Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038620.t1 | XP_003628698.1 | 92.1 | 277 | 22 | 0 | 1 | 277 | 1 | 277 | 1.30E-124 | 456.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038620.t1 | Q9FNN6 | 55.7 | 201 | 75 | 3 | 1 | 190 | 3 | 200 | 3.4e-52 | 207.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038620.t1 | G7I733 | 92.1 | 277 | 22 | 0 | 1 | 277 | 1 | 277 | 9.5e-125 | 456.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene038620.t1 | TF | MYB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038620.t1 | MTR_8g063600 | 95.307 | 277 | 13 | 0 | 1 | 277 | 1 | 277 | 0.0 | 545 |
MS.gene038620.t1 | MTR_8g063870 | 60.764 | 288 | 74 | 7 | 1 | 277 | 1 | 260 | 1.64e-104 | 310 |
MS.gene038620.t1 | MTR_4g111975 | 45.583 | 283 | 97 | 11 | 10 | 249 | 8 | 276 | 2.57e-63 | 205 |
MS.gene038620.t1 | MTR_1g111830 | 54.444 | 180 | 76 | 3 | 8 | 183 | 22 | 199 | 4.36e-52 | 174 |
MS.gene038620.t1 | MTR_1g033620 | 60.510 | 157 | 50 | 3 | 121 | 276 | 20 | 165 | 8.36e-52 | 174 |
MS.gene038620.t1 | MTR_5g081860 | 49.180 | 183 | 91 | 1 | 3 | 183 | 20 | 202 | 1.96e-51 | 174 |
MS.gene038620.t1 | MTR_3g462790 | 47.872 | 188 | 88 | 3 | 2 | 181 | 35 | 220 | 4.08e-50 | 172 |
MS.gene038620.t1 | MTR_5g069710 | 43.961 | 207 | 104 | 4 | 3 | 202 | 22 | 223 | 5.05e-49 | 168 |
MS.gene038620.t1 | MTR_7g067080 | 47.027 | 185 | 87 | 2 | 8 | 183 | 33 | 215 | 2.87e-47 | 164 |
MS.gene038620.t1 | MTR_1g033600 | 56.250 | 128 | 42 | 1 | 1 | 114 | 3 | 130 | 1.71e-40 | 140 |
MS.gene038620.t1 | MTR_5g075760 | 39.560 | 182 | 90 | 8 | 5 | 178 | 8 | 177 | 3.88e-25 | 102 |
MS.gene038620.t1 | MTR_5g088010 | 57.500 | 80 | 33 | 1 | 102 | 180 | 56 | 135 | 1.11e-24 | 102 |
MS.gene038620.t1 | MTR_6g092540 | 56.311 | 103 | 36 | 3 | 100 | 202 | 91 | 184 | 1.62e-24 | 102 |
MS.gene038620.t1 | MTR_5g075790 | 37.288 | 177 | 100 | 6 | 5 | 178 | 17 | 185 | 2.90e-24 | 100 |
MS.gene038620.t1 | MTR_4g100630 | 60.256 | 78 | 29 | 1 | 95 | 172 | 84 | 159 | 9.67e-24 | 101 |
MS.gene038620.t1 | MTR_2g100930 | 62.195 | 82 | 25 | 2 | 95 | 172 | 94 | 173 | 2.79e-23 | 100 |
MS.gene038620.t1 | MTR_8g101650 | 63.014 | 73 | 24 | 1 | 100 | 172 | 99 | 168 | 1.19e-22 | 97.1 |
MS.gene038620.t1 | MTR_5g027570 | 43.363 | 113 | 54 | 1 | 102 | 214 | 88 | 190 | 3.07e-22 | 94.7 |
MS.gene038620.t1 | MTR_5g088060 | 60.759 | 79 | 29 | 2 | 103 | 180 | 270 | 347 | 3.07e-22 | 98.6 |
MS.gene038620.t1 | MTR_5g488160 | 60.759 | 79 | 29 | 2 | 103 | 180 | 270 | 347 | 3.07e-22 | 98.6 |
MS.gene038620.t1 | MTR_1g022290 | 56.522 | 69 | 30 | 0 | 4 | 72 | 1 | 69 | 9.14e-21 | 86.7 |
MS.gene038620.t1 | MTR_5g037080 | 70.175 | 57 | 17 | 0 | 95 | 151 | 91 | 147 | 3.35e-19 | 87.8 |
MS.gene038620.t1 | MTR_3g116720 | 52.308 | 65 | 31 | 0 | 10 | 74 | 16 | 80 | 5.89e-19 | 81.3 |
MS.gene038620.t1 | MTR_3g111880 | 53.623 | 69 | 32 | 0 | 4 | 72 | 1 | 69 | 6.93e-19 | 81.3 |
MS.gene038620.t1 | MTR_4g107230 | 71.154 | 52 | 15 | 0 | 100 | 151 | 78 | 129 | 9.60e-19 | 86.3 |
MS.gene038620.t1 | MTR_5g027550 | 42.735 | 117 | 57 | 3 | 102 | 217 | 73 | 180 | 3.18e-18 | 83.6 |
MS.gene038620.t1 | MTR_3g104370 | 50.000 | 84 | 41 | 1 | 96 | 178 | 81 | 164 | 1.06e-17 | 82.0 |
MS.gene038620.t1 | MTR_7g089210 | 52.174 | 69 | 33 | 0 | 14 | 82 | 16 | 84 | 6.88e-17 | 75.9 |
MS.gene038620.t1 | MTR_0036s0260 | 54.412 | 68 | 29 | 1 | 106 | 173 | 28 | 93 | 1.18e-16 | 78.6 |
MS.gene038620.t1 | MTR_5g020170 | 53.731 | 67 | 31 | 0 | 6 | 72 | 15 | 81 | 2.05e-16 | 74.7 |
MS.gene038620.t1 | MTR_4g015130 | 60.000 | 60 | 22 | 1 | 116 | 175 | 3 | 60 | 4.70e-16 | 73.2 |
MS.gene038620.t1 | MTR_6g004250 | 50.000 | 72 | 36 | 0 | 1 | 72 | 1 | 72 | 1.56e-15 | 71.6 |
MS.gene038620.t1 | MTR_2g090305 | 54.412 | 68 | 29 | 1 | 106 | 173 | 28 | 93 | 2.13e-15 | 74.3 |
MS.gene038620.t1 | MTR_3g013440 | 49.315 | 73 | 36 | 1 | 1 | 72 | 1 | 73 | 6.95e-15 | 70.1 |
MS.gene038620.t1 | MTR_1g048660 | 45.455 | 77 | 38 | 2 | 107 | 182 | 13 | 86 | 3.23e-13 | 65.5 |
MS.gene038620.t1 | MTR_3g070110 | 37.681 | 138 | 76 | 4 | 44 | 173 | 32 | 167 | 9.60e-13 | 67.4 |
MS.gene038620.t1 | MTR_8g077360 | 38.356 | 73 | 44 | 1 | 7 | 79 | 2 | 73 | 1.82e-12 | 62.8 |
MS.gene038620.t1 | MTR_8g077380 | 38.889 | 72 | 43 | 1 | 7 | 78 | 2 | 72 | 2.55e-12 | 62.4 |
MS.gene038620.t1 | MTR_8g077390 | 38.889 | 72 | 43 | 1 | 7 | 78 | 2 | 72 | 2.55e-12 | 62.4 |
MS.gene038620.t1 | MTR_3g111920 | 45.312 | 64 | 33 | 2 | 10 | 72 | 3 | 65 | 2.62e-12 | 62.8 |
MS.gene038620.t1 | MTR_1g083180 | 45.679 | 81 | 42 | 2 | 108 | 187 | 63 | 142 | 9.66e-12 | 63.9 |
MS.gene038620.t1 | MTR_8g077420 | 43.284 | 67 | 35 | 2 | 4 | 70 | 1 | 64 | 1.17e-11 | 60.5 |
MS.gene038620.t1 | MTR_5g020540 | 47.541 | 61 | 31 | 1 | 10 | 70 | 4 | 63 | 1.51e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038620.t1 | AT5G08520 | 51.361 | 294 | 114 | 7 | 1 | 277 | 3 | 284 | 4.43e-85 | 261 |
MS.gene038620.t1 | AT5G23650 | 38.554 | 332 | 146 | 6 | 3 | 278 | 6 | 335 | 3.75e-59 | 196 |
MS.gene038620.t1 | AT1G49010 | 41.489 | 282 | 115 | 9 | 10 | 254 | 8 | 276 | 6.97e-50 | 171 |
MS.gene038620.t1 | AT5G04760 | 52.941 | 170 | 75 | 3 | 6 | 175 | 2 | 166 | 1.97e-49 | 166 |
MS.gene038620.t1 | AT2G38090 | 47.568 | 185 | 79 | 3 | 8 | 176 | 27 | 209 | 3.00e-49 | 169 |
MS.gene038620.t1 | AT5G58900 | 46.995 | 183 | 84 | 2 | 5 | 176 | 29 | 209 | 3.59e-48 | 166 |
MS.gene038620.t1 | AT5G05790 | 47.568 | 185 | 85 | 5 | 7 | 183 | 28 | 208 | 1.51e-45 | 158 |
MS.gene038620.t1 | AT5G05790 | 47.568 | 185 | 85 | 5 | 7 | 183 | 28 | 208 | 1.51e-45 | 158 |
MS.gene038620.t1 | AT3G11280 | 50.610 | 164 | 77 | 2 | 10 | 173 | 33 | 192 | 4.23e-45 | 157 |
MS.gene038620.t1 | AT3G11280 | 50.610 | 164 | 77 | 2 | 10 | 173 | 33 | 192 | 4.23e-45 | 157 |
MS.gene038620.t1 | AT5G01200 | 44.086 | 186 | 82 | 5 | 10 | 175 | 30 | 213 | 4.15e-40 | 144 |
MS.gene038620.t1 | AT3G10580 | 43.169 | 183 | 73 | 6 | 10 | 183 | 8 | 168 | 7.90e-36 | 132 |
MS.gene038620.t1 | AT3G10580 | 43.169 | 183 | 73 | 6 | 10 | 183 | 8 | 168 | 1.54e-35 | 132 |
MS.gene038620.t1 | AT4G09450 | 42.690 | 171 | 84 | 3 | 4 | 174 | 1 | 157 | 9.43e-33 | 122 |
MS.gene038620.t1 | AT5G47390 | 57.732 | 97 | 39 | 1 | 84 | 180 | 74 | 168 | 6.67e-26 | 107 |
MS.gene038620.t1 | AT5G56840 | 59.740 | 77 | 30 | 1 | 101 | 177 | 86 | 161 | 1.89e-21 | 92.8 |
MS.gene038620.t1 | AT3G10590 | 35.829 | 187 | 93 | 8 | 4 | 174 | 1 | 176 | 6.18e-21 | 90.5 |
MS.gene038620.t1 | AT5G61620 | 44.860 | 107 | 47 | 2 | 93 | 189 | 95 | 199 | 1.15e-19 | 89.4 |
MS.gene038620.t1 | AT1G75250 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 2.12e-19 | 84.0 |
MS.gene038620.t1 | AT1G70000 | 70.175 | 57 | 17 | 0 | 95 | 151 | 87 | 143 | 2.14e-19 | 87.4 |
MS.gene038620.t1 | AT1G70000 | 70.175 | 57 | 17 | 0 | 95 | 151 | 87 | 143 | 2.14e-19 | 87.4 |
MS.gene038620.t1 | AT1G75250 | 51.429 | 70 | 34 | 0 | 10 | 79 | 12 | 81 | 3.84e-19 | 82.4 |
MS.gene038620.t1 | AT3G16350 | 61.429 | 70 | 19 | 1 | 84 | 153 | 123 | 184 | 4.56e-19 | 88.6 |
MS.gene038620.t1 | AT4G39250 | 47.368 | 76 | 40 | 0 | 10 | 85 | 14 | 89 | 7.83e-19 | 81.6 |
MS.gene038620.t1 | AT1G74840 | 70.588 | 51 | 15 | 0 | 101 | 151 | 91 | 141 | 2.56e-17 | 81.3 |
MS.gene038620.t1 | AT1G74840 | 70.588 | 51 | 15 | 0 | 101 | 151 | 91 | 141 | 3.45e-17 | 81.3 |
MS.gene038620.t1 | AT1G19000 | 66.071 | 56 | 19 | 0 | 96 | 151 | 92 | 147 | 5.58e-17 | 81.3 |
MS.gene038620.t1 | AT1G19000 | 66.071 | 56 | 19 | 0 | 96 | 151 | 92 | 147 | 5.58e-17 | 81.3 |
MS.gene038620.t1 | AT2G21650 | 50.000 | 72 | 36 | 0 | 10 | 81 | 14 | 85 | 1.83e-16 | 75.1 |
MS.gene038620.t1 | AT2G18328 | 55.932 | 59 | 26 | 0 | 14 | 72 | 15 | 73 | 2.98e-15 | 70.9 |
MS.gene038620.t1 | AT1G19510 | 46.377 | 69 | 37 | 0 | 14 | 82 | 16 | 84 | 6.94e-15 | 70.5 |
Find 121 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTTGCTTGACCGGTAAT+TGG | 0.261142 | 8.3:-38755382 | None:intergenic |
GAGAAGAAGGGTTGGATATC+TGG | 0.301615 | 8.3:+38756993 | MS.gene038620:CDS |
TCACAGAACAATGGATGAAA+TGG | 0.332083 | 8.3:+38752616 | None:intergenic |
GATATCAACCACATTGAATC+TGG | 0.342793 | 8.3:+38752797 | MS.gene038620:CDS |
ATGGATAGATATCAATTTGC+AGG | 0.357583 | 8.3:+38756758 | MS.gene038620:CDS |
TGTACTTTGGGGAGAGAAGA+AGG | 0.380107 | 8.3:+38756980 | MS.gene038620:CDS |
TAGGTTGAGTTCTATCCATC+TGG | 0.385170 | 8.3:+38756593 | MS.gene038620:intron |
ATTAAAGAAGGTATTATATC+CGG | 0.387918 | 8.3:+38756948 | MS.gene038620:CDS |
TTTAATTGCAGAAGAAGAAT+AGG | 0.395684 | 8.3:-38756931 | None:intergenic |
GGCATAACTGTCTCAGAAAC+TGG | 0.395799 | 8.3:-38755613 | None:intergenic |
CACCCCATCCATGGTTCTCC+AGG | 0.402855 | 8.3:-38755183 | None:intergenic |
GGAGACATGGATTATGGTCT+TGG | 0.404056 | 8.3:+38755589 | MS.gene038620:CDS |
GCTCCCGGAGACATGGATTA+TGG | 0.405160 | 8.3:+38755583 | MS.gene038620:CDS |
CCATCGATCCACAGCGTCCT+CGG | 0.411794 | 8.3:-38752702 | None:intergenic |
GTCCGATTGTGATGGCTGTT+CGG | 0.413997 | 8.3:+38756679 | MS.gene038620:CDS |
GCTGGAATACACGCTGCTCC+TGG | 0.421919 | 8.3:+38755499 | MS.gene038620:CDS |
TTGAACAGGCTATTTCTTCA+AGG | 0.422344 | 8.3:+38755160 | MS.gene038620:intron |
AGCAGAATTGCTTGCTTGAC+CGG | 0.425370 | 8.3:-38755389 | None:intergenic |
TTGATTCCAGCAGGTGGGAC+TGG | 0.426711 | 8.3:-38755448 | None:intergenic |
CGGGTGTAGAGGTGTACTTT+GGG | 0.428229 | 8.3:+38756968 | MS.gene038620:CDS |
GATACAACTGGTCCTCCTAT+AGG | 0.431345 | 8.3:-38755532 | None:intergenic |
TACACGCTGCTCCTGGGATC+GGG | 0.437370 | 8.3:+38755506 | MS.gene038620:CDS |
CCTGGGATCGGGCAACCTAT+AGG | 0.438438 | 8.3:+38755517 | MS.gene038620:CDS |
TGTATTCCAGCAGGTGGGGC+TGG | 0.439045 | 8.3:-38755487 | None:intergenic |
TCTTCTTCTGCAATTAAAGA+AGG | 0.444463 | 8.3:+38756936 | MS.gene038620:CDS |
GTCATAGGACCCAGGTTCAT+TGG | 0.445696 | 8.3:-38755643 | None:intergenic |
GCACCTCAAGGACCAATTAC+CGG | 0.448210 | 8.3:+38755370 | MS.gene038620:CDS |
AATTCTGCTGCAAGTTCTGC+TGG | 0.448212 | 8.3:+38755403 | MS.gene038620:CDS |
AATCCTCCAGCCCCACCTGC+TGG | 0.449144 | 8.3:+38755481 | MS.gene038620:CDS |
CCGGGTGTAGAGGTGTACTT+TGG | 0.450968 | 8.3:+38756967 | MS.gene038620:CDS |
CAGGCTATTTCTTCAAGGCC+TGG | 0.460201 | 8.3:+38755165 | MS.gene038620:intron |
GCTCCTCCAGTCCCACCTGC+TGG | 0.465316 | 8.3:+38755442 | MS.gene038620:CDS |
CCCAGGTTCATTGGTACCCC+TGG | 0.466627 | 8.3:-38755634 | None:intergenic |
TGGGACTGGAGGAGCTTGTT+CGG | 0.472434 | 8.3:-38755434 | None:intergenic |
GTGAAGGAGGAGCTGTGAAA+AGG | 0.473544 | 8.3:+38752876 | MS.gene038620:CDS |
CCTCCGCCTGGTATCGAGTA+CGG | 0.474011 | 8.3:+38756440 | MS.gene038620:CDS |
CACAGAACAATGGATGAAAT+GGG | 0.481775 | 8.3:+38752617 | None:intergenic |
TGAAGGAGGAGCTGTGAAAA+GGG | 0.482163 | 8.3:+38752877 | MS.gene038620:CDS |
AGAACCATGGATGGGGTGAC+TGG | 0.483144 | 8.3:+38755188 | MS.gene038620:CDS |
CTGGAATACACGCTGCTCCT+GGG | 0.493957 | 8.3:+38755500 | MS.gene038620:CDS |
TTCTTATCAAGAACGGCGAA+AGG | 0.494765 | 8.3:+38752916 | MS.gene038620:CDS |
AACGGCGAAAGGGTGTTCCT+TGG | 0.495446 | 8.3:+38752927 | MS.gene038620:CDS |
ATACACGCTGCTCCTGGGAT+CGG | 0.497217 | 8.3:+38755505 | MS.gene038620:CDS |
AGCCGAACAGCCATCACAAT+CGG | 0.497370 | 8.3:-38756681 | None:intergenic |
GCCAGGGGTACCAATGAACC+TGG | 0.500745 | 8.3:+38755633 | MS.gene038620:CDS |
GTACTTTGGGGAGAGAAGAA+GGG | 0.502006 | 8.3:+38756981 | MS.gene038620:CDS |
CATCGATCCACAGCGTCCTC+GGG | 0.504680 | 8.3:-38752701 | None:intergenic |
GCAGTGTTCAGTCCAGCCAC+TGG | 0.507185 | 8.3:+38756706 | MS.gene038620:CDS |
TTGCTGCAGATTTGCAGCAA+TGG | 0.510335 | 8.3:+38756739 | MS.gene038620:CDS |
AGCTGTGAAAAGGGGAGCTA+AGG | 0.515551 | 8.3:+38752886 | MS.gene038620:CDS |
ATTTGTGATATTCCTCCGCC+TGG | 0.516770 | 8.3:+38756428 | MS.gene038620:CDS |
GTACCAACTGCAGATACAAC+TGG | 0.516981 | 8.3:-38755544 | None:intergenic |
CCTATAGGTTGCCCGATCCC+AGG | 0.518381 | 8.3:-38755517 | None:intergenic |
TCAGAAATACAAAATTCGTC+AGG | 0.519592 | 8.3:+38755270 | MS.gene038620:CDS |
AAAGGTAACATCATGTATGC+TGG | 0.520807 | 8.3:-38755326 | None:intergenic |
AAAATCGCGGCTGATGTACC+CGG | 0.524444 | 8.3:+38752728 | MS.gene038620:CDS |
CAAAGCATTTGAAAATGCAT+TGG | 0.524922 | 8.3:+38752670 | MS.gene038620:CDS |
TGAAAGAGAAGAAAGAAAGA+AGG | 0.525485 | 8.3:+38755299 | MS.gene038620:CDS |
CCGGGAGCAGTAAAATTCAC+TGG | 0.526088 | 8.3:-38755568 | None:intergenic |
ATTCCAGCAGGTGGGGCTGG+AGG | 0.527139 | 8.3:-38755484 | None:intergenic |
CCGAGGACGCTGTGGATCGA+TGG | 0.531444 | 8.3:+38752702 | MS.gene038620:CDS |
CTCCGCCTGGTATCGAGTAC+GGG | 0.531779 | 8.3:+38756441 | MS.gene038620:CDS |
AGCGTGTATTCCAGCAGGTG+GGG | 0.532991 | 8.3:-38755491 | None:intergenic |
GCATGGCTTGCTACTTGTGT+AGG | 0.536057 | 8.3:-38755247 | None:intergenic |
AAGACCATAATCCATGTCTC+CGG | 0.538089 | 8.3:-38755587 | None:intergenic |
TTTGGGGAGAGAAGAAGGGT+TGG | 0.539811 | 8.3:+38756985 | MS.gene038620:CDS |
CGCAGAGCACTGCTCCCAGA+TGG | 0.540698 | 8.3:-38756608 | None:intergenic |
CAGCGTGTATTCCAGCAGGT+GGG | 0.540781 | 8.3:-38755492 | None:intergenic |
GGAGCAGCGTGTATTCCAGC+AGG | 0.541289 | 8.3:-38755496 | None:intergenic |
CTATGTTCATCTTCCGTCCA+AGG | 0.545058 | 8.3:-38752944 | None:intergenic |
GTTTCTGAGACAGTTATGCC+AGG | 0.548613 | 8.3:+38755616 | MS.gene038620:CDS |
GCAGCGTGTATTCCAGCAGG+TGG | 0.551793 | 8.3:-38755493 | None:intergenic |
AAGAGTTCAACAAAGCGTAC+TGG | 0.557383 | 8.3:+38752854 | MS.gene038620:CDS |
TCCTGCCCGTACTCGATACC+AGG | 0.557579 | 8.3:-38756446 | None:intergenic |
AAGGCCTGGAGAACCATGGA+TGG | 0.559427 | 8.3:+38755179 | MS.gene038620:CDS |
AAAGAACATATCCCAGTGGC+TGG | 0.560047 | 8.3:-38756718 | None:intergenic |
AGACCATAATCCATGTCTCC+GGG | 0.563041 | 8.3:-38755586 | None:intergenic |
TCAACAAAGCGTACTGGTGA+AGG | 0.564550 | 8.3:+38752860 | MS.gene038620:CDS |
TTAAAGAAGGTATTATATCC+GGG | 0.564718 | 8.3:+38756949 | MS.gene038620:CDS |
CGAGGACGCTGTGGATCGAT+GGG | 0.568594 | 8.3:+38752703 | MS.gene038620:CDS |
CCAAAGTACACCTCTACACC+CGG | 0.568736 | 8.3:-38756967 | None:intergenic |
CTTGGACGGAAGATGAACAT+AGG | 0.569094 | 8.3:+38752945 | MS.gene038620:CDS |
GCCTGGTATCGAGTACGGGC+AGG | 0.571959 | 8.3:+38756445 | MS.gene038620:CDS |
TTCGCCAGTCACCCCATCCA+TGG | 0.577904 | 8.3:-38755192 | None:intergenic |
ATTCCAGCAGGTGGGACTGG+AGG | 0.578008 | 8.3:-38755445 | None:intergenic |
GCGAAAGGGTGTTCCTTGGA+CGG | 0.581376 | 8.3:+38752931 | MS.gene038620:CDS |
AGGCCTGGAGAACCATGGAT+GGG | 0.582995 | 8.3:+38755180 | MS.gene038620:CDS |
CAGTGTTCAGTCCAGCCACT+GGG | 0.584817 | 8.3:+38756707 | MS.gene038620:CDS |
TCTTATCAAGAACGGCGAAA+GGG | 0.585934 | 8.3:+38752917 | MS.gene038620:CDS |
AAAGAATCATAATCTGGCAG+AGG | 0.587497 | 8.3:-38752827 | None:intergenic |
CTTCGAGTTCTTATCAAGAA+CGG | 0.593298 | 8.3:+38752909 | MS.gene038620:CDS |
TTTCTGAGACAGTTATGCCA+GGG | 0.595865 | 8.3:+38755617 | MS.gene038620:CDS |
GGACCAGTTGTATCTGCAGT+TGG | 0.597989 | 8.3:+38755541 | MS.gene038620:CDS |
AGAGATTAAGCGTCACTATG+TGG | 0.598823 | 8.3:+38752763 | MS.gene038620:CDS |
CTTCAAGGCCTGGAGAACCA+TGG | 0.600275 | 8.3:+38755175 | MS.gene038620:CDS |
GGCAGGATATATGCTTTGAG+TGG | 0.601382 | 8.3:+38756462 | MS.gene038620:CDS |
GGTATTATATCCGGGTGTAG+AGG | 0.601632 | 8.3:+38756957 | MS.gene038620:CDS |
GTGACTGGCGAAGTATATCA+AGG | 0.602104 | 8.3:+38755203 | MS.gene038620:CDS |
AGGTTGAGTTCTATCCATCT+GGG | 0.617444 | 8.3:+38756594 | MS.gene038620:intron |
GGCCTGGAGAACCATGGATG+GGG | 0.620882 | 8.3:+38755181 | MS.gene038620:CDS |
TGGATAGATATCAATTTGCA+GGG | 0.622492 | 8.3:+38756759 | MS.gene038620:CDS |
AAATCGCGGCTGATGTACCC+GGG | 0.624584 | 8.3:+38752729 | MS.gene038620:CDS |
AAATGGGTAGCAGCTGTGAG+TGG | 0.631015 | 8.3:+38752633 | MS.gene038620:CDS |
GGGATCGGGCAACCTATAGG+AGG | 0.633934 | 8.3:+38755520 | MS.gene038620:CDS |
CCGTACTCGATACCAGGCGG+AGG | 0.636075 | 8.3:-38756440 | None:intergenic |
GCATGACTGTCCGATTGTGA+TGG | 0.641888 | 8.3:+38756671 | MS.gene038620:CDS |
GGAGACATTTCAGCACCTCA+AGG | 0.642144 | 8.3:+38755358 | MS.gene038620:CDS |
ACAAAGCGTACTGGTGAAGG+AGG | 0.643312 | 8.3:+38752863 | MS.gene038620:CDS |
GAAGGAGGAGCTGTGAAAAG+GGG | 0.644294 | 8.3:+38752878 | MS.gene038620:CDS |
GGGTGTAGAGGTGTACTTTG+GGG | 0.652520 | 8.3:+38756969 | MS.gene038620:CDS |
TTCTGAGACAGTTATGCCAG+GGG | 0.654155 | 8.3:+38755618 | MS.gene038620:CDS |
GAATTATCCCGAGGACGCTG+TGG | 0.679154 | 8.3:+38752694 | MS.gene038620:CDS |
CCAGGGGTACCAATGAACCT+GGG | 0.686028 | 8.3:+38755634 | MS.gene038620:CDS |
TGCATTGGCGAATTATCCCG+AGG | 0.693717 | 8.3:+38752685 | MS.gene038620:CDS |
ATAGATATCAATTTGCAGGG+AGG | 0.694470 | 8.3:+38756762 | MS.gene038620:CDS |
TGACCGGTAATTGGTCCTTG+AGG | 0.703451 | 8.3:-38755373 | None:intergenic |
GGATCGATGGGAGAAAATCG+CGG | 0.708384 | 8.3:+38752715 | MS.gene038620:CDS |
AAGTATATCAAGGTACTGTG+TGG | 0.715361 | 8.3:+38755213 | MS.gene038620:CDS |
GCACAAAACCAGATTCAATG+TGG | 0.730016 | 8.3:-38752805 | None:intergenic |
TGCCCGTACTCGATACCAGG+CGG | 0.737723 | 8.3:-38756443 | None:intergenic |
CAGCAAAGAACATATCCCAG+TGG | 0.757875 | 8.3:-38756722 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATTTAAATAAAATAA+AGG | - | chr8.3:38753270-38753289 | None:intergenic | 0.0% |
!! | ACTAAAATCATATTTAAATA+CGG | - | chr8.3:38752980-38752999 | None:intergenic | 10.0% |
!!! | ATCTTGTAAATTTTTTTTAT+TGG | + | chr8.3:38753030-38753049 | MS.gene038620:intron | 10.0% |
!!! | TTAATAATTATAGTGTTTTT+TGG | - | chr8.3:38753222-38753241 | None:intergenic | 10.0% |
!! | AATCTAAACAAAAAAACTTA+GGG | + | chr8.3:38753187-38753206 | MS.gene038620:intron | 15.0% |
!! | TATTTAAATATATACTCTTG+AGG | + | chr8.3:38753276-38753295 | MS.gene038620:intron | 15.0% |
!!! | TATAAAAACTTTTCTAACAT+GGG | + | chr8.3:38754796-38754815 | MS.gene038620:intron | 15.0% |
!!! | TTCATTGATGTTTTAATTTT+AGG | - | chr8.3:38754115-38754134 | None:intergenic | 15.0% |
!! | AAAACATCAATGAAAATGTA+TGG | + | chr8.3:38754121-38754140 | MS.gene038620:intron | 20.0% |
!! | AAACATCAATGAAAATGTAT+GGG | + | chr8.3:38754122-38754141 | MS.gene038620:intron | 20.0% |
!! | ACACTATAATTATTAATTGC+AGG | + | chr8.3:38753226-38753245 | MS.gene038620:intron | 20.0% |
!! | ATAAAACTATGGATTTAATG+AGG | + | chr8.3:38753782-38753801 | MS.gene038620:intron | 20.0% |
!! | CACTATAATTATTAATTGCA+GGG | + | chr8.3:38753227-38753246 | MS.gene038620:intron | 20.0% |
!! | GAATCTAAACAAAAAAACTT+AGG | + | chr8.3:38753186-38753205 | MS.gene038620:intron | 20.0% |
!! | GAATGAAGTAAATAAAACTA+TGG | + | chr8.3:38753771-38753790 | MS.gene038620:intron | 20.0% |
!! | GACGATAAATAACAAAAATA+TGG | - | chr8.3:38756161-38756180 | None:intergenic | 20.0% |
!! | GATATGAATGATTAAAATGA+TGG | + | chr8.3:38753427-38753446 | MS.gene038620:intron | 20.0% |
!! | TTGGTAAATACTGATAAATA+AGG | + | chr8.3:38754838-38754857 | MS.gene038620:intron | 20.0% |
!! | TTTGAAAAAGAATCATAATC+TGG | - | chr8.3:38752836-38752855 | None:intergenic | 20.0% |
!!! | AGTATGGCTTTAAATTTTTA+AGG | + | chr8.3:38755978-38755997 | MS.gene038620:intron | 20.0% |
!!! | ATGTTTAGAGCATAAAAATA+TGG | - | chr8.3:38756324-38756343 | None:intergenic | 20.0% |
!!! | ATTAAAGAAGGTATTATATC+CGG | + | chr8.3:38756948-38756967 | MS.gene038620:CDS | 20.0% |
!!! | GTAAGTTCTAATAAATACAT+TGG | - | chr8.3:38753917-38753936 | None:intergenic | 20.0% |
!!! | GTATAAAAACTTTTCTAACA+TGG | + | chr8.3:38754795-38754814 | MS.gene038620:intron | 20.0% |
!!! | TATTTACTTGATTTGGTAAA+AGG | - | chr8.3:38756183-38756202 | None:intergenic | 20.0% |
!!! | TTTTAGGATGTTTTAATTCT+AGG | - | chr8.3:38754099-38754118 | None:intergenic | 20.0% |
! | AAAACCAAAAAGATCTGATA+GGG | - | chr8.3:38755001-38755020 | None:intergenic | 25.0% |
! | AAAGTTTGAATTAGGAAGTT+TGG | + | chr8.3:38754819-38754838 | MS.gene038620:intron | 25.0% |
! | AACATCAATGAAAATGTATG+GGG | + | chr8.3:38754123-38754142 | MS.gene038620:intron | 25.0% |
! | AATAACAAAAATATGGTGCT+TGG | - | chr8.3:38756154-38756173 | None:intergenic | 25.0% |
! | AATTGCAGACATTAGTTATA+TGG | + | chr8.3:38755061-38755080 | MS.gene038620:intron | 25.0% |
! | AGACTTTGATACATTGATAT+AGG | + | chr8.3:38754310-38754329 | MS.gene038620:intron | 25.0% |
! | GATAAATAAGGACTAGAATT+GGG | + | chr8.3:38754850-38754869 | MS.gene038620:intron | 25.0% |
! | GATGACTCAATAACATATTT+AGG | - | chr8.3:38756302-38756321 | None:intergenic | 25.0% |
! | GATGTTACCTTTGTAAAAAA+TGG | + | chr8.3:38755337-38755356 | MS.gene038620:CDS | 25.0% |
! | GCAAATGTATTTACTTGATT+TGG | - | chr8.3:38756190-38756209 | None:intergenic | 25.0% |
! | TAAAACCAAAAAGATCTGAT+AGG | - | chr8.3:38755002-38755021 | None:intergenic | 25.0% |
! | TAGGATATTGTGTTAGTATT+AGG | - | chr8.3:38754232-38754251 | None:intergenic | 25.0% |
! | TAGTAGGATTAAATAGTGTT+GGG | + | chr8.3:38753964-38753983 | MS.gene038620:intron | 25.0% |
! | TGACAATTCTTATACTTGTA+GGG | + | chr8.3:38756077-38756096 | MS.gene038620:intron | 25.0% |
! | TGATAAATAAGGACTAGAAT+TGG | + | chr8.3:38754849-38754868 | MS.gene038620:intron | 25.0% |
! | TGATGTATATGAAGTTAGTA+TGG | + | chr8.3:38755962-38755981 | MS.gene038620:intron | 25.0% |
! | TGTAATAAATTCTTCTGATG+TGG | + | chr8.3:38753880-38753899 | MS.gene038620:intron | 25.0% |
! | TGTTACTGATAATCATCTAA+TGG | - | chr8.3:38755039-38755058 | None:intergenic | 25.0% |
! | TTGACAATTCTTATACTTGT+AGG | + | chr8.3:38756076-38756095 | MS.gene038620:intron | 25.0% |
! | TTTAATTGCAGAAGAAGAAT+AGG | - | chr8.3:38756934-38756953 | None:intergenic | 25.0% |
! | TTTGCAAAGAAGTCTTTATA+AGG | + | chr8.3:38756205-38756224 | MS.gene038620:intron | 25.0% |
!! | AGATCCGTTGAAAAATTTTA+AGG | - | chr8.3:38753646-38753665 | None:intergenic | 25.0% |
!! | TAAACTCTAAAAGTGAGAAT+TGG | - | chr8.3:38756236-38756255 | None:intergenic | 25.0% |
!! | TTAGTAACTTTTCCAAAGAT+TGG | - | chr8.3:38754411-38754430 | None:intergenic | 25.0% |
!! | TTATGCTCTAAACATTACAA+TGG | + | chr8.3:38756329-38756348 | MS.gene038620:intron | 25.0% |
!! | TTGACTAAATTTAGAGTTAC+TGG | + | chr8.3:38754692-38754711 | MS.gene038620:intron | 25.0% |
!! | TTTTACTAAACCATTGTATC+TGG | + | chr8.3:38753704-38753723 | MS.gene038620:intron | 25.0% |
!! | TTTTTCTATGTATGTACACT+GGG | - | chr8.3:38755718-38755737 | None:intergenic | 25.0% |
!!! | AAACACAGAAGTTTTTTACT+AGG | + | chr8.3:38754890-38754909 | MS.gene038620:intron | 25.0% |
!!! | AATGTCTCCATTTTTTACAA+AGG | - | chr8.3:38755347-38755366 | None:intergenic | 25.0% |
!!! | CAACCATTTTTGAATTTACT+GGG | + | chr8.3:38753160-38753179 | MS.gene038620:intron | 25.0% |
!!! | TAGCATTTATCTAAGGTTTT+AGG | + | chr8.3:38753745-38753764 | MS.gene038620:intron | 25.0% |
!!! | TATTTTCAAGTTTGTTGAAC+AGG | + | chr8.3:38755146-38755165 | MS.gene038620:intron | 25.0% |
!!! | TGTGCCTTAAAATTTTTCAA+CGG | + | chr8.3:38753639-38753658 | MS.gene038620:intron | 25.0% |
!!! | TTAAAGAAGGTATTATATCC+GGG | + | chr8.3:38756949-38756968 | MS.gene038620:CDS | 25.0% |
!!! | TTTTTTCTATGTATGTACAC+TGG | - | chr8.3:38755719-38755738 | None:intergenic | 25.0% |
AAAAAAACGCTATAGTTGCA+AGG | - | chr8.3:38753003-38753022 | None:intergenic | 30.0% | |
AAAAATATGGTGCTTGGATT+AGG | - | chr8.3:38756148-38756167 | None:intergenic | 30.0% | |
AAACATTACAATGGCTGAAT+TGG | + | chr8.3:38756338-38756357 | MS.gene038620:intron | 30.0% | |
AACATGGGAAAGTTTGAATT+AGG | + | chr8.3:38754811-38754830 | MS.gene038620:intron | 30.0% | |
AATATTGACATCCATAGCAT+AGG | + | chr8.3:38755831-38755850 | MS.gene038620:intron | 30.0% | |
AATCATGAAGTGGTTATAAG+AGG | + | chr8.3:38755692-38755711 | MS.gene038620:intron | 30.0% | |
AATGTAGAACAATGTATTGC+TGG | + | chr8.3:38754477-38754496 | MS.gene038620:intron | 30.0% | |
AATGTATCAAAGTCTAAACG+AGG | - | chr8.3:38754305-38754324 | None:intergenic | 30.0% | |
ACAAACCACTAAAATCATCA+AGG | - | chr8.3:38754205-38754224 | None:intergenic | 30.0% | |
ACAATTCTTATACTTGTAGG+GGG | + | chr8.3:38756079-38756098 | MS.gene038620:intron | 30.0% | |
ACTTACTACACTTCTAATGA+CGG | + | chr8.3:38753931-38753950 | MS.gene038620:intron | 30.0% | |
ATAAATACATTGGATCACAG+AGG | - | chr8.3:38753907-38753926 | None:intergenic | 30.0% | |
ATATCAGATCTGTGAAACAA+TGG | + | chr8.3:38754430-38754449 | MS.gene038620:intron | 30.0% | |
ATATCAGTATCGTCAAATAG+CGG | - | chr8.3:38753597-38753616 | None:intergenic | 30.0% | |
ATCTGTGAAACAATGGTATT+AGG | + | chr8.3:38754437-38754456 | MS.gene038620:intron | 30.0% | |
ATGGATAGATATCAATTTGC+AGG | + | chr8.3:38756758-38756777 | MS.gene038620:CDS | 30.0% | |
CAAATGCCAATATCATTTAC+TGG | + | chr8.3:38754532-38754551 | MS.gene038620:intron | 30.0% | |
CTAAACAAAAAAACTTAGGG+AGG | + | chr8.3:38753190-38753209 | MS.gene038620:intron | 30.0% | |
CTAGTAGGATTAAATAGTGT+TGG | + | chr8.3:38753963-38753982 | MS.gene038620:intron | 30.0% | |
GACAATTCTTATACTTGTAG+GGG | + | chr8.3:38756078-38756097 | MS.gene038620:intron | 30.0% | |
TAATTCAAATGCATGCTTCA+CGG | - | chr8.3:38754068-38754087 | None:intergenic | 30.0% | |
TCAGAAATACAAAATTCGTC+AGG | + | chr8.3:38755270-38755289 | MS.gene038620:CDS | 30.0% | |
TCTTCTTCTGCAATTAAAGA+AGG | + | chr8.3:38756936-38756955 | MS.gene038620:CDS | 30.0% | |
TGAAAGAGAAGAAAGAAAGA+AGG | + | chr8.3:38755299-38755318 | MS.gene038620:CDS | 30.0% | |
TGGATAGATATCAATTTGCA+GGG | + | chr8.3:38756759-38756778 | MS.gene038620:CDS | 30.0% | |
TTATTATACTTCGGATCTGA+TGG | + | chr8.3:38756015-38756034 | MS.gene038620:intron | 30.0% | |
! | CAAAGCATTTGAAAATGCAT+TGG | + | chr8.3:38752670-38752689 | MS.gene038620:CDS | 30.0% |
! | CAGAAGAAGAATAGGTTTTA+AGG | - | chr8.3:38756926-38756945 | None:intergenic | 30.0% |
! | CATTTTTGAATTTACTGGGA+CGG | + | chr8.3:38753164-38753183 | MS.gene038620:intron | 30.0% |
! | TCACGTGATGTGATTTTATT+GGG | + | chr8.3:38753111-38753130 | MS.gene038620:intron | 30.0% |
! | TGTTTTGCTGGATTTTGTTA+TGG | + | chr8.3:38754378-38754397 | MS.gene038620:intron | 30.0% |
!! | AACTTCCTTGATGATTTTAG+TGG | + | chr8.3:38754197-38754216 | MS.gene038620:intron | 30.0% |
!! | ATATATGCTTTGAGTGGTTT+TGG | + | chr8.3:38756468-38756487 | MS.gene038620:intron | 30.0% |
!! | GAATTTTGTATTTCTGAGCA+TGG | - | chr8.3:38755267-38755286 | None:intergenic | 30.0% |
!! | GCAACCATTTTTGAATTTAC+TGG | + | chr8.3:38753159-38753178 | MS.gene038620:intron | 30.0% |
!! | GTTTTGCTGGATTTTGTTAT+GGG | + | chr8.3:38754379-38754398 | MS.gene038620:intron | 30.0% |
!!! | AATCTCTTCTAAAGTTTTCC+CGG | - | chr8.3:38752750-38752769 | None:intergenic | 30.0% |
!!! | ACAGAAGTTTTTTACTAGGT+TGG | + | chr8.3:38754894-38754913 | MS.gene038620:intron | 30.0% |
!!! | AGAGAATTCGGTGTTTTAAA+TGG | + | chr8.3:38756538-38756557 | MS.gene038620:intron | 30.0% |
!!! | CTCACTTTTAGAGTTTAGTT+AGG | + | chr8.3:38756239-38756258 | MS.gene038620:intron | 30.0% |
!!! | GTTTTGAAGCTTATATGTGT+CGG | + | chr8.3:38753298-38753317 | MS.gene038620:intron | 30.0% |
AAACAGTCACAGTAGTTAAC+TGG | - | chr8.3:38753687-38753706 | None:intergenic | 35.0% | |
AAAGAATCATAATCTGGCAG+AGG | - | chr8.3:38752830-38752849 | None:intergenic | 35.0% | |
AAAGGTAACATCATGTATGC+TGG | - | chr8.3:38755329-38755348 | None:intergenic | 35.0% | |
AAGCTAACATCAGGAACTAA+AGG | - | chr8.3:38753085-38753104 | None:intergenic | 35.0% | |
AATCACAATCCCTTCTAACA+TGG | - | chr8.3:38753846-38753865 | None:intergenic | 35.0% | |
ACATATGCTCAATCATGAAG+TGG | + | chr8.3:38755682-38755701 | MS.gene038620:intron | 35.0% | |
ACTAAGATCCAGCAAAAAGA+TGG | - | chr8.3:38754777-38754796 | None:intergenic | 35.0% | |
AGAACATCTAACATCGTTGT+AGG | - | chr8.3:38754251-38754270 | None:intergenic | 35.0% | |
ATAGATATCAATTTGCAGGG+AGG | + | chr8.3:38756762-38756781 | MS.gene038620:CDS | 35.0% | |
ATCCTTGCACAAATTGTCTA+TGG | - | chr8.3:38754581-38754600 | None:intergenic | 35.0% | |
ATGAGCAAAAAACTCTAGCT+TGG | - | chr8.3:38755788-38755807 | None:intergenic | 35.0% | |
ATTGCGAAAAATAGCCATGA+CGG | + | chr8.3:38753335-38753354 | MS.gene038620:intron | 35.0% | |
CAGAACGTAGCATTTATCTA+AGG | + | chr8.3:38753738-38753757 | MS.gene038620:intron | 35.0% | |
CGTCATATCCAATCAGTAAA+GGG | + | chr8.3:38753384-38753403 | MS.gene038620:intron | 35.0% | |
CGTCCCAGTAAATTCAAAAA+TGG | - | chr8.3:38753166-38753185 | None:intergenic | 35.0% | |
CTTAGATAAATGCTACGTTC+TGG | - | chr8.3:38753740-38753759 | None:intergenic | 35.0% | |
GACTATTAGTTACTTGTCAG+AGG | - | chr8.3:38754979-38754998 | None:intergenic | 35.0% | |
GATATCAACCACATTGAATC+TGG | + | chr8.3:38752797-38752816 | MS.gene038620:CDS | 35.0% | |
GTGAAGCATGCATTTGAATT+AGG | + | chr8.3:38754067-38754086 | MS.gene038620:intron | 35.0% | |
GTGCTACACTATTAAGTACA+AGG | - | chr8.3:38753514-38753533 | None:intergenic | 35.0% | |
TAAAGGAGAACCAGATACAA+TGG | - | chr8.3:38753717-38753736 | None:intergenic | 35.0% | |
TAAATGCTACGTTCTGGTAA+AGG | - | chr8.3:38753734-38753753 | None:intergenic | 35.0% | |
TAGACTAGATTGTGGGAAAT+TGG | + | chr8.3:38756507-38756526 | MS.gene038620:intron | 35.0% | |
TAGTTACTTGTCAGAGGTAA+TGG | - | chr8.3:38754973-38754992 | None:intergenic | 35.0% | |
TATGGGTTTACTCCAATCTT+TGG | + | chr8.3:38754396-38754415 | MS.gene038620:intron | 35.0% | |
TGACTCATAGACTAGATTGT+GGG | + | chr8.3:38756500-38756519 | MS.gene038620:intron | 35.0% | |
TTAAATGCAGTCCTATGCTA+TGG | - | chr8.3:38755845-38755864 | None:intergenic | 35.0% | |
TTCCATCATCCATGTTAGAA+GGG | + | chr8.3:38753834-38753853 | MS.gene038620:intron | 35.0% | |
TTGAGCATATGTATGTTGCA+TGG | - | chr8.3:38755674-38755693 | None:intergenic | 35.0% | |
! | AGTTCCTGATGTTAGCTTAT+TGG | + | chr8.3:38753087-38753106 | MS.gene038620:intron | 35.0% |
! | ATTGTAGCCAGTGTTATTGA+TGG | - | chr8.3:38753468-38753487 | None:intergenic | 35.0% |
! | CCTTTACTGATTGGATATGA+CGG | - | chr8.3:38753386-38753405 | None:intergenic | 35.0% |
! | CTTCGAGTTCTTATCAAGAA+CGG | + | chr8.3:38752909-38752928 | MS.gene038620:CDS | 35.0% |
! | GTCACGTGATGTGATTTTAT+TGG | + | chr8.3:38753110-38753129 | MS.gene038620:intron | 35.0% |
! | GTTCCTGATGTTAGCTTATT+GGG | + | chr8.3:38753088-38753107 | MS.gene038620:intron | 35.0% |
! | TAGTCCCTATCAGATCTTTT+TGG | + | chr8.3:38754994-38755013 | MS.gene038620:intron | 35.0% |
! | TGCATGATGATGAATTAGTG+AGG | + | chr8.3:38756868-38756887 | MS.gene038620:intron | 35.0% |
! | TTGTAGCCAGTGTTATTGAT+GGG | - | chr8.3:38753467-38753486 | None:intergenic | 35.0% |
!! | AAGTATATCAAGGTACTGTG+TGG | + | chr8.3:38755213-38755232 | MS.gene038620:CDS | 35.0% |
!! | ATCGAGTGTTGACTAATAGT+AGG | + | chr8.3:38756574-38756593 | MS.gene038620:intron | 35.0% |
!! | TTGAACAGGCTATTTCTTCA+AGG | + | chr8.3:38755160-38755179 | MS.gene038620:intron | 35.0% |
!! | TTTTTACTAGGTTGGAAGCT+CGG | + | chr8.3:38754902-38754921 | MS.gene038620:intron | 35.0% |
!!! | AAGGGCATCATAGTGTTTTA+TGG | + | chr8.3:38753402-38753421 | MS.gene038620:intron | 35.0% |
!!! | ATCTCTTCTAAAGTTTTCCC+GGG | - | chr8.3:38752749-38752768 | None:intergenic | 35.0% |
AAATCCTAGTGGTCCTTGAT+TGG | + | chr8.3:38754004-38754023 | MS.gene038620:intron | 40.0% | |
AACAGTGTACCACTCTTTGT+TGG | + | chr8.3:38756827-38756846 | MS.gene038620:intron | 40.0% | |
AAGACCATAATCCATGTCTC+CGG | - | chr8.3:38755590-38755609 | None:intergenic | 40.0% | |
AAGAGTTCAACAAAGCGTAC+TGG | + | chr8.3:38752854-38752873 | MS.gene038620:CDS | 40.0% | |
AATATCATTTACTGGCGTGG+CGG | + | chr8.3:38754540-38754559 | MS.gene038620:intron | 40.0% | |
AATGTTGCAGTGAGTTACAC+TGG | + | chr8.3:38754353-38754372 | MS.gene038620:intron | 40.0% | |
AGAGATTAAGCGTCACTATG+TGG | + | chr8.3:38752763-38752782 | MS.gene038620:CDS | 40.0% | |
AGGTTGAGTTCTATCCATCT+GGG | + | chr8.3:38756594-38756613 | MS.gene038620:intron | 40.0% | |
AGTGTAACTCACTGCAACAT+TGG | - | chr8.3:38754354-38754373 | None:intergenic | 40.0% | |
ATCAATTTGCAGGGAGGTTT+GGG | + | chr8.3:38756768-38756787 | MS.gene038620:intron | 40.0% | |
ATCCCTTCTAACATGGATGA+TGG | - | chr8.3:38753839-38753858 | None:intergenic | 40.0% | |
ATTTCCAAGCTGAGGTTAGT+AGG | - | chr8.3:38756894-38756913 | None:intergenic | 40.0% | |
CACAATCTAGTCTATGAGTC+AGG | - | chr8.3:38756501-38756520 | None:intergenic | 40.0% | |
CACCATAGACAATTTGTGCA+AGG | + | chr8.3:38754576-38754595 | MS.gene038620:intron | 40.0% | |
CCGTCATATCCAATCAGTAA+AGG | + | chr8.3:38753383-38753402 | MS.gene038620:intron | 40.0% | |
CTATGATGCCCTTTACTGAT+TGG | - | chr8.3:38753395-38753414 | None:intergenic | 40.0% | |
CTGACTCATAGACTAGATTG+TGG | + | chr8.3:38756499-38756518 | MS.gene038620:intron | 40.0% | |
CTTGCACAAATTGTCTATGG+TGG | - | chr8.3:38754578-38754597 | None:intergenic | 40.0% | |
GAAATACTCCGACAGATATG+CGG | - | chr8.3:38756045-38756064 | None:intergenic | 40.0% | |
GCACAAAACCAGATTCAATG+TGG | - | chr8.3:38752808-38752827 | None:intergenic | 40.0% | |
GCTGAATTGGTAGATTCCAA+TGG | + | chr8.3:38756351-38756370 | MS.gene038620:intron | 40.0% | |
GTCTGTTAATTTCCAAGCTG+AGG | - | chr8.3:38756902-38756921 | None:intergenic | 40.0% | |
GTTCCATCATCCATGTTAGA+AGG | + | chr8.3:38753833-38753852 | MS.gene038620:intron | 40.0% | |
TATACTTCGGATCTGATGGT+TGG | + | chr8.3:38756019-38756038 | MS.gene038620:intron | 40.0% | |
TATCAATTTGCAGGGAGGTT+TGG | + | chr8.3:38756767-38756786 | MS.gene038620:intron | 40.0% | |
TCCAAATGACCTACCAATCA+AGG | - | chr8.3:38754020-38754039 | None:intergenic | 40.0% | |
TCCTTGATTGGTAGGTCATT+TGG | + | chr8.3:38754016-38754035 | MS.gene038620:intron | 40.0% | |
TCTTATCAAGAACGGCGAAA+GGG | + | chr8.3:38752917-38752936 | MS.gene038620:CDS | 40.0% | |
TGACCCAATAAGCTAACATC+AGG | - | chr8.3:38753094-38753113 | None:intergenic | 40.0% | |
TGTTGCATGGCATATGTCAT+AGG | - | chr8.3:38755661-38755680 | None:intergenic | 40.0% | |
TTCTTATCAAGAACGGCGAA+AGG | + | chr8.3:38752916-38752935 | MS.gene038620:CDS | 40.0% | |
TTGATTGGTAGGTCATTTGG+AGG | + | chr8.3:38754019-38754038 | MS.gene038620:intron | 40.0% | |
! | ATAGTGTTGGGTAAAGCGTT+TGG | + | chr8.3:38753976-38753995 | MS.gene038620:intron | 40.0% |
! | ATATGGTGCTTGGATTAGGA+AGG | - | chr8.3:38756144-38756163 | None:intergenic | 40.0% |
! | GGATTGCGGTAACAGATTTT+TGG | + | chr8.3:38753356-38753375 | MS.gene038620:intron | 40.0% |
! | GGCATCATAGTGTTTTATGG+TGG | + | chr8.3:38753405-38753424 | MS.gene038620:intron | 40.0% |
! | TAGGTTGAGTTCTATCCATC+TGG | + | chr8.3:38756593-38756612 | MS.gene038620:intron | 40.0% |
! | TAGTGTTGGGTAAAGCGTTT+GGG | + | chr8.3:38753977-38753996 | MS.gene038620:intron | 40.0% |
! | TATGGTGCTTGGATTAGGAA+GGG | - | chr8.3:38756143-38756162 | None:intergenic | 40.0% |
! | TGTAGCCAGTGTTATTGATG+GGG | - | chr8.3:38753466-38753485 | None:intergenic | 40.0% |
!! | AAAATAGCCATGACGGATTG+CGG | + | chr8.3:38753342-38753361 | MS.gene038620:intron | 40.0% |
!! | ATGTGTCGGTGTTACAATTG+CGG | + | chr8.3:38753312-38753331 | MS.gene038620:intron | 40.0% |
!! | GTTACACTGGATTGTTTTGC+TGG | + | chr8.3:38754366-38754385 | MS.gene038620:intron | 40.0% |
!! | TTTCTGAGACAGTTATGCCA+GGG | + | chr8.3:38755617-38755636 | MS.gene038620:CDS | 40.0% |
!!! | GGCTGCAATGCTGTTTTTTA+CGG | + | chr8.3:38754622-38754641 | MS.gene038620:intron | 40.0% |
!!! | TCAAGAGTTTTGATTCCAGC+AGG | - | chr8.3:38755460-38755479 | None:intergenic | 40.0% |
!!! | TGCAATGCTGTTTTTTACGG+CGG | + | chr8.3:38754625-38754644 | MS.gene038620:intron | 40.0% |
AAAGAACATATCCCAGTGGC+TGG | - | chr8.3:38756721-38756740 | None:intergenic | 45.0% | |
AATTCTGCTGCAAGTTCTGC+TGG | + | chr8.3:38755403-38755422 | MS.gene038620:CDS | 45.0% | |
AGACCATAATCCATGTCTCC+GGG | - | chr8.3:38755589-38755608 | None:intergenic | 45.0% | |
AGCAGAATTGCTTGCTTGAC+CGG | - | chr8.3:38755392-38755411 | None:intergenic | 45.0% | |
AGGCACAGCTAACATAGCTT+AGG | - | chr8.3:38753626-38753645 | None:intergenic | 45.0% | |
ATTGTGGGAAATTGGCGTTC+TGG | + | chr8.3:38756515-38756534 | MS.gene038620:intron | 45.0% | |
ATTTGTGATATTCCTCCGCC+TGG | + | chr8.3:38756428-38756447 | MS.gene038620:CDS | 45.0% | |
CAGCAAAGAACATATCCCAG+TGG | - | chr8.3:38756725-38756744 | None:intergenic | 45.0% | |
CTATGTTCATCTTCCGTCCA+AGG | - | chr8.3:38752947-38752966 | None:intergenic | 45.0% | |
CTTGGACGGAAGATGAACAT+AGG | + | chr8.3:38752945-38752964 | MS.gene038620:CDS | 45.0% | |
CTTGTAGGGGGCAATTCTTA+TGG | + | chr8.3:38756091-38756110 | MS.gene038620:intron | 45.0% | |
CTTTCCCCCATCAATAACAC+TGG | + | chr8.3:38753458-38753477 | MS.gene038620:intron | 45.0% | |
GAGAAGAAGGGTTGGATATC+TGG | + | chr8.3:38756993-38757012 | MS.gene038620:CDS | 45.0% | |
GATACAACTGGTCCTCCTAT+AGG | - | chr8.3:38755535-38755554 | None:intergenic | 45.0% | |
GCCAATATCATTTACTGGCG+TGG | + | chr8.3:38754537-38754556 | MS.gene038620:intron | 45.0% | |
GCCACGCCAGTAAATGATAT+TGG | - | chr8.3:38754541-38754560 | None:intergenic | 45.0% | |
GGATCAATGAGTTGCAGGAT+TGG | + | chr8.3:38756382-38756401 | MS.gene038620:intron | 45.0% | |
GGCATAACTGTCTCAGAAAC+TGG | - | chr8.3:38755616-38755635 | None:intergenic | 45.0% | |
GGTATTATATCCGGGTGTAG+AGG | + | chr8.3:38756957-38756976 | MS.gene038620:CDS | 45.0% | |
GTAACTCACTGCAACATTGG+AGG | - | chr8.3:38754351-38754370 | None:intergenic | 45.0% | |
GTACCAACTGCAGATACAAC+TGG | - | chr8.3:38755547-38755566 | None:intergenic | 45.0% | |
GTGACTGGCGAAGTATATCA+AGG | + | chr8.3:38755203-38755222 | MS.gene038620:CDS | 45.0% | |
TACACTGTTCCCCAAAATGC+AGG | - | chr8.3:38756816-38756835 | None:intergenic | 45.0% | |
TAGATTCCAATGGTGACTGG+CGG | + | chr8.3:38756361-38756380 | MS.gene038620:intron | 45.0% | |
TAGGGGGCAATTCTTATGGT+TGG | + | chr8.3:38756095-38756114 | MS.gene038620:intron | 45.0% | |
TGAAGGAGGAGCTGTGAAAA+GGG | + | chr8.3:38752877-38752896 | MS.gene038620:CDS | 45.0% | |
TGGTAGATTCCAATGGTGAC+TGG | + | chr8.3:38756358-38756377 | MS.gene038620:intron | 45.0% | |
TTGCTGCAGATTTGCAGCAA+TGG | + | chr8.3:38756739-38756758 | MS.gene038620:CDS | 45.0% | |
TTGCTTGCTTGACCGGTAAT+TGG | - | chr8.3:38755385-38755404 | None:intergenic | 45.0% | |
! | ACGAGTCTCCATCTTTTTGC+TGG | + | chr8.3:38754766-38754785 | MS.gene038620:intron | 45.0% |
! | AGTGTTGGGTAAAGCGTTTG+GGG | + | chr8.3:38753978-38753997 | MS.gene038620:intron | 45.0% |
! | CCAGTGAATTTTACTGCTCC+CGG | + | chr8.3:38755568-38755587 | MS.gene038620:CDS | 45.0% |
! | GGAGACATGGATTATGGTCT+TGG | + | chr8.3:38755589-38755608 | MS.gene038620:CDS | 45.0% |
! | GGCAGGATATATGCTTTGAG+TGG | + | chr8.3:38756462-38756481 | MS.gene038620:CDS | 45.0% |
! | GTACTTTGGGGAGAGAAGAA+GGG | + | chr8.3:38756981-38757000 | MS.gene038620:CDS | 45.0% |
! | GTAGCCAGTGTTATTGATGG+GGG | - | chr8.3:38753465-38753484 | None:intergenic | 45.0% |
! | GTTTGGGGTTCAAATCCTAG+TGG | + | chr8.3:38753993-38754012 | MS.gene038620:intron | 45.0% |
! | TCAACAAAGCGTACTGGTGA+AGG | + | chr8.3:38752860-38752879 | MS.gene038620:CDS | 45.0% |
! | TGACGGTTGACTCAACTAGT+AGG | + | chr8.3:38753948-38753967 | MS.gene038620:intron | 45.0% |
! | TGTACCACTCTTTGTTGGCT+TGG | + | chr8.3:38756832-38756851 | MS.gene038620:intron | 45.0% |
! | TGTACTTTGGGGAGAGAAGA+AGG | + | chr8.3:38756980-38756999 | MS.gene038620:CDS | 45.0% |
! | TTGTGCAAGGATGCTTGCTA+TGG | + | chr8.3:38754589-38754608 | MS.gene038620:intron | 45.0% |
!! | GTTTCTGAGACAGTTATGCC+AGG | + | chr8.3:38755616-38755635 | MS.gene038620:CDS | 45.0% |
!! | TGTGCAAGGATGCTTGCTAT+GGG | + | chr8.3:38754590-38754609 | MS.gene038620:intron | 45.0% |
!! | TTCTGAGACAGTTATGCCAG+GGG | + | chr8.3:38755618-38755637 | MS.gene038620:CDS | 45.0% |
!! | TTGGCGTTCTGGAGAGAATT+CGG | + | chr8.3:38756526-38756545 | MS.gene038620:intron | 45.0% |
!!! | AGAGTTTTGATTCCAGCAGG+TGG | - | chr8.3:38755457-38755476 | None:intergenic | 45.0% |
!!! | GAGTTTTGATTCCAGCAGGT+GGG | - | chr8.3:38755456-38755475 | None:intergenic | 45.0% |
!! | TTATTATTATTATTATACTT+CGG | + | chr8.3:38756006-38756025 | MS.gene038620:intron | 5.0% |
AAAATCGCGGCTGATGTACC+CGG | + | chr8.3:38752728-38752747 | MS.gene038620:CDS | 50.0% | |
AAATGGGTAGCAGCTGTGAG+TGG | + | chr8.3:38752633-38752652 | MS.gene038620:CDS | 50.0% | |
AATTTGCAGGGAGGTTTGGG+TGG | + | chr8.3:38756771-38756790 | MS.gene038620:intron | 50.0% | |
AGCCGAACAGCCATCACAAT+CGG | - | chr8.3:38756684-38756703 | None:intergenic | 50.0% | |
AGCTGTGAAAAGGGGAGCTA+AGG | + | chr8.3:38752886-38752905 | MS.gene038620:CDS | 50.0% | |
ATTGATCCGCCAGTCACCAT+TGG | - | chr8.3:38756370-38756389 | None:intergenic | 50.0% | |
CAGTTTCGTCGACGTCAGAA+TGG | - | chr8.3:38754657-38754676 | None:intergenic | 50.0% | |
CCAAAGTACACCTCTACACC+CGG | - | chr8.3:38756970-38756989 | None:intergenic | 50.0% | |
CCGGGAGCAGTAAAATTCAC+TGG | - | chr8.3:38755571-38755590 | None:intergenic | 50.0% | |
CCTACCAATCAAGGACCACT+AGG | - | chr8.3:38754011-38754030 | None:intergenic | 50.0% | |
CCTAGTGGTCCTTGATTGGT+AGG | + | chr8.3:38754008-38754027 | MS.gene038620:intron | 50.0% | |
GAAGGAGGAGCTGTGAAAAG+GGG | + | chr8.3:38752878-38752897 | MS.gene038620:CDS | 50.0% | |
GCACCTCAAGGACCAATTAC+CGG | + | chr8.3:38755370-38755389 | MS.gene038620:CDS | 50.0% | |
GCATGACTGTCCGATTGTGA+TGG | + | chr8.3:38756671-38756690 | MS.gene038620:CDS | 50.0% | |
GGACCAGTTGTATCTGCAGT+TGG | + | chr8.3:38755541-38755560 | MS.gene038620:CDS | 50.0% | |
GGAGACATTTCAGCACCTCA+AGG | + | chr8.3:38755358-38755377 | MS.gene038620:CDS | 50.0% | |
GGATCGATGGGAGAAAATCG+CGG | + | chr8.3:38752715-38752734 | MS.gene038620:CDS | 50.0% | |
GTCATAGGACCCAGGTTCAT+TGG | - | chr8.3:38755646-38755665 | None:intergenic | 50.0% | |
GTCCGATTGTGATGGCTGTT+CGG | + | chr8.3:38756679-38756698 | MS.gene038620:CDS | 50.0% | |
GTGAAGGAGGAGCTGTGAAA+AGG | + | chr8.3:38752876-38752895 | MS.gene038620:CDS | 50.0% | |
TCCTCCAAGCCAACAAAGAG+TGG | - | chr8.3:38756839-38756858 | None:intergenic | 50.0% | |
TCGTCAAATAGCGGCTGTAG+TGG | - | chr8.3:38753588-38753607 | None:intergenic | 50.0% | |
TCTGTTACCGCAATCCGTCA+TGG | - | chr8.3:38753352-38753371 | None:intergenic | 50.0% | |
TGACCGGTAATTGGTCCTTG+AGG | - | chr8.3:38755376-38755395 | None:intergenic | 50.0% | |
TGACGTCGACGAAACTGATC+AGG | + | chr8.3:38754660-38754679 | MS.gene038620:intron | 50.0% | |
TGGCATATGTCATAGGACCC+AGG | - | chr8.3:38755654-38755673 | None:intergenic | 50.0% | |
TTTGGGGAGAGAAGAAGGGT+TGG | + | chr8.3:38756985-38757004 | MS.gene038620:CDS | 50.0% | |
! | ACAAAGCGTACTGGTGAAGG+AGG | + | chr8.3:38752863-38752882 | MS.gene038620:CDS | 50.0% |
! | ATGGTTGGCCGCATATCTGT+CGG | + | chr8.3:38756034-38756053 | MS.gene038620:intron | 50.0% |
! | CGGGTGTAGAGGTGTACTTT+GGG | + | chr8.3:38756968-38756987 | MS.gene038620:CDS | 50.0% |
! | GGGTGTAGAGGTGTACTTTG+GGG | + | chr8.3:38756969-38756988 | MS.gene038620:CDS | 50.0% |
! | TGCATTGGCGAATTATCCCG+AGG | + | chr8.3:38752685-38752704 | MS.gene038620:CDS | 50.0% |
! | TTTTACTGCTCCCGGAGACA+TGG | + | chr8.3:38755576-38755595 | MS.gene038620:CDS | 50.0% |
!! | ACCACTCTTTGTTGGCTTGG+AGG | + | chr8.3:38756835-38756854 | MS.gene038620:intron | 50.0% |
!! | CAGGCTATTTCTTCAAGGCC+TGG | + | chr8.3:38755165-38755184 | MS.gene038620:intron | 50.0% |
!! | GCATGGCTTGCTACTTGTGT+AGG | - | chr8.3:38755250-38755269 | None:intergenic | 50.0% |
!! | GTGCAAGGATGCTTGCTATG+GGG | + | chr8.3:38754591-38754610 | MS.gene038620:intron | 50.0% |
!! | TGCAAGGATGCTTGCTATGG+GGG | + | chr8.3:38754592-38754611 | MS.gene038620:intron | 50.0% |
!!! | CTCGGATTGGCCTGCATTTT+GGG | + | chr8.3:38756803-38756822 | MS.gene038620:intron | 50.0% |
!!! | TCGGATTGGCCTGCATTTTG+GGG | + | chr8.3:38756804-38756823 | MS.gene038620:intron | 50.0% |
!!! | TCTCGGATTGGCCTGCATTT+TGG | + | chr8.3:38756802-38756821 | MS.gene038620:intron | 50.0% |
AAATCGCGGCTGATGTACCC+GGG | + | chr8.3:38752729-38752748 | MS.gene038620:CDS | 55.0% | |
AAGGCCTGGAGAACCATGGA+TGG | + | chr8.3:38755179-38755198 | MS.gene038620:CDS | 55.0% | |
AGAACCATGGATGGGGTGAC+TGG | + | chr8.3:38755188-38755207 | MS.gene038620:CDS | 55.0% | |
AGCGTGTATTCCAGCAGGTG+GGG | - | chr8.3:38755494-38755513 | None:intergenic | 55.0% | |
AGGCCTGGAGAACCATGGAT+GGG | + | chr8.3:38755180-38755199 | MS.gene038620:CDS | 55.0% | |
ATACACGCTGCTCCTGGGAT+CGG | + | chr8.3:38755505-38755524 | MS.gene038620:CDS | 55.0% | |
CAGCGTGTATTCCAGCAGGT+GGG | - | chr8.3:38755495-38755514 | None:intergenic | 55.0% | |
CAGTGTTCAGTCCAGCCACT+GGG | + | chr8.3:38756707-38756726 | MS.gene038620:CDS | 55.0% | |
CTGGAATACACGCTGCTCCT+GGG | + | chr8.3:38755500-38755519 | MS.gene038620:CDS | 55.0% | |
CTTCAAGGCCTGGAGAACCA+TGG | + | chr8.3:38755175-38755194 | MS.gene038620:CDS | 55.0% | |
GAATTATCCCGAGGACGCTG+TGG | + | chr8.3:38752694-38752713 | MS.gene038620:CDS | 55.0% | |
GAGGCCTACTAACCTCAGCT+TGG | + | chr8.3:38756887-38756906 | MS.gene038620:intron | 55.0% | |
TTGATTCCAGCAGGTGGGAC+TGG | - | chr8.3:38755451-38755470 | None:intergenic | 55.0% | |
! | CCGGGTGTAGAGGTGTACTT+TGG | + | chr8.3:38756967-38756986 | MS.gene038620:CDS | 55.0% |
! | CTGGCGGATCAATGAGTTGC+AGG | + | chr8.3:38756377-38756396 | MS.gene038620:intron | 55.0% |
! | GCTCCCGGAGACATGGATTA+TGG | + | chr8.3:38755583-38755602 | MS.gene038620:CDS | 55.0% |
! | TGGGACTGGAGGAGCTTGTT+CGG | - | chr8.3:38755437-38755456 | None:intergenic | 55.0% |
! | TTTGGGTGGTGGTGAGGTCT+CGG | + | chr8.3:38756785-38756804 | MS.gene038620:intron | 55.0% |
!! | AACGGCGAAAGGGTGTTCCT+TGG | + | chr8.3:38752927-38752946 | MS.gene038620:CDS | 55.0% |
!! | CCAGGGGTACCAATGAACCT+GGG | + | chr8.3:38755634-38755653 | MS.gene038620:CDS | 55.0% |
!! | GCGAAAGGGTGTTCCTTGGA+CGG | + | chr8.3:38752931-38752950 | MS.gene038620:CDS | 55.0% |
!! | GCTTGCTATGGGGGTGCTAT+CGG | + | chr8.3:38754601-38754620 | MS.gene038620:intron | 55.0% |
ATTCCAGCAGGTGGGACTGG+AGG | - | chr8.3:38755448-38755467 | None:intergenic | 60.0% | |
CACCCCATCCATGGTTCTCC+AGG | - | chr8.3:38755186-38755205 | None:intergenic | 60.0% | |
CATCGATCCACAGCGTCCTC+GGG | - | chr8.3:38752704-38752723 | None:intergenic | 60.0% | |
CCATCGATCCACAGCGTCCT+CGG | - | chr8.3:38752705-38752724 | None:intergenic | 60.0% | |
CCCAGGTTCATTGGTACCCC+TGG | - | chr8.3:38755637-38755656 | None:intergenic | 60.0% | |
CCTATAGGTTGCCCGATCCC+AGG | - | chr8.3:38755520-38755539 | None:intergenic | 60.0% | |
CCTGGGATCGGGCAACCTAT+AGG | + | chr8.3:38755517-38755536 | MS.gene038620:CDS | 60.0% | |
CGAGGACGCTGTGGATCGAT+GGG | + | chr8.3:38752703-38752722 | MS.gene038620:CDS | 60.0% | |
GCAGCGTGTATTCCAGCAGG+TGG | - | chr8.3:38755496-38755515 | None:intergenic | 60.0% | |
GCAGTGTTCAGTCCAGCCAC+TGG | + | chr8.3:38756706-38756725 | MS.gene038620:CDS | 60.0% | |
GCTGGAATACACGCTGCTCC+TGG | + | chr8.3:38755499-38755518 | MS.gene038620:CDS | 60.0% | |
GGAGCAGCGTGTATTCCAGC+AGG | - | chr8.3:38755499-38755518 | None:intergenic | 60.0% | |
GGCCTGGAGAACCATGGATG+GGG | + | chr8.3:38755181-38755200 | MS.gene038620:CDS | 60.0% | |
GGGATCGGGCAACCTATAGG+AGG | + | chr8.3:38755520-38755539 | MS.gene038620:CDS | 60.0% | |
TACACGCTGCTCCTGGGATC+GGG | + | chr8.3:38755506-38755525 | MS.gene038620:CDS | 60.0% | |
TCCTGCCCGTACTCGATACC+AGG | - | chr8.3:38756449-38756468 | None:intergenic | 60.0% | |
TGCCCGTACTCGATACCAGG+CGG | - | chr8.3:38756446-38756465 | None:intergenic | 60.0% | |
TGTATTCCAGCAGGTGGGGC+TGG | - | chr8.3:38755490-38755509 | None:intergenic | 60.0% | |
TTCGCCAGTCACCCCATCCA+TGG | - | chr8.3:38755195-38755214 | None:intergenic | 60.0% | |
TTGCAGGGAGGTTTGGGTGG+TGG | + | chr8.3:38756774-38756793 | MS.gene038620:intron | 60.0% | |
! | CCTCCGCCTGGTATCGAGTA+CGG | + | chr8.3:38756440-38756459 | MS.gene038620:CDS | 60.0% |
! | CTCCGCCTGGTATCGAGTAC+GGG | + | chr8.3:38756441-38756460 | MS.gene038620:CDS | 60.0% |
! | GTGGTGGTGAGGTCTCGGAT+TGG | + | chr8.3:38756790-38756809 | MS.gene038620:intron | 60.0% |
!! | GCCAGGGGTACCAATGAACC+TGG | + | chr8.3:38755633-38755652 | MS.gene038620:CDS | 60.0% |
AATCCTCCAGCCCCACCTGC+TGG | + | chr8.3:38755481-38755500 | MS.gene038620:CDS | 65.0% | |
ATTCCAGCAGGTGGGGCTGG+AGG | - | chr8.3:38755487-38755506 | None:intergenic | 65.0% | |
CCGAGGACGCTGTGGATCGA+TGG | + | chr8.3:38752702-38752721 | MS.gene038620:CDS | 65.0% | |
CCGTACTCGATACCAGGCGG+AGG | - | chr8.3:38756443-38756462 | None:intergenic | 65.0% | |
! | GCCTGGTATCGAGTACGGGC+AGG | + | chr8.3:38756445-38756464 | MS.gene038620:CDS | 65.0% |
! | GGGAGGTTTGGGTGGTGGTG+AGG | + | chr8.3:38756779-38756798 | MS.gene038620:intron | 65.0% |
GCTCCTCCAGTCCCACCTGC+TGG | + | chr8.3:38755442-38755461 | MS.gene038620:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 38752626 | 38757023 | 38752626 | ID=MS.gene038620 |
chr8.3 | mRNA | 38752626 | 38757023 | 38752626 | ID=MS.gene038620.t1;Parent=MS.gene038620 |
chr8.3 | exon | 38752626 | 38752966 | 38752626 | ID=MS.gene038620.t1.exon1;Parent=MS.gene038620.t1 |
chr8.3 | CDS | 38752626 | 38752966 | 38752626 | ID=cds.MS.gene038620.t1;Parent=MS.gene038620.t1 |
chr8.3 | exon | 38755168 | 38755655 | 38755168 | ID=MS.gene038620.t1.exon2;Parent=MS.gene038620.t1 |
chr8.3 | CDS | 38755168 | 38755655 | 38755168 | ID=cds.MS.gene038620.t1;Parent=MS.gene038620.t1 |
chr8.3 | exon | 38756399 | 38756483 | 38756399 | ID=MS.gene038620.t1.exon3;Parent=MS.gene038620.t1 |
chr8.3 | CDS | 38756399 | 38756483 | 38756399 | ID=cds.MS.gene038620.t1;Parent=MS.gene038620.t1 |
chr8.3 | exon | 38756596 | 38756783 | 38756596 | ID=MS.gene038620.t1.exon4;Parent=MS.gene038620.t1 |
chr8.3 | CDS | 38756596 | 38756783 | 38756596 | ID=cds.MS.gene038620.t1;Parent=MS.gene038620.t1 |
chr8.3 | exon | 38756920 | 38757023 | 38756920 | ID=MS.gene038620.t1.exon5;Parent=MS.gene038620.t1 |
chr8.3 | CDS | 38756920 | 38757023 | 38756920 | ID=cds.MS.gene038620.t1;Parent=MS.gene038620.t1 |
Gene Sequence |
Protein sequence |