AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038821

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038821.t1 MTR_4g109980 95.312 128 4 1 44 171 38 163 1.57e-64 201
MS.gene038821.t1 MTR_2g059540 63.000 100 37 0 46 145 31 130 5.01e-36 124
MS.gene038821.t1 MTR_2g096740 63.043 92 25 1 46 137 62 144 3.76e-35 124
MS.gene038821.t1 MTR_2g096740 63.043 92 25 1 46 137 77 159 5.19e-35 124
MS.gene038821.t1 MTR_4g088580 59.048 105 41 2 26 129 34 137 1.64e-34 124
MS.gene038821.t1 MTR_8g479350 82.759 58 10 0 42 99 64 121 3.82e-33 120
MS.gene038821.t1 MTR_8g015840 80.000 65 12 1 43 106 17 81 7.83e-33 116
MS.gene038821.t1 MTR_4g063780 69.565 69 21 0 45 113 74 142 3.37e-32 117
MS.gene038821.t1 MTR_8g079060 60.759 79 31 0 43 121 26 104 1.57e-31 113
MS.gene038821.t1 MTR_7g059400 48.305 118 43 2 41 158 71 170 2.97e-31 115
MS.gene038821.t1 MTR_4g022370 46.512 129 55 2 25 139 54 182 3.85e-31 115
MS.gene038821.t1 MTR_8g068210 70.833 72 18 1 45 113 31 102 4.25e-31 115
MS.gene038821.t1 MTR_5g031440 83.333 54 9 0 43 96 40 93 9.21e-31 114
MS.gene038821.t1 MTR_4g461080 85.455 55 8 0 44 98 27 81 1.19e-30 112
MS.gene038821.t1 MTR_7g024670 82.456 57 10 0 47 103 78 134 1.37e-30 114
MS.gene038821.t1 MTR_3g077750 56.000 100 38 1 29 128 50 143 1.39e-30 113
MS.gene038821.t1 MTR_2g093220 56.863 102 44 0 43 144 37 138 1.81e-30 112
MS.gene038821.t1 MTR_3g091820 64.865 74 20 1 29 102 32 99 1.99e-30 112
MS.gene038821.t1 MTR_2g014060 86.275 51 7 0 47 97 26 76 1.06e-29 111
MS.gene038821.t1 MTR_8g027295 53.191 94 36 1 27 120 13 98 3.79e-29 108
MS.gene038821.t1 MTR_3g090430 84.906 53 8 0 48 100 53 105 6.29e-29 109
MS.gene038821.t1 MTR_1g077600 71.186 59 17 0 43 101 40 98 2.47e-28 106
MS.gene038821.t1 MTR_1g077600 72.414 58 16 0 43 100 40 97 2.79e-28 106
MS.gene038821.t1 MTR_1g056810 77.966 59 13 0 42 100 8 66 3.55e-28 106
MS.gene038821.t1 MTR_7g086780 46.316 95 51 0 44 138 97 191 5.64e-28 108
MS.gene038821.t1 MTR_7g010950 72.414 58 16 0 45 102 134 191 8.18e-28 108
MS.gene038821.t1 MTR_8g044220 68.966 58 18 0 44 101 116 173 1.43e-27 107
MS.gene038821.t1 MTR_4g089095 76.667 60 13 1 44 103 48 106 1.48e-27 104
MS.gene038821.t1 MTR_4g089095 76.667 60 13 1 44 103 14 72 1.56e-27 103
MS.gene038821.t1 MTR_2g013370 70.769 65 18 1 36 100 36 99 1.75e-27 104
MS.gene038821.t1 MTR_2g016030 63.077 65 24 0 35 99 36 100 2.20e-27 100
MS.gene038821.t1 MTR_2g014170 85.714 49 7 0 46 94 45 93 2.33e-27 104
MS.gene038821.t1 MTR_6g012450 67.797 59 19 0 44 102 134 192 1.58e-26 104
MS.gene038821.t1 MTR_6g027460 46.000 100 50 1 44 143 94 189 6.22e-26 101
MS.gene038821.t1 MTR_4g082060 65.000 60 21 0 43 102 119 178 9.79e-26 102
MS.gene038821.t1 MTR_3g435480 58.904 73 23 1 37 102 120 192 1.89e-25 101
MS.gene038821.t1 MTR_5g041420 67.797 59 19 0 44 102 136 194 3.67e-25 99.0
MS.gene038821.t1 MTR_6g027450 63.158 57 21 0 44 100 87 143 1.44e-24 97.4
MS.gene038821.t1 MTR_5g041530 69.091 55 17 0 45 99 139 193 3.58e-24 97.1
MS.gene038821.t1 MTR_5g041380 59.459 74 28 1 44 115 125 198 4.09e-24 97.1
MS.gene038821.t1 MTR_5g041400 66.102 59 20 0 44 102 117 175 7.07e-24 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038821.t1 AT5G60850 74.444 90 22 1 29 118 34 122 2.77e-42 143
MS.gene038821.t1 AT1G51700 76.712 73 16 1 43 114 30 102 5.86e-35 121
MS.gene038821.t1 AT5G65590 75.758 66 16 0 42 107 37 102 9.79e-34 121
MS.gene038821.t1 AT5G66940 52.727 110 40 2 25 128 17 120 1.34e-33 119
MS.gene038821.t1 AT5G60200 52.212 113 41 2 45 150 54 160 2.65e-33 119
MS.gene038821.t1 AT3G45610 66.234 77 19 1 43 119 37 106 2.05e-32 116
MS.gene038821.t1 AT1G07640 79.310 58 12 0 46 103 21 78 1.35e-31 115
MS.gene038821.t1 AT2G37590 68.116 69 22 0 33 101 76 144 1.52e-31 116
MS.gene038821.t1 AT1G07640 79.310 58 12 0 46 103 77 134 1.99e-31 115
MS.gene038821.t1 AT1G07640 79.310 58 12 0 46 103 85 142 2.57e-31 115
MS.gene038821.t1 AT2G28510 79.032 62 13 0 41 102 43 104 3.18e-31 114
MS.gene038821.t1 AT2G28810 83.019 53 9 0 45 97 76 128 5.37e-31 114
MS.gene038821.t1 AT2G28810 83.019 53 9 0 45 97 93 145 9.01e-31 114
MS.gene038821.t1 AT4G38000 81.481 54 10 0 43 96 38 91 1.01e-30 112
MS.gene038821.t1 AT3G50410 77.049 61 14 0 43 103 27 87 1.06e-30 112
MS.gene038821.t1 AT3G21270 88.679 53 6 0 46 98 29 81 1.12e-30 110
MS.gene038821.t1 AT3G61850 73.134 67 18 0 43 109 59 125 1.30e-30 112
MS.gene038821.t1 AT3G61850 73.134 67 18 0 43 109 59 125 1.30e-30 112
MS.gene038821.t1 AT3G52440 69.737 76 19 2 38 112 16 88 1.38e-30 111
MS.gene038821.t1 AT3G61850 73.134 67 18 0 43 109 71 137 1.56e-30 112
MS.gene038821.t1 AT3G52440 69.737 76 19 2 38 112 35 107 1.86e-30 111
MS.gene038821.t1 AT3G61850 73.134 67 18 0 43 109 59 125 2.25e-30 112
MS.gene038821.t1 AT3G61850 73.134 67 18 0 43 109 71 137 2.36e-30 112
MS.gene038821.t1 AT3G55370 69.118 68 21 0 41 108 71 138 2.45e-30 112
MS.gene038821.t1 AT3G55370 69.118 68 21 0 41 108 71 138 3.29e-30 113
MS.gene038821.t1 AT4G21050 55.882 102 38 2 48 143 26 126 3.55e-30 109
MS.gene038821.t1 AT3G55370 69.118 68 21 0 41 108 116 183 4.96e-30 112
MS.gene038821.t1 AT1G28310 52.885 104 46 1 46 149 27 127 5.42e-30 111
MS.gene038821.t1 AT5G02460 75.000 60 15 0 41 100 90 149 7.73e-30 112
MS.gene038821.t1 AT4G24060 63.514 74 21 1 27 100 40 107 1.12e-29 111
MS.gene038821.t1 AT1G28310 52.885 104 46 1 46 149 51 151 1.14e-29 111
MS.gene038821.t1 AT5G62940 69.565 69 15 1 28 96 61 123 5.73e-29 110
MS.gene038821.t1 AT1G21340 80.357 56 11 0 48 103 40 95 6.03e-29 107
MS.gene038821.t1 AT4G00940 64.103 78 28 0 43 120 65 142 2.02e-27 104
MS.gene038821.t1 AT4G00940 64.103 78 28 0 43 120 65 142 2.02e-27 104
MS.gene038821.t1 AT4G00940 64.103 78 28 0 43 120 65 142 2.02e-27 104
MS.gene038821.t1 AT2G34140 71.429 56 16 0 44 99 56 111 7.78e-27 100
MS.gene038821.t1 AT1G29160 71.429 56 16 0 44 99 60 115 1.07e-26 99.8
MS.gene038821.t1 AT1G64620 61.194 67 20 1 29 95 38 98 1.10e-26 103
MS.gene038821.t1 AT3G47500 69.492 59 18 0 44 102 108 166 1.56e-26 104
MS.gene038821.t1 AT2G46590 65.152 66 15 1 28 93 58 115 5.80e-26 101
MS.gene038821.t1 AT2G46590 65.152 66 15 1 28 93 70 127 6.66e-26 101
MS.gene038821.t1 AT5G39660 69.643 56 17 0 44 99 136 191 7.28e-26 102
MS.gene038821.t1 AT5G39660 69.643 56 17 0 44 99 136 191 7.28e-26 102
MS.gene038821.t1 AT5G39660 69.643 56 17 0 44 99 136 191 7.28e-26 102
MS.gene038821.t1 AT5G62430 64.407 59 21 0 44 102 52 110 2.08e-25 99.4
MS.gene038821.t1 AT1G69570 44.144 111 53 2 44 145 130 240 2.64e-25 100
MS.gene038821.t1 AT1G47655 74.510 51 13 0 44 94 27 77 5.73e-25 96.3
MS.gene038821.t1 AT1G26790 66.071 56 19 0 44 99 109 164 3.49e-24 97.1
MS.gene038821.t1 AT4G21040 60.000 70 27 1 48 116 27 96 6.23e-24 94.0
MS.gene038821.t1 AT4G21080 68.966 58 17 1 48 104 27 84 7.65e-23 91.7
MS.gene038821.t1 AT4G21030 55.882 68 27 1 48 115 23 87 1.20e-16 73.9

Find 59 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTATTCTCCGGCGCTTC+AGG 0.228152 8.3:-14936256 None:intergenic
GTTATTGTAGTAACAGAATT+TGG 0.266870 8.3:-14936065 None:intergenic
TGCTAGAGCGCTTGGATTTA+CGG 0.277209 8.3:-14936183 None:intergenic
GAGGACATTTCATGACTTCT+TGG 0.313571 8.3:-14936024 None:intergenic
GGTTGAGGTTATTGTTGTTT+TGG 0.331274 8.3:-14936003 None:intergenic
GTAACAGAATTTGGTGTTGA+TGG 0.387408 8.3:-14936056 None:intergenic
TTCTTCTCCGGCGGTGGCGT+TGG 0.410739 8.3:-14936346 None:intergenic
CACCGCAGCGGCGGTGAGGC+TGG 0.433116 8.3:-14936305 None:intergenic
GGTTCCTCCGGCGCCTCCGA+TGG 0.440934 8.3:-14935936 None:intergenic
GCCTCCGCCACCGAAGAATC+TGG 0.443448 8.3:-14935957 None:intergenic
CACCACCGACGGGGACGTTA+CGG 0.448726 8.3:-14936156 None:intergenic
GGCGCTTCAGGTGGAGTTGT+CGG 0.452335 8.3:-14936244 None:intergenic
TCCGGCGCCTCCGATGGAAC+CGG 0.454317 8.3:-14935930 None:intergenic
TCGGTGGCGGAGGCGGTGAT+CGG 0.459343 8.3:+14935966 MS.gene038821:CDS
CGTAACGTCCCCGTCGGTGG+TGG 0.462292 8.3:+14936157 MS.gene038821:CDS
CAGCCTCACCGCCGCTGCGG+TGG 0.464633 8.3:+14936306 MS.gene038821:CDS
AGATTCTTCGGTGGCGGAGG+CGG 0.473172 8.3:+14935959 MS.gene038821:CDS
GCCGGAGGAACCAGATTCTT+CGG 0.474219 8.3:+14935947 MS.gene038821:CDS
ATCGGAGGCGCCGGTTCCAT+CGG 0.474940 8.3:+14935920 MS.gene038821:CDS
GGAACTCTCACTGCTGGAAT+GGG 0.482309 8.3:-14936284 None:intergenic
ATTTCATGACTTCTTGGTTG+AGG 0.488573 8.3:-14936018 None:intergenic
TGGAACTCTCACTGCTGGAA+TGG 0.493236 8.3:-14936285 None:intergenic
GATACACTTGAACAAGGAAC+AGG 0.494740 8.3:+14936391 MS.gene038821:CDS
ACCAGATTCTTCGGTGGCGG+AGG 0.500004 8.3:+14935956 MS.gene038821:CDS
GCCGGTTCCATCGGAGGCGC+CGG 0.505061 8.3:+14935929 MS.gene038821:CDS
ACCGAAGAATCTGGTTCCTC+CGG 0.507560 8.3:-14935948 None:intergenic
GATGGAACCGGCGCCTCCGA+TGG 0.508707 8.3:-14935918 None:intergenic
GAGGCTGGAACTCTCACTGC+TGG 0.519133 8.3:-14936290 None:intergenic
TTATTCTCCGGCGCTTCAGG+TGG 0.526287 8.3:-14936253 None:intergenic
GACAACTCCACCTGAAGCGC+CGG 0.527662 8.3:+14936246 MS.gene038821:CDS
CAACATTCCATCGGAGGCGC+CGG 0.528845 8.3:+14935911 MS.gene038821:CDS
TTCAGAACCAACGCCACCGC+CGG 0.531563 8.3:+14936339 MS.gene038821:CDS
CTCCGTAACGTCCCCGTCGG+TGG 0.533383 8.3:+14936154 MS.gene038821:CDS
CAGCCACCGCAGCGGCGGTG+AGG 0.533594 8.3:-14936309 None:intergenic
TTACGGCAACCACCACCGAC+GGG 0.536158 8.3:-14936166 None:intergenic
TGTCGCCGTTACTGGACTAA+AGG 0.541828 8.3:+14936124 MS.gene038821:CDS
GGTTCCATCGGAGGCGCCGG+AGG 0.555949 8.3:+14935932 MS.gene038821:CDS
CGCCGTTACTGGACTAAAGG+TGG 0.567195 8.3:+14936127 MS.gene038821:CDS
TGGGAGTTAGACTTATTCTC+CGG 0.569296 8.3:-14936265 None:intergenic
CGGTAAAACAGTGGAATCTG+AGG 0.581795 8.3:-14936224 None:intergenic
TTTACGGCAACCACCACCGA+CGG 0.585674 8.3:-14936167 None:intergenic
GTCCTCCGTAACGTCCCCGT+CGG 0.585856 8.3:+14936151 MS.gene038821:CDS
TGTTTCAGCCACCGCAGCGG+CGG 0.589914 8.3:-14936314 None:intergenic
TTCCAGCCTCACCGCCGCTG+CGG 0.594936 8.3:+14936303 MS.gene038821:CDS
GGAACCAGATTCTTCGGTGG+CGG 0.595461 8.3:+14935953 MS.gene038821:CDS
GGAGGCGCCGGTTCCATCGG+AGG 0.600395 8.3:+14935923 MS.gene038821:CDS
AGAAGTGACGAGGCTGAGAG+AGG 0.604907 8.3:-14936093 None:intergenic
CACCACCTTTAGTCCAGTAA+CGG 0.616696 8.3:-14936129 None:intergenic
GAGATACAACATTCCATCGG+AGG 0.634291 8.3:+14935905 MS.gene038821:CDS
GAGAAAGATACACTTGAACA+AGG 0.648756 8.3:+14936385 MS.gene038821:CDS
CACCGACGGGGACGTTACGG+AGG 0.650876 8.3:-14936153 None:intergenic
AACTGTTTCAGCCACCGCAG+CGG 0.652527 8.3:-14936317 None:intergenic
TACGGCAACCACCACCGACG+GGG 0.654053 8.3:-14936165 None:intergenic
TAAAACAGTGGAATCTGAGG+AGG 0.660488 8.3:-14936221 None:intergenic
CCGGAGAAGAAAATCAACAA+AGG 0.666094 8.3:+14936358 MS.gene038821:CDS
CAGGAGATACAACATTCCAT+CGG 0.667929 8.3:+14935902 MS.gene038821:CDS
TGGAGTTGTCGGTAAAACAG+TGG 0.668985 8.3:-14936233 None:intergenic
GGAGGAACCAGATTCTTCGG+TGG 0.672184 8.3:+14935950 MS.gene038821:CDS
GTGTTGATGGAGTCACAGCG+AGG 0.726737 8.3:-14936043 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! GTTATTGTAGTAACAGAATT+TGG - chr8.3:14936068-14936087 None:intergenic 25.0%
ATTTCATGACTTCTTGGTTG+AGG - chr8.3:14936021-14936040 None:intergenic 35.0%
GAGAAAGATACACTTGAACA+AGG + chr8.3:14936385-14936404 MS.gene038821:CDS 35.0%
!! GTAACAGAATTTGGTGTTGA+TGG - chr8.3:14936059-14936078 None:intergenic 35.0%
!!! AGGTTATTGTTGTTTTGGTC+GGG - chr8.3:14936001-14936020 None:intergenic 35.0%
!!! CCTTTGTTGATTTTCTTCTC+CGG - chr8.3:14936361-14936380 None:intergenic 35.0%
!!! GAGGTTATTGTTGTTTTGGT+CGG - chr8.3:14936002-14936021 None:intergenic 35.0%
!!! GGTTGAGGTTATTGTTGTTT+TGG - chr8.3:14936006-14936025 None:intergenic 35.0%
!!! TCTGAGGAGGAAGATTTTTT+TGG - chr8.3:14936211-14936230 None:intergenic 35.0%
CAGGAGATACAACATTCCAT+CGG + chr8.3:14935902-14935921 MS.gene038821:CDS 40.0%
CCGGAGAAGAAAATCAACAA+AGG + chr8.3:14936358-14936377 MS.gene038821:CDS 40.0%
GAGGACATTTCATGACTTCT+TGG - chr8.3:14936027-14936046 None:intergenic 40.0%
TAAAACAGTGGAATCTGAGG+AGG - chr8.3:14936224-14936243 None:intergenic 40.0%
TGGGAGTTAGACTTATTCTC+CGG - chr8.3:14936268-14936287 None:intergenic 40.0%
!!! TTGTTGATTTTCTTCTCCGG+CGG - chr8.3:14936358-14936377 None:intergenic 40.0%
CACCACCTTTAGTCCAGTAA+CGG - chr8.3:14936132-14936151 None:intergenic 45.0%
CGGTAAAACAGTGGAATCTG+AGG - chr8.3:14936227-14936246 None:intergenic 45.0%
GAGATACAACATTCCATCGG+AGG + chr8.3:14935905-14935924 MS.gene038821:CDS 45.0%
TGGAGTTGTCGGTAAAACAG+TGG - chr8.3:14936236-14936255 None:intergenic 45.0%
! CAGTTTTTGCAGAAGTGACG+AGG - chr8.3:14936106-14936125 None:intergenic 45.0%
! TGCTAGAGCGCTTGGATTTA+CGG - chr8.3:14936186-14936205 None:intergenic 45.0%
!!! TTTTGGTTTGCTAGAGCGCT+TGG - chr8.3:14936194-14936213 None:intergenic 45.0%
GCAAAAACTGTCGCCGTTAC+TGG + chr8.3:14936116-14936135 MS.gene038821:CDS 50.0%
GGAACTCTCACTGCTGGAAT+GGG - chr8.3:14936287-14936306 None:intergenic 50.0%
TGGAACTCTCACTGCTGGAA+TGG - chr8.3:14936288-14936307 None:intergenic 50.0%
TGTCGCCGTTACTGGACTAA+AGG + chr8.3:14936124-14936143 MS.gene038821:CDS 50.0%
! ACCGAAGAATCTGGTTCCTC+CGG - chr8.3:14935951-14935970 None:intergenic 50.0%
! TTGATTTTCTTCTCCGGCGG+TGG - chr8.3:14936355-14936374 None:intergenic 50.0%
AACTGTTTCAGCCACCGCAG+CGG - chr8.3:14936320-14936339 None:intergenic 55.0%
AGAAGTGACGAGGCTGAGAG+AGG - chr8.3:14936096-14936115 None:intergenic 55.0%
CGCCGTTACTGGACTAAAGG+TGG + chr8.3:14936127-14936146 MS.gene038821:CDS 55.0%
GACTTATTCTCCGGCGCTTC+AGG - chr8.3:14936259-14936278 None:intergenic 55.0%
GCCGGAGGAACCAGATTCTT+CGG + chr8.3:14935947-14935966 MS.gene038821:CDS 55.0%
GGAACCAGATTCTTCGGTGG+CGG + chr8.3:14935953-14935972 MS.gene038821:CDS 55.0%
GGAGGAACCAGATTCTTCGG+TGG + chr8.3:14935950-14935969 MS.gene038821:CDS 55.0%
TTATTCTCCGGCGCTTCAGG+TGG - chr8.3:14936256-14936275 None:intergenic 55.0%
TTTACGGCAACCACCACCGA+CGG - chr8.3:14936170-14936189 None:intergenic 55.0%
! GTGTTGATGGAGTCACAGCG+AGG - chr8.3:14936046-14936065 None:intergenic 55.0%
GACAACTCCACCTGAAGCGC+CGG + chr8.3:14936246-14936265 MS.gene038821:CDS 60.0%
GAGGCTGGAACTCTCACTGC+TGG - chr8.3:14936293-14936312 None:intergenic 60.0%
GGCGCTTCAGGTGGAGTTGT+CGG - chr8.3:14936247-14936266 None:intergenic 60.0%
TTACGGCAACCACCACCGAC+GGG - chr8.3:14936169-14936188 None:intergenic 60.0%
TTCAGAACCAACGCCACCGC+CGG + chr8.3:14936339-14936358 MS.gene038821:CDS 60.0%
! ACCAGATTCTTCGGTGGCGG+AGG + chr8.3:14935956-14935975 MS.gene038821:CDS 60.0%
! CAACATTCCATCGGAGGCGC+CGG + chr8.3:14935911-14935930 MS.gene038821:CDS 60.0%
!! AGATTCTTCGGTGGCGGAGG+CGG + chr8.3:14935959-14935978 MS.gene038821:CDS 60.0%
CACCACCGACGGGGACGTTA+CGG - chr8.3:14936159-14936178 None:intergenic 65.0%
GCCTCCGCCACCGAAGAATC+TGG - chr8.3:14935960-14935979 None:intergenic 65.0%
GTCCTCCGTAACGTCCCCGT+CGG + chr8.3:14936151-14936170 MS.gene038821:CDS 65.0%
TACGGCAACCACCACCGACG+GGG - chr8.3:14936168-14936187 None:intergenic 65.0%
TGTTTCAGCCACCGCAGCGG+CGG - chr8.3:14936317-14936336 None:intergenic 65.0%
TTCTTCTCCGGCGGTGGCGT+TGG - chr8.3:14936349-14936368 None:intergenic 65.0%
!! ATCGGAGGCGCCGGTTCCAT+CGG + chr8.3:14935920-14935939 MS.gene038821:CDS 65.0%
CACCGACGGGGACGTTACGG+AGG - chr8.3:14936156-14936175 None:intergenic 70.0%
CGTAACGTCCCCGTCGGTGG+TGG + chr8.3:14936157-14936176 MS.gene038821:CDS 70.0%
CTCCGTAACGTCCCCGTCGG+TGG + chr8.3:14936154-14936173 MS.gene038821:CDS 70.0%
GATGGAACCGGCGCCTCCGA+TGG - chr8.3:14935921-14935940 None:intergenic 70.0%
TCCGGCGCCTCCGATGGAAC+CGG - chr8.3:14935933-14935952 None:intergenic 70.0%
TTCCAGCCTCACCGCCGCTG+CGG + chr8.3:14936303-14936322 MS.gene038821:CDS 70.0%
!! TCGGTGGCGGAGGCGGTGAT+CGG + chr8.3:14935966-14935985 MS.gene038821:CDS 70.0%
GGTTCCTCCGGCGCCTCCGA+TGG - chr8.3:14935939-14935958 None:intergenic 75.0%
! GCCGGTTCCATCGGAGGCGC+CGG + chr8.3:14935929-14935948 MS.gene038821:CDS 75.0%
!! GGAGGCGCCGGTTCCATCGG+AGG + chr8.3:14935923-14935942 MS.gene038821:CDS 75.0%
!! GGTTCCATCGGAGGCGCCGG+AGG + chr8.3:14935932-14935951 MS.gene038821:CDS 75.0%
! CACCGCAGCGGCGGTGAGGC+TGG - chr8.3:14936308-14936327 None:intergenic 80.0%
! CAGCCACCGCAGCGGCGGTG+AGG - chr8.3:14936312-14936331 None:intergenic 80.0%
! CAGCCTCACCGCCGCTGCGG+TGG + chr8.3:14936306-14936325 MS.gene038821:CDS 80.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 14935899 14936412 14935899 ID=MS.gene038821
chr8.3 mRNA 14935899 14936412 14935899 ID=MS.gene038821.t1;Parent=MS.gene038821
chr8.3 exon 14935899 14936412 14935899 ID=MS.gene038821.t1.exon1;Parent=MS.gene038821.t1
chr8.3 CDS 14935899 14936412 14935899 ID=cds.MS.gene038821.t1;Parent=MS.gene038821.t1
Gene Sequence

>MS.gene038821

ATGCAGGAGATACAACATTCCATCGGAGGCGCCGGTTCCATCGGAGGCGCCGGAGGAACCAGATTCTTCGGTGGCGGAGGCGGTGATCGGCGTCTCAGACCCGACCAAAACAACAATAACCTCAACCAAGAAGTCATGAAATGTCCTCGCTGTGACTCCATCAACACCAAATTCTGTTACTACAATAACTACAACCTCTCTCAGCCTCGTCACTTCTGCAAAAACTGTCGCCGTTACTGGACTAAAGGTGGTGTCCTCCGTAACGTCCCCGTCGGTGGTGGTTGCCGTAAATCCAAGCGCTCTAGCAAACCAAAAAAATCTTCCTCCTCAGATTCCACTGTTTTACCGACAACTCCACCTGAAGCGCCGGAGAATAAGTCTAACTCCCATTCCAGCAGTGAGAGTTCCAGCCTCACCGCCGCTGCGGTGGCTGAAACAGTTTCAGAACCAACGCCACCGCCGGAGAAGAAAATCAACAAAGGCTTTGAGAAAGATACACTTGAACAAGGAACAG
Protein sequence

>MS.gene038821.t1

MQEIQHSIGGAGSIGGAGGTRFFGGGGGDRRLRPDQNNNNLNQEVMKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSKPKKSSSSDSTVLPTTPPEAPENKSNSHSSSESSSLTAAAVAETVSEPTPPPEKKINKGFEKDTLEQGT