Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038752.t1 | XP_013458053.1 | 96.7 | 390 | 9 | 4 | 1 | 388 | 1 | 388 | 4.30E-165 | 590.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038752.t1 | A1YKT1 | 75.0 | 64 | 16 | 0 | 127 | 190 | 144 | 207 | 4.0e-18 | 94.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038752.t1 | A0A072UQH4 | 96.7 | 390 | 9 | 4 | 1 | 388 | 1 | 388 | 3.1e-165 | 590.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene038752.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038752.t1 | MTR_4g111935 | 96.667 | 390 | 9 | 4 | 1 | 388 | 1 | 388 | 0.0 | 763 |
| MS.gene038752.t1 | MTR_6g017055 | 41.176 | 170 | 85 | 3 | 110 | 266 | 105 | 272 | 2.94e-28 | 115 |
| MS.gene038752.t1 | MTR_7g018500 | 66.129 | 62 | 21 | 0 | 133 | 194 | 122 | 183 | 4.62e-21 | 94.0 |
| MS.gene038752.t1 | MTR_1g103380 | 59.701 | 67 | 27 | 0 | 129 | 195 | 199 | 265 | 9.31e-19 | 88.2 |
| MS.gene038752.t1 | MTR_8g463380 | 45.918 | 98 | 51 | 2 | 109 | 205 | 31 | 127 | 7.21e-17 | 82.0 |
| MS.gene038752.t1 | MTR_7g015010 | 32.035 | 231 | 129 | 9 | 132 | 358 | 58 | 264 | 5.14e-16 | 79.0 |
| MS.gene038752.t1 | MTR_2g078200 | 48.718 | 78 | 39 | 1 | 113 | 190 | 3 | 79 | 4.67e-15 | 75.5 |
| MS.gene038752.t1 | MTR_6g015350 | 58.621 | 58 | 24 | 0 | 132 | 189 | 50 | 107 | 6.17e-15 | 75.5 |
| MS.gene038752.t1 | MTR_4g079580 | 50.000 | 64 | 32 | 0 | 127 | 190 | 18 | 81 | 9.72e-15 | 75.1 |
| MS.gene038752.t1 | MTR_3g026050 | 33.099 | 142 | 87 | 2 | 132 | 268 | 58 | 196 | 2.62e-14 | 74.3 |
| MS.gene038752.t1 | MTR_2g090960 | 49.206 | 63 | 32 | 0 | 127 | 189 | 20 | 82 | 2.80e-14 | 73.6 |
| MS.gene038752.t1 | MTR_4g109660 | 48.276 | 58 | 30 | 0 | 132 | 189 | 57 | 114 | 5.96e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038752.t1 | AT3G18550 | 31.250 | 304 | 161 | 9 | 1 | 263 | 5 | 301 | 1.59e-24 | 104 |
| MS.gene038752.t1 | AT3G18550 | 31.250 | 304 | 161 | 9 | 1 | 263 | 5 | 301 | 1.59e-24 | 104 |
| MS.gene038752.t1 | AT3G18550 | 31.250 | 304 | 161 | 9 | 1 | 263 | 5 | 301 | 1.93e-24 | 104 |
| MS.gene038752.t1 | AT3G18550 | 36.058 | 208 | 110 | 5 | 1 | 190 | 5 | 207 | 3.39e-24 | 103 |
| MS.gene038752.t1 | AT1G67260 | 51.546 | 97 | 39 | 1 | 108 | 196 | 56 | 152 | 1.12e-23 | 101 |
| MS.gene038752.t1 | AT1G67260 | 51.546 | 97 | 39 | 1 | 108 | 196 | 56 | 152 | 1.12e-23 | 101 |
| MS.gene038752.t1 | AT1G67260 | 51.546 | 97 | 39 | 1 | 108 | 196 | 56 | 152 | 1.25e-23 | 101 |
| MS.gene038752.t1 | AT1G68800 | 65.217 | 69 | 23 | 1 | 122 | 189 | 102 | 170 | 2.41e-22 | 97.4 |
| MS.gene038752.t1 | AT1G68800 | 65.217 | 69 | 23 | 1 | 122 | 189 | 102 | 170 | 2.45e-22 | 97.4 |
| MS.gene038752.t1 | AT4G18390 | 37.179 | 156 | 65 | 4 | 127 | 270 | 38 | 172 | 3.49e-19 | 88.6 |
| MS.gene038752.t1 | AT4G18390 | 37.179 | 156 | 65 | 4 | 127 | 270 | 38 | 172 | 3.49e-19 | 88.6 |
| MS.gene038752.t1 | AT3G15030 | 44.898 | 98 | 53 | 1 | 94 | 190 | 7 | 104 | 4.73e-17 | 82.8 |
| MS.gene038752.t1 | AT3G15030 | 44.898 | 98 | 53 | 1 | 94 | 190 | 7 | 104 | 4.73e-17 | 82.8 |
| MS.gene038752.t1 | AT3G15030 | 44.898 | 98 | 53 | 1 | 94 | 190 | 7 | 104 | 4.73e-17 | 82.8 |
| MS.gene038752.t1 | AT3G15030 | 44.898 | 98 | 53 | 1 | 94 | 190 | 7 | 104 | 4.73e-17 | 82.8 |
| MS.gene038752.t1 | AT1G53230 | 49.383 | 81 | 40 | 1 | 112 | 191 | 29 | 109 | 8.22e-16 | 79.0 |
| MS.gene038752.t1 | AT1G53230 | 49.383 | 81 | 40 | 1 | 112 | 191 | 29 | 109 | 8.22e-16 | 79.0 |
| MS.gene038752.t1 | AT1G30210 | 36.879 | 141 | 65 | 3 | 127 | 267 | 46 | 162 | 8.76e-15 | 75.1 |
| MS.gene038752.t1 | AT1G30210 | 36.879 | 141 | 65 | 3 | 127 | 267 | 46 | 162 | 8.76e-15 | 75.1 |
| MS.gene038752.t1 | AT2G31070 | 45.000 | 80 | 43 | 1 | 111 | 189 | 8 | 87 | 5.14e-14 | 73.2 |
| MS.gene038752.t1 | AT3G02150 | 53.448 | 58 | 27 | 0 | 132 | 189 | 75 | 132 | 2.88e-13 | 70.1 |
| MS.gene038752.t1 | AT3G02150 | 53.448 | 58 | 27 | 0 | 132 | 189 | 75 | 132 | 5.01e-13 | 70.1 |
| MS.gene038752.t1 | AT5G60970 | 48.333 | 60 | 31 | 0 | 130 | 189 | 62 | 121 | 1.20e-12 | 68.9 |
| MS.gene038752.t1 | AT5G08070 | 48.276 | 58 | 30 | 0 | 132 | 189 | 34 | 91 | 1.83e-11 | 64.3 |
| MS.gene038752.t1 | AT5G08070 | 48.276 | 58 | 30 | 0 | 132 | 189 | 34 | 91 | 1.83e-11 | 64.3 |
Find 66 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATATCATCAGGATAATT+AGG | 0.171473 | 8.3:-14171013 | None:intergenic |
| GAGAAGAAATAGTACTAATA+AGG | 0.277919 | 8.3:+14171558 | MS.gene038752:CDS |
| CAGAAAGGAGGAAGAGGAAA+GGG | 0.311180 | 8.3:-14170977 | None:intergenic |
| TTGCTTTCAAAGGAACAAAA+AGG | 0.336731 | 8.3:-14170917 | None:intergenic |
| CATGTTGTTGGAGGAAGATT+TGG | 0.344830 | 8.3:-14171054 | None:intergenic |
| TTTGGTCTTCAAGATATGTT+AGG | 0.353164 | 8.3:+14171337 | MS.gene038752:CDS |
| AGAAAGGAGGAAGAGGAAAG+GGG | 0.382698 | 8.3:-14170976 | None:intergenic |
| AAGGTGTTTGATCTCAAGTT+TGG | 0.394081 | 8.3:-14171404 | None:intergenic |
| TGCTAGGTTATTTCCATTGA+GGG | 0.401156 | 8.3:-14170879 | None:intergenic |
| CAATATCATCAGGATAATTA+GGG | 0.427407 | 8.3:-14171012 | None:intergenic |
| ACAGAAAGGAGGAAGAGGAA+AGG | 0.429249 | 8.3:-14170978 | None:intergenic |
| AATTTGAACTTACTTGTTGA+AGG | 0.433582 | 8.3:-14171951 | None:intergenic |
| GCTTTGATTGTTGAGTTTGA+AGG | 0.434606 | 8.3:-14171148 | None:intergenic |
| CTTCCTGCAGCTGCTGGTAA+AGG | 0.436015 | 8.3:+14171184 | MS.gene038752:CDS |
| TCAAGCTTGGATAATGAAGT+TGG | 0.437838 | 8.3:+14171496 | MS.gene038752:CDS |
| TTGTTATTCATCATCACAAC+AGG | 0.440557 | 8.3:-14171103 | None:intergenic |
| CTTTGTTCATTATGAGCAAA+TGG | 0.450640 | 8.3:+14171896 | MS.gene038752:CDS |
| TTGAGAGAATTGAACATCAT+AGG | 0.458304 | 8.3:-14171925 | None:intergenic |
| GGAAATCAACATCATGTTGT+TGG | 0.463207 | 8.3:-14171066 | None:intergenic |
| TCAAAACCGCGAAAGGACTA+AGG | 0.463298 | 8.3:+14171272 | MS.gene038752:CDS |
| CAAGAGAAAGGGCAAGAGAA+AGG | 0.468363 | 8.3:+14171623 | MS.gene038752:CDS |
| AGATTCTTCCACACTTTCAA+AGG | 0.468610 | 8.3:-14171743 | None:intergenic |
| TTTCAAAGGGGTTCCAAATG+AGG | 0.468951 | 8.3:-14171729 | None:intergenic |
| GATTTGGTGGCTGTCTTGAA+AGG | 0.472274 | 8.3:-14171038 | None:intergenic |
| GAAAGGAGGAAGAGGAAAGG+GGG | 0.475237 | 8.3:-14170975 | None:intergenic |
| AAGAGTGCATTCAATTCTAT+AGG | 0.477613 | 8.3:+14171589 | MS.gene038752:CDS |
| AAGAAACAGAAAGGAGGAAG+AGG | 0.480496 | 8.3:-14170983 | None:intergenic |
| CCGATCCCTTAGTCCTTTCG+CGG | 0.487376 | 8.3:-14171278 | None:intergenic |
| AATCTTCTTCCTGCAGCTGC+TGG | 0.488028 | 8.3:+14171178 | MS.gene038752:CDS |
| GATTCTTCCACACTTTCAAA+GGG | 0.488241 | 8.3:-14171742 | None:intergenic |
| TCAACAAACAGTTCCCTCAA+TGG | 0.498770 | 8.3:+14170866 | MS.gene038752:CDS |
| CAACAGGTGGATGATGAAGT+TGG | 0.500835 | 8.3:-14171087 | None:intergenic |
| GTTTGATCTCAAGTTTGGAT+TGG | 0.508056 | 8.3:-14171399 | None:intergenic |
| TGAAAGGGATCAATATCATC+AGG | 0.511469 | 8.3:-14171022 | None:intergenic |
| GTTGTTGGAGGAAGATTTGG+TGG | 0.511656 | 8.3:-14171051 | None:intergenic |
| TGAACAATTTCACCAATCCA+TGG | 0.514462 | 8.3:+14172063 | MS.gene038752:CDS |
| TCAAAGCAATACAATGAAGA+AGG | 0.515193 | 8.3:+14171694 | MS.gene038752:CDS |
| ATGCTAGGTTATTTCCATTG+AGG | 0.517513 | 8.3:-14170880 | None:intergenic |
| GGGAATTGAAAGAAACAGAA+AGG | 0.519347 | 8.3:-14170992 | None:intergenic |
| TACTGAAGGAGTTTCAAGCT+TGG | 0.530351 | 8.3:+14171483 | MS.gene038752:CDS |
| TGAAGTTGAGTTGCTTTCAA+AGG | 0.532484 | 8.3:-14170927 | None:intergenic |
| TTGCCTTTACCAGCAGCTGC+AGG | 0.547785 | 8.3:-14171187 | None:intergenic |
| GAAAGTGTGGAAGAATCTGC+AGG | 0.550929 | 8.3:+14171748 | MS.gene038752:CDS |
| TTGGAACCCCTTTGAAAGTG+TGG | 0.551418 | 8.3:+14171735 | MS.gene038752:CDS |
| ATTTGGTGGCTGTCTTGAAA+GGG | 0.555885 | 8.3:-14171037 | None:intergenic |
| GTGATTTAGAGGAAAATGCT+AGG | 0.566051 | 8.3:-14170895 | None:intergenic |
| AGCAAGATCAAAACCGCGAA+AGG | 0.567602 | 8.3:+14171265 | MS.gene038752:CDS |
| GAATTTGATTCATCAACTAG+TGG | 0.569958 | 8.3:-14171673 | None:intergenic |
| AATCAACATCATGTTGTTGG+AGG | 0.575800 | 8.3:-14171063 | None:intergenic |
| CAAAACCGCGAAAGGACTAA+GGG | 0.576240 | 8.3:+14171273 | MS.gene038752:CDS |
| TCAACTTCTGAATGTACTGA+AGG | 0.578330 | 8.3:+14171469 | MS.gene038752:CDS |
| AATCAGCTTCACATGATCAA+AGG | 0.583940 | 8.3:-14171806 | None:intergenic |
| AAGCAAGCAAAACAGTGGAC+TGG | 0.594986 | 8.3:+14171368 | MS.gene038752:CDS |
| GGTACACATCAGAGTACTCA+AGG | 0.596783 | 8.3:+14171769 | MS.gene038752:CDS |
| CCGCGAAAGGACTAAGGGAT+CGG | 0.598651 | 8.3:+14171278 | MS.gene038752:CDS |
| TTATTCATCATCACAACAGG+TGG | 0.603901 | 8.3:-14171100 | None:intergenic |
| AATTGAAAGAAACAGAAAGG+AGG | 0.604118 | 8.3:-14170989 | None:intergenic |
| TGTCACTTGAAGTTGCAAAG+AGG | 0.614161 | 8.3:+14171311 | MS.gene038752:CDS |
| AGCTTCACATGATCAAAGGA+AGG | 0.617475 | 8.3:-14171802 | None:intergenic |
| TGGTAAAGGCAAAACTGTAG+TGG | 0.630471 | 8.3:+14171198 | MS.gene038752:CDS |
| GGTAGCATGTTAATTAGATG+CGG | 0.636554 | 8.3:-14172111 | None:intergenic |
| AGAGAATTGAACATCATAGG+TGG | 0.646080 | 8.3:-14171922 | None:intergenic |
| AAGGGCAAGAGAAAGGACAG+AGG | 0.656288 | 8.3:+14171630 | MS.gene038752:CDS |
| ATTCTTCCACACTTTCAAAG+GGG | 0.682878 | 8.3:-14171741 | None:intergenic |
| TCATGTGAAGCTGATTGATG+AGG | 0.717288 | 8.3:+14171813 | MS.gene038752:CDS |
| ACAGTACTGATCATCATCAG+CGG | 0.729484 | 8.3:+14171125 | MS.gene038752:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CAATATCATCAGGATAATTA+GGG | - | chr8.3:14171015-14171034 | None:intergenic | 25.0% |
| ! | GAATAAAAACTAACCTCATT+TGG | + | chr8.3:14171716-14171735 | MS.gene038752:CDS | 25.0% |
| ! | GAGAAGAAATAGTACTAATA+AGG | + | chr8.3:14171558-14171577 | MS.gene038752:CDS | 25.0% |
| ! | TCAATATCATCAGGATAATT+AGG | - | chr8.3:14171016-14171035 | None:intergenic | 25.0% |
| !! | AATTTGAACTTACTTGTTGA+AGG | - | chr8.3:14171954-14171973 | None:intergenic | 25.0% |
| !!! | ATAACAAGTTTTTGTTGTTG+TGG | - | chr8.3:14171535-14171554 | None:intergenic | 25.0% |
| AATTGAAAGAAACAGAAAGG+AGG | - | chr8.3:14170992-14171011 | None:intergenic | 30.0% | |
| CTTTGTTCATTATGAGCAAA+TGG | + | chr8.3:14171896-14171915 | MS.gene038752:CDS | 30.0% | |
| GAATTTGATTCATCAACTAG+TGG | - | chr8.3:14171676-14171695 | None:intergenic | 30.0% | |
| GCTTCATATATGTATATGCA+TGG | - | chr8.3:14171979-14171998 | None:intergenic | 30.0% | |
| TAGAGAAAAAGCAAGAGAAA+GGG | + | chr8.3:14171612-14171631 | MS.gene038752:CDS | 30.0% | |
| TCAAAGCAATACAATGAAGA+AGG | + | chr8.3:14171694-14171713 | MS.gene038752:CDS | 30.0% | |
| TTGAGAGAATTGAACATCAT+AGG | - | chr8.3:14171928-14171947 | None:intergenic | 30.0% | |
| TTGCTTTCAAAGGAACAAAA+AGG | - | chr8.3:14170920-14170939 | None:intergenic | 30.0% | |
| ! | AAGAGTGCATTCAATTCTAT+AGG | + | chr8.3:14171589-14171608 | MS.gene038752:CDS | 30.0% |
| ! | TAACATTTTTCTCTCTTGCA+AGG | - | chr8.3:14171426-14171445 | None:intergenic | 30.0% |
| ! | TCTTGCTAGATCTTTTTCTT+TGG | - | chr8.3:14171234-14171253 | None:intergenic | 30.0% |
| ! | TTGTTATTCATCATCACAAC+AGG | - | chr8.3:14171106-14171125 | None:intergenic | 30.0% |
| ! | TTTGGTCTTCAAGATATGTT+AGG | + | chr8.3:14171337-14171356 | MS.gene038752:CDS | 30.0% |
| AAGCTACTCTCAAAAAGCTA+AGG | + | chr8.3:14171849-14171868 | MS.gene038752:CDS | 35.0% | |
| AAGGACAGAGGAAAAAAAGA+AGG | + | chr8.3:14171642-14171661 | MS.gene038752:CDS | 35.0% | |
| AATCAACATCATGTTGTTGG+AGG | - | chr8.3:14171066-14171085 | None:intergenic | 35.0% | |
| AATCAGCTTCACATGATCAA+AGG | - | chr8.3:14171809-14171828 | None:intergenic | 35.0% | |
| ACCAATCCATGGAAAAAACT+TGG | + | chr8.3:14172074-14172093 | MS.gene038752:CDS | 35.0% | |
| AGAGAATTGAACATCATAGG+TGG | - | chr8.3:14171925-14171944 | None:intergenic | 35.0% | |
| AGATTCTTCCACACTTTCAA+AGG | - | chr8.3:14171746-14171765 | None:intergenic | 35.0% | |
| ATTCTTCCACACTTTCAAAG+GGG | - | chr8.3:14171744-14171763 | None:intergenic | 35.0% | |
| CCAATCCATGGAAAAAACTT+GGG | + | chr8.3:14172075-14172094 | MS.gene038752:CDS | 35.0% | |
| GATTCTTCCACACTTTCAAA+GGG | - | chr8.3:14171745-14171764 | None:intergenic | 35.0% | |
| GCTTTGATTGTTGAGTTTGA+AGG | - | chr8.3:14171151-14171170 | None:intergenic | 35.0% | |
| GGAAATCAACATCATGTTGT+TGG | - | chr8.3:14171069-14171088 | None:intergenic | 35.0% | |
| GGAACAAAAAGGTGATTTAG+AGG | - | chr8.3:14170909-14170928 | None:intergenic | 35.0% | |
| GGGAATTGAAAGAAACAGAA+AGG | - | chr8.3:14170995-14171014 | None:intergenic | 35.0% | |
| GTAGAGAAAAAGCAAGAGAA+AGG | + | chr8.3:14171611-14171630 | MS.gene038752:CDS | 35.0% | |
| GTGATTTAGAGGAAAATGCT+AGG | - | chr8.3:14170898-14170917 | None:intergenic | 35.0% | |
| GTTTGATCTCAAGTTTGGAT+TGG | - | chr8.3:14171402-14171421 | None:intergenic | 35.0% | |
| TCAACTTCTGAATGTACTGA+AGG | + | chr8.3:14171469-14171488 | MS.gene038752:CDS | 35.0% | |
| TCAAGCTTGGATAATGAAGT+TGG | + | chr8.3:14171496-14171515 | MS.gene038752:CDS | 35.0% | |
| TGAAAAAGCAAGCAAAACAG+TGG | + | chr8.3:14171363-14171382 | MS.gene038752:CDS | 35.0% | |
| TGAAAGGGATCAATATCATC+AGG | - | chr8.3:14171025-14171044 | None:intergenic | 35.0% | |
| TGAACAATTTCACCAATCCA+TGG | + | chr8.3:14172063-14172082 | MS.gene038752:CDS | 35.0% | |
| TTATTCATCATCACAACAGG+TGG | - | chr8.3:14171103-14171122 | None:intergenic | 35.0% | |
| ! | AAGGTGTTTGATCTCAAGTT+TGG | - | chr8.3:14171407-14171426 | None:intergenic | 35.0% |
| ! | ATGCTAGGTTATTTCCATTG+AGG | - | chr8.3:14170883-14170902 | None:intergenic | 35.0% |
| ! | GTTGAAGATGCACTTTTAGT+AGG | - | chr8.3:14171454-14171473 | None:intergenic | 35.0% |
| ! | TGAAGTTGAGTTGCTTTCAA+AGG | - | chr8.3:14170930-14170949 | None:intergenic | 35.0% |
| ! | TGCTAGGTTATTTCCATTGA+GGG | - | chr8.3:14170882-14170901 | None:intergenic | 35.0% |
| !!! | GAAGTTGCAAAGAGGTTTTT+TGG | + | chr8.3:14171319-14171338 | MS.gene038752:CDS | 35.0% |
| AAGAAACAGAAAGGAGGAAG+AGG | - | chr8.3:14170986-14171005 | None:intergenic | 40.0% | |
| AGCTTCACATGATCAAAGGA+AGG | - | chr8.3:14171805-14171824 | None:intergenic | 40.0% | |
| ATCCATGGAAAAAACTTGGG+AGG | + | chr8.3:14172078-14172097 | MS.gene038752:CDS | 40.0% | |
| CATGTTGTTGGAGGAAGATT+TGG | - | chr8.3:14171057-14171076 | None:intergenic | 40.0% | |
| TACTGAAGGAGTTTCAAGCT+TGG | + | chr8.3:14171483-14171502 | MS.gene038752:CDS | 40.0% | |
| TCAACAAACAGTTCCCTCAA+TGG | + | chr8.3:14170866-14170885 | MS.gene038752:CDS | 40.0% | |
| TCATGTGAAGCTGATTGATG+AGG | + | chr8.3:14171813-14171832 | MS.gene038752:CDS | 40.0% | |
| TGGTAAAGGCAAAACTGTAG+TGG | + | chr8.3:14171198-14171217 | MS.gene038752:CDS | 40.0% | |
| TTTCAAAGGGGTTCCAAATG+AGG | - | chr8.3:14171732-14171751 | None:intergenic | 40.0% | |
| ! | ATTTGGTGGCTGTCTTGAAA+GGG | - | chr8.3:14171040-14171059 | None:intergenic | 40.0% |
| ! | TGTCACTTGAAGTTGCAAAG+AGG | + | chr8.3:14171311-14171330 | MS.gene038752:CDS | 40.0% |
| !! | ACAGTACTGATCATCATCAG+CGG | + | chr8.3:14171125-14171144 | MS.gene038752:CDS | 40.0% |
| !!! | CCCAAGTTTTTTCCATGGAT+TGG | - | chr8.3:14172078-14172097 | None:intergenic | 40.0% |
| AAGCAAGCAAAACAGTGGAC+TGG | + | chr8.3:14171368-14171387 | MS.gene038752:CDS | 45.0% | |
| ACAGAAAGGAGGAAGAGGAA+AGG | - | chr8.3:14170981-14171000 | None:intergenic | 45.0% | |
| AGAAAGGAGGAAGAGGAAAG+GGG | - | chr8.3:14170979-14170998 | None:intergenic | 45.0% | |
| AGCAAGATCAAAACCGCGAA+AGG | + | chr8.3:14171265-14171284 | MS.gene038752:CDS | 45.0% | |
| CAAAACCGCGAAAGGACTAA+GGG | + | chr8.3:14171273-14171292 | MS.gene038752:CDS | 45.0% | |
| CAACAGGTGGATGATGAAGT+TGG | - | chr8.3:14171090-14171109 | None:intergenic | 45.0% | |
| CAAGAGAAAGGGCAAGAGAA+AGG | + | chr8.3:14171623-14171642 | MS.gene038752:CDS | 45.0% | |
| CAGAAAGGAGGAAGAGGAAA+GGG | - | chr8.3:14170980-14170999 | None:intergenic | 45.0% | |
| GTTGTTGGAGGAAGATTTGG+TGG | - | chr8.3:14171054-14171073 | None:intergenic | 45.0% | |
| TCAAAACCGCGAAAGGACTA+AGG | + | chr8.3:14171272-14171291 | MS.gene038752:CDS | 45.0% | |
| ! | GAAAGTGTGGAAGAATCTGC+AGG | + | chr8.3:14171748-14171767 | MS.gene038752:CDS | 45.0% |
| ! | GGTACACATCAGAGTACTCA+AGG | + | chr8.3:14171769-14171788 | MS.gene038752:CDS | 45.0% |
| ! | TTGGAACCCCTTTGAAAGTG+TGG | + | chr8.3:14171735-14171754 | MS.gene038752:CDS | 45.0% |
| !! | CGGTTTTGATCTTGCTGTGT+CGG | - | chr8.3:14171261-14171280 | None:intergenic | 45.0% |
| !! | GATTTGGTGGCTGTCTTGAA+AGG | - | chr8.3:14171041-14171060 | None:intergenic | 45.0% |
| !!! | TGCCTCCCAAGTTTTTTCCA+TGG | - | chr8.3:14172083-14172102 | None:intergenic | 45.0% |
| AAGGGCAAGAGAAAGGACAG+AGG | + | chr8.3:14171630-14171649 | MS.gene038752:CDS | 50.0% | |
| AATCTTCTTCCTGCAGCTGC+TGG | + | chr8.3:14171178-14171197 | MS.gene038752:CDS | 50.0% | |
| GAAAGGAGGAAGAGGAAAGG+GGG | - | chr8.3:14170978-14170997 | None:intergenic | 50.0% | |
| CCGATCCCTTAGTCCTTTCG+CGG | - | chr8.3:14171281-14171300 | None:intergenic | 55.0% | |
| CCGCGAAAGGACTAAGGGAT+CGG | + | chr8.3:14171278-14171297 | MS.gene038752:CDS | 55.0% | |
| CTTCCTGCAGCTGCTGGTAA+AGG | + | chr8.3:14171184-14171203 | MS.gene038752:CDS | 55.0% | |
| TTGCCTTTACCAGCAGCTGC+AGG | - | chr8.3:14171190-14171209 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 14170860 | 14172120 | 14170860 | ID=MS.gene038752 |
| chr8.3 | mRNA | 14170860 | 14172120 | 14170860 | ID=MS.gene038752.t1;Parent=MS.gene038752 |
| chr8.3 | exon | 14170860 | 14171960 | 14170860 | ID=MS.gene038752.t1.exon1;Parent=MS.gene038752.t1 |
| chr8.3 | CDS | 14170860 | 14171960 | 14170860 | ID=cds.MS.gene038752.t1;Parent=MS.gene038752.t1 |
| chr8.3 | exon | 14172055 | 14172120 | 14172055 | ID=MS.gene038752.t1.exon2;Parent=MS.gene038752.t1 |
| chr8.3 | CDS | 14172055 | 14172120 | 14172055 | ID=cds.MS.gene038752.t1;Parent=MS.gene038752.t1 |
| Gene Sequence |
| Protein sequence |
