Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038895.t1 | RHN74120.1 | 98.2 | 503 | 7 | 1 | 1 | 503 | 1 | 501 | 1.40E-272 | 948.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038895.t1 | Q8S4W7 | 46.0 | 570 | 220 | 10 | 8 | 498 | 26 | 586 | 4.7e-128 | 459.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038895.t1 | A0A396J7P5 | 98.2 | 503 | 7 | 1 | 1 | 503 | 1 | 501 | 1.0e-272 | 948.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene038895.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038895.t1 | MTR_3g065980 | 46.939 | 539 | 210 | 12 | 16 | 489 | 13 | 540 | 2.30e-158 | 461 |
MS.gene038895.t1 | MTR_7g027190 | 42.105 | 399 | 190 | 9 | 117 | 489 | 290 | 673 | 4.80e-92 | 295 |
MS.gene038895.t1 | MTR_4g133660 | 33.562 | 438 | 267 | 11 | 67 | 488 | 113 | 542 | 8.29e-69 | 230 |
MS.gene038895.t1 | MTR_2g082090 | 36.990 | 392 | 220 | 10 | 116 | 488 | 195 | 578 | 2.55e-67 | 227 |
MS.gene038895.t1 | MTR_8g442410 | 35.661 | 401 | 214 | 13 | 119 | 493 | 147 | 529 | 2.02e-66 | 223 |
MS.gene038895.t1 | MTR_5g094450 | 36.272 | 397 | 216 | 13 | 116 | 489 | 150 | 532 | 7.14e-66 | 222 |
MS.gene038895.t1 | MTR_4g102790 | 35.641 | 390 | 221 | 9 | 121 | 491 | 286 | 664 | 1.58e-65 | 224 |
MS.gene038895.t1 | MTR_3g056110 | 38.287 | 397 | 204 | 14 | 116 | 489 | 164 | 542 | 2.09e-65 | 221 |
MS.gene038895.t1 | MTR_5g097480 | 36.340 | 388 | 216 | 12 | 120 | 489 | 170 | 544 | 2.17e-64 | 218 |
MS.gene038895.t1 | MTR_1g029420 | 37.067 | 375 | 219 | 10 | 126 | 489 | 224 | 592 | 4.76e-64 | 218 |
MS.gene038895.t1 | MTR_7g074650 | 37.366 | 372 | 199 | 11 | 131 | 489 | 442 | 792 | 1.36e-62 | 218 |
MS.gene038895.t1 | MTR_3g089055 | 32.489 | 474 | 275 | 16 | 38 | 489 | 120 | 570 | 1.99e-62 | 214 |
MS.gene038895.t1 | MTR_3g089055 | 32.489 | 474 | 275 | 16 | 38 | 489 | 115 | 565 | 2.51e-62 | 213 |
MS.gene038895.t1 | MTR_4g104020 | 34.568 | 405 | 216 | 14 | 117 | 490 | 135 | 521 | 1.77e-60 | 207 |
MS.gene038895.t1 | MTR_2g026250 | 30.228 | 483 | 306 | 15 | 25 | 490 | 129 | 597 | 3.97e-57 | 200 |
MS.gene038895.t1 | MTR_3g022830 | 30.952 | 420 | 223 | 9 | 128 | 489 | 26 | 436 | 5.38e-56 | 193 |
MS.gene038895.t1 | MTR_1g096030 | 31.490 | 416 | 231 | 16 | 111 | 491 | 65 | 461 | 8.07e-54 | 188 |
MS.gene038895.t1 | MTR_2g097410 | 32.199 | 382 | 239 | 8 | 121 | 488 | 365 | 740 | 4.65e-52 | 188 |
MS.gene038895.t1 | MTR_4g076020 | 34.211 | 380 | 201 | 13 | 131 | 494 | 88 | 434 | 1.35e-51 | 181 |
MS.gene038895.t1 | MTR_4g064160 | 33.245 | 379 | 235 | 8 | 122 | 488 | 311 | 683 | 1.28e-50 | 184 |
MS.gene038895.t1 | MTR_4g076140 | 29.932 | 441 | 232 | 14 | 118 | 490 | 39 | 470 | 1.62e-49 | 177 |
MS.gene038895.t1 | MTR_4g064180 | 29.504 | 383 | 252 | 5 | 118 | 486 | 245 | 623 | 1.87e-49 | 179 |
MS.gene038895.t1 | MTR_1g069725 | 29.955 | 444 | 262 | 14 | 66 | 488 | 47 | 462 | 1.84e-48 | 174 |
MS.gene038895.t1 | MTR_3g072710 | 33.333 | 399 | 230 | 12 | 117 | 488 | 110 | 499 | 2.95e-48 | 174 |
MS.gene038895.t1 | MTR_4g064150 | 30.412 | 388 | 248 | 7 | 117 | 488 | 351 | 732 | 3.61e-48 | 177 |
MS.gene038895.t1 | MTR_4g064120 | 28.941 | 425 | 279 | 7 | 76 | 486 | 208 | 623 | 4.46e-48 | 176 |
MS.gene038895.t1 | MTR_2g097310 | 32.199 | 382 | 239 | 8 | 119 | 488 | 264 | 637 | 6.25e-48 | 176 |
MS.gene038895.t1 | MTR_5g009080 | 29.372 | 446 | 229 | 12 | 118 | 490 | 47 | 479 | 2.04e-47 | 171 |
MS.gene038895.t1 | MTR_4g077760 | 31.965 | 463 | 271 | 18 | 58 | 489 | 106 | 555 | 3.57e-46 | 169 |
MS.gene038895.t1 | MTR_7g062120 | 30.628 | 382 | 243 | 8 | 122 | 489 | 367 | 740 | 2.21e-45 | 169 |
MS.gene038895.t1 | MTR_2g097467 | 30.617 | 405 | 260 | 12 | 94 | 488 | 260 | 653 | 2.30e-45 | 169 |
MS.gene038895.t1 | MTR_2g034250 | 29.545 | 396 | 250 | 8 | 117 | 491 | 200 | 587 | 4.10e-45 | 167 |
MS.gene038895.t1 | MTR_2g097390 | 29.574 | 470 | 297 | 13 | 33 | 488 | 191 | 640 | 5.27e-45 | 167 |
MS.gene038895.t1 | MTR_5g058860 | 31.951 | 410 | 245 | 13 | 107 | 491 | 99 | 499 | 5.65e-45 | 165 |
MS.gene038895.t1 | MTR_2g097350 | 31.070 | 383 | 242 | 10 | 119 | 488 | 266 | 639 | 1.62e-44 | 166 |
MS.gene038895.t1 | MTR_4g064200 | 31.854 | 383 | 237 | 12 | 120 | 488 | 277 | 649 | 2.79e-44 | 166 |
MS.gene038895.t1 | MTR_2g097380 | 33.433 | 335 | 190 | 9 | 159 | 488 | 254 | 560 | 9.26e-44 | 163 |
MS.gene038895.t1 | MTR_2g034260 | 28.101 | 395 | 256 | 8 | 117 | 491 | 200 | 586 | 9.75e-44 | 163 |
MS.gene038895.t1 | MTR_2g097473 | 29.484 | 407 | 262 | 11 | 94 | 488 | 260 | 653 | 7.01e-43 | 162 |
MS.gene038895.t1 | MTR_2g097463 | 30.179 | 391 | 252 | 11 | 110 | 488 | 273 | 654 | 2.03e-42 | 160 |
MS.gene038895.t1 | MTR_8g093070 | 31.088 | 386 | 219 | 15 | 124 | 488 | 136 | 495 | 2.83e-40 | 152 |
MS.gene038895.t1 | MTR_2g034280 | 27.157 | 394 | 259 | 9 | 117 | 491 | 193 | 577 | 3.02e-40 | 153 |
MS.gene038895.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 124 | 489 | 372 | 731 | 4.39e-40 | 154 |
MS.gene038895.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 124 | 489 | 369 | 728 | 4.41e-40 | 154 |
MS.gene038895.t1 | MTR_5g015490 | 29.086 | 361 | 235 | 6 | 150 | 489 | 130 | 490 | 6.49e-38 | 145 |
MS.gene038895.t1 | MTR_4g097080 | 27.671 | 365 | 232 | 11 | 147 | 489 | 149 | 503 | 1.52e-37 | 144 |
MS.gene038895.t1 | MTR_7g109580 | 27.877 | 391 | 249 | 11 | 117 | 489 | 179 | 554 | 1.42e-34 | 137 |
MS.gene038895.t1 | MTR_6g047750 | 27.720 | 386 | 240 | 9 | 126 | 489 | 294 | 662 | 1.60e-34 | 137 |
MS.gene038895.t1 | MTR_1g086970 | 27.136 | 398 | 250 | 11 | 117 | 489 | 96 | 478 | 2.90e-33 | 132 |
MS.gene038895.t1 | MTR_4g026485 | 27.068 | 399 | 256 | 13 | 108 | 490 | 246 | 625 | 1.48e-32 | 131 |
MS.gene038895.t1 | MTR_7g057230 | 32.646 | 291 | 179 | 9 | 207 | 488 | 374 | 656 | 2.94e-32 | 131 |
MS.gene038895.t1 | MTR_5g015950 | 26.253 | 419 | 246 | 13 | 126 | 488 | 34 | 445 | 3.84e-31 | 125 |
MS.gene038895.t1 | MTR_3g053270 | 26.253 | 419 | 246 | 13 | 126 | 488 | 34 | 445 | 3.84e-31 | 125 |
MS.gene038895.t1 | MTR_4g095500 | 24.691 | 486 | 274 | 17 | 76 | 488 | 1 | 467 | 3.03e-29 | 120 |
MS.gene038895.t1 | MTR_2g099110 | 25.852 | 352 | 224 | 8 | 165 | 489 | 110 | 451 | 9.82e-28 | 115 |
MS.gene038895.t1 | MTR_8g077940 | 26.842 | 380 | 247 | 9 | 124 | 489 | 179 | 541 | 1.79e-26 | 113 |
MS.gene038895.t1 | MTR_2g089100 | 23.367 | 398 | 262 | 11 | 127 | 488 | 52 | 442 | 3.24e-25 | 108 |
MS.gene038895.t1 | MTR_8g020840 | 27.157 | 313 | 192 | 9 | 200 | 489 | 249 | 548 | 4.60e-22 | 99.8 |
MS.gene038895.t1 | MTR_3g022005 | 34.211 | 114 | 63 | 2 | 387 | 489 | 13 | 125 | 2.12e-12 | 64.7 |
MS.gene038895.t1 | MTR_3g022580 | 35.714 | 112 | 66 | 3 | 382 | 489 | 74 | 183 | 1.28e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038895.t1 | AT1G14920 | 48.544 | 515 | 212 | 11 | 16 | 489 | 27 | 529 | 1.08e-161 | 469 |
MS.gene038895.t1 | AT3G03450 | 47.358 | 511 | 218 | 12 | 19 | 489 | 46 | 545 | 6.60e-151 | 442 |
MS.gene038895.t1 | AT1G66350 | 48.381 | 494 | 217 | 14 | 16 | 489 | 31 | 506 | 3.10e-148 | 434 |
MS.gene038895.t1 | AT5G17490 | 46.061 | 495 | 237 | 10 | 15 | 489 | 32 | 516 | 7.25e-144 | 423 |
MS.gene038895.t1 | AT2G01570 | 54.922 | 386 | 162 | 6 | 108 | 489 | 204 | 581 | 1.09e-142 | 422 |
MS.gene038895.t1 | AT2G01570 | 53.846 | 65 | 29 | 1 | 17 | 80 | 44 | 108 | 4.11e-13 | 72.0 |
MS.gene038895.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.55e-66 | 222 |
MS.gene038895.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.55e-66 | 222 |
MS.gene038895.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.55e-66 | 222 |
MS.gene038895.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.55e-66 | 222 |
MS.gene038895.t1 | AT2G04890 | 36.364 | 385 | 221 | 8 | 116 | 489 | 42 | 413 | 4.20e-66 | 219 |
MS.gene038895.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 135 | 526 | 5.59e-66 | 222 |
MS.gene038895.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 206 | 597 | 1.53e-65 | 223 |
MS.gene038895.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 210 | 601 | 1.66e-65 | 223 |
MS.gene038895.t1 | AT5G41920 | 35.696 | 395 | 219 | 13 | 115 | 493 | 29 | 404 | 1.23e-62 | 210 |
MS.gene038895.t1 | AT1G21450 | 33.661 | 407 | 248 | 9 | 100 | 489 | 192 | 593 | 2.58e-60 | 209 |
MS.gene038895.t1 | AT3G54220 | 35.310 | 371 | 209 | 9 | 131 | 488 | 297 | 649 | 2.33e-59 | 207 |
MS.gene038895.t1 | AT1G50420 | 31.614 | 446 | 217 | 11 | 118 | 489 | 48 | 479 | 3.07e-58 | 200 |
MS.gene038895.t1 | AT1G63100 | 34.606 | 393 | 220 | 10 | 122 | 488 | 247 | 628 | 4.13e-58 | 203 |
MS.gene038895.t1 | AT1G63100 | 34.606 | 393 | 220 | 10 | 122 | 488 | 272 | 653 | 6.86e-58 | 203 |
MS.gene038895.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 122 | 492 | 153 | 528 | 3.75e-55 | 193 |
MS.gene038895.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 122 | 492 | 153 | 528 | 3.75e-55 | 193 |
MS.gene038895.t1 | AT1G55580 | 34.359 | 390 | 217 | 13 | 119 | 489 | 76 | 445 | 2.54e-49 | 176 |
MS.gene038895.t1 | AT1G07530 | 32.061 | 393 | 248 | 8 | 109 | 488 | 378 | 764 | 6.76e-49 | 180 |
MS.gene038895.t1 | AT5G66770 | 33.148 | 359 | 215 | 10 | 148 | 489 | 234 | 584 | 9.86e-48 | 174 |
MS.gene038895.t1 | AT5G59450 | 29.323 | 399 | 257 | 9 | 108 | 489 | 208 | 598 | 1.10e-46 | 172 |
MS.gene038895.t1 | AT3G46600 | 29.676 | 401 | 263 | 9 | 101 | 489 | 154 | 547 | 1.85e-46 | 170 |
MS.gene038895.t1 | AT3G46600 | 29.412 | 408 | 269 | 9 | 94 | 489 | 179 | 579 | 2.71e-46 | 170 |
MS.gene038895.t1 | AT3G46600 | 30.423 | 378 | 244 | 9 | 124 | 489 | 1 | 371 | 1.16e-45 | 164 |
MS.gene038895.t1 | AT2G29060 | 29.481 | 424 | 272 | 11 | 84 | 493 | 247 | 657 | 7.89e-44 | 164 |
MS.gene038895.t1 | AT3G50650 | 33.721 | 344 | 201 | 8 | 163 | 489 | 209 | 542 | 1.41e-43 | 162 |
MS.gene038895.t1 | AT2G29060 | 29.481 | 424 | 272 | 11 | 84 | 493 | 284 | 694 | 1.54e-43 | 164 |
MS.gene038895.t1 | AT2G29065 | 27.296 | 392 | 239 | 9 | 127 | 488 | 252 | 627 | 1.48e-38 | 149 |
MS.gene038895.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 144 | 528 | 1.80e-38 | 147 |
MS.gene038895.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 144 | 528 | 1.80e-38 | 147 |
MS.gene038895.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 309 | 693 | 2.68e-38 | 149 |
MS.gene038895.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 308 | 692 | 2.90e-38 | 149 |
MS.gene038895.t1 | AT4G08250 | 29.668 | 391 | 247 | 17 | 116 | 488 | 96 | 476 | 5.88e-38 | 145 |
MS.gene038895.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 122 | 489 | 330 | 701 | 4.30e-36 | 142 |
MS.gene038895.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 122 | 489 | 342 | 713 | 5.62e-36 | 142 |
MS.gene038895.t1 | AT5G52510 | 29.565 | 345 | 215 | 9 | 165 | 489 | 304 | 640 | 1.37e-35 | 140 |
MS.gene038895.t1 | AT4G00150 | 27.960 | 397 | 248 | 12 | 102 | 489 | 187 | 554 | 2.02e-34 | 136 |
MS.gene038895.t1 | AT4G37650 | 27.882 | 373 | 229 | 11 | 151 | 489 | 163 | 529 | 9.12e-33 | 131 |
MS.gene038895.t1 | AT2G45160 | 29.558 | 362 | 216 | 11 | 151 | 489 | 294 | 639 | 1.09e-31 | 129 |
MS.gene038895.t1 | AT3G60630 | 28.758 | 306 | 192 | 9 | 197 | 489 | 330 | 622 | 6.73e-29 | 120 |
MS.gene038895.t1 | AT3G49950 | 27.551 | 392 | 250 | 14 | 126 | 493 | 29 | 410 | 6.91e-29 | 118 |
MS.gene038895.t1 | AT4G36710 | 26.492 | 419 | 272 | 11 | 86 | 489 | 88 | 485 | 3.29e-28 | 117 |
MS.gene038895.t1 | AT3G13840 | 25.309 | 324 | 198 | 11 | 184 | 489 | 213 | 510 | 9.70e-17 | 83.2 |
Find 140 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATAACGAGAACGGGTTTA+TGG | 0.172499 | 2.1:+37336449 | MS.gene038895:CDS |
TTCGGGTATTGAAATGGTTT+TGG | 0.204240 | 2.1:+37336371 | MS.gene038895:CDS |
CGGGTTCAGACCGTTGCATT+TGG | 0.261310 | 2.1:+37336665 | MS.gene038895:CDS |
CCATAAACCCGTTCTCGTTA+TGG | 0.276597 | 2.1:-37336449 | None:intergenic |
CCGGCCTTTGATTGCGGCTT+CGG | 0.318572 | 2.1:+37336791 | MS.gene038895:CDS |
TCAATACCCGAATGAGAATT+CGG | 0.329389 | 2.1:-37336360 | None:intergenic |
TTTCAGCTTCATCGTCTTCT+CGG | 0.339157 | 2.1:+37336324 | MS.gene038895:CDS |
CGGCATTGGTCCGCCGTCGC+TGG | 0.354188 | 2.1:+37336137 | MS.gene038895:CDS |
CCTCCGTTTCTCCGGCTTAC+CGG | 0.355777 | 2.1:+37336117 | MS.gene038895:CDS |
CTTTGATTGCGGCTTCGGCT+TGG | 0.374762 | 2.1:+37336796 | MS.gene038895:CDS |
CACTATGATCCCTCCGACAT+TGG | 0.380904 | 2.1:+37335538 | MS.gene038895:CDS |
CGTGACAACCTCCGTGAAAT+CGG | 0.385600 | 2.1:+37336165 | MS.gene038895:CDS |
ATCCCTCCGACATTGGCAAT+TGG | 0.385878 | 2.1:+37335545 | MS.gene038895:CDS |
GAATCAAGGGAGCTTGACTT+TGG | 0.395394 | 2.1:+37336758 | MS.gene038895:CDS |
TTCTCATTCGGGTATTGAAA+TGG | 0.397931 | 2.1:+37336365 | MS.gene038895:CDS |
GGGTTCAGACCGTTGCATTT+GGG | 0.405803 | 2.1:+37336666 | MS.gene038895:CDS |
TTTCTCCGGCTTACCGGCAT+TGG | 0.406008 | 2.1:+37336123 | MS.gene038895:CDS |
TGACTCGCTTGAAGCGTGTC+CGG | 0.418691 | 2.1:+37336512 | MS.gene038895:CDS |
GCTTTGAACCGTCGCATCTT+CGG | 0.420783 | 2.1:+37335871 | MS.gene038895:CDS |
TAGAGGATTGGTGGTGGTGG+TGG | 0.423765 | 2.1:-37335663 | None:intergenic |
TTCGAGTATAGCTTGATTTG+CGG | 0.426009 | 2.1:-37335992 | None:intergenic |
CGTGGTGTGCTGCGAGGGAC+CGG | 0.428279 | 2.1:+37336587 | MS.gene038895:CDS |
AACGTTAGATTCGCCTTTCG+CGG | 0.429000 | 2.1:+37336219 | MS.gene038895:CDS |
CCACGCCGCAACGCCGCGAA+AGG | 0.429090 | 2.1:-37336232 | None:intergenic |
TGTAAAGCCATGGATGCTTC+AGG | 0.430657 | 2.1:+37336266 | MS.gene038895:CDS |
AATCAAGGGAGCTTGACTTT+GGG | 0.434762 | 2.1:+37336759 | MS.gene038895:CDS |
AGAGGCCGTGTGGTCAAATT+CGG | 0.437374 | 2.1:-37335584 | None:intergenic |
TGACTTTGGGTTGGCATAGC+CGG | 0.439605 | 2.1:+37336772 | MS.gene038895:CDS |
CGGGTTTATGGAACGGTTCA+CGG | 0.439903 | 2.1:+37336461 | MS.gene038895:CDS |
CAAGCTCTTGCTCTTCGTCC+TGG | 0.444577 | 2.1:+37336090 | MS.gene038895:CDS |
TCCCTCCGACATTGGCAATT+GGG | 0.446214 | 2.1:+37335546 | MS.gene038895:CDS |
CGGTGAAGTGTGCGAATTTG+AGG | 0.451224 | 2.1:-37335972 | None:intergenic |
CGAGACGGAGGCCGATTTCA+CGG | 0.453634 | 2.1:-37336176 | None:intergenic |
ATCCGACCCGAATTCTCATT+CGG | 0.456753 | 2.1:+37336353 | MS.gene038895:CDS |
CAATACCCGAATGAGAATTC+GGG | 0.457985 | 2.1:-37336359 | None:intergenic |
CGACATTTCACAATTTGCTT+CGG | 0.462065 | 2.1:+37335507 | MS.gene038895:CDS |
ATCTCGGCCATAGCTTTATC+CGG | 0.466984 | 2.1:-37336540 | None:intergenic |
TCCGACCCGAATTCTCATTC+GGG | 0.467756 | 2.1:+37336354 | MS.gene038895:CDS |
ATAGCTTTATCCGGTTCAAC+CGG | 0.472673 | 2.1:-37336531 | None:intergenic |
AAGCGAACCATAACGAGAAC+GGG | 0.473338 | 2.1:+37336442 | MS.gene038895:CDS |
TGAAGCGTGTCCGGTTGAAC+CGG | 0.475946 | 2.1:+37336521 | MS.gene038895:CDS |
CAGCGACGGCGGACCAATGC+CGG | 0.478193 | 2.1:-37336136 | None:intergenic |
GACATGAACCGTTGGTTAAG+TGG | 0.479723 | 2.1:+37336622 | MS.gene038895:CDS |
TGGTGGTGGTGGTGTTGTGA+CGG | 0.481160 | 2.1:-37335649 | None:intergenic |
AAGGAGCGGCTCGGTAAAGC+CGG | 0.483410 | 2.1:+37336645 | MS.gene038895:CDS |
CCTTTCGCGGCGTTGCGGCG+TGG | 0.496391 | 2.1:+37336232 | MS.gene038895:CDS |
CGGAGAAACGGAGGTCCGCC+AGG | 0.496483 | 2.1:-37336108 | None:intergenic |
CGTGGTAATCTTCCATTGGC+TGG | 0.502641 | 2.1:+37335763 | MS.gene038895:CDS |
TTCGCGGCGTTGCGGCGTGG+CGG | 0.506872 | 2.1:+37336235 | MS.gene038895:CDS |
CTCTCTTTGTAAATACATCT+CGG | 0.511803 | 2.1:-37336556 | None:intergenic |
CAAAGCGTCGATGAAGTATC+CGG | 0.512312 | 2.1:-37335854 | None:intergenic |
GACGGCGGTGCTGAGAGATC+TGG | 0.512412 | 2.1:-37335631 | None:intergenic |
CTGGCGGACCTCCGTTTCTC+CGG | 0.512726 | 2.1:+37336109 | MS.gene038895:CDS |
GCGGACCAATGCCGGTAAGC+CGG | 0.513787 | 2.1:-37336128 | None:intergenic |
ACCTCATGCATGGTCTTCAA+TGG | 0.514040 | 2.1:+37336055 | MS.gene038895:CDS |
GAACTCACCTGAAGCATCCA+TGG | 0.518449 | 2.1:-37336273 | None:intergenic |
GCATAGCCGGCCTTTGATTG+CGG | 0.520541 | 2.1:+37336785 | MS.gene038895:CDS |
ATTCGCCTTTCGCGGCGTTG+CGG | 0.526404 | 2.1:+37336227 | MS.gene038895:CDS |
CAAGCCGAAGCCGCAATCAA+AGG | 0.528493 | 2.1:-37336795 | None:intergenic |
AAGGGAGCTTGACTTTGGGT+TGG | 0.530891 | 2.1:+37336763 | MS.gene038895:CDS |
TCGTTAATCGAAGGCATGCA+AGG | 0.531649 | 2.1:+37335787 | MS.gene038895:CDS |
CCGAAGCCGCAATCAAAGGC+CGG | 0.539000 | 2.1:-37336791 | None:intergenic |
CGCTCCTTCCACTTAACCAA+CGG | 0.539436 | 2.1:-37336630 | None:intergenic |
ATGCCGGTAAGCCGGAGAAA+CGG | 0.543739 | 2.1:-37336120 | None:intergenic |
CGTTCTCGTAAAGAGAAACT+TGG | 0.543788 | 2.1:-37335912 | None:intergenic |
TCGATTAACGAGCCAGCCAA+TGG | 0.545335 | 2.1:-37335775 | None:intergenic |
TATTAACTGTCGTAGAGGAT+TGG | 0.548033 | 2.1:-37335675 | None:intergenic |
CAAATGCAACGGTCTGAACC+CGG | 0.552323 | 2.1:-37336664 | None:intergenic |
GCAACGTGGTAATCTTCCAT+TGG | 0.552649 | 2.1:+37335759 | MS.gene038895:CDS |
AGAGAAATCGTAGGGTAAAG+AGG | 0.554274 | 2.1:-37335602 | None:intergenic |
ATGAACACAATCTCCGGCAT+CGG | 0.555034 | 2.1:+37335823 | MS.gene038895:CDS |
TCTGACTTTGTAGCCGACAT+TGG | 0.557024 | 2.1:-37335416 | None:intergenic |
GCAAACATGAACACAATCTC+CGG | 0.557304 | 2.1:+37335817 | MS.gene038895:CDS |
TGGAAGATTACCACGTTGCA+CGG | 0.558728 | 2.1:-37335755 | None:intergenic |
CACCCAATTGCCAATGTCGG+AGG | 0.559532 | 2.1:-37335548 | None:intergenic |
TAACTGTCGTAGAGGATTGG+TGG | 0.563126 | 2.1:-37335672 | None:intergenic |
ATTGATTTCAACCTCATGCA+TGG | 0.563574 | 2.1:+37336045 | MS.gene038895:CDS |
AAAGGCGAATCTAACGTTAA+CGG | 0.563777 | 2.1:-37336214 | None:intergenic |
AGGAGCGGCTCGGTAAAGCC+GGG | 0.565092 | 2.1:+37336646 | MS.gene038895:CDS |
TCATGTCTCTCAACTCGAGC+CGG | 0.568274 | 2.1:-37336606 | None:intergenic |
ATCATCTGAGCTACATCAAG+TGG | 0.570501 | 2.1:+37335438 | MS.gene038895:CDS |
TATTGCGTGGAAGAGAATCA+AGG | 0.570726 | 2.1:+37336744 | MS.gene038895:CDS |
GACAAGCTTCGTAGTAGTGA+TGG | 0.571422 | 2.1:-37335945 | None:intergenic |
TCGTAGAGGATTGGTGGTGG+TGG | 0.573506 | 2.1:-37335666 | None:intergenic |
TCCGGCATCGGAAAAGTCGC+CGG | 0.573578 | 2.1:+37335835 | MS.gene038895:CDS |
GAAGCGAACCATAACGAGAA+CGG | 0.581490 | 2.1:+37336441 | MS.gene038895:CDS |
GTCCACCCAATTGCCAATGT+CGG | 0.582283 | 2.1:-37335551 | None:intergenic |
ACGTTGCACGGAATCTGCAC+AGG | 0.591505 | 2.1:-37335743 | None:intergenic |
TGCAACGTGGTGTGCTGCGA+GGG | 0.592419 | 2.1:+37336582 | MS.gene038895:CDS |
CTTTGTAGCCGACATTGGCA+AGG | 0.593493 | 2.1:-37335411 | None:intergenic |
AAGTGTGCGAATTTGAGGTA+TGG | 0.594726 | 2.1:-37335967 | None:intergenic |
GGTTGAACCGGATAAAGCTA+TGG | 0.595176 | 2.1:+37336533 | MS.gene038895:CDS |
TCTCGTAAAGAGAAACTTGG+TGG | 0.598426 | 2.1:-37335909 | None:intergenic |
CGATTTCACGGAGGTTGTCA+CGG | 0.600453 | 2.1:-37336164 | None:intergenic |
TGGTGGTGGTGTTGTGACGG+CGG | 0.602575 | 2.1:-37335646 | None:intergenic |
GGAAGTTCAGAGAAATCGTA+GGG | 0.603775 | 2.1:-37335610 | None:intergenic |
GCTCTTGCTCTTCGTCCTGG+CGG | 0.606990 | 2.1:+37336093 | MS.gene038895:CDS |
CTCCGACATTGGCAATTGGG+TGG | 0.609033 | 2.1:+37335549 | MS.gene038895:CDS |
ACCCAATTGCCAATGTCGGA+GGG | 0.609324 | 2.1:-37335547 | None:intergenic |
GACAGTATTAACTGTCGTAG+AGG | 0.614871 | 2.1:-37335680 | None:intergenic |
TGGAAGTTCAGAGAAATCGT+AGG | 0.615760 | 2.1:-37335611 | None:intergenic |
AGCGTGCAAGTTCAGCGAGA+CGG | 0.617149 | 2.1:-37336191 | None:intergenic |
GACGGCCTCCTTGCCAATGT+CGG | 0.620771 | 2.1:+37335403 | MS.gene038895:CDS |
CGTTAATCGAAGGCATGCAA+GGG | 0.622830 | 2.1:+37335788 | MS.gene038895:CDS |
TGAACCGTTGGTTAAGTGGA+AGG | 0.623165 | 2.1:+37336626 | MS.gene038895:CDS |
ACGAGAACGGGTTTATGGAA+CGG | 0.624479 | 2.1:+37336454 | MS.gene038895:CDS |
GCTATACTCGAAGCTTTCAA+CGG | 0.625134 | 2.1:+37336003 | MS.gene038895:CDS |
CAATGACGTGGACACAATCG+TGG | 0.629821 | 2.1:-37336026 | None:intergenic |
GTTAAGTGGAAGGAGCGGCT+CGG | 0.631755 | 2.1:+37336636 | MS.gene038895:CDS |
TTGGCTGGCTCGTTAATCGA+AGG | 0.631890 | 2.1:+37335778 | MS.gene038895:CDS |
TTCAGCGGAGGGTTATTGCG+TGG | 0.637968 | 2.1:+37336731 | MS.gene038895:CDS |
ATTGCGTGGAAGAGAATCAA+GGG | 0.640198 | 2.1:+37336745 | MS.gene038895:CDS |
AGTTGAGAGACATGAACCGT+TGG | 0.643232 | 2.1:+37336614 | MS.gene038895:CDS |
GCATTCGAACCCAAATGCAA+CGG | 0.649133 | 2.1:-37336675 | None:intergenic |
GCAAGAGCTTGAATTAACGC+TGG | 0.649987 | 2.1:-37336078 | None:intergenic |
TCACGGTCATCCAGCGACGG+CGG | 0.651033 | 2.1:-37336147 | None:intergenic |
CAATGTCGGAGGGATCATAG+TGG | 0.653195 | 2.1:-37335537 | None:intergenic |
GGTGAGTTCTAAAGAAGCTG+TGG | 0.654073 | 2.1:+37336287 | MS.gene038895:CDS |
GTGCAAGTTCAGCGAGACGG+AGG | 0.656208 | 2.1:-37336188 | None:intergenic |
GAGTTCTAAAGAAGCTGTGG+CGG | 0.658727 | 2.1:+37336290 | MS.gene038895:CDS |
TTGTCACGGTCATCCAGCGA+CGG | 0.659920 | 2.1:-37336150 | None:intergenic |
CGTTGGTTAAGTGGAAGGAG+CGG | 0.660011 | 2.1:+37336631 | MS.gene038895:CDS |
TGTAGCCGACATTGGCAAGG+AGG | 0.660431 | 2.1:-37335408 | None:intergenic |
CTGTCGTAGAGGATTGGTGG+TGG | 0.661441 | 2.1:-37335669 | None:intergenic |
TCAAAGACAAAAGACATCGA+CGG | 0.665997 | 2.1:+37335385 | MS.gene038895:CDS |
CTGCACAGGTCATCAGCATG+TGG | 0.667697 | 2.1:-37335729 | None:intergenic |
CCGGTAAGCCGGAGAAACGG+AGG | 0.669681 | 2.1:-37336117 | None:intergenic |
CCTCTCCGAATTTGACCACA+CGG | 0.676826 | 2.1:+37335579 | MS.gene038895:CDS |
GGCTTGAAGATGTAAAGCCA+TGG | 0.681200 | 2.1:+37336256 | MS.gene038895:CDS |
AGTGTTTCAGCATCTAACAA+AGG | 0.702442 | 2.1:-37336828 | None:intergenic |
CGTAGGGTAAAGAGGCCGTG+TGG | 0.707233 | 2.1:-37335594 | None:intergenic |
GCCATTGAAGACCATGCATG+AGG | 0.712810 | 2.1:-37336056 | None:intergenic |
ACCCGAATGAGAATTCGGGT+CGG | 0.713077 | 2.1:-37336355 | None:intergenic |
CCGTGTGGTCAAATTCGGAG+AGG | 0.714620 | 2.1:-37335579 | None:intergenic |
ATGCAACGTGGTGTGCTGCG+AGG | 0.715668 | 2.1:+37336581 | MS.gene038895:CDS |
TGAGGTTGAAATCAATGACG+TGG | 0.716676 | 2.1:-37336038 | None:intergenic |
GACGGAGGCCGATTTCACGG+AGG | 0.751201 | 2.1:-37336173 | None:intergenic |
TGTGCAGATTCCGTGCAACG+TGG | 0.753527 | 2.1:+37335745 | MS.gene038895:CDS |
GTTTATGGAACGGTTCACGG+AGG | 0.758651 | 2.1:+37336464 | MS.gene038895:CDS |
ACAAAGAGAGATATGCAACG+TGG | 0.806079 | 2.1:+37336569 | MS.gene038895:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CTCTCTTTGTAAATACATCT+CGG | - | chr2.1:37336559-37336578 | None:intergenic | 30.0% | |
! | TCAACAACTGTAACGATTTT+CGG | - | chr2.1:37336417-37336436 | None:intergenic | 30.0% |
AAAGGCGAATCTAACGTTAA+CGG | - | chr2.1:37336217-37336236 | None:intergenic | 35.0% | |
AGTGTTTCAGCATCTAACAA+AGG | - | chr2.1:37336831-37336850 | None:intergenic | 35.0% | |
TATTAACTGTCGTAGAGGAT+TGG | - | chr2.1:37335678-37335697 | None:intergenic | 35.0% | |
TCAAAGACAAAAGACATCGA+CGG | + | chr2.1:37335385-37335404 | MS.gene038895:CDS | 35.0% | |
TCAATACCCGAATGAGAATT+CGG | - | chr2.1:37336363-37336382 | None:intergenic | 35.0% | |
! | ATTGATTTCAACCTCATGCA+TGG | + | chr2.1:37336045-37336064 | MS.gene038895:CDS | 35.0% |
! | CGACATTTCACAATTTGCTT+CGG | + | chr2.1:37335507-37335526 | MS.gene038895:CDS | 35.0% |
! | CGATGTCTTTTGTCTTTGAT+GGG | - | chr2.1:37335384-37335403 | None:intergenic | 35.0% |
! | GATGTCTTTTGTCTTTGATG+GGG | - | chr2.1:37335383-37335402 | None:intergenic | 35.0% |
! | TCGATGTCTTTTGTCTTTGA+TGG | - | chr2.1:37335385-37335404 | None:intergenic | 35.0% |
! | TTCGAGTATAGCTTGATTTG+CGG | - | chr2.1:37335995-37336014 | None:intergenic | 35.0% |
!! | TTCTCATTCGGGTATTGAAA+TGG | + | chr2.1:37336365-37336384 | MS.gene038895:CDS | 35.0% |
!!! | GTATTGAAATGGTTTTGGGT+TGG | + | chr2.1:37336376-37336395 | MS.gene038895:CDS | 35.0% |
!!! | TCGGGTATTGAAATGGTTTT+GGG | + | chr2.1:37336372-37336391 | MS.gene038895:CDS | 35.0% |
!!! | TTCGGGTATTGAAATGGTTT+TGG | + | chr2.1:37336371-37336390 | MS.gene038895:CDS | 35.0% |
AATCAAGGGAGCTTGACTTT+GGG | + | chr2.1:37336759-37336778 | MS.gene038895:CDS | 40.0% | |
ACAAAGAGAGATATGCAACG+TGG | + | chr2.1:37336569-37336588 | MS.gene038895:CDS | 40.0% | |
AGAGAAATCGTAGGGTAAAG+AGG | - | chr2.1:37335605-37335624 | None:intergenic | 40.0% | |
ATCATCTGAGCTACATCAAG+TGG | + | chr2.1:37335438-37335457 | MS.gene038895:CDS | 40.0% | |
ATTGCGTGGAAGAGAATCAA+GGG | + | chr2.1:37336745-37336764 | MS.gene038895:CDS | 40.0% | |
CAATACCCGAATGAGAATTC+GGG | - | chr2.1:37336362-37336381 | None:intergenic | 40.0% | |
CGTTCTCGTAAAGAGAAACT+TGG | - | chr2.1:37335915-37335934 | None:intergenic | 40.0% | |
GACAGTATTAACTGTCGTAG+AGG | - | chr2.1:37335683-37335702 | None:intergenic | 40.0% | |
GCAAACATGAACACAATCTC+CGG | + | chr2.1:37335817-37335836 | MS.gene038895:CDS | 40.0% | |
GCTATACTCGAAGCTTTCAA+CGG | + | chr2.1:37336003-37336022 | MS.gene038895:CDS | 40.0% | |
GGAAGTTCAGAGAAATCGTA+GGG | - | chr2.1:37335613-37335632 | None:intergenic | 40.0% | |
TATTGCGTGGAAGAGAATCA+AGG | + | chr2.1:37336744-37336763 | MS.gene038895:CDS | 40.0% | |
TCTCGTAAAGAGAAACTTGG+TGG | - | chr2.1:37335912-37335931 | None:intergenic | 40.0% | |
TGAGGTTGAAATCAATGACG+TGG | - | chr2.1:37336041-37336060 | None:intergenic | 40.0% | |
TGGAAGTTCAGAGAAATCGT+AGG | - | chr2.1:37335614-37335633 | None:intergenic | 40.0% | |
TTTCAGCTTCATCGTCTTCT+CGG | + | chr2.1:37336324-37336343 | MS.gene038895:CDS | 40.0% | |
! | AAGTGTGCGAATTTGAGGTA+TGG | - | chr2.1:37335970-37335989 | None:intergenic | 40.0% |
! | CGATTTTCGGATTCAAACTC+CGG | - | chr2.1:37336404-37336423 | None:intergenic | 40.0% |
!! | ATAGCTTTATCCGGTTCAAC+CGG | - | chr2.1:37336534-37336553 | None:intergenic | 40.0% |
!!! | AAATGGTTTTGGGTTGGATC+CGG | + | chr2.1:37336382-37336401 | MS.gene038895:CDS | 40.0% |
!!! | GTTGTTGACTCTGTTTTCAG+CGG | + | chr2.1:37336716-37336735 | MS.gene038895:CDS | 40.0% |
AACGTTAGATTCGCCTTTCG+CGG | + | chr2.1:37336219-37336238 | MS.gene038895:CDS | 45.0% | |
AAGCGAACCATAACGAGAAC+GGG | + | chr2.1:37336442-37336461 | MS.gene038895:CDS | 45.0% | |
ACCTCATGCATGGTCTTCAA+TGG | + | chr2.1:37336055-37336074 | MS.gene038895:CDS | 45.0% | |
AGTTGAGAGACATGAACCGT+TGG | + | chr2.1:37336614-37336633 | MS.gene038895:CDS | 45.0% | |
ATCCGACCCGAATTCTCATT+CGG | + | chr2.1:37336353-37336372 | MS.gene038895:CDS | 45.0% | |
ATGAACACAATCTCCGGCAT+CGG | + | chr2.1:37335823-37335842 | MS.gene038895:CDS | 45.0% | |
CCATAAACCCGTTCTCGTTA+TGG | - | chr2.1:37336452-37336471 | None:intergenic | 45.0% | |
CGCTTCAAGCGAGTCAAAAA+CGG | - | chr2.1:37336508-37336527 | None:intergenic | 45.0% | |
GAAGCGAACCATAACGAGAA+CGG | + | chr2.1:37336441-37336460 | MS.gene038895:CDS | 45.0% | |
GAATCAAGGGAGCTTGACTT+TGG | + | chr2.1:37336758-37336777 | MS.gene038895:CDS | 45.0% | |
GACAAGCTTCGTAGTAGTGA+TGG | - | chr2.1:37335948-37335967 | None:intergenic | 45.0% | |
GCAACGTGGTAATCTTCCAT+TGG | + | chr2.1:37335759-37335778 | MS.gene038895:CDS | 45.0% | |
GCAAGAGCTTGAATTAACGC+TGG | - | chr2.1:37336081-37336100 | None:intergenic | 45.0% | |
GCATTCGAACCCAAATGCAA+CGG | - | chr2.1:37336678-37336697 | None:intergenic | 45.0% | |
GGCTTGAAGATGTAAAGCCA+TGG | + | chr2.1:37336256-37336275 | MS.gene038895:CDS | 45.0% | |
GGTTGAACCGGATAAAGCTA+TGG | + | chr2.1:37336533-37336552 | MS.gene038895:CDS | 45.0% | |
TAACTGTCGTAGAGGATTGG+TGG | - | chr2.1:37335675-37335694 | None:intergenic | 45.0% | |
TCTGACTTTGTAGCCGACAT+TGG | - | chr2.1:37335419-37335438 | None:intergenic | 45.0% | |
TGGAAGATTACCACGTTGCA+CGG | - | chr2.1:37335758-37335777 | None:intergenic | 45.0% | |
TGTAAAGCCATGGATGCTTC+AGG | + | chr2.1:37336266-37336285 | MS.gene038895:CDS | 45.0% | |
! | ACGAGAACGGGTTTATGGAA+CGG | + | chr2.1:37336454-37336473 | MS.gene038895:CDS | 45.0% |
! | CCATAACGAGAACGGGTTTA+TGG | + | chr2.1:37336449-37336468 | MS.gene038895:CDS | 45.0% |
! | CGTTAATCGAAGGCATGCAA+GGG | + | chr2.1:37335788-37335807 | MS.gene038895:CDS | 45.0% |
! | GACATGAACCGTTGGTTAAG+TGG | + | chr2.1:37336622-37336641 | MS.gene038895:CDS | 45.0% |
! | TCGTTAATCGAAGGCATGCA+AGG | + | chr2.1:37335787-37335806 | MS.gene038895:CDS | 45.0% |
! | TGAACCGTTGGTTAAGTGGA+AGG | + | chr2.1:37336626-37336645 | MS.gene038895:CDS | 45.0% |
! | TTGACTCTGTTTTCAGCGGA+GGG | + | chr2.1:37336720-37336739 | MS.gene038895:CDS | 45.0% |
!! | ATCTCGGCCATAGCTTTATC+CGG | - | chr2.1:37336543-37336562 | None:intergenic | 45.0% |
!! | CAAAGCGTCGATGAAGTATC+CGG | - | chr2.1:37335857-37335876 | None:intergenic | 45.0% |
!! | GAGTTCTAAAGAAGCTGTGG+CGG | + | chr2.1:37336290-37336309 | MS.gene038895:CDS | 45.0% |
!! | GGTGAGTTCTAAAGAAGCTG+TGG | + | chr2.1:37336287-37336306 | MS.gene038895:CDS | 45.0% |
!!! | TGTTTTGACCGAAGATGCGA+CGG | - | chr2.1:37335882-37335901 | None:intergenic | 45.0% |
AAGGGAGCTTGACTTTGGGT+TGG | + | chr2.1:37336763-37336782 | MS.gene038895:CDS | 50.0% | |
ACCCAATTGCCAATGTCGGA+GGG | - | chr2.1:37335550-37335569 | None:intergenic | 50.0% | |
ACCCGAATGAGAATTCGGGT+CGG | - | chr2.1:37336358-37336377 | None:intergenic | 50.0% | |
AGAGGCCGTGTGGTCAAATT+CGG | - | chr2.1:37335587-37335606 | None:intergenic | 50.0% | |
ATCCCTCCGACATTGGCAAT+TGG | + | chr2.1:37335545-37335564 | MS.gene038895:CDS | 50.0% | |
CAAATGCAACGGTCTGAACC+CGG | - | chr2.1:37336667-37336686 | None:intergenic | 50.0% | |
CAATGACGTGGACACAATCG+TGG | - | chr2.1:37336029-37336048 | None:intergenic | 50.0% | |
CAATGTCGGAGGGATCATAG+TGG | - | chr2.1:37335540-37335559 | None:intergenic | 50.0% | |
CACTATGATCCCTCCGACAT+TGG | + | chr2.1:37335538-37335557 | MS.gene038895:CDS | 50.0% | |
CCTCTCCGAATTTGACCACA+CGG | + | chr2.1:37335579-37335598 | MS.gene038895:CDS | 50.0% | |
CGATTTCACGGAGGTTGTCA+CGG | - | chr2.1:37336167-37336186 | None:intergenic | 50.0% | |
CGCTCCTTCCACTTAACCAA+CGG | - | chr2.1:37336633-37336652 | None:intergenic | 50.0% | |
CGGGTTTATGGAACGGTTCA+CGG | + | chr2.1:37336461-37336480 | MS.gene038895:CDS | 50.0% | |
CGGTGAAGTGTGCGAATTTG+AGG | - | chr2.1:37335975-37335994 | None:intergenic | 50.0% | |
CGTGACAACCTCCGTGAAAT+CGG | + | chr2.1:37336165-37336184 | MS.gene038895:CDS | 50.0% | |
CGTGGTAATCTTCCATTGGC+TGG | + | chr2.1:37335763-37335782 | MS.gene038895:CDS | 50.0% | |
CTTTGTAGCCGACATTGGCA+AGG | - | chr2.1:37335414-37335433 | None:intergenic | 50.0% | |
GCCATTGAAGACCATGCATG+AGG | - | chr2.1:37336059-37336078 | None:intergenic | 50.0% | |
GGGTTCAGACCGTTGCATTT+GGG | + | chr2.1:37336666-37336685 | MS.gene038895:CDS | 50.0% | |
GTCCACCCAATTGCCAATGT+CGG | - | chr2.1:37335554-37335573 | None:intergenic | 50.0% | |
GTTTATGGAACGGTTCACGG+AGG | + | chr2.1:37336464-37336483 | MS.gene038895:CDS | 50.0% | |
TCATGTCTCTCAACTCGAGC+CGG | - | chr2.1:37336609-37336628 | None:intergenic | 50.0% | |
TCCCTCCGACATTGGCAATT+GGG | + | chr2.1:37335546-37335565 | MS.gene038895:CDS | 50.0% | |
TCCGACCCGAATTCTCATTC+GGG | + | chr2.1:37336354-37336373 | MS.gene038895:CDS | 50.0% | |
TCGATTAACGAGCCAGCCAA+TGG | - | chr2.1:37335778-37335797 | None:intergenic | 50.0% | |
! | CGTTGGTTAAGTGGAAGGAG+CGG | + | chr2.1:37336631-37336650 | MS.gene038895:CDS | 50.0% |
! | GAACTCACCTGAAGCATCCA+TGG | - | chr2.1:37336276-37336295 | None:intergenic | 50.0% |
! | GCTTTGAACCGTCGCATCTT+CGG | + | chr2.1:37335871-37335890 | MS.gene038895:CDS | 50.0% |
!! | GTTGACTCTGTTTTCAGCGG+AGG | + | chr2.1:37336719-37336738 | MS.gene038895:CDS | 50.0% |
!! | TGACTTTGGGTTGGCATAGC+CGG | + | chr2.1:37336772-37336791 | MS.gene038895:CDS | 50.0% |
!! | TTGGCTGGCTCGTTAATCGA+AGG | + | chr2.1:37335778-37335797 | MS.gene038895:CDS | 50.0% |
ACGTTGCACGGAATCTGCAC+AGG | - | chr2.1:37335746-37335765 | None:intergenic | 55.0% | |
AGCGTGCAAGTTCAGCGAGA+CGG | - | chr2.1:37336194-37336213 | None:intergenic | 55.0% | |
ATGCCGGTAAGCCGGAGAAA+CGG | - | chr2.1:37336123-37336142 | None:intergenic | 55.0% | |
CAAGCCGAAGCCGCAATCAA+AGG | - | chr2.1:37336798-37336817 | None:intergenic | 55.0% | |
CAAGCTCTTGCTCTTCGTCC+TGG | + | chr2.1:37336090-37336109 | MS.gene038895:CDS | 55.0% | |
CACCCAATTGCCAATGTCGG+AGG | - | chr2.1:37335551-37335570 | None:intergenic | 55.0% | |
CCGTGTGGTCAAATTCGGAG+AGG | - | chr2.1:37335582-37335601 | None:intergenic | 55.0% | |
CGGGTTCAGACCGTTGCATT+TGG | + | chr2.1:37336665-37336684 | MS.gene038895:CDS | 55.0% | |
CTCCGACATTGGCAATTGGG+TGG | + | chr2.1:37335549-37335568 | MS.gene038895:CDS | 55.0% | |
CTGCACAGGTCATCAGCATG+TGG | - | chr2.1:37335732-37335751 | None:intergenic | 55.0% | |
CTTTGATTGCGGCTTCGGCT+TGG | + | chr2.1:37336796-37336815 | MS.gene038895:CDS | 55.0% | |
GCATAGCCGGCCTTTGATTG+CGG | + | chr2.1:37336785-37336804 | MS.gene038895:CDS | 55.0% | |
GTTAAGTGGAAGGAGCGGCT+CGG | + | chr2.1:37336636-37336655 | MS.gene038895:CDS | 55.0% | |
TGAAGCGTGTCCGGTTGAAC+CGG | + | chr2.1:37336521-37336540 | MS.gene038895:CDS | 55.0% | |
TGACTCGCTTGAAGCGTGTC+CGG | + | chr2.1:37336512-37336531 | MS.gene038895:CDS | 55.0% | |
TGTAGCCGACATTGGCAAGG+AGG | - | chr2.1:37335411-37335430 | None:intergenic | 55.0% | |
TGTGCAGATTCCGTGCAACG+TGG | + | chr2.1:37335745-37335764 | MS.gene038895:CDS | 55.0% | |
TTCAGCGGAGGGTTATTGCG+TGG | + | chr2.1:37336731-37336750 | MS.gene038895:CDS | 55.0% | |
TTGTCACGGTCATCCAGCGA+CGG | - | chr2.1:37336153-37336172 | None:intergenic | 55.0% | |
TTTCTCCGGCTTACCGGCAT+TGG | + | chr2.1:37336123-37336142 | MS.gene038895:CDS | 55.0% | |
! | CTGTCGTAGAGGATTGGTGG+TGG | - | chr2.1:37335672-37335691 | None:intergenic | 55.0% |
!! | TAGAGGATTGGTGGTGGTGG+TGG | - | chr2.1:37335666-37335685 | None:intergenic | 55.0% |
!! | TCGTAGAGGATTGGTGGTGG+TGG | - | chr2.1:37335669-37335688 | None:intergenic | 55.0% |
!! | TGGTGGTGGTGGTGTTGTGA+CGG | - | chr2.1:37335652-37335671 | None:intergenic | 55.0% |
ATGCAACGTGGTGTGCTGCG+AGG | + | chr2.1:37336581-37336600 | MS.gene038895:CDS | 60.0% | |
ATTCGCCTTTCGCGGCGTTG+CGG | + | chr2.1:37336227-37336246 | MS.gene038895:CDS | 60.0% | |
CCGAAGCCGCAATCAAAGGC+CGG | - | chr2.1:37336794-37336813 | None:intergenic | 60.0% | |
CCGGCCTTTGATTGCGGCTT+CGG | + | chr2.1:37336791-37336810 | MS.gene038895:CDS | 60.0% | |
CCTCCGTTTCTCCGGCTTAC+CGG | + | chr2.1:37336117-37336136 | MS.gene038895:CDS | 60.0% | |
CGTAGGGTAAAGAGGCCGTG+TGG | - | chr2.1:37335597-37335616 | None:intergenic | 60.0% | |
GACGGCCTCCTTGCCAATGT+CGG | + | chr2.1:37335403-37335422 | MS.gene038895:CDS | 60.0% | |
GCTCTTGCTCTTCGTCCTGG+CGG | + | chr2.1:37336093-37336112 | MS.gene038895:CDS | 60.0% | |
GTGCAAGTTCAGCGAGACGG+AGG | - | chr2.1:37336191-37336210 | None:intergenic | 60.0% | |
TGCAACGTGGTGTGCTGCGA+GGG | + | chr2.1:37336582-37336601 | MS.gene038895:CDS | 60.0% | |
! | CGAGACGGAGGCCGATTTCA+CGG | - | chr2.1:37336179-37336198 | None:intergenic | 60.0% |
! | TCCGGCATCGGAAAAGTCGC+CGG | + | chr2.1:37335835-37335854 | MS.gene038895:CDS | 60.0% |
! | TCCGGCGACTTTTCCGATGC+CGG | - | chr2.1:37335839-37335858 | None:intergenic | 60.0% |
!! | AAGGAGCGGCTCGGTAAAGC+CGG | + | chr2.1:37336645-37336664 | MS.gene038895:CDS | 60.0% |
!! | AGGATTGGTGGTGGTGGTGG+TGG | - | chr2.1:37335663-37335682 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGTTGTGACGG+CGG | - | chr2.1:37335649-37335668 | None:intergenic | 60.0% |
CCGGTAAGCCGGAGAAACGG+AGG | - | chr2.1:37336120-37336139 | None:intergenic | 65.0% | |
GCGGACCAATGCCGGTAAGC+CGG | - | chr2.1:37336131-37336150 | None:intergenic | 65.0% | |
TCACGGTCATCCAGCGACGG+CGG | - | chr2.1:37336150-37336169 | None:intergenic | 65.0% | |
! | CTGGCGGACCTCCGTTTCTC+CGG | + | chr2.1:37336109-37336128 | MS.gene038895:CDS | 65.0% |
! | GACGGAGGCCGATTTCACGG+AGG | - | chr2.1:37336176-37336195 | None:intergenic | 65.0% |
! | GACGGCGGTGCTGAGAGATC+TGG | - | chr2.1:37335634-37335653 | None:intergenic | 65.0% |
!! | AGGAGCGGCTCGGTAAAGCC+GGG | + | chr2.1:37336646-37336665 | MS.gene038895:CDS | 65.0% |
CAGCGACGGCGGACCAATGC+CGG | - | chr2.1:37336139-37336158 | None:intergenic | 70.0% | |
CGGAGAAACGGAGGTCCGCC+AGG | - | chr2.1:37336111-37336130 | None:intergenic | 70.0% | |
CGTGGTGTGCTGCGAGGGAC+CGG | + | chr2.1:37336587-37336606 | MS.gene038895:CDS | 70.0% | |
CCACGCCGCAACGCCGCGAA+AGG | - | chr2.1:37336235-37336254 | None:intergenic | 75.0% | |
CCTTTCGCGGCGTTGCGGCG+TGG | + | chr2.1:37336232-37336251 | MS.gene038895:CDS | 75.0% | |
TTCGCGGCGTTGCGGCGTGG+CGG | + | chr2.1:37336235-37336254 | MS.gene038895:CDS | 75.0% | |
!! | CGGCATTGGTCCGCCGTCGC+TGG | + | chr2.1:37336137-37336156 | MS.gene038895:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 37335355 | 37336866 | 37335355 | ID=MS.gene038895 |
chr2.1 | mRNA | 37335355 | 37336866 | 37335355 | ID=MS.gene038895.t1;Parent=MS.gene038895 |
chr2.1 | exon | 37335355 | 37336866 | 37335355 | ID=MS.gene038895.t1.exon1;Parent=MS.gene038895.t1 |
chr2.1 | CDS | 37335355 | 37336866 | 37335355 | ID=cds.MS.gene038895.t1;Parent=MS.gene038895.t1 |
Gene Sequence |
Protein sequence |