-38679195 MS.gene038613:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 38677480 38679772 38677480 ID=MS.gene038613
chr8.3 mRNA 38677480 38679772 38677480 ID=MS.gene038613.t1;Parent=MS.gene038613
chr8.3 exon 38677480 38677552 38677480 ID=MS.gene038613.t1.exon1;Parent=MS.gene038613.t1
chr8.3 CDS 38677480 38677552 38677480 ID=cds.MS.gene038613.t1;Parent=MS.gene038613.t1
chr8.3 exon 38677646 38677923 38677646 ID=MS.gene038613.t1.exon2;Parent=MS.gene038613.t1
chr8.3 CDS 38677646 38677923 38677646 ID=cds.MS.gene038613.t1;Parent=MS.gene038613.t1
chr8.3 exon 38678592 38679320 38678592 ID=MS.gene038613.t1.exon3;Parent=MS.gene038613.t1
chr8.3 CDS 38678592 38679320 38678592 ID=cds.MS.gene038613.t1;Parent=MS.gene038613.t1
chr8.3 exon 38679563 38679772 38679563 ID=MS.gene038613.t1.exon4;Parent=MS.gene038613.t1
chr8.3 CDS 38679563 38679772 38679563 ID=cds.MS.gene038613.t1;Parent=MS.gene038613.t1
Gene Sequence

>MS.gene038613

ATGGGGAAAAAGTTTCATAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGGTAGTTAATTAATTTCACAAATTTCATATCATAGATTAATTTCTAAATGTGCTGTTAATAATTAAGTTTTGTTTTTTTTGTTTGTTTTTTCAGATTTATCTTATCTCCAAAACGGTGATTTGGAGTGGTATTTCTTCTGTCCGATAGGGAAGAAGTATGGAAGTGGGTCGAGGATGAATCGATCTACGGAAACAGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACAGAATAATCAAATTGTGGGGATGATTAAAACCCTGATATTTCATACTGGAAAGGCACCTCGTGGGGATCGTACTGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGATTTGACTGATAGAGGAATTGTTCAGGTATTTGTTCATTTGTTATTTGTATTGTTAGAATAGAATTACTATGAGCTTTATTAGGGAGATAAATAAGTTAGCATTTTGATATGTGGTAGTTTTGAAGTTGTGCCTTTGATTGTGGATGCACATAAAGATATATTGTACTCTTAGTGTTGATGCTATTGGCATCTATTTTTTTCAATGTAGACTGTAGTAGATAATATAATACATTAATCTGTTTTTGATTCATAGATATATTACATTGGCTTTTATGTCTCCACCTACTATGTCACTAATGGCATTGACCTCCTCTAAATGTGGGGGTTGCATTTTAAAGTTTGAAGTGTGGAGTTCTCATTGACTGCAGTTTAGTTCATGATAATTTTGCATGCACATGTATAGGAGAATCCTTGAAATAGAAATATGTTATTTCATTGGATTAGTTCAAATCAACGAATTGTTGATCCTCCTTACCTTATGAAGTGCCTATTTTACTTTTGTTGAATCCTTGAAATAGAATCATGTTAATTTATGTTTTGATTGACACCCAAAATGAGATTTGCTGTTTTTACATGATGAAGTTGGTACGCCTTCTTGCATATTTTAATCATTTAATTGGTAATTTTTCCGTCCTGTTTTCATTGTGAATACATTTTTAACAAGCTCTTTTGGTTTGTCTTTTTAAATCACAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAAACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCATTTGCTGAGCCAGCTGCACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCATGTCAATCAGGATTGATGCCTTCTCCCGATCCAGCAAATTCATGTCAAACAGGATTACAAACAGGATTACCGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGAGTTCCACCTTCTCCCTACCCTGCAAATTCATGTCAAATAGGATTGACGCCTTCTGTAGACCCTGTGAATTCATGTCAAACAGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGATCCTGCAAATGAATGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACGTCAAACAGGATTGGAGCTGACTGGCCCTGCAAATTCATGTAAAACAAGATTGGTGCCTTCTCCCGACCCTGTGGATAATCCATATCATCAAGCTGTTAATAATGATGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACATTTTATCAATGCTTGATATGTTCGACGATGACATATTGCCTGAGGTATGCTTATCTGTTTCTTCAACCTTCTTGTGTTTTTTTGTTTTCTTGGAAACAGTATGATGTTTCTTTTTTATGTATGGTTTTTGTGTTTTCTACTCTTGTAGGCTTCGTGTTTTAGCTATCCCCTGCAGTTTGCATTGTCTCCTCATAATGTTAATGCCATTTTACTAAATGATTGTGATATATATAGCGACTCTTGATTTCTTTAAGGTTAACTGAATACTGACATTATTTTTGGCCAGGAAAACAATGCTGAAGGTGCACTATCAACTGACTTTTTTGATGGTTTGGGAGACCTGGATTGCTTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATATGGAATGGCTCCTACGGGGGATGACTACTTGGATTTCATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTGCTGCGGAACCTAAGTTGGACCCAAAATAA
Protein sequence

>MS.gene038613.t1

MGKKFHNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIGKKYGSGSRMNRSTETGFWKATGKDRAVQQNNQIVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDRGIVQDSYVICKVFQKEGPGPRNGAQYGKPFNEEDWSDDEVGIPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGSISMPCQSGLMPSPDPANSCQTGLQTGLPPSPDPANSCQTGVPPSPYPANSCQIGLTPSVDPVNSCQTGFMPSPDPSNSCQTGYMPSPDPANECQIGFMSPDPANSRQTGLELTGPANSCKTRLVPSPDPVDNPYHQAVNNDDPVDNSYHQAVNNDDILSMLDMFDDDILPEENNAEGALSTDFFDGLGDLDCLGPVGQNADFSTYGMAPTGDDYLDFMELIDLDSEMFWQSAAEPKLDPK