Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038713.t1 | XP_003609208.1 | 94.9 | 434 | 22 | 0 | 1 | 434 | 1 | 434 | 9.70E-214 | 752.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038713.t1 | Q9ZQ85 | 54.7 | 344 | 118 | 13 | 1 | 326 | 1 | 324 | 1.2e-76 | 288.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038713.t1 | G7JU63 | 94.9 | 434 | 22 | 0 | 1 | 434 | 1 | 434 | 7.0e-214 | 752.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene038713.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038713.t1 | MTR_4g113140 | 98.157 | 434 | 8 | 0 | 1 | 434 | 1 | 434 | 0.0 | 887 |
MS.gene038713.t1 | MTR_4g086835 | 38.649 | 370 | 171 | 12 | 4 | 328 | 6 | 364 | 2.40e-61 | 205 |
MS.gene038713.t1 | MTR_4g086835 | 38.649 | 370 | 170 | 13 | 4 | 328 | 6 | 363 | 1.20e-59 | 200 |
MS.gene038713.t1 | MTR_5g054300 | 40.469 | 341 | 140 | 16 | 30 | 350 | 12 | 309 | 1.29e-51 | 177 |
MS.gene038713.t1 | MTR_1g093080 | 35.714 | 336 | 151 | 8 | 29 | 328 | 2 | 308 | 1.84e-50 | 175 |
MS.gene038713.t1 | MTR_1g093080 | 34.256 | 289 | 129 | 6 | 29 | 285 | 2 | 261 | 5.72e-39 | 142 |
MS.gene038713.t1 | MTR_5g017980 | 34.539 | 304 | 146 | 8 | 6 | 305 | 10 | 264 | 1.49e-37 | 139 |
MS.gene038713.t1 | MTR_5g017980 | 34.539 | 304 | 145 | 9 | 6 | 305 | 10 | 263 | 5.69e-36 | 135 |
MS.gene038713.t1 | MTR_5g017980 | 34.211 | 304 | 145 | 8 | 6 | 305 | 10 | 262 | 2.15e-35 | 133 |
MS.gene038713.t1 | MTR_1g093080 | 29.924 | 264 | 120 | 8 | 29 | 258 | 2 | 234 | 2.24e-22 | 96.3 |
MS.gene038713.t1 | MTR_1g080330 | 50.000 | 82 | 39 | 1 | 226 | 307 | 166 | 245 | 2.21e-15 | 76.6 |
MS.gene038713.t1 | MTR_1g080330 | 48.235 | 85 | 42 | 1 | 226 | 310 | 166 | 248 | 4.24e-15 | 77.0 |
MS.gene038713.t1 | MTR_7g098250 | 47.727 | 88 | 44 | 1 | 226 | 313 | 253 | 338 | 8.72e-15 | 76.6 |
MS.gene038713.t1 | MTR_2g450070 | 37.383 | 107 | 59 | 3 | 232 | 331 | 210 | 315 | 1.11e-14 | 76.6 |
MS.gene038713.t1 | MTR_2g450070 | 37.383 | 107 | 59 | 3 | 232 | 331 | 210 | 315 | 1.27e-14 | 76.6 |
MS.gene038713.t1 | MTR_1g053830 | 44.286 | 70 | 39 | 0 | 228 | 297 | 11 | 80 | 1.34e-14 | 69.7 |
MS.gene038713.t1 | MTR_4g131580 | 49.296 | 71 | 35 | 1 | 232 | 302 | 197 | 266 | 4.74e-14 | 74.7 |
MS.gene038713.t1 | MTR_7g089010 | 52.381 | 63 | 29 | 1 | 231 | 293 | 87 | 148 | 1.75e-13 | 71.2 |
MS.gene038713.t1 | MTR_1g053835 | 43.478 | 92 | 47 | 1 | 211 | 297 | 229 | 320 | 1.99e-13 | 72.0 |
MS.gene038713.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 3.36e-13 | 70.5 |
MS.gene038713.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 5.92e-13 | 70.1 |
MS.gene038713.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 108 | 174 | 6.37e-13 | 70.9 |
MS.gene038713.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 212 | 278 | 6.52e-13 | 71.2 |
MS.gene038713.t1 | MTR_4g121020 | 52.941 | 68 | 31 | 1 | 232 | 299 | 212 | 278 | 6.76e-13 | 71.2 |
MS.gene038713.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 8.22e-13 | 69.7 |
MS.gene038713.t1 | MTR_1g013170 | 54.839 | 62 | 27 | 1 | 234 | 295 | 190 | 250 | 8.29e-13 | 70.5 |
MS.gene038713.t1 | MTR_7g115530 | 56.667 | 60 | 26 | 0 | 235 | 294 | 218 | 277 | 1.06e-12 | 70.1 |
MS.gene038713.t1 | MTR_5g014040 | 52.308 | 65 | 29 | 2 | 230 | 293 | 305 | 368 | 1.46e-12 | 69.7 |
MS.gene038713.t1 | MTR_4g064730 | 40.404 | 99 | 52 | 3 | 218 | 316 | 119 | 210 | 1.47e-12 | 68.6 |
MS.gene038713.t1 | MTR_2g023580 | 61.538 | 52 | 20 | 0 | 237 | 288 | 57 | 108 | 1.70e-12 | 67.4 |
MS.gene038713.t1 | MTR_5g041350 | 53.448 | 58 | 27 | 0 | 232 | 289 | 12 | 69 | 1.72e-12 | 68.9 |
MS.gene038713.t1 | MTR_2g086450 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 3.03e-12 | 68.2 |
MS.gene038713.t1 | MTR_7g088070 | 52.239 | 67 | 31 | 1 | 235 | 300 | 50 | 116 | 3.05e-12 | 67.0 |
MS.gene038713.t1 | MTR_2g034960 | 43.333 | 90 | 44 | 2 | 232 | 315 | 208 | 296 | 3.31e-12 | 68.9 |
MS.gene038713.t1 | MTR_4g131570 | 46.479 | 71 | 37 | 1 | 232 | 302 | 200 | 269 | 4.69e-12 | 68.2 |
MS.gene038713.t1 | MTR_7g088070 | 55.000 | 60 | 27 | 0 | 235 | 294 | 50 | 109 | 5.77e-12 | 66.2 |
MS.gene038713.t1 | MTR_6g032990 | 44.444 | 81 | 40 | 2 | 232 | 308 | 39 | 118 | 5.83e-12 | 67.4 |
MS.gene038713.t1 | MTR_0223s0040 | 61.224 | 49 | 19 | 0 | 240 | 288 | 23 | 71 | 7.78e-12 | 66.2 |
MS.gene038713.t1 | MTR_2g027860 | 50.746 | 67 | 33 | 0 | 235 | 301 | 49 | 115 | 9.67e-12 | 66.2 |
MS.gene038713.t1 | MTR_1g032570 | 46.753 | 77 | 38 | 2 | 227 | 301 | 192 | 267 | 1.08e-11 | 67.4 |
MS.gene038713.t1 | MTR_1g032570 | 46.753 | 77 | 38 | 2 | 227 | 301 | 123 | 198 | 1.17e-11 | 67.0 |
MS.gene038713.t1 | MTR_1g112370 | 59.184 | 49 | 20 | 0 | 240 | 288 | 27 | 75 | 1.30e-11 | 65.9 |
MS.gene038713.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 309 | 374 | 1.40e-11 | 66.6 |
MS.gene038713.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 329 | 394 | 1.46e-11 | 66.6 |
MS.gene038713.t1 | MTR_3g064840 | 46.479 | 71 | 38 | 0 | 231 | 301 | 270 | 340 | 1.52e-11 | 66.2 |
MS.gene038713.t1 | MTR_5g027440 | 54.098 | 61 | 26 | 1 | 235 | 293 | 25 | 85 | 1.55e-11 | 65.1 |
MS.gene038713.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 309 | 374 | 1.66e-11 | 66.6 |
MS.gene038713.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 329 | 394 | 1.68e-11 | 66.6 |
MS.gene038713.t1 | MTR_8g066310 | 46.575 | 73 | 39 | 0 | 229 | 301 | 167 | 239 | 1.82e-11 | 65.5 |
MS.gene038713.t1 | MTR_4g098870 | 44.776 | 67 | 36 | 1 | 234 | 300 | 348 | 413 | 1.82e-11 | 66.6 |
MS.gene038713.t1 | MTR_4g078810 | 48.387 | 62 | 31 | 1 | 231 | 292 | 154 | 214 | 2.03e-11 | 65.9 |
MS.gene038713.t1 | MTR_7g069660 | 57.143 | 49 | 21 | 0 | 240 | 288 | 76 | 124 | 2.33e-11 | 65.5 |
MS.gene038713.t1 | MTR_6g071625 | 49.231 | 65 | 33 | 0 | 234 | 298 | 201 | 265 | 2.39e-11 | 65.5 |
MS.gene038713.t1 | MTR_1g090670 | 58.182 | 55 | 23 | 0 | 235 | 289 | 44 | 98 | 2.45e-11 | 64.7 |
MS.gene038713.t1 | MTR_2g027800 | 58.182 | 55 | 23 | 0 | 235 | 289 | 39 | 93 | 3.13e-11 | 64.3 |
MS.gene038713.t1 | MTR_3g106220 | 46.377 | 69 | 36 | 1 | 234 | 302 | 197 | 264 | 3.53e-11 | 65.5 |
MS.gene038713.t1 | MTR_2g027800 | 58.182 | 55 | 23 | 0 | 235 | 289 | 39 | 93 | 3.89e-11 | 64.3 |
MS.gene038713.t1 | MTR_7g093030 | 50.847 | 59 | 29 | 0 | 230 | 288 | 207 | 265 | 4.29e-11 | 63.9 |
MS.gene038713.t1 | MTR_4g021790 | 45.588 | 68 | 36 | 1 | 234 | 301 | 167 | 233 | 4.52e-11 | 63.5 |
MS.gene038713.t1 | MTR_8g079940 | 53.333 | 60 | 27 | 1 | 234 | 293 | 208 | 266 | 4.81e-11 | 65.1 |
MS.gene038713.t1 | MTR_1g021520 | 38.095 | 105 | 60 | 1 | 227 | 331 | 118 | 217 | 4.82e-11 | 63.9 |
MS.gene038713.t1 | MTR_7g115530 | 59.615 | 52 | 21 | 0 | 235 | 286 | 218 | 269 | 6.37e-11 | 63.2 |
MS.gene038713.t1 | MTR_7g117705 | 52.542 | 59 | 27 | 1 | 234 | 292 | 190 | 247 | 8.66e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038713.t1 | AT2G03500 | 50.959 | 469 | 158 | 20 | 1 | 434 | 1 | 432 | 4.48e-118 | 352 |
MS.gene038713.t1 | AT1G68670 | 37.535 | 357 | 157 | 12 | 32 | 351 | 13 | 340 | 3.77e-61 | 202 |
MS.gene038713.t1 | AT1G25550 | 39.394 | 330 | 132 | 13 | 18 | 316 | 2 | 294 | 4.65e-55 | 186 |
MS.gene038713.t1 | AT3G25790 | 33.333 | 357 | 141 | 8 | 19 | 333 | 1 | 302 | 7.68e-45 | 160 |
MS.gene038713.t1 | AT1G25550 | 37.966 | 295 | 119 | 11 | 18 | 285 | 2 | 259 | 8.15e-43 | 152 |
MS.gene038713.t1 | AT4G37180 | 35.473 | 296 | 139 | 8 | 7 | 293 | 16 | 268 | 2.46e-39 | 145 |
MS.gene038713.t1 | AT4G37180 | 34.797 | 296 | 148 | 8 | 7 | 293 | 16 | 275 | 5.08e-37 | 139 |
MS.gene038713.t1 | AT4G37180 | 34.722 | 288 | 136 | 8 | 7 | 285 | 16 | 260 | 1.01e-34 | 130 |
MS.gene038713.t1 | AT1G13300 | 71.765 | 85 | 22 | 1 | 234 | 316 | 180 | 264 | 6.72e-34 | 130 |
MS.gene038713.t1 | AT1G49560 | 64.706 | 85 | 25 | 2 | 231 | 314 | 188 | 268 | 1.22e-27 | 112 |
MS.gene038713.t1 | AT3G25790 | 49.533 | 107 | 52 | 1 | 181 | 285 | 140 | 246 | 1.28e-20 | 91.3 |
MS.gene038713.t1 | AT3G25790 | 28.409 | 176 | 76 | 6 | 19 | 146 | 1 | 174 | 3.82e-11 | 63.5 |
MS.gene038713.t1 | AT1G49560 | 76.364 | 55 | 13 | 0 | 231 | 285 | 188 | 242 | 1.56e-20 | 91.3 |
MS.gene038713.t1 | AT4G28610 | 53.333 | 90 | 41 | 1 | 224 | 313 | 214 | 302 | 8.30e-19 | 88.6 |
MS.gene038713.t1 | AT5G05090 | 34.932 | 146 | 75 | 4 | 224 | 366 | 70 | 198 | 9.13e-16 | 77.4 |
MS.gene038713.t1 | AT2G20400 | 51.899 | 79 | 37 | 1 | 235 | 313 | 231 | 308 | 2.16e-14 | 75.1 |
MS.gene038713.t1 | AT2G20400 | 51.899 | 79 | 36 | 1 | 235 | 313 | 231 | 307 | 3.36e-14 | 74.3 |
MS.gene038713.t1 | AT3G46640 | 41.489 | 94 | 53 | 2 | 225 | 318 | 134 | 225 | 6.03e-14 | 72.8 |
MS.gene038713.t1 | AT3G46640 | 41.489 | 94 | 53 | 2 | 225 | 318 | 134 | 225 | 6.03e-14 | 72.8 |
MS.gene038713.t1 | AT2G40970 | 35.200 | 125 | 66 | 2 | 231 | 355 | 101 | 210 | 6.72e-14 | 71.6 |
MS.gene038713.t1 | AT3G46640 | 34.507 | 142 | 65 | 3 | 203 | 318 | 86 | 225 | 7.73e-14 | 72.8 |
MS.gene038713.t1 | AT3G10760 | 52.381 | 63 | 29 | 1 | 231 | 293 | 101 | 162 | 9.81e-14 | 72.4 |
MS.gene038713.t1 | AT5G59570 | 49.231 | 65 | 32 | 1 | 229 | 293 | 135 | 198 | 1.82e-13 | 71.2 |
MS.gene038713.t1 | AT5G59570 | 49.231 | 65 | 32 | 1 | 229 | 293 | 135 | 198 | 1.82e-13 | 71.2 |
MS.gene038713.t1 | AT2G20570 | 36.486 | 148 | 62 | 5 | 163 | 292 | 76 | 209 | 3.84e-13 | 71.2 |
MS.gene038713.t1 | AT2G06020 | 58.182 | 55 | 23 | 0 | 235 | 289 | 86 | 140 | 6.97e-13 | 69.3 |
MS.gene038713.t1 | AT3G04030 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 1.57e-12 | 69.3 |
MS.gene038713.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 211 | 299 | 1.60e-12 | 69.3 |
MS.gene038713.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 168 | 256 | 1.72e-12 | 68.9 |
MS.gene038713.t1 | AT5G29000 | 43.820 | 89 | 48 | 1 | 217 | 303 | 168 | 256 | 1.72e-12 | 68.9 |
MS.gene038713.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 1.81e-12 | 68.9 |
MS.gene038713.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 1.81e-12 | 68.9 |
MS.gene038713.t1 | AT3G04030 | 55.172 | 58 | 26 | 0 | 232 | 289 | 42 | 99 | 1.83e-12 | 68.9 |
MS.gene038713.t1 | AT2G02060 | 57.692 | 52 | 22 | 0 | 237 | 288 | 31 | 82 | 2.01e-12 | 67.4 |
MS.gene038713.t1 | AT2G02060 | 57.692 | 52 | 22 | 0 | 237 | 288 | 31 | 82 | 2.01e-12 | 67.4 |
MS.gene038713.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.07e-12 | 68.9 |
MS.gene038713.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.12e-12 | 68.9 |
MS.gene038713.t1 | AT5G18240 | 56.897 | 58 | 25 | 0 | 232 | 289 | 42 | 99 | 2.12e-12 | 68.9 |
MS.gene038713.t1 | AT5G58080 | 50.000 | 62 | 30 | 1 | 232 | 293 | 191 | 251 | 2.97e-12 | 68.9 |
MS.gene038713.t1 | AT2G38300 | 55.769 | 52 | 23 | 0 | 237 | 288 | 56 | 107 | 3.83e-12 | 67.8 |
MS.gene038713.t1 | AT5G29000 | 43.678 | 87 | 47 | 1 | 217 | 301 | 211 | 297 | 4.80e-12 | 67.0 |
MS.gene038713.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene038713.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene038713.t1 | AT3G13040 | 51.613 | 62 | 30 | 0 | 233 | 294 | 239 | 300 | 5.85e-12 | 67.8 |
MS.gene038713.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 134 | 197 | 6.05e-12 | 67.0 |
MS.gene038713.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 227 | 290 | 9.60e-12 | 67.0 |
MS.gene038713.t1 | AT2G01760 | 50.769 | 65 | 31 | 1 | 234 | 298 | 199 | 262 | 9.92e-12 | 66.6 |
MS.gene038713.t1 | AT2G01060 | 49.296 | 71 | 35 | 1 | 230 | 299 | 9 | 79 | 1.09e-11 | 65.9 |
MS.gene038713.t1 | AT5G45580 | 56.364 | 55 | 24 | 0 | 235 | 289 | 7 | 61 | 1.20e-11 | 65.5 |
MS.gene038713.t1 | AT5G45580 | 56.364 | 55 | 24 | 0 | 235 | 289 | 23 | 77 | 1.42e-11 | 65.5 |
MS.gene038713.t1 | AT1G14600 | 55.769 | 52 | 23 | 0 | 237 | 288 | 25 | 76 | 1.80e-11 | 64.7 |
MS.gene038713.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 166 | 224 | 1.88e-11 | 66.6 |
MS.gene038713.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 236 | 294 | 2.39e-11 | 66.2 |
MS.gene038713.t1 | AT3G16857 | 53.333 | 60 | 27 | 1 | 234 | 293 | 236 | 294 | 2.47e-11 | 66.2 |
MS.gene038713.t1 | AT3G04450 | 51.667 | 60 | 29 | 0 | 235 | 294 | 238 | 297 | 2.49e-11 | 65.1 |
MS.gene038713.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 238 | 309 | 2.96e-11 | 65.5 |
MS.gene038713.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 3.08e-11 | 64.3 |
MS.gene038713.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 198 | 269 | 3.12e-11 | 65.1 |
MS.gene038713.t1 | AT3G04450 | 45.833 | 72 | 39 | 0 | 235 | 306 | 198 | 269 | 3.12e-11 | 65.1 |
MS.gene038713.t1 | AT2G42660 | 46.250 | 80 | 41 | 1 | 225 | 302 | 38 | 117 | 4.28e-11 | 63.5 |
MS.gene038713.t1 | AT1G67710 | 47.887 | 71 | 37 | 0 | 223 | 293 | 116 | 186 | 6.87e-11 | 64.3 |
MS.gene038713.t1 | AT1G67710 | 47.887 | 71 | 37 | 0 | 223 | 293 | 107 | 177 | 7.22e-11 | 64.3 |
MS.gene038713.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 8.40e-11 | 63.9 |
MS.gene038713.t1 | AT5G06800 | 51.667 | 60 | 29 | 0 | 235 | 294 | 192 | 251 | 8.81e-11 | 63.9 |
MS.gene038713.t1 | AT1G32240 | 51.724 | 58 | 28 | 0 | 231 | 288 | 209 | 266 | 9.07e-11 | 63.5 |
MS.gene038713.t1 | AT1G32240 | 51.724 | 58 | 28 | 0 | 231 | 288 | 209 | 266 | 9.59e-11 | 63.5 |
MS.gene038713.t1 | AT5G16560 | 54.545 | 55 | 25 | 0 | 234 | 288 | 218 | 272 | 9.67e-11 | 63.9 |
MS.gene038713.t1 | AT5G42630 | 54.545 | 55 | 25 | 0 | 234 | 288 | 104 | 158 | 9.70e-11 | 62.0 |
Find 99 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAACTCCCTTATCTGTTT+TGG | 0.218983 | 8.4:+15513130 | None:intergenic |
AATGATAACAATAACAATAT+TGG | 0.280258 | 8.4:-15514028 | MS.gene038713:CDS |
TGGAGCCAAACAAGTGAATT+AGG | 0.287496 | 8.4:-15514085 | MS.gene038713:CDS |
TTGTTCCTAATTCACTTGTT+TGG | 0.309917 | 8.4:+15514080 | None:intergenic |
TTCTTGCTTTCCTATGAGTT+TGG | 0.321167 | 8.4:+15513756 | None:intergenic |
GGATGACAAGTGCACAATTA+TGG | 0.322662 | 8.4:-15514105 | MS.gene038713:CDS |
AGGGAGTTGATGAAGGTTGA+TGG | 0.335126 | 8.4:-15513118 | MS.gene038713:CDS |
GGTATGAATTCTTCTAGAAT+TGG | 0.343936 | 8.4:+15514199 | None:intergenic |
GCTCCACCATTTCTATGTTT+AGG | 0.345291 | 8.4:+15513992 | None:intergenic |
TGTGCTGCAGTTGCATATTC+TGG | 0.345650 | 8.4:+15512769 | None:intergenic |
CATGCTGGAGAGGTAGAAAA+AGG | 0.354964 | 8.4:-15513869 | MS.gene038713:CDS |
TTATTATTGAACAGAAATAT+AGG | 0.370436 | 8.4:-15512876 | MS.gene038713:intron |
TCCATGTTACTGAAATCATT+TGG | 0.380670 | 8.4:-15514554 | MS.gene038713:CDS |
ATGTATGTGATAAGGCAAAT+TGG | 0.383284 | 8.4:-15514126 | MS.gene038713:CDS |
GAAGTTGATCATCAAGGAAA+AGG | 0.397063 | 8.4:-15513827 | MS.gene038713:CDS |
AGGATGAAGGGGAGAGGAAA+GGG | 0.399338 | 8.4:-15512480 | MS.gene038713:CDS |
CCAAGTCCAAGTGCACAAAA+TGG | 0.410271 | 8.4:-15512838 | MS.gene038713:CDS |
AGGGGAGTTCTGAGGATGAA+GGG | 0.415570 | 8.4:-15512492 | MS.gene038713:CDS |
ACAAATCTACGGTGCAAGTC+TGG | 0.427901 | 8.4:+15513722 | None:intergenic |
GGAGGAACCCCTACTCTCTA+TGG | 0.427913 | 8.4:-15512742 | MS.gene038713:CDS |
GATGATGCTAATTGCTTCAC+TGG | 0.429693 | 8.4:+15514178 | None:intergenic |
GGGTTGGAGAGTATCGAAAA+TGG | 0.429853 | 8.4:-15512544 | MS.gene038713:CDS |
GTAGAAGCTAGTGCTAGTTC+AGG | 0.432544 | 8.4:+15513914 | None:intergenic |
GGAAGTAGCTGCTGCGGCGG+CGG | 0.442713 | 8.4:+15512640 | None:intergenic |
ACAATTCAAACCAAACTCAT+AGG | 0.443130 | 8.4:-15513766 | MS.gene038713:CDS |
GTTAATGCTCTTCAAATGCT+TGG | 0.449127 | 8.4:-15513701 | MS.gene038713:CDS |
GAGGGGAGTTCTGAGGATGA+AGG | 0.449245 | 8.4:-15512493 | MS.gene038713:CDS |
AAATAATAATGTATGTGATA+AGG | 0.450078 | 8.4:-15514134 | MS.gene038713:CDS |
ATTAGTCCTAAACATAGAAA+TGG | 0.460300 | 8.4:-15513998 | MS.gene038713:CDS |
GAGGATGAAGGGGAGAGGAA+AGG | 0.465500 | 8.4:-15512481 | MS.gene038713:CDS |
CACATGTCTCCGGTGAACCT+TGG | 0.465967 | 8.4:+15512572 | None:intergenic |
GGCAACACCAAAACAGATAA+GGG | 0.469043 | 8.4:-15513137 | MS.gene038713:CDS |
AACCCGTCTCCACATGTCTC+CGG | 0.479058 | 8.4:+15512562 | None:intergenic |
GGGGAGTTCTGAGGATGAAG+GGG | 0.481259 | 8.4:-15512491 | MS.gene038713:CDS |
GGTTTGTTGAAGAGAGCAAT+GGG | 0.485151 | 8.4:-15512459 | MS.gene038713:CDS |
TGAGTTTGTGATGATGCTAC+TGG | 0.486233 | 8.4:+15513800 | None:intergenic |
CAGTAGTGTAGTACTGATCT+TGG | 0.489595 | 8.4:+15512665 | None:intergenic |
TTCACCATCTGAACTAGGCT+TGG | 0.491547 | 8.4:-15514597 | MS.gene038713:CDS |
CCACATTACTGCACTGCTCC+AGG | 0.496026 | 8.4:-15512688 | MS.gene038713:CDS |
GCCACACGGCCAAGGTTCAC+CGG | 0.500443 | 8.4:-15512581 | MS.gene038713:CDS |
ATTAGCATCATCAGAAACAT+TGG | 0.504933 | 8.4:-15514167 | MS.gene038713:CDS |
GTTCTGAGGATGAAGGGGAG+AGG | 0.509113 | 8.4:-15512486 | MS.gene038713:CDS |
CAAATGCTTGGTGGATCTCA+AGG | 0.514435 | 8.4:-15513689 | MS.gene038713:intron |
GATGACCACCATAGAGAGTA+GGG | 0.520807 | 8.4:+15512734 | None:intergenic |
GAAGAGGATAAGAAACATGC+TGG | 0.521576 | 8.4:-15513884 | MS.gene038713:CDS |
GTGTAGTACTGATCTTGGCC+TGG | 0.523675 | 8.4:+15512670 | None:intergenic |
TGGCAACACCAAAACAGATA+AGG | 0.524534 | 8.4:-15513138 | MS.gene038713:CDS |
GGCGGAAGTAGCTGCTGCGG+CGG | 0.525740 | 8.4:+15512637 | None:intergenic |
GAGAGTAGTAGCTGGAAAGA+GGG | 0.527047 | 8.4:-15512511 | MS.gene038713:CDS |
AAGTTGATCATCAAGGAAAA+GGG | 0.527682 | 8.4:-15513826 | MS.gene038713:CDS |
TGCATGCAACTTCTCACAAA+CGG | 0.528281 | 8.4:-15514434 | MS.gene038713:intron |
AGAGTGAGATGATGAGAAGT+AGG | 0.531857 | 8.4:+15512712 | None:intergenic |
AAAACTACTAGCTGTGCTGC+TGG | 0.531932 | 8.4:+15512811 | None:intergenic |
CAAGCGTTTAGATCGAATCA+AGG | 0.533730 | 8.4:-15514229 | MS.gene038713:CDS |
GGGTTTGTTGAAGAGAGCAA+TGG | 0.536366 | 8.4:-15512460 | MS.gene038713:CDS |
GAAGAGCATTAACAAATCTA+CGG | 0.536877 | 8.4:+15513711 | None:intergenic |
TCCAAATGATTTCAGTAACA+TGG | 0.537583 | 8.4:+15514553 | None:intergenic |
CACCGGAGACATGTGGAGAC+GGG | 0.540363 | 8.4:-15512564 | MS.gene038713:CDS |
ATGGCTTCACCATCTGAACT+AGG | 0.543239 | 8.4:-15514602 | MS.gene038713:CDS |
CAATCCAAGCCTAGTTCAGA+TGG | 0.544635 | 8.4:+15514593 | None:intergenic |
TGAAGTTAAAAGCCATCTGC+AGG | 0.544962 | 8.4:-15513083 | MS.gene038713:intron |
GGAGAGTAGTAGCTGGAAAG+AGG | 0.546618 | 8.4:-15512512 | MS.gene038713:CDS |
AATGCTCTTCAAATGCTTGG+TGG | 0.549954 | 8.4:-15513698 | MS.gene038713:CDS |
ACAGATAAGGGAGTTGATGA+AGG | 0.551674 | 8.4:-15513125 | MS.gene038713:CDS |
GGATGACCACCATAGAGAGT+AGG | 0.564523 | 8.4:+15512733 | None:intergenic |
GGATAAGAAACATGCTGGAG+AGG | 0.570240 | 8.4:-15513879 | MS.gene038713:CDS |
AGACGTCGGAGAGTAGTAGC+TGG | 0.573303 | 8.4:-15512519 | MS.gene038713:CDS |
TATGCAACTGCAGCACATGC+AGG | 0.576335 | 8.4:-15512763 | MS.gene038713:CDS |
GAGAGAGAATTACCTGCAGA+TGG | 0.576980 | 8.4:+15513071 | None:intergenic |
TCACCGGAGACATGTGGAGA+CGG | 0.576988 | 8.4:-15512565 | MS.gene038713:CDS |
GGGAATGAAGTTGATCATCA+AGG | 0.578253 | 8.4:-15513833 | MS.gene038713:CDS |
AGTCCTAAACATAGAAATGG+TGG | 0.579197 | 8.4:-15513995 | MS.gene038713:CDS |
GGAGACATGTGGAGACGGGT+TGG | 0.587274 | 8.4:-15512560 | MS.gene038713:CDS |
AGAAATAACTCCTCTTGTCA+AGG | 0.588185 | 8.4:-15513947 | MS.gene038713:CDS |
GCTGCAGTTGCATATTCTGG+TGG | 0.594788 | 8.4:+15512772 | None:intergenic |
TGAACCTTGGCCGTGTGGCG+TGG | 0.595965 | 8.4:+15512585 | None:intergenic |
ATAGGAAAGCAAGAAGGTGT+TGG | 0.602381 | 8.4:-15513748 | MS.gene038713:CDS |
AAGACCACGCCACACGGCCA+AGG | 0.603883 | 8.4:-15512589 | MS.gene038713:CDS |
CTGCAGTTGCATATTCTGGT+GGG | 0.605931 | 8.4:+15512773 | None:intergenic |
AGTAACATGGAGTAGCTATG+TGG | 0.617118 | 8.4:+15514566 | None:intergenic |
TGGTGCATGTGATGAGGTGG+CGG | 0.620813 | 8.4:+15512619 | None:intergenic |
AACTCCTCTTGTCAAGGACA+AGG | 0.622383 | 8.4:-15513941 | MS.gene038713:CDS |
GTGGCGTGGTCTTGTAGACA+TGG | 0.624325 | 8.4:+15512599 | None:intergenic |
CTGGAAAGAGGGGAGTTCTG+AGG | 0.624534 | 8.4:-15512500 | MS.gene038713:CDS |
GGTGGCGGAAGTAGCTGCTG+CGG | 0.626284 | 8.4:+15512634 | None:intergenic |
AGAGTAGTAGCTGGAAAGAG+GGG | 0.629458 | 8.4:-15512510 | MS.gene038713:CDS |
AAGACCTTGTCCTTGACAAG+AGG | 0.632597 | 8.4:+15513937 | None:intergenic |
AAACTCATAGGAAAGCAAGA+AGG | 0.642113 | 8.4:-15513754 | MS.gene038713:CDS |
TCCGGTGAACCTTGGCCGTG+TGG | 0.647253 | 8.4:+15512580 | None:intergenic |
GTCTACAAGACCACGCCACA+CGG | 0.648472 | 8.4:-15512595 | MS.gene038713:CDS |
ACATGGTGCATGTGATGAGG+TGG | 0.655489 | 8.4:+15512616 | None:intergenic |
CCTGGAGCAGTGCAGTAATG+TGG | 0.657609 | 8.4:+15512688 | None:intergenic |
GTGAGAAGTTGCATGCAGAG+AGG | 0.660628 | 8.4:+15514440 | None:intergenic |
CAAGGTTCACCGGAGACATG+TGG | 0.663048 | 8.4:-15512571 | MS.gene038713:CDS |
TAGACATGGTGCATGTGATG+AGG | 0.673422 | 8.4:+15512613 | None:intergenic |
GCAACTGCAGCACATGCAGG+AGG | 0.687455 | 8.4:-15512760 | MS.gene038713:CDS |
TATCGAAAATGGAAAGACGT+CGG | 0.689251 | 8.4:-15512533 | MS.gene038713:CDS |
GGAACCCCTACTCTCTATGG+TGG | 0.690464 | 8.4:-15512739 | MS.gene038713:CDS |
ATGACCACCATAGAGAGTAG+GGG | 0.721767 | 8.4:+15512735 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATTATTATATATTTAA+GGG | - | chr8.4:15513645-15513664 | MS.gene038713:intron | 0.0% |
!! | TATAAAAAAAAAAAAAAAAA+AGG | + | chr8.4:15513786-15513805 | None:intergenic | 0.0% |
!! | TTAAAATTATTATATATTTA+AGG | - | chr8.4:15513644-15513663 | MS.gene038713:intron | 0.0% |
!! | AAATAATAATGTATGTGATA+AGG | - | chr8.4:15512903-15512922 | MS.gene038713:intron | 15.0% |
!! | AAATTTAGTCAAATGTTATT+AGG | - | chr8.4:15513757-15513776 | MS.gene038713:CDS | 15.0% |
!! | AATGATAACAATAACAATAT+TGG | - | chr8.4:15513009-15513028 | MS.gene038713:intron | 15.0% |
!! | ATACTATAAAAAAGAATAGA+TGG | - | chr8.4:15513471-15513490 | MS.gene038713:intron | 15.0% |
!! | GTTACATATAAAAGAAAAAA+AGG | + | chr8.4:15512644-15512663 | None:intergenic | 15.0% |
!! | TTATTATTGAACAGAAATAT+AGG | - | chr8.4:15514161-15514180 | MS.gene038713:CDS | 15.0% |
!! | TTTCTTTATAAAATAGTCTT+AGG | - | chr8.4:15513526-15513545 | MS.gene038713:intron | 15.0% |
!!! | AAATGTTTGATTTATTATAG+TGG | - | chr8.4:15513879-15513898 | MS.gene038713:CDS | 15.0% |
!! | AAAAAGGTAAAACAAATTCA+GGG | - | chr8.4:15513184-15513203 | MS.gene038713:intron | 20.0% |
!! | ACATATAAAAGAAAAAAAGG+TGG | + | chr8.4:15512641-15512660 | None:intergenic | 20.0% |
!! | GCAAAAGAAAACATATAATA+AGG | + | chr8.4:15513443-15513462 | None:intergenic | 20.0% |
!!! | GTTATCATTAATTTCTTTTG+TGG | + | chr8.4:15512998-15513017 | None:intergenic | 20.0% |
!!! | TTATTTCTTTCTTTTGAGAA+TGG | + | chr8.4:15513078-15513097 | None:intergenic | 20.0% |
! | AATACCACTAGTATCAATTA+TGG | - | chr8.4:15513584-15513603 | MS.gene038713:intron | 25.0% |
! | ATAATTGATACTAGTGGTAT+TGG | + | chr8.4:15513585-15513604 | None:intergenic | 25.0% |
! | ATTAGTCCTAAACATAGAAA+TGG | - | chr8.4:15513039-15513058 | MS.gene038713:intron | 25.0% |
! | GAAAAAGGTAAAACAAATTC+AGG | - | chr8.4:15513183-15513202 | MS.gene038713:intron | 25.0% |
! | TAATTGATACTAGTGGTATT+GGG | + | chr8.4:15513584-15513603 | None:intergenic | 25.0% |
!! | CTTTTGTATTTTACTTTGCT+TGG | - | chr8.4:15514097-15514116 | MS.gene038713:CDS | 25.0% |
!!! | GACACAATAGTTTTTCAAAT+GGG | - | chr8.4:15513667-15513686 | MS.gene038713:intron | 25.0% |
!!! | TTCTTTTGAGAATGGTAAAA+AGG | + | chr8.4:15513070-15513089 | None:intergenic | 25.0% |
ACAATTCAAACCAAACTCAT+AGG | - | chr8.4:15513271-15513290 | MS.gene038713:intron | 30.0% | |
ATGTATGTGATAAGGCAAAT+TGG | - | chr8.4:15512911-15512930 | MS.gene038713:intron | 30.0% | |
ATTAGCATCATCAGAAACAT+TGG | - | chr8.4:15512870-15512889 | MS.gene038713:intron | 30.0% | |
TAATTCTCTCTCTCAGTTTA+AGG | - | chr8.4:15513977-15513996 | MS.gene038713:CDS | 30.0% | |
TCCAAATGATTTCAGTAACA+TGG | + | chr8.4:15512487-15512506 | None:intergenic | 30.0% | |
TCCATGTTACTGAAATCATT+TGG | - | chr8.4:15512483-15512502 | MS.gene038713:CDS | 30.0% | |
TGTCAGATAAGATTTGAACT+CGG | + | chr8.4:15512700-15512719 | None:intergenic | 30.0% | |
TTGTTCCTAATTCACTTGTT+TGG | + | chr8.4:15512960-15512979 | None:intergenic | 30.0% | |
! | AAGTTGATCATCAAGGAAAA+GGG | - | chr8.4:15513211-15513230 | MS.gene038713:intron | 30.0% |
!! | GAAGAGCATTAACAAATCTA+CGG | + | chr8.4:15513329-15513348 | None:intergenic | 30.0% |
!! | GGACACAATAGTTTTTCAAA+TGG | - | chr8.4:15513666-15513685 | MS.gene038713:intron | 30.0% |
!! | GGTATGAATTCTTCTAGAAT+TGG | + | chr8.4:15512841-15512860 | None:intergenic | 30.0% |
!!! | AGTAGTTTTAGGAGGAATAT+GGG | - | chr8.4:15514240-15514259 | MS.gene038713:CDS | 30.0% |
!!! | ATGGCTTTTAACTTCATCAT+TGG | + | chr8.4:15513950-15513969 | None:intergenic | 30.0% |
!!! | TAGTAGTTTTAGGAGGAATA+TGG | - | chr8.4:15514239-15514258 | MS.gene038713:CDS | 30.0% |
AAACTCATAGGAAAGCAAGA+AGG | - | chr8.4:15513283-15513302 | MS.gene038713:intron | 35.0% | |
AGAAATAACTCCTCTTGTCA+AGG | - | chr8.4:15513090-15513109 | MS.gene038713:CDS | 35.0% | |
AGAGCCATAATTGATACTAG+TGG | + | chr8.4:15513591-15513610 | None:intergenic | 35.0% | |
AGCTTCTACTCAAAAAGAAG+AGG | - | chr8.4:15513137-15513156 | MS.gene038713:CDS | 35.0% | |
AGTACAGCAACAAACAACAA+AGG | + | chr8.4:15514040-15514059 | None:intergenic | 35.0% | |
AGTCCTAAACATAGAAATGG+TGG | - | chr8.4:15513042-15513061 | MS.gene038713:intron | 35.0% | |
AGTTCGTTATAAGTTGTCAG+AGG | + | chr8.4:15514079-15514098 | None:intergenic | 35.0% | |
GTTAATGCTCTTCAAATGCT+TGG | - | chr8.4:15513336-15513355 | MS.gene038713:intron | 35.0% | |
TATCGAAAATGGAAAGACGT+CGG | - | chr8.4:15514504-15514523 | MS.gene038713:CDS | 35.0% | |
TTCTTGCTTTCCTATGAGTT+TGG | + | chr8.4:15513284-15513303 | None:intergenic | 35.0% | |
! | ATCAACTCCCTTATCTGTTT+TGG | + | chr8.4:15513910-15513929 | None:intergenic | 35.0% |
! | GAAGTTGATCATCAAGGAAA+AGG | - | chr8.4:15513210-15513229 | MS.gene038713:intron | 35.0% |
AATGCTCTTCAAATGCTTGG+TGG | - | chr8.4:15513339-15513358 | MS.gene038713:intron | 40.0% | |
AGAGTGAGATGATGAGAAGT+AGG | + | chr8.4:15514328-15514347 | None:intergenic | 40.0% | |
AGTAACATGGAGTAGCTATG+TGG | + | chr8.4:15512474-15512493 | None:intergenic | 40.0% | |
CAAGCGTTTAGATCGAATCA+AGG | - | chr8.4:15512808-15512827 | MS.gene038713:CDS | 40.0% | |
GAAGAGGATAAGAAACATGC+TGG | - | chr8.4:15513153-15513172 | MS.gene038713:intron | 40.0% | |
GATGATGCTAATTGCTTCAC+TGG | + | chr8.4:15512862-15512881 | None:intergenic | 40.0% | |
GCTCCACCATTTCTATGTTT+AGG | + | chr8.4:15513048-15513067 | None:intergenic | 40.0% | |
GGATGACAAGTGCACAATTA+TGG | - | chr8.4:15512932-15512951 | MS.gene038713:intron | 40.0% | |
GGCAACACCAAAACAGATAA+GGG | - | chr8.4:15513900-15513919 | MS.gene038713:CDS | 40.0% | |
GGGCTTATTCATTGTGACTT+AGG | - | chr8.4:15513687-15513706 | MS.gene038713:intron | 40.0% | |
TGAAGTTAAAAGCCATCTGC+AGG | - | chr8.4:15513954-15513973 | MS.gene038713:CDS | 40.0% | |
TGACTTAGGTAGTACTAGCA+AGG | - | chr8.4:15513701-15513720 | MS.gene038713:CDS | 40.0% | |
TGCATGCAACTTCTCACAAA+CGG | - | chr8.4:15512603-15512622 | MS.gene038713:CDS | 40.0% | |
TGGAGCCAAACAAGTGAATT+AGG | - | chr8.4:15512952-15512971 | MS.gene038713:intron | 40.0% | |
TGGCAACACCAAAACAGATA+AGG | - | chr8.4:15513899-15513918 | MS.gene038713:CDS | 40.0% | |
TTCACATCTCTGCTTGATTC+TGG | + | chr8.4:15513739-15513758 | None:intergenic | 40.0% | |
! | ATAGGAAAGCAAGAAGGTGT+TGG | - | chr8.4:15513289-15513308 | MS.gene038713:intron | 40.0% |
! | GGGAATGAAGTTGATCATCA+AGG | - | chr8.4:15513204-15513223 | MS.gene038713:intron | 40.0% |
! | TGAGTTTGTGATGATGCTAC+TGG | + | chr8.4:15513240-15513259 | None:intergenic | 40.0% |
!! | ACAGATAAGGGAGTTGATGA+AGG | - | chr8.4:15513912-15513931 | MS.gene038713:CDS | 40.0% |
!! | CAGTAGTGTAGTACTGATCT+TGG | + | chr8.4:15514375-15514394 | None:intergenic | 40.0% |
!! | GGTTTGTTGAAGAGAGCAAT+GGG | - | chr8.4:15514578-15514597 | MS.gene038713:CDS | 40.0% |
AAAACTACTAGCTGTGCTGC+TGG | + | chr8.4:15514229-15514248 | None:intergenic | 45.0% | |
AACTCCTCTTGTCAAGGACA+AGG | - | chr8.4:15513096-15513115 | MS.gene038713:CDS | 45.0% | |
AAGACCTTGTCCTTGACAAG+AGG | + | chr8.4:15513103-15513122 | None:intergenic | 45.0% | |
ACAAATCTACGGTGCAAGTC+TGG | + | chr8.4:15513318-15513337 | None:intergenic | 45.0% | |
AGAGTAGTAGCTGGAAAGAG+GGG | - | chr8.4:15514527-15514546 | MS.gene038713:CDS | 45.0% | |
ATGACCACCATAGAGAGTAG+GGG | + | chr8.4:15514305-15514324 | None:intergenic | 45.0% | |
ATGGCTTCACCATCTGAACT+AGG | - | chr8.4:15512435-15512454 | MS.gene038713:CDS | 45.0% | |
CAATCCAAGCCTAGTTCAGA+TGG | + | chr8.4:15512447-15512466 | None:intergenic | 45.0% | |
CATGCTGGAGAGGTAGAAAA+AGG | - | chr8.4:15513168-15513187 | MS.gene038713:intron | 45.0% | |
CCAAGTCCAAGTGCACAAAA+TGG | - | chr8.4:15514199-15514218 | MS.gene038713:CDS | 45.0% | |
CTGCAGTTGCATATTCTGGT+GGG | + | chr8.4:15514267-15514286 | None:intergenic | 45.0% | |
GAGAGAGAATTACCTGCAGA+TGG | + | chr8.4:15513969-15513988 | None:intergenic | 45.0% | |
GAGAGTAGTAGCTGGAAAGA+GGG | - | chr8.4:15514526-15514545 | MS.gene038713:CDS | 45.0% | |
GATGACCACCATAGAGAGTA+GGG | + | chr8.4:15514306-15514325 | None:intergenic | 45.0% | |
GGATAAGAAACATGCTGGAG+AGG | - | chr8.4:15513158-15513177 | MS.gene038713:intron | 45.0% | |
GTAGAAGCTAGTGCTAGTTC+AGG | + | chr8.4:15513126-15513145 | None:intergenic | 45.0% | |
TAGACATGGTGCATGTGATG+AGG | + | chr8.4:15514427-15514446 | None:intergenic | 45.0% | |
TGTGCTGCAGTTGCATATTC+TGG | + | chr8.4:15514271-15514290 | None:intergenic | 45.0% | |
TTCACCATCTGAACTAGGCT+TGG | - | chr8.4:15512440-15512459 | MS.gene038713:CDS | 45.0% | |
! | CAAATGCTTGGTGGATCTCA+AGG | - | chr8.4:15513348-15513367 | MS.gene038713:intron | 45.0% |
! | CCATTTTGTGCACTTGGACT+TGG | + | chr8.4:15514202-15514221 | None:intergenic | 45.0% |
! | GCAGCACAGCTAGTAGTTTT+AGG | - | chr8.4:15514229-15514248 | MS.gene038713:CDS | 45.0% |
! | TCGTGCACAATTTTCAGCGA+TGG | - | chr8.4:15512765-15512784 | MS.gene038713:CDS | 45.0% |
!! | AGGGAGTTGATGAAGGTTGA+TGG | - | chr8.4:15513919-15513938 | MS.gene038713:CDS | 45.0% |
!! | GGGTTGGAGAGTATCGAAAA+TGG | - | chr8.4:15514493-15514512 | MS.gene038713:CDS | 45.0% |
!! | GGGTTTGTTGAAGAGAGCAA+TGG | - | chr8.4:15514577-15514596 | MS.gene038713:CDS | 45.0% |
!!! | GCACAGCTAGTAGTTTTAGG+AGG | - | chr8.4:15514232-15514251 | MS.gene038713:CDS | 45.0% |
ACATGGTGCATGTGATGAGG+TGG | + | chr8.4:15514424-15514443 | None:intergenic | 50.0% | |
AGGATGAAGGGGAGAGGAAA+GGG | - | chr8.4:15514557-15514576 | MS.gene038713:CDS | 50.0% | |
GCTGCAGTTGCATATTCTGG+TGG | + | chr8.4:15514268-15514287 | None:intergenic | 50.0% | |
GGAGAGTAGTAGCTGGAAAG+AGG | - | chr8.4:15514525-15514544 | MS.gene038713:CDS | 50.0% | |
GGATGACCACCATAGAGAGT+AGG | + | chr8.4:15514307-15514326 | None:intergenic | 50.0% | |
GTGAGAAGTTGCATGCAGAG+AGG | + | chr8.4:15512600-15512619 | None:intergenic | 50.0% | |
TATGCAACTGCAGCACATGC+AGG | - | chr8.4:15514274-15514293 | MS.gene038713:intron | 50.0% | |
TGAACTCGGTCTCTTGAGAG+CGG | + | chr8.4:15512686-15512705 | None:intergenic | 50.0% | |
! | GGTGCACCATTTTGTGCACT+TGG | + | chr8.4:15514208-15514227 | None:intergenic | 50.0% |
!! | AGGGGAGTTCTGAGGATGAA+GGG | - | chr8.4:15514545-15514564 | MS.gene038713:CDS | 50.0% |
!! | GTGTAGTACTGATCTTGGCC+TGG | + | chr8.4:15514370-15514389 | None:intergenic | 50.0% |
AACCCGTCTCCACATGTCTC+CGG | + | chr8.4:15514478-15514497 | None:intergenic | 55.0% | |
AGACGTCGGAGAGTAGTAGC+TGG | - | chr8.4:15514518-15514537 | MS.gene038713:CDS | 55.0% | |
CAAGGTTCACCGGAGACATG+TGG | - | chr8.4:15514466-15514485 | MS.gene038713:CDS | 55.0% | |
CACATGTCTCCGGTGAACCT+TGG | + | chr8.4:15514468-15514487 | None:intergenic | 55.0% | |
CCACATTACTGCACTGCTCC+AGG | - | chr8.4:15514349-15514368 | MS.gene038713:intron | 55.0% | |
CCTGGAGCAGTGCAGTAATG+TGG | + | chr8.4:15514352-15514371 | None:intergenic | 55.0% | |
CTGGAAAGAGGGGAGTTCTG+AGG | - | chr8.4:15514537-15514556 | MS.gene038713:CDS | 55.0% | |
GAGGATGAAGGGGAGAGGAA+AGG | - | chr8.4:15514556-15514575 | MS.gene038713:CDS | 55.0% | |
GGAACCCCTACTCTCTATGG+TGG | - | chr8.4:15514298-15514317 | MS.gene038713:intron | 55.0% | |
GGAGGAACCCCTACTCTCTA+TGG | - | chr8.4:15514295-15514314 | MS.gene038713:intron | 55.0% | |
GTCTACAAGACCACGCCACA+CGG | - | chr8.4:15514442-15514461 | MS.gene038713:CDS | 55.0% | |
TCACCGGAGACATGTGGAGA+CGG | - | chr8.4:15514472-15514491 | MS.gene038713:CDS | 55.0% | |
TGGTGCATGTGATGAGGTGG+CGG | + | chr8.4:15514421-15514440 | None:intergenic | 55.0% | |
!! | GAGGGGAGTTCTGAGGATGA+AGG | - | chr8.4:15514544-15514563 | MS.gene038713:CDS | 55.0% |
!! | GGGGAGTTCTGAGGATGAAG+GGG | - | chr8.4:15514546-15514565 | MS.gene038713:CDS | 55.0% |
!! | GTGGCGTGGTCTTGTAGACA+TGG | + | chr8.4:15514441-15514460 | None:intergenic | 55.0% |
!! | GTTCTGAGGATGAAGGGGAG+AGG | - | chr8.4:15514551-15514570 | MS.gene038713:CDS | 55.0% |
CACCGGAGACATGTGGAGAC+GGG | - | chr8.4:15514473-15514492 | MS.gene038713:CDS | 60.0% | |
GCAACTGCAGCACATGCAGG+AGG | - | chr8.4:15514277-15514296 | MS.gene038713:intron | 60.0% | |
GGAGACATGTGGAGACGGGT+TGG | - | chr8.4:15514477-15514496 | MS.gene038713:CDS | 60.0% | |
AAGACCACGCCACACGGCCA+AGG | - | chr8.4:15514448-15514467 | MS.gene038713:CDS | 65.0% | |
GCCACACGGCCAAGGTTCAC+CGG | - | chr8.4:15514456-15514475 | MS.gene038713:CDS | 65.0% | |
TCCGGTGAACCTTGGCCGTG+TGG | + | chr8.4:15514460-15514479 | None:intergenic | 65.0% | |
TGAACCTTGGCCGTGTGGCG+TGG | + | chr8.4:15514455-15514474 | None:intergenic | 65.0% | |
!! | GGTGGCGGAAGTAGCTGCTG+CGG | + | chr8.4:15514406-15514425 | None:intergenic | 65.0% |
GGAAGTAGCTGCTGCGGCGG+CGG | + | chr8.4:15514400-15514419 | None:intergenic | 70.0% | |
GGCGGAAGTAGCTGCTGCGG+CGG | + | chr8.4:15514403-15514422 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 15512435 | 15514624 | 15512435 | ID=MS.gene038713 |
chr8.4 | mRNA | 15512435 | 15514624 | 15512435 | ID=MS.gene038713.t1;Parent=MS.gene038713 |
chr8.4 | exon | 15514435 | 15514624 | 15514435 | ID=MS.gene038713.t1.exon1;Parent=MS.gene038713.t1 |
chr8.4 | CDS | 15514435 | 15514624 | 15514435 | ID=cds.MS.gene038713.t1;Parent=MS.gene038713.t1 |
chr8.4 | exon | 15513690 | 15514277 | 15513690 | ID=MS.gene038713.t1.exon2;Parent=MS.gene038713.t1 |
chr8.4 | CDS | 15513690 | 15514277 | 15513690 | ID=cds.MS.gene038713.t1;Parent=MS.gene038713.t1 |
chr8.4 | exon | 15513084 | 15513160 | 15513084 | ID=MS.gene038713.t1.exon3;Parent=MS.gene038713.t1 |
chr8.4 | CDS | 15513084 | 15513160 | 15513084 | ID=cds.MS.gene038713.t1;Parent=MS.gene038713.t1 |
chr8.4 | exon | 15512435 | 15512884 | 15512435 | ID=MS.gene038713.t1.exon4;Parent=MS.gene038713.t1 |
chr8.4 | CDS | 15512435 | 15512884 | 15512435 | ID=cds.MS.gene038713.t1;Parent=MS.gene038713.t1 |
Gene Sequence |
Protein sequence |