AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03868

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03868.t1 MTR_4g052620 96.552 261 9 0 1 261 1 261 0.0 525
MS.gene03868.t1 MTR_2g086690 62.069 261 76 8 6 260 5 248 2.41e-106 308
MS.gene03868.t1 MTR_7g105170 61.582 177 65 2 3 176 2 178 2.08e-76 233
MS.gene03868.t1 MTR_5g012080 34.167 240 136 8 6 240 8 230 7.48e-40 141
MS.gene03868.t1 MTR_6g011860 39.037 187 102 4 3 183 13 193 3.20e-39 140
MS.gene03868.t1 MTR_4g075980 41.011 178 90 5 7 182 17 181 4.26e-39 138
MS.gene03868.t1 MTR_2g064090 45.223 157 80 5 4 160 5 155 4.85e-39 139
MS.gene03868.t1 MTR_1g096430 44.375 160 81 4 1 160 3 154 5.74e-39 139
MS.gene03868.t1 MTR_5g041940 44.586 157 80 4 5 160 3 153 5.85e-39 136
MS.gene03868.t1 MTR_4g134460 43.558 163 82 3 2 164 51 203 5.81e-38 138
MS.gene03868.t1 MTR_4g036030 44.937 158 73 6 6 160 8 154 7.35e-38 136
MS.gene03868.t1 MTR_2g093810 46.250 160 75 5 4 159 13 165 9.38e-38 135
MS.gene03868.t1 MTR_5g076850 43.590 156 81 4 4 159 5 153 1.64e-37 139
MS.gene03868.t1 MTR_6g477900 43.125 160 84 4 5 164 6 158 2.44e-37 132
MS.gene03868.t1 MTR_4g081870 43.312 157 82 4 5 160 9 159 3.03e-37 132
MS.gene03868.t1 MTR_8g076110 43.275 171 83 6 1 168 2 161 5.32e-37 133
MS.gene03868.t1 MTR_8g059170 42.767 159 80 5 4 160 13 162 1.23e-36 132
MS.gene03868.t1 MTR_5g021710 43.558 163 78 5 1 160 4 155 1.45e-36 132
MS.gene03868.t1 MTR_3g096920 40.237 169 94 3 2 170 4 165 1.76e-36 131
MS.gene03868.t1 MTR_8g467490 32.411 253 151 7 1 240 10 255 3.11e-36 132
MS.gene03868.t1 MTR_3g064580 35.268 224 120 7 4 227 5 203 3.25e-36 136
MS.gene03868.t1 MTR_8g094580 40.351 171 93 5 5 173 7 170 6.66e-36 129
MS.gene03868.t1 MTR_3g088110 41.916 167 86 4 2 166 4 161 1.20e-35 129
MS.gene03868.t1 MTR_3g116070 47.407 135 66 2 2 135 20 150 2.74e-35 129
MS.gene03868.t1 MTR_1g008740 34.842 221 131 6 2 220 10 219 3.87e-35 129
MS.gene03868.t1 MTR_1g008740 34.842 221 131 6 2 220 24 233 4.35e-35 129
MS.gene03868.t1 MTR_3g109340 40.237 169 91 4 2 169 19 178 1.03e-34 128
MS.gene03868.t1 MTR_2g062730 39.181 171 91 5 2 169 7 167 1.10e-34 127
MS.gene03868.t1 MTR_3g109340 40.237 169 90 4 2 169 19 177 1.18e-34 127
MS.gene03868.t1 MTR_7g100990 40.102 197 103 7 2 191 8 196 1.73e-34 127
MS.gene03868.t1 MTR_6g012670 40.936 171 92 5 5 174 20 182 2.24e-34 126
MS.gene03868.t1 MTR_6g084430 41.875 160 82 6 1 160 1 149 3.29e-34 126
MS.gene03868.t1 MTR_4g101680 37.566 189 90 7 6 191 8 171 4.03e-34 126
MS.gene03868.t1 MTR_2157s0010 39.773 176 93 4 5 172 8 178 4.17e-34 124
MS.gene03868.t1 MTR_2g079990 42.138 159 79 6 4 160 15 162 4.37e-34 126
MS.gene03868.t1 MTR_7g085220 40.120 167 82 5 5 160 8 167 4.41e-34 126
MS.gene03868.t1 MTR_4g089135 40.217 184 80 6 5 165 15 191 5.28e-34 125
MS.gene03868.t1 MTR_2g078700 46.970 132 64 3 5 135 23 149 1.12e-33 125
MS.gene03868.t1 MTR_8g024480 37.634 186 101 6 6 182 16 195 1.30e-33 126
MS.gene03868.t1 MTR_5g040420 44.118 136 70 3 1 135 10 140 1.33e-33 125
MS.gene03868.t1 MTR_5g014300 43.210 162 77 5 4 159 5 157 3.68e-33 123
MS.gene03868.t1 MTR_8g023840 44.231 156 73 5 6 159 12 155 8.15e-33 124
MS.gene03868.t1 MTR_2g080010 39.267 191 90 8 5 182 15 192 8.70e-33 122
MS.gene03868.t1 MTR_3g070030 41.401 157 84 4 5 160 19 168 9.92e-33 122
MS.gene03868.t1 MTR_3g435150 41.875 160 80 5 4 160 15 164 1.43e-32 121
MS.gene03868.t1 MTR_3g096920 43.662 142 73 3 2 143 4 138 1.61e-32 121
MS.gene03868.t1 MTR_2g079990 42.953 149 74 5 4 150 15 154 3.53e-32 122
MS.gene03868.t1 MTR_2g068880 39.894 188 93 9 2 174 18 200 3.65e-32 120
MS.gene03868.t1 MTR_1g069805 38.750 160 81 5 4 160 9 154 4.24e-32 119
MS.gene03868.t1 MTR_2g068920 37.104 221 112 10 2 209 17 223 4.70e-32 119
MS.gene03868.t1 MTR_2g086880 48.438 128 61 4 7 134 20 142 4.98e-32 124
MS.gene03868.t1 MTR_2g086880 48.438 128 61 4 7 134 20 142 5.18e-32 123
MS.gene03868.t1 MTR_8g023860 39.873 158 83 4 3 159 10 156 6.13e-32 122
MS.gene03868.t1 MTR_4g098630 41.772 158 84 5 4 159 5 156 6.86e-32 119
MS.gene03868.t1 MTR_4g108760 40.881 159 81 5 5 160 17 165 8.67e-32 120
MS.gene03868.t1 MTR_5g069030 42.038 157 82 5 5 160 25 173 1.29e-31 122
MS.gene03868.t1 MTR_3g096140 39.610 154 86 5 7 160 9 155 3.27e-31 117
MS.gene03868.t1 MTR_7g097090 38.750 160 81 5 4 160 9 154 3.57e-31 117
MS.gene03868.t1 MTR_4g035590 40.000 165 84 5 6 167 9 161 3.85e-31 118
MS.gene03868.t1 MTR_3g093040 39.241 158 87 5 4 160 107 256 4.23e-31 117
MS.gene03868.t1 MTR_8g099750 40.625 160 85 4 5 161 14 166 7.47e-31 114
MS.gene03868.t1 MTR_8g023900 40.000 165 82 5 1 159 184 337 9.98e-31 119
MS.gene03868.t1 MTR_8g023900 40.000 160 86 5 1 159 8 158 2.56e-29 115
MS.gene03868.t1 MTR_3g093050 40.252 159 86 5 3 160 20 170 1.33e-30 120
MS.gene03868.t1 MTR_7g011130 45.038 131 66 3 5 135 19 143 1.35e-30 117
MS.gene03868.t1 MTR_3g096140 39.241 158 89 5 7 164 9 159 1.51e-30 117
MS.gene03868.t1 MTR_1g090723 38.365 159 91 3 7 165 10 161 1.57e-30 119
MS.gene03868.t1 MTR_0036s0150 40.881 159 87 4 7 165 7 158 1.63e-30 119
MS.gene03868.t1 MTR_1g090723 38.365 159 91 3 7 165 10 161 1.74e-30 119
MS.gene03868.t1 MTR_3g093050 40.506 158 87 4 3 160 20 170 2.19e-30 119
MS.gene03868.t1 MTR_7g011120 38.095 168 95 4 5 172 8 166 2.93e-30 115
MS.gene03868.t1 MTR_2g064470 39.264 163 83 6 1 160 7 156 3.78e-30 115
MS.gene03868.t1 MTR_7g005280 39.752 161 83 5 2 161 12 159 3.93e-30 113
MS.gene03868.t1 MTR_1g090720 40.625 160 88 4 4 160 41 196 4.34e-30 117
MS.gene03868.t1 MTR_8g023930 39.873 158 83 4 3 159 22 168 4.83e-30 117
MS.gene03868.t1 MTR_1g090723 37.736 159 93 3 7 165 10 162 6.64e-30 118
MS.gene03868.t1 MTR_6g032770 44.361 133 66 4 5 135 18 144 1.63e-29 114
MS.gene03868.t1 MTR_5g090970 40.000 175 83 8 7 169 20 184 1.10e-28 111
MS.gene03868.t1 MTR_7g085260 41.045 134 71 3 5 135 17 145 3.98e-28 110
MS.gene03868.t1 MTR_5g090970 39.205 176 84 8 7 169 20 185 4.83e-28 109
MS.gene03868.t1 MTR_3g098810 40.964 166 77 7 5 160 14 168 2.76e-27 105
MS.gene03868.t1 MTR_8g063550 35.714 154 92 4 7 160 8 154 1.54e-26 105
MS.gene03868.t1 MTR_8g063550 35.714 154 92 4 7 160 8 154 1.54e-26 107
MS.gene03868.t1 MTR_3g098810 42.657 143 70 5 5 143 14 148 2.32e-26 101
MS.gene03868.t1 MTR_8g063550 35.714 154 92 4 7 160 8 154 2.73e-26 106
MS.gene03868.t1 MTR_1g097300 44.961 129 65 4 7 134 21 144 4.40e-26 107
MS.gene03868.t1 MTR_3g070040 39.623 159 82 6 5 160 8 155 2.58e-25 102
MS.gene03868.t1 MTR_8g093580 35.443 158 95 5 7 164 8 158 1.20e-24 102
MS.gene03868.t1 MTR_8g023880 36.047 172 78 7 4 159 6 161 2.65e-24 98.6
MS.gene03868.t1 MTR_3g096140 36.111 144 85 5 21 164 2 138 6.05e-23 96.3
MS.gene03868.t1 MTR_8g094580 40.708 113 63 3 63 173 6 116 3.91e-22 92.0
MS.gene03868.t1 MTR_4g094302 36.875 160 84 5 5 160 11 157 5.47e-22 90.5
MS.gene03868.t1 MTR_4g094302 40.909 132 64 4 5 135 11 129 1.46e-21 88.6
MS.gene03868.t1 MTR_3g096400 30.994 171 99 4 1 162 1 161 4.15e-17 77.8
MS.gene03868.t1 MTR_7g070140 38.372 86 52 1 51 135 5 90 2.43e-14 68.6
MS.gene03868.t1 MTR_8g093790 32.692 156 76 8 5 160 10 136 1.40e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03868.t1 AT3G44350 50.382 262 108 6 1 261 1 241 1.03e-83 250
MS.gene03868.t1 AT5G22380 55.794 233 95 4 1 231 1 227 6.53e-83 248
MS.gene03868.t1 AT3G44350 57.764 161 66 1 1 161 1 159 1.11e-64 199
MS.gene03868.t1 AT2G17040 41.758 182 91 5 2 181 3 171 4.32e-41 142
MS.gene03868.t1 AT1G71930 36.929 241 122 9 1 237 5 219 2.11e-39 139
MS.gene03868.t1 AT1G71930 36.929 241 122 9 1 237 5 219 2.11e-39 139
MS.gene03868.t1 AT4G17980 45.223 157 81 5 4 159 5 157 3.78e-39 137
MS.gene03868.t1 AT4G17980 45.223 157 81 5 4 159 5 157 5.97e-39 137
MS.gene03868.t1 AT1G69490 40.588 170 94 4 2 170 6 169 4.68e-38 134
MS.gene03868.t1 AT2G02450 43.506 154 77 3 7 160 53 196 7.58e-38 137
MS.gene03868.t1 AT2G02450 43.506 154 77 3 7 160 53 196 9.00e-38 137
MS.gene03868.t1 AT1G65910 43.312 157 82 4 4 160 5 154 1.56e-37 139
MS.gene03868.t1 AT3G17730 41.875 160 86 4 5 164 6 158 1.21e-36 130
MS.gene03868.t1 AT4G36160 41.954 174 78 6 4 174 9 162 1.27e-36 133
MS.gene03868.t1 AT4G36160 41.954 174 78 6 4 174 9 162 1.27e-36 133
MS.gene03868.t1 AT1G76420 43.030 165 82 5 2 164 19 173 1.39e-36 132
MS.gene03868.t1 AT4G36160 41.954 174 78 6 4 174 13 166 1.39e-36 133
MS.gene03868.t1 AT4G27410 42.767 159 78 5 4 160 13 160 1.52e-36 131
MS.gene03868.t1 AT5G17260 42.038 157 85 4 4 160 5 155 1.93e-36 135
MS.gene03868.t1 AT5G66300 31.071 280 148 10 4 253 11 275 1.94e-36 131
MS.gene03868.t1 AT5G46590 43.226 155 83 4 5 159 6 155 3.86e-36 130
MS.gene03868.t1 AT2G18060 43.125 160 77 5 4 160 8 156 4.40e-36 132
MS.gene03868.t1 AT2G18060 43.125 160 77 5 4 160 8 156 4.40e-36 132
MS.gene03868.t1 AT1G26870 47.794 136 65 3 1 135 12 142 6.56e-36 132
MS.gene03868.t1 AT1G01720 43.902 164 80 5 5 165 7 161 6.95e-36 129
MS.gene03868.t1 AT1G33060 43.038 158 83 4 3 160 22 172 1.34e-35 134
MS.gene03868.t1 AT1G33060 43.038 158 83 4 3 160 22 172 1.34e-35 134
MS.gene03868.t1 AT5G62380 40.385 156 85 4 5 160 7 154 2.38e-35 129
MS.gene03868.t1 AT5G62380 40.385 156 85 4 5 160 7 154 2.38e-35 129
MS.gene03868.t1 AT4G35580 44.304 158 81 5 3 160 7 157 2.57e-35 132
MS.gene03868.t1 AT4G35580 44.304 158 81 5 3 160 7 157 2.61e-35 132
MS.gene03868.t1 AT4G35580 44.304 158 81 5 3 160 7 157 2.66e-35 132
MS.gene03868.t1 AT3G15500 42.767 159 78 5 4 160 13 160 2.74e-35 129
MS.gene03868.t1 AT1G12260 43.671 158 75 6 6 160 8 154 3.22e-35 129
MS.gene03868.t1 AT2G24430 41.875 160 83 5 2 160 13 163 4.27e-35 128
MS.gene03868.t1 AT2G24430 41.875 160 83 5 2 160 13 163 4.27e-35 128
MS.gene03868.t1 AT4G27410 40.588 170 83 6 4 160 13 177 4.36e-35 128
MS.gene03868.t1 AT1G12260 43.671 158 75 6 6 160 8 154 5.92e-35 129
MS.gene03868.t1 AT5G24590 37.306 193 109 5 4 190 12 198 8.30e-35 130
MS.gene03868.t1 AT1G61110 40.642 187 91 6 5 179 16 194 8.62e-35 127
MS.gene03868.t1 AT1G79580 40.828 169 86 4 4 169 16 173 9.13e-35 128
MS.gene03868.t1 AT1G79580 40.828 169 86 4 4 169 16 173 9.13e-35 128
MS.gene03868.t1 AT1G79580 40.828 169 86 4 4 169 16 173 9.13e-35 128
MS.gene03868.t1 AT1G79580 40.828 169 86 4 4 169 16 173 9.13e-35 128
MS.gene03868.t1 AT1G79580 40.828 169 86 4 4 169 16 173 9.13e-35 128
MS.gene03868.t1 AT5G39820 41.892 148 80 3 2 148 17 159 1.12e-34 127
MS.gene03868.t1 AT1G52890 42.138 159 79 5 4 160 13 160 1.25e-34 127
MS.gene03868.t1 AT1G62700 42.405 158 77 6 6 160 8 154 1.58e-34 128
MS.gene03868.t1 AT1G62700 42.405 158 77 6 6 160 8 154 1.58e-34 128
MS.gene03868.t1 AT3G03200 35.610 205 118 6 4 208 5 195 3.72e-34 129
MS.gene03868.t1 AT3G18400 40.000 160 86 4 1 160 1 150 7.95e-34 124
MS.gene03868.t1 AT5G08790 41.011 178 91 6 2 173 4 173 9.51e-34 124
MS.gene03868.t1 AT1G77450 41.772 158 81 4 5 160 10 158 9.66e-34 123
MS.gene03868.t1 AT3G10480 40.764 157 87 4 4 160 26 176 1.41e-33 126
MS.gene03868.t1 AT3G61910 44.776 134 65 4 5 135 11 138 2.04e-33 124
MS.gene03868.t1 AT5G61430 41.509 159 80 5 5 160 16 164 2.12e-33 124
MS.gene03868.t1 AT5G46590 46.565 131 67 3 5 135 6 133 2.88e-33 122
MS.gene03868.t1 AT3G10480 40.764 157 86 4 4 160 26 175 3.68e-33 125
MS.gene03868.t1 AT3G10490 40.764 157 87 4 4 160 26 176 4.04e-33 121
MS.gene03868.t1 AT1G54330 40.764 157 83 4 4 160 5 151 4.20e-33 122
MS.gene03868.t1 AT1G56010 39.375 160 92 3 1 160 15 169 5.15e-33 122
MS.gene03868.t1 AT2G46770 45.522 134 64 4 5 135 16 143 5.92e-33 123
MS.gene03868.t1 AT3G15170 40.244 164 91 4 2 164 17 174 8.65e-33 122
MS.gene03868.t1 AT3G04070 41.071 168 80 7 4 160 9 168 1.40e-32 122
MS.gene03868.t1 AT5G63790 39.412 170 94 4 2 169 47 209 2.44e-32 120
MS.gene03868.t1 AT5G63790 39.412 170 94 4 2 169 57 219 3.13e-32 120
MS.gene03868.t1 AT1G32510 39.130 161 87 5 5 159 6 161 3.15e-32 120
MS.gene03868.t1 AT3G49530 38.608 158 91 4 3 160 11 162 4.28e-32 122
MS.gene03868.t1 AT4G10350 39.645 169 88 6 6 170 10 168 6.04e-32 120
MS.gene03868.t1 AT1G32770 45.865 133 63 4 6 135 17 143 6.75e-32 120
MS.gene03868.t1 AT3G10500 40.123 162 90 4 4 165 8 162 1.10e-31 122
MS.gene03868.t1 AT3G49530 38.608 158 91 4 3 160 11 162 1.23e-31 121
MS.gene03868.t1 AT3G29035 42.500 160 77 6 5 160 24 172 1.43e-31 119
MS.gene03868.t1 AT5G39610 40.881 159 81 5 5 160 20 168 1.55e-31 118
MS.gene03868.t1 AT5G07680 39.623 159 83 5 5 160 17 165 2.17e-31 119
MS.gene03868.t1 AT5G07680 39.623 159 83 5 5 160 3 151 2.38e-31 118
MS.gene03868.t1 AT3G10490 40.764 157 87 4 4 160 26 176 2.49e-31 120
MS.gene03868.t1 AT5G53950 47.368 133 62 4 5 135 17 143 3.25e-31 119
MS.gene03868.t1 AT3G04070 43.478 138 65 4 4 135 9 139 3.35e-31 119
MS.gene03868.t1 AT3G12910 41.143 175 86 6 7 169 23 192 3.56e-31 117
MS.gene03868.t1 AT3G15510 40.571 175 82 7 9 170 21 186 4.66e-31 118
MS.gene03868.t1 AT1G33280 38.650 163 91 4 6 168 9 162 5.92e-31 117
MS.gene03868.t1 AT3G12977 38.889 162 87 6 1 160 14 165 2.07e-30 115
MS.gene03868.t1 AT5G18270 38.854 157 88 4 5 160 21 170 2.18e-30 116
MS.gene03868.t1 AT3G04060 38.889 162 81 5 5 160 20 169 3.70e-30 115
MS.gene03868.t1 AT5G18270 38.854 157 88 4 5 160 21 170 3.81e-30 115
MS.gene03868.t1 AT5G13180 41.772 158 79 5 5 161 14 159 7.39e-30 112
MS.gene03868.t1 AT5G04410 38.889 162 92 5 4 165 8 162 1.11e-29 117
MS.gene03868.t1 AT3G44290 41.781 146 79 5 7 152 16 155 3.02e-29 110
MS.gene03868.t1 AT1G34180 37.736 159 92 4 7 165 18 169 5.94e-29 114
MS.gene03868.t1 AT5G04395 41.379 145 71 5 2 134 25 167 6.39e-29 108
MS.gene03868.t1 AT2G33480 40.764 157 81 5 5 161 15 159 6.95e-29 110
MS.gene03868.t1 AT5G22290 40.940 149 83 4 4 152 20 163 7.31e-29 112
MS.gene03868.t1 AT2G33480 39.490 157 81 4 5 161 15 157 1.01e-28 110
MS.gene03868.t1 AT3G10480 35.450 189 85 5 4 160 26 209 1.23e-28 114
MS.gene03868.t1 AT2G43000 36.723 177 102 5 7 182 20 187 1.27e-28 110
MS.gene03868.t1 AT1G34180 43.750 128 68 3 7 134 18 141 1.67e-28 114
MS.gene03868.t1 AT4G01550 38.312 154 83 3 8 159 7 150 2.00e-28 112
MS.gene03868.t1 AT3G44290 41.781 146 79 5 7 152 16 155 2.01e-28 110
MS.gene03868.t1 AT4G28530 35.754 179 74 6 5 160 10 170 6.73e-28 109
MS.gene03868.t1 AT2G27300 39.726 146 82 4 7 152 16 155 1.53e-27 108
MS.gene03868.t1 AT1G34190 42.969 128 69 3 7 134 18 141 1.56e-27 111
MS.gene03868.t1 AT5G09330 43.411 129 69 3 7 135 8 132 4.48e-27 109
MS.gene03868.t1 AT5G09330 43.411 129 69 3 7 135 8 132 4.48e-27 109
MS.gene03868.t1 AT5G09330 43.411 129 69 3 7 135 8 132 4.48e-27 109
MS.gene03868.t1 AT5G09330 43.411 129 69 3 7 135 8 132 4.48e-27 109
MS.gene03868.t1 AT5G09330 43.411 129 69 3 7 135 8 132 4.48e-27 109
MS.gene03868.t1 AT1G34180 34.911 169 95 4 7 165 18 181 2.39e-26 107
MS.gene03868.t1 AT5G64060 38.037 163 84 7 7 164 8 158 5.46e-26 104
MS.gene03868.t1 AT1G34180 39.855 138 71 3 7 134 18 153 5.78e-26 106
MS.gene03868.t1 AT4G01520 37.580 157 85 5 6 159 5 151 1.08e-25 103
MS.gene03868.t1 AT4G01540 38.065 155 83 5 8 159 7 151 1.31e-24 101
MS.gene03868.t1 AT3G04420 35.152 165 94 5 6 169 4 156 1.43e-24 99.8
MS.gene03868.t1 AT4G01540 38.065 155 83 5 8 159 7 151 2.47e-24 101
MS.gene03868.t1 AT4G01540 38.065 155 83 5 8 159 7 151 2.84e-24 100
MS.gene03868.t1 AT3G04420 36.129 155 87 4 6 159 4 147 3.63e-24 99.8
MS.gene03868.t1 AT4G01540 38.065 155 83 5 8 159 7 151 3.90e-24 100
MS.gene03868.t1 AT1G52880 38.889 162 82 5 9 160 21 175 7.59e-24 98.2
MS.gene03868.t1 AT1G32870 36.646 161 95 5 5 165 10 163 7.79e-23 97.4
MS.gene03868.t1 AT1G32870 36.646 161 95 5 5 165 10 163 1.01e-22 97.4
MS.gene03868.t1 AT1G32870 36.646 161 95 5 5 165 46 199 1.53e-22 96.7
MS.gene03868.t1 AT1G02250 35.032 157 87 5 6 159 4 148 2.16e-22 95.1
MS.gene03868.t1 AT1G02230 35.669 157 86 5 6 159 4 148 8.25e-22 93.6
MS.gene03868.t1 AT1G56010 41.237 97 56 1 64 160 7 102 2.74e-19 84.7
MS.gene03868.t1 AT3G12977 40.000 105 58 3 57 160 12 112 7.40e-19 83.2
MS.gene03868.t1 AT5G64530 39.695 131 61 7 5 134 3 116 1.07e-18 80.9
MS.gene03868.t1 AT5G64530 40.152 132 59 7 5 134 3 116 1.32e-18 81.6
MS.gene03868.t1 AT5G61430 38.679 106 57 3 58 160 1 101 6.44e-18 81.3
MS.gene03868.t1 AT1G01010 32.335 167 91 6 1 159 1 153 8.22e-18 82.8
MS.gene03868.t1 AT1G02220 31.902 163 95 6 6 167 4 151 1.60e-17 81.6
MS.gene03868.t1 AT4G10350 34.328 134 74 4 63 195 18 138 7.07e-17 79.0
MS.gene03868.t1 AT4G28530 38.739 111 39 3 5 95 10 111 3.75e-16 77.0
MS.gene03868.t1 AT2G33480 41.237 97 53 3 65 161 10 102 9.89e-16 74.3
MS.gene03868.t1 AT3G04430 36.364 110 66 2 11 120 6 111 1.74e-14 70.5
MS.gene03868.t1 AT5G50820 31.056 161 95 5 5 162 17 164 1.08e-13 68.2
MS.gene03868.t1 AT3G56530 29.560 159 102 7 4 161 51 200 1.62e-13 69.7
MS.gene03868.t1 AT3G10490 41.026 78 43 2 83 160 2 76 1.46e-12 67.0
MS.gene03868.t1 AT3G10490 41.026 78 43 2 83 160 2 76 1.46e-12 67.0
MS.gene03868.t1 AT2G43000 38.835 103 58 3 81 182 11 109 1.51e-12 65.1
MS.gene03868.t1 AT2G18060 42.466 73 36 2 88 160 2 68 4.99e-12 65.1
MS.gene03868.t1 AT5G14000 31.061 132 81 5 5 134 15 138 2.28e-11 60.8
MS.gene03868.t1 AT5G14000 28.221 163 101 5 5 165 15 163 5.64e-11 60.8

Find 69 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGAAATTTCTCAATT+AGG 0.161327 4.1:+45356862 MS.gene03868:CDS
TCTTCGGATAACAAAGTTAT+TGG 0.171109 4.1:+45355551 MS.gene03868:CDS
CATTTGAAATTTCTCAATTA+GGG 0.213508 4.1:+45356863 MS.gene03868:CDS
CCCATTCCCATAGTGATTCT+TGG 0.233146 4.1:-45356990 None:intergenic
CTTCGGATAACAAAGTTATT+GGG 0.268350 4.1:+45355552 MS.gene03868:CDS
TTAACTCTTTCTCTCTCTAA+TGG 0.304088 4.1:-45356769 None:intergenic
TTCAATTCCAAGAATCACTA+TGG 0.318489 4.1:+45356983 MS.gene03868:CDS
AAAACCATGGTGTTCTATAA+AGG 0.328853 4.1:+45355581 MS.gene03868:CDS
TCCTGGTTATGTTTATTCTT+CGG 0.357166 4.1:+45355535 MS.gene03868:CDS
AATAGTAACAATGAAAATAA+TGG 0.367657 4.1:+45356952 MS.gene03868:CDS
GAACTACTGCTTGTGGGTAT+TGG 0.373733 4.1:+45355498 MS.gene03868:CDS
CCACAAGCAGTAGTTCTATT+AGG 0.380796 4.1:-45355491 None:intergenic
CAAGTGGAAGGAAAACAAAA+TGG 0.388513 4.1:+45355612 MS.gene03868:CDS
ACACCATTGATGTCAATAAC+TGG 0.391185 4.1:-45355136 None:intergenic
GCCAAACAAGTGCTATAGAT+AGG 0.402516 4.1:+45355107 MS.gene03868:CDS
AGAAAGAGTTAATCAATTAC+CGG 0.404391 4.1:+45356780 MS.gene03868:CDS
ACCATTGCTCTTTATCTTCG+CGG 0.411304 4.1:-45355424 None:intergenic
CCCTATCTATAGCACTTGTT+TGG 0.413662 4.1:-45355108 None:intergenic
ATTCCAGTTATTGACATCAA+TGG 0.418660 4.1:+45355133 MS.gene03868:CDS
TGTCGAGTGTATGTAATATC+AGG 0.421062 4.1:+45356721 MS.gene03868:CDS
CTTGCTTCTCTCTCTTGACC+TGG 0.421832 4.1:-45355458 None:intergenic
GAGATTGATCAAAATCCATT+TGG 0.424069 4.1:+45356808 MS.gene03868:CDS
TGTGGGTATTGGAAGGCAAC+AGG 0.456765 4.1:+45355509 MS.gene03868:CDS
TATCTAAATAATAAATTACA+AGG 0.468522 4.1:+45355085 MS.gene03868:CDS
TGGTGCCACATCTACTCATC+AGG 0.471854 4.1:+45356828 MS.gene03868:CDS
TACTTACTTGGGAGGTTCCA+TGG 0.472632 4.1:-45355163 None:intergenic
TCCAAGAATCACTATGGGAA+TGG 0.475257 4.1:+45356989 MS.gene03868:CDS
GAGGTTCAAATAGCACAAAT+TGG 0.477207 4.1:+45356923 MS.gene03868:CDS
CCAAGAATCACTATGGGAAT+GGG 0.486561 4.1:+45356990 MS.gene03868:CDS
CTAACAAGCTCTTCTTCAGT+TGG 0.487944 4.1:-45355058 None:intergenic
TAACAAGCTCTTCTTCAGTT+GGG 0.488303 4.1:-45355057 None:intergenic
TGGAAGGCAACAGGTTCTCC+TGG 0.494297 4.1:+45355518 MS.gene03868:CDS
CTAATAGAACTACTGCTTGT+GGG 0.501976 4.1:+45355492 MS.gene03868:CDS
TGAGTAGATGTGGCACCAAA+TGG 0.509329 4.1:-45356823 None:intergenic
CATATGCCACTAGAGGTTGT+AGG 0.515500 4.1:+45356901 MS.gene03868:CDS
CTAGTGGCATATGATTACTT+TGG 0.515830 4.1:-45356891 None:intergenic
AGGTCAAGAGAGAGAAGCAA+GGG 0.520943 4.1:+45355460 MS.gene03868:CDS
GAGGTGTGGCAGTGTTGGAT+TGG 0.521829 4.1:-45355670 None:intergenic
GGATTGGTTAGATACTTGAA+TGG 0.527741 4.1:-45355654 None:intergenic
CCAAACAAGTGCTATAGATA+GGG 0.540158 4.1:+45355108 MS.gene03868:CDS
AAGAGAGAGAAGCAAGGGGA+GGG 0.540485 4.1:+45355465 MS.gene03868:CDS
TATTAATGTACTTACTTGGG+AGG 0.544087 4.1:-45355171 None:intergenic
TACCTGAGGTGTGGCAGTGT+TGG 0.546731 4.1:-45355675 None:intergenic
ATCCAACACTGCCACACCTC+AGG 0.560321 4.1:+45355673 MS.gene03868:CDS
TTCGGATAACAAAGTTATTG+GGG 0.568678 4.1:+45355553 MS.gene03868:CDS
TTTGAAATTTCTCAATTAGG+GGG 0.569799 4.1:+45356865 MS.gene03868:CDS
CAATGAAAATAATGGTGATG+AGG 0.574582 4.1:+45356960 MS.gene03868:CDS
CAAGAGAGAGAAGCAAGGGG+AGG 0.575212 4.1:+45355464 MS.gene03868:CDS
AAGGAAAAGCTCCAAGTGGA+AGG 0.577529 4.1:+45355600 MS.gene03868:CDS
CCTAATAGAACTACTGCTTG+TGG 0.583756 4.1:+45355491 MS.gene03868:CDS
ATGGAAGATACCTTCCCACC+TGG 0.589454 4.1:+45355022 MS.gene03868:CDS
ATTTGAAATTTCTCAATTAG+GGG 0.591470 4.1:+45356864 MS.gene03868:CDS
TCCGAAGAATAAACATAACC+AGG 0.594367 4.1:-45355536 None:intergenic
TACTGCTTGTGGGTATTGGA+AGG 0.594408 4.1:+45355502 MS.gene03868:CDS
TCAATTCCAAGAATCACTAT+GGG 0.601158 4.1:+45356984 MS.gene03868:CDS
GAAACGAAAACCAGGTGGGA+AGG 0.608858 4.1:-45355032 None:intergenic
GCCGCGAAGATAAAGAGCAA+TGG 0.609204 4.1:+45355423 MS.gene03868:CDS
CAGGTCAAGAGAGAGAAGCA+AGG 0.633366 4.1:+45355459 MS.gene03868:CDS
AAGTAATCATATGCCACTAG+AGG 0.633670 4.1:+45356894 MS.gene03868:CDS
GAACCTCCTACAACCTCTAG+TGG 0.635358 4.1:-45356907 None:intergenic
ACATCAATGGTGTAGAACCA+TGG 0.640791 4.1:+45355146 MS.gene03868:CDS
GTTGGGAAGAAACGAAAACC+AGG 0.640908 4.1:-45355040 None:intergenic
TATAAAGGAAAAGCTCCAAG+TGG 0.670306 4.1:+45355596 MS.gene03868:CDS
ATGCCACTAGAGGTTGTAGG+AGG 0.675101 4.1:+45356904 MS.gene03868:CDS
TGCATCCTGATGAGTAGATG+TGG 0.677636 4.1:-45356833 None:intergenic
GGTCAAGAGAGAGAAGCAAG+GGG 0.681277 4.1:+45355461 MS.gene03868:CDS
GGGAAGAAACGAAAACCAGG+TGG 0.697514 4.1:-45355037 None:intergenic
GGAAGAAACGAAAACCAGGT+GGG 0.702147 4.1:-45355036 None:intergenic
TGCAATATATACCTGAGGTG+TGG 0.718087 4.1:-45355684 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAAATTAACATATA+TGG + chr4.1:45355822-45355841 MS.gene03868:intron 10.0%
!! TATCTAAATAATAAATTACA+AGG + chr4.1:45355085-45355104 MS.gene03868:CDS 10.0%
!!! AAAATTTTCAAAAACAAAAA+AGG + chr4.1:45356458-45356477 MS.gene03868:intron 10.0%
!!! AAATCTTATTTAATCAATTA+TGG - chr4.1:45356368-45356387 None:intergenic 10.0%
!!! TATACTATTGTTTTATTTAT+AGG - chr4.1:45355882-45355901 None:intergenic 10.0%
!! AATAGTAACAATGAAAATAA+TGG + chr4.1:45356952-45356971 MS.gene03868:CDS 15.0%
!! TAATAATTAAGGTATACAAT+AGG + chr4.1:45355732-45355751 MS.gene03868:intron 15.0%
!! TTATATTAATGTACTTACTT+GGG - chr4.1:45355177-45355196 None:intergenic 15.0%
!! TTTATATTAATGTACTTACT+TGG - chr4.1:45355178-45355197 None:intergenic 15.0%
!!! TAAATTTAGCTTTTGTTTTT+TGG + chr4.1:45356667-45356686 MS.gene03868:intron 15.0%
!!! TTGTTGTTTTTTTAGTTTAA+AGG - chr4.1:45356585-45356604 None:intergenic 15.0%
!! AATCATCAAACTATGTAAAT+CGG - chr4.1:45355363-45355382 None:intergenic 20.0%
!! TAAGAATTTAGATTGCATAT+GGG + chr4.1:45356187-45356206 MS.gene03868:intron 20.0%
!! TTAAGAATTTAGATTGCATA+TGG + chr4.1:45356186-45356205 MS.gene03868:intron 20.0%
!! TTGTCTATAAAAGAAAGAAA+TGG - chr4.1:45355230-45355249 None:intergenic 20.0%
!!! ATTTGAAATTTCTCAATTAG+GGG + chr4.1:45356864-45356883 MS.gene03868:CDS 20.0%
!!! CATTTGAAATTTCTCAATTA+GGG + chr4.1:45356863-45356882 MS.gene03868:CDS 20.0%
!!! CTTGTATGAATTTCATTTTA+AGG - chr4.1:45355850-45355869 None:intergenic 20.0%
!!! GTTTAAATTTTTTGCATGTT+AGG + chr4.1:45356120-45356139 MS.gene03868:intron 20.0%
!!! TAAAAAAAGTATTAACCATG+AGG - chr4.1:45355296-45355315 None:intergenic 20.0%
!!! TCATTTGAAATTTCTCAATT+AGG + chr4.1:45356862-45356881 MS.gene03868:CDS 20.0%
!!! TTTATAGACAAACTTTTACT+AGG + chr4.1:45355239-45355258 MS.gene03868:intron 20.0%
! ACATAGTATGAATGACATTT+AGG + chr4.1:45356389-45356408 MS.gene03868:intron 25.0%
! AGAAAGAGTTAATCAATTAC+CGG + chr4.1:45356780-45356799 MS.gene03868:CDS 25.0%
! CATAGTATGAATGACATTTA+GGG + chr4.1:45356390-45356409 MS.gene03868:intron 25.0%
! TCGTCATGATGTAATAATTA+AGG + chr4.1:45355721-45355740 MS.gene03868:intron 25.0%
!! TATATTGCTTTAGTGTTGAA+GGG + chr4.1:45355945-45355964 MS.gene03868:intron 25.0%
!! TTTGAAATTTCTCAATTAGG+GGG + chr4.1:45356865-45356884 MS.gene03868:CDS 25.0%
!! TTTTATGACCAACAAATACT+TGG + chr4.1:45355905-45355924 MS.gene03868:intron 25.0%
!! TTTTGATCAATCTCATTAAC+CGG - chr4.1:45356802-45356821 None:intergenic 25.0%
!!! CGAGATTGTATTAGTTTTAA+GGG + chr4.1:45356086-45356105 MS.gene03868:intron 25.0%
!!! TCGAGATTGTATTAGTTTTA+AGG + chr4.1:45356085-45356104 MS.gene03868:intron 25.0%
!!! TTTTTGGTGTTTTATAGTTG+AGG + chr4.1:45356683-45356702 MS.gene03868:intron 25.0%
AAAACCATGGTGTTCTATAA+AGG + chr4.1:45355581-45355600 MS.gene03868:CDS 30.0%
AAAAGGAAAAAACAGTTGAG+AGG + chr4.1:45356475-45356494 MS.gene03868:intron 30.0%
AAGACTGTAGAAATACAAAG+CGG - chr4.1:45356224-45356243 None:intergenic 30.0%
AATAATAGAGCCAACATAGT+TGG - chr4.1:45356066-45356085 None:intergenic 30.0%
AATGATGCAATATATACCTG+AGG - chr4.1:45355692-45355711 None:intergenic 30.0%
ATTCCAGTTATTGACATCAA+TGG + chr4.1:45355133-45355152 MS.gene03868:CDS 30.0%
CAATTTCAATAACCAAAGTC+TGG - chr4.1:45356263-45356282 None:intergenic 30.0%
CTTCGGATAACAAAGTTATT+GGG + chr4.1:45355552-45355571 MS.gene03868:CDS 30.0%
GAGATTGATCAAAATCCATT+TGG + chr4.1:45356808-45356827 MS.gene03868:CDS 30.0%
TATTAATGTACTTACTTGGG+AGG - chr4.1:45355174-45355193 None:intergenic 30.0%
TCAATTCCAAGAATCACTAT+GGG + chr4.1:45356984-45357003 MS.gene03868:CDS 30.0%
TCCTGGTTATGTTTATTCTT+CGG + chr4.1:45355535-45355554 MS.gene03868:CDS 30.0%
TCTTCGGATAACAAAGTTAT+TGG + chr4.1:45355551-45355570 MS.gene03868:CDS 30.0%
TTAACTCTTTCTCTCTCTAA+TGG - chr4.1:45356772-45356791 None:intergenic 30.0%
TTCAATTCCAAGAATCACTA+TGG + chr4.1:45356983-45357002 MS.gene03868:CDS 30.0%
TTCGGATAACAAAGTTATTG+GGG + chr4.1:45355553-45355572 MS.gene03868:CDS 30.0%
! CAATGAAAATAATGGTGATG+AGG + chr4.1:45356960-45356979 MS.gene03868:CDS 30.0%
! CTTTTGATCCAAGTATTTGT+TGG - chr4.1:45355916-45355935 None:intergenic 30.0%
! GACAAACTTTTACTAGGTTA+TGG + chr4.1:45355245-45355264 MS.gene03868:intron 30.0%
! GTATATTGCTTTAGTGTTGA+AGG + chr4.1:45355944-45355963 MS.gene03868:intron 30.0%
! TTTTCCTTTATAGAACACCA+TGG - chr4.1:45355588-45355607 None:intergenic 30.0%
AAGTAATCATATGCCACTAG+AGG + chr4.1:45356894-45356913 MS.gene03868:CDS 35.0%
ACACCATTGATGTCAATAAC+TGG - chr4.1:45355139-45355158 None:intergenic 35.0%
AGAATCAGATGCTTCTAATG+TGG + chr4.1:45356010-45356029 MS.gene03868:intron 35.0%
CAACAATCTTCCAACTATGT+TGG + chr4.1:45356053-45356072 MS.gene03868:intron 35.0%
CAACATAGTTGGAAGATTGT+TGG - chr4.1:45356055-45356074 None:intergenic 35.0%
CAAGTGGAAGGAAAACAAAA+TGG + chr4.1:45355612-45355631 MS.gene03868:CDS 35.0%
CCAAACAAGTGCTATAGATA+GGG + chr4.1:45355108-45355127 MS.gene03868:CDS 35.0%
CTAATAGAACTACTGCTTGT+GGG + chr4.1:45355492-45355511 MS.gene03868:CDS 35.0%
CTAGTGGCATATGATTACTT+TGG - chr4.1:45356894-45356913 None:intergenic 35.0%
GAGGTTCAAATAGCACAAAT+TGG + chr4.1:45356923-45356942 MS.gene03868:CDS 35.0%
TAAATAATGAGCAGCTTGGT+TGG - chr4.1:45356153-45356172 None:intergenic 35.0%
TAACAAGCTCTTCTTCAGTT+GGG - chr4.1:45355060-45355079 None:intergenic 35.0%
TAGCTAAATAATGAGCAGCT+TGG - chr4.1:45356157-45356176 None:intergenic 35.0%
TATAAAGGAAAAGCTCCAAG+TGG + chr4.1:45355596-45355615 MS.gene03868:CDS 35.0%
TATTGGGGTGAAAAAAACCA+TGG + chr4.1:45355568-45355587 MS.gene03868:CDS 35.0%
TCCGAAGAATAAACATAACC+AGG - chr4.1:45355539-45355558 None:intergenic 35.0%
TGTCGAGTGTATGTAATATC+AGG + chr4.1:45356721-45356740 MS.gene03868:CDS 35.0%
! CAATGGTTTTTCTTTTCACC+AGG + chr4.1:45355440-45355459 MS.gene03868:CDS 35.0%
! GAGGAGTTTTCAAATCAAGT+AGG + chr4.1:45356494-45356513 MS.gene03868:intron 35.0%
! GCTTTGTATTTCTACAGTCT+TGG + chr4.1:45356223-45356242 MS.gene03868:intron 35.0%
!! GGATTGGTTAGATACTTGAA+TGG - chr4.1:45355657-45355676 None:intergenic 35.0%
!! GGGACAGTGAACATTTTAAT+TGG + chr4.1:45357010-45357029 MS.gene03868:CDS 35.0%
!! TTTGATTTGTTGCCAGACTT+TGG + chr4.1:45356248-45356267 MS.gene03868:intron 35.0%
!!! CATTTTGTTTTCCTTCCACT+TGG - chr4.1:45355614-45355633 None:intergenic 35.0%
ACATCAATGGTGTAGAACCA+TGG + chr4.1:45355146-45355165 MS.gene03868:CDS 40.0%
ACCATTGCTCTTTATCTTCG+CGG - chr4.1:45355427-45355446 None:intergenic 40.0%
CCAAGAATCACTATGGGAAT+GGG + chr4.1:45356990-45357009 MS.gene03868:CDS 40.0%
CCCTATCTATAGCACTTGTT+TGG - chr4.1:45355111-45355130 None:intergenic 40.0%
CCTAATAGAACTACTGCTTG+TGG + chr4.1:45355491-45355510 MS.gene03868:CDS 40.0%
CTAACAAGCTCTTCTTCAGT+TGG - chr4.1:45355061-45355080 None:intergenic 40.0%
GCCAAACAAGTGCTATAGAT+AGG + chr4.1:45355107-45355126 MS.gene03868:CDS 40.0%
TATGTTCCAAGCAGACAACT+CGG - chr4.1:45355337-45355356 None:intergenic 40.0%
TCCAAGAATCACTATGGGAA+TGG + chr4.1:45356989-45357008 MS.gene03868:CDS 40.0%
TGCAATATATACCTGAGGTG+TGG - chr4.1:45355687-45355706 None:intergenic 40.0%
! CCACAAGCAGTAGTTCTATT+AGG - chr4.1:45355494-45355513 None:intergenic 40.0%
! TGCTTTAGTGTTGAAGGGTT+TGG + chr4.1:45355950-45355969 MS.gene03868:intron 40.0%
!! ATGTGTTTTTGCAGCTCTTG+CGG + chr4.1:45355391-45355410 MS.gene03868:intron 40.0%
AAGGAAAAGCTCCAAGTGGA+AGG + chr4.1:45355600-45355619 MS.gene03868:CDS 45.0%
AGGTCAAGAGAGAGAAGCAA+GGG + chr4.1:45355460-45355479 MS.gene03868:CDS 45.0%
CATATGCCACTAGAGGTTGT+AGG + chr4.1:45356901-45356920 MS.gene03868:CDS 45.0%
CCCATTCCCATAGTGATTCT+TGG - chr4.1:45356993-45357012 None:intergenic 45.0%
GAACTACTGCTTGTGGGTAT+TGG + chr4.1:45355498-45355517 MS.gene03868:CDS 45.0%
GGAAGAAACGAAAACCAGGT+GGG - chr4.1:45355039-45355058 None:intergenic 45.0%
GTTGGGAAGAAACGAAAACC+AGG - chr4.1:45355043-45355062 None:intergenic 45.0%
TACTTACTTGGGAGGTTCCA+TGG - chr4.1:45355166-45355185 None:intergenic 45.0%
TGAGTAGATGTGGCACCAAA+TGG - chr4.1:45356826-45356845 None:intergenic 45.0%
TGCATCCTGATGAGTAGATG+TGG - chr4.1:45356836-45356855 None:intergenic 45.0%
!! AGACAACTCGGTTGATGAAC+GGG - chr4.1:45355325-45355344 None:intergenic 45.0%
!! CAGACAACTCGGTTGATGAA+CGG - chr4.1:45355326-45355345 None:intergenic 45.0%
!! TACTGCTTGTGGGTATTGGA+AGG + chr4.1:45355502-45355521 MS.gene03868:CDS 45.0%
!! TGTGTTTTTGCAGCTCTTGC+GGG + chr4.1:45355392-45355411 MS.gene03868:intron 45.0%
AAGAGAGAGAAGCAAGGGGA+GGG + chr4.1:45355465-45355484 MS.gene03868:CDS 50.0%
ATGCCACTAGAGGTTGTAGG+AGG + chr4.1:45356904-45356923 MS.gene03868:CDS 50.0%
ATGGAAGATACCTTCCCACC+TGG + chr4.1:45355022-45355041 MS.gene03868:CDS 50.0%
CAGGTCAAGAGAGAGAAGCA+AGG + chr4.1:45355459-45355478 MS.gene03868:CDS 50.0%
CATCAACCGAGTTGTCTGCT+TGG + chr4.1:45355328-45355347 MS.gene03868:intron 50.0%
CTTGCTTCTCTCTCTTGACC+TGG - chr4.1:45355461-45355480 None:intergenic 50.0%
GAAACGAAAACCAGGTGGGA+AGG - chr4.1:45355035-45355054 None:intergenic 50.0%
GAACCTCCTACAACCTCTAG+TGG - chr4.1:45356910-45356929 None:intergenic 50.0%
GAGTTCGAACTCTGACCTCA+TGG + chr4.1:45355278-45355297 MS.gene03868:intron 50.0%
GCCGCGAAGATAAAGAGCAA+TGG + chr4.1:45355423-45355442 MS.gene03868:CDS 50.0%
GGGAAGAAACGAAAACCAGG+TGG - chr4.1:45355040-45355059 None:intergenic 50.0%
GGTCAAGAGAGAGAAGCAAG+GGG + chr4.1:45355461-45355480 MS.gene03868:CDS 50.0%
TGAGGTCAGAGTTCGAACTC+TGG - chr4.1:45355278-45355297 None:intergenic 50.0%
!! GACAACTCGGTTGATGAACG+GGG - chr4.1:45355324-45355343 None:intergenic 50.0%
!! TGGTGCCACATCTACTCATC+AGG + chr4.1:45356828-45356847 MS.gene03868:CDS 50.0%
!! TGTGGGTATTGGAAGGCAAC+AGG + chr4.1:45355509-45355528 MS.gene03868:CDS 50.0%
ATCCAACACTGCCACACCTC+AGG + chr4.1:45355673-45355692 MS.gene03868:CDS 55.0%
CAAGAGAGAGAAGCAAGGGG+AGG + chr4.1:45355464-45355483 MS.gene03868:CDS 55.0%
TACCTGAGGTGTGGCAGTGT+TGG - chr4.1:45355678-45355697 None:intergenic 55.0%
TGGAAGGCAACAGGTTCTCC+TGG + chr4.1:45355518-45355537 MS.gene03868:CDS 55.0%
! GAGGTGTGGCAGTGTTGGAT+TGG - chr4.1:45355673-45355692 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 45355022 45357038 45355022 ID=MS.gene03868
chr4.1 mRNA 45355022 45357038 45355022 ID=MS.gene03868.t1;Parent=MS.gene03868
chr4.1 exon 45355022 45355178 45355022 ID=MS.gene03868.t1.exon1;Parent=MS.gene03868.t1
chr4.1 CDS 45355022 45355178 45355022 ID=cds.MS.gene03868.t1;Parent=MS.gene03868.t1
chr4.1 exon 45355405 45355694 45355405 ID=MS.gene03868.t1.exon2;Parent=MS.gene03868.t1
chr4.1 CDS 45355405 45355694 45355405 ID=cds.MS.gene03868.t1;Parent=MS.gene03868.t1
chr4.1 exon 45356700 45357038 45356700 ID=MS.gene03868.t1.exon3;Parent=MS.gene03868.t1
chr4.1 CDS 45356700 45357038 45356700 ID=cds.MS.gene03868.t1;Parent=MS.gene03868.t1
Gene Sequence

>MS.gene03868

ATGGAAGATACCTTCCCACCTGGTTTTCGTTTCTTCCCAACTGAAGAAGAGCTTGTTAGCTTTTATCTAAATAATAAATTACAAGGCCAAACAAGTGCTATAGATAGGGTTATTCCAGTTATTGACATCAATGGTGTAGAACCATGGAACCTCCCAAGTAAGTACATTAATATAAACTTTCATAACATTAATTCATTTGCACTTTCCATTTCTTTCTTTTATAGACAAACTTTTACTAGGTTATGGTTTATATCCAGAGTTCGAACTCTGACCTCATGGTTAATACTTTTTTTATATTTCCCCGTTCATCAACCGAGTTGTCTGCTTGGAACATATTACCGATTTACATAGTTTGATGATTTTGTCGCAATGTGTTTTTGCAGCTCTTGCGGGAGAGCTTTGCCGCGAAGATAAAGAGCAATGGTTTTTCTTTTCACCAGGTCAAGAGAGAGAAGCAAGGGGAGGGAGACCTAATAGAACTACTGCTTGTGGGTATTGGAAGGCAACAGGTTCTCCTGGTTATGTTTATTCTTCGGATAACAAAGTTATTGGGGTGAAAAAAACCATGGTGTTCTATAAAGGAAAAGCTCCAAGTGGAAGGAAAACAAAATGGAAGATGAATGAATACAGAGCCATTCAAGTATCTAACCAATCCAACACTGCCACACCTCAGGTATATATTGCATCATTATATCATCATCGTCATGATGTAATAATTAAGGTATACAATAGGTGCAAGTTGATAGAAAATAAATATTTTTTTGTTACAATAAAAATAAATTAAGTTTAGCAAATACGTAAAAATGAAAATTAACATATATGGATCCTTAAAATGAAATTCATACAAGTAACACTTGCCTATAAATAAAACAATAGTATAGTATTTTATGACCAACAAATACTTGGATCAAAAGTACAAAGTGTATATTGCTTTAGTGTTGAAGGGTTTGGAATTTGCAAAAGACATGTCTTTTCTGAATCTTATCGCAGAATCAGATGCTTCTAATGTGGTTTTAGCGTTGAATGATCACCAACAATCTTCCAACTATGTTGGCTCTATTATTCGAGATTGTATTAGTTTTAAGGGTAGTTTTCGTAGTTTAAATTTTTTGCATGTTAGGCGTGAAGCCAACCAAGCTGCTCATTATTTAGCTAAATATGCTCTTAAGAATTTAGATTGCATATGGGTAGAAGAAACTCCGCTTTGTATTTCTACAGTCTTGGCATTTGATTTGTTGCCAGACTTTGGTTATTGAAATTGTCTTTAACGTCAAAAAAAAAAGTACAAAGTGTATATTGCTTTAGTGTATTTTTAAATTTATAAATATATCAGAGCAAAATAGCCATAATTGATTAAATAAGATTTGACATAGTATGAATGACATTTAGGGTAAGTATTTTTCTACTTTTTCTTCTTAAAATTTATTAGATATATGAAAATTTTCAAAAACAAAAAAGGAAAAAACAGTTGAGAGGAGTTTTCAAATCAAGTAGGAGATATTTTATAATTTTATCTATTTTTATTATTTGATTCAAATTTTACTATTCTATAAAAAGAATCCTTTAAACTAAAAAAACAACAAATGAACAAATAAATTTTAACTTTATTTCTAACAAATTTACTCTTTATTTCTATTTTTAGTTTTAAATTTAGCTTTTGTTTTTTGGTGTTTTATAGTTGAGGAGAGAATTCAGCTTGTGTCGAGTGTATGTAATATCAGGAAGCTTTCGAGCATTTGATAGACGTCCATTAGAGAGAGAAAGAGTTAATCAATTACCGGTTAATGAGATTGATCAAAATCCATTTGGTGCCACATCTACTCATCAGGATGCAACAAGTTCATTTGAAATTTCTCAATTAGGGGGACGCCAAAGTAATCATATGCCACTAGAGGTTGTAGGAGGTTCAAATAGCACAAATTGGCATGTAAATAGTAACAATGAAAATAATGGTGATGAGGTTCAATTCCAAGAATCACTATGGGAATGGGACAGTGAACATTTTAATTGGTCCTAA
Protein sequence

>MS.gene03868.t1

MEDTFPPGFRFFPTEEELVSFYLNNKLQGQTSAIDRVIPVIDINGVEPWNLPTLAGELCREDKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGKAPSGRKTKWKMNEYRAIQVSNQSNTATPQLRREFSLCRVYVISGSFRAFDRRPLERERVNQLPVNEIDQNPFGATSTHQDATSSFEISQLGGRQSNHMPLEVVGGSNSTNWHVNSNNENNGDEVQFQESLWEWDSEHFNWS