AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038958

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038958.t1 MTR_6g444980 97.872 376 6 2 1 375 1 375 0.0 753
MS.gene038958.t1 MTR_6g444980 90.691 376 6 2 1 375 1 348 0.0 687
MS.gene038958.t1 MTR_2g086450 56.213 169 57 3 25 176 35 203 2.02e-52 179
MS.gene038958.t1 MTR_5g027440 53.988 163 60 4 22 171 10 170 1.09e-51 174
MS.gene038958.t1 MTR_6g032990 54.878 164 61 2 28 178 35 198 6.26e-51 175
MS.gene038958.t1 MTR_4g081710 54.839 155 60 3 28 173 10 163 1.44e-49 170
MS.gene038958.t1 MTR_5g041350 55.280 161 55 3 28 175 8 164 3.64e-49 169
MS.gene038958.t1 MTR_1g090670 51.397 179 74 4 14 183 23 197 3.52e-47 162
MS.gene038958.t1 MTR_2g027800 52.632 171 69 4 23 183 27 195 4.74e-47 162
MS.gene038958.t1 MTR_7g088070 55.405 148 62 3 35 181 50 194 6.51e-45 156
MS.gene038958.t1 MTR_7g088070 55.102 147 60 3 35 181 50 190 1.44e-43 152
MS.gene038958.t1 MTR_2g027860 57.746 142 52 3 35 173 49 185 2.87e-43 153
MS.gene038958.t1 MTR_2g027800 46.927 179 53 4 23 183 27 181 7.58e-42 149
MS.gene038958.t1 MTR_7g098250 48.529 136 59 3 35 166 262 390 6.72e-34 131
MS.gene038958.t1 MTR_7g115530 41.772 158 81 3 35 189 218 367 1.91e-33 129
MS.gene038958.t1 MTR_1g080330 45.070 142 75 2 25 166 165 303 5.42e-33 127
MS.gene038958.t1 MTR_1g053835 43.571 140 74 1 31 170 254 388 2.67e-30 120
MS.gene038958.t1 MTR_7g093030 37.640 178 98 5 31 201 208 379 1.97e-28 114
MS.gene038958.t1 MTR_7g068600 45.455 132 66 2 35 163 13 141 1.04e-26 106
MS.gene038958.t1 MTR_1g080330 45.455 121 63 2 25 145 165 282 1.62e-25 104
MS.gene038958.t1 MTR_1g053800 38.462 156 84 2 25 176 167 314 3.07e-25 104
MS.gene038958.t1 MTR_7g115530 44.737 114 54 2 35 145 218 325 1.04e-24 103
MS.gene038958.t1 MTR_1g090670 42.361 144 63 5 67 194 1 140 4.95e-20 88.2
MS.gene038958.t1 MTR_7g115530 63.158 57 21 0 35 91 218 274 8.76e-20 89.0
MS.gene038958.t1 MTR_7g115530 63.158 57 21 0 35 91 218 274 3.08e-19 88.2
MS.gene038958.t1 MTR_7g093030 54.098 61 28 0 31 91 208 268 2.87e-18 84.7
MS.gene038958.t1 MTR_7g115530 66.038 53 18 0 35 87 218 270 3.20e-18 84.0
MS.gene038958.t1 MTR_7g115530 66.667 51 17 0 35 85 218 268 2.51e-17 82.0
MS.gene038958.t1 MTR_2g023580 61.404 57 22 0 36 92 56 112 3.29e-16 77.8
MS.gene038958.t1 MTR_0223s0040 39.062 128 58 3 36 143 19 146 5.85e-16 77.8
MS.gene038958.t1 MTR_3g450310 61.111 54 21 0 35 88 19 72 7.71e-16 76.3
MS.gene038958.t1 MTR_6g071625 56.667 60 26 0 36 95 203 262 2.92e-15 76.6
MS.gene038958.t1 MTR_7g069660 44.444 81 45 0 11 91 47 127 3.39e-15 76.3
MS.gene038958.t1 MTR_1g112370 56.452 62 22 1 36 92 23 84 4.93e-15 75.9
MS.gene038958.t1 MTR_3g064840 51.429 70 34 0 36 105 275 344 5.08e-15 76.6
MS.gene038958.t1 MTR_1g021520 52.239 67 32 0 36 102 127 193 7.29e-15 74.7
MS.gene038958.t1 MTR_8g066310 58.929 56 23 0 36 91 174 229 7.94e-15 75.5
MS.gene038958.t1 MTR_1g053830 49.091 55 28 0 37 91 20 74 8.86e-15 70.1
MS.gene038958.t1 MTR_5g029470 58.929 56 23 0 36 91 220 275 1.10e-14 75.1
MS.gene038958.t1 MTR_5g041350 69.565 46 14 0 130 175 8 53 3.45e-14 72.0
MS.gene038958.t1 MTR_8g086410 53.571 56 26 0 36 91 112 167 4.80e-14 73.6
MS.gene038958.t1 MTR_8g086410 53.571 56 26 0 36 91 110 165 5.04e-14 73.6
MS.gene038958.t1 MTR_5g041350 69.565 46 14 0 130 175 30 75 6.12e-14 71.6
MS.gene038958.t1 MTR_2g016220 55.357 56 25 0 36 91 90 145 8.30e-14 72.4
MS.gene038958.t1 MTR_2g016220 55.357 56 25 0 36 91 90 145 8.71e-14 72.4
MS.gene038958.t1 MTR_2g084230 55.357 56 25 0 36 91 98 153 8.93e-14 72.4
MS.gene038958.t1 MTR_2g084230 55.357 56 25 0 36 91 98 153 9.03e-14 71.6
MS.gene038958.t1 MTR_4g121020 59.322 59 23 1 31 89 107 164 9.38e-14 72.8
MS.gene038958.t1 MTR_4g121020 59.322 59 23 1 31 89 211 268 1.11e-13 72.8
MS.gene038958.t1 MTR_4g121020 59.322 59 23 1 31 89 211 268 1.12e-13 72.8
MS.gene038958.t1 MTR_7g093010 36.364 132 72 4 35 161 213 337 1.23e-13 71.6
MS.gene038958.t1 MTR_1g032570 61.818 55 20 1 35 89 131 184 2.53e-13 71.6
MS.gene038958.t1 MTR_1g032570 61.818 55 20 1 35 89 200 253 3.02e-13 71.6
MS.gene038958.t1 MTR_8g086410 56.000 50 22 0 36 85 112 161 7.20e-13 70.1
MS.gene038958.t1 MTR_2g016220 58.000 50 21 0 36 85 90 139 9.42e-13 69.3
MS.gene038958.t1 MTR_4g064730 52.174 69 31 2 22 89 117 184 1.01e-12 68.6
MS.gene038958.t1 MTR_1g093080 60.000 55 22 0 35 89 211 265 1.33e-12 68.9
MS.gene038958.t1 MTR_2g034960 53.333 60 27 1 30 89 206 264 1.40e-12 69.3
MS.gene038958.t1 MTR_7g089010 60.000 55 21 1 35 89 91 144 2.12e-12 67.4
MS.gene038958.t1 MTR_5g017980 60.000 55 22 0 35 89 193 247 3.26e-12 67.4
MS.gene038958.t1 MTR_4g021790 52.542 59 27 1 31 89 164 221 1.20e-11 65.1
MS.gene038958.t1 MTR_5g054300 58.182 55 23 0 35 89 198 252 1.76e-11 65.5
MS.gene038958.t1 MTR_4g086835 55.172 58 26 0 32 89 271 328 7.39e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038958.t1 AT1G79430 56.378 392 117 15 4 375 1 358 3.36e-123 360
MS.gene038958.t1 AT1G79430 50.765 327 109 14 67 375 1 293 6.49e-80 247
MS.gene038958.t1 AT3G12730 71.711 152 38 3 24 170 12 163 3.86e-70 220
MS.gene038958.t1 AT4G13640 64.634 164 49 1 25 179 27 190 4.96e-64 206
MS.gene038958.t1 AT3G24120 67.702 161 35 4 24 171 30 186 9.64e-63 203
MS.gene038958.t1 AT4G13640 63.473 167 49 2 25 179 27 193 6.65e-62 201
MS.gene038958.t1 AT3G24120 66.463 164 35 5 24 171 30 189 1.40e-60 197
MS.gene038958.t1 AT3G04030 60.355 169 53 4 24 179 34 201 4.93e-57 191
MS.gene038958.t1 AT5G18240 60.947 169 52 4 24 179 34 201 2.14e-56 189
MS.gene038958.t1 AT5G18240 60.947 169 52 4 24 179 34 201 2.14e-56 189
MS.gene038958.t1 AT3G04030 59.172 169 54 5 24 179 34 200 5.69e-54 183
MS.gene038958.t1 AT5G18240 59.763 169 52 5 24 179 34 199 4.70e-53 181
MS.gene038958.t1 AT3G04030 57.396 169 52 5 24 179 34 195 1.89e-50 174
MS.gene038958.t1 AT5G18240 57.988 169 51 5 24 179 34 195 7.77e-50 172
MS.gene038958.t1 AT5G18240 57.988 169 51 5 24 179 34 195 7.77e-50 172
MS.gene038958.t1 AT1G69580 46.117 206 83 6 27 215 26 220 1.74e-48 167
MS.gene038958.t1 AT1G69580 45.631 206 85 5 27 215 26 221 2.72e-48 167
MS.gene038958.t1 AT5G45580 47.853 163 68 2 25 171 13 174 1.35e-43 152
MS.gene038958.t1 AT5G45580 43.716 183 86 2 29 195 1 182 1.23e-42 150
MS.gene038958.t1 AT2G01060 56.338 142 53 3 35 173 15 150 1.49e-42 150
MS.gene038958.t1 AT3G12730 64.220 109 34 3 67 170 1 109 2.41e-39 138
MS.gene038958.t1 AT3G13040 44.785 163 75 5 21 170 218 378 4.24e-34 131
MS.gene038958.t1 AT3G13040 44.785 163 75 5 21 170 218 378 4.24e-34 131
MS.gene038958.t1 AT3G13040 44.785 163 75 5 21 170 218 378 4.24e-34 131
MS.gene038958.t1 AT5G06800 46.269 134 69 2 35 166 192 324 1.08e-31 123
MS.gene038958.t1 AT4G28610 45.588 136 64 3 35 166 225 354 1.65e-31 123
MS.gene038958.t1 AT5G06800 47.368 133 64 3 35 166 192 319 4.81e-31 121
MS.gene038958.t1 AT5G29000 40.964 166 93 4 35 199 188 349 7.73e-31 121
MS.gene038958.t1 AT5G29000 40.964 166 93 4 35 199 188 349 7.73e-31 121
MS.gene038958.t1 AT5G29000 40.964 166 93 4 35 199 231 392 1.41e-30 121
MS.gene038958.t1 AT3G04030 54.762 126 43 4 67 179 1 125 6.39e-30 117
MS.gene038958.t1 AT3G04450 40.000 155 79 3 35 183 198 344 2.01e-29 117
MS.gene038958.t1 AT3G04450 40.000 155 79 3 35 183 198 344 2.01e-29 117
MS.gene038958.t1 AT3G04450 40.000 155 79 3 35 183 238 384 2.55e-29 118
MS.gene038958.t1 AT2G20400 42.000 150 79 3 35 181 231 375 2.25e-26 109
MS.gene038958.t1 AT2G20400 41.333 150 79 2 35 181 231 374 6.01e-26 108
MS.gene038958.t1 AT3G04030 50.794 126 42 5 67 179 1 119 1.14e-23 100
MS.gene038958.t1 AT5G18240 50.794 126 42 5 67 179 1 119 2.91e-23 99.4
MS.gene038958.t1 AT2G06020 59.375 64 26 0 28 91 79 142 8.35e-21 92.0
MS.gene038958.t1 AT2G01060 48.598 107 46 3 70 173 1 101 2.34e-20 89.4
MS.gene038958.t1 AT5G06800 59.649 57 23 0 35 91 192 248 3.05e-18 84.3
MS.gene038958.t1 AT5G29000 57.895 57 24 0 35 91 231 287 3.09e-17 82.0
MS.gene038958.t1 AT3G04450 56.140 57 25 0 35 91 238 294 3.28e-17 82.0
MS.gene038958.t1 AT1G14600 50.685 73 31 1 21 88 4 76 2.00e-16 78.6
MS.gene038958.t1 AT2G40260 60.714 56 22 0 36 91 83 138 7.44e-16 79.0
MS.gene038958.t1 AT4G04605 58.491 53 22 0 36 88 15 67 9.79e-16 75.9
MS.gene038958.t1 AT2G42660 58.929 56 23 0 36 91 51 106 1.02e-15 76.6
MS.gene038958.t1 AT2G02060 57.627 59 25 0 34 92 28 86 2.51e-15 75.5
MS.gene038958.t1 AT2G02060 57.627 59 25 0 34 92 28 86 2.51e-15 75.5
MS.gene038958.t1 AT5G16560 56.667 60 26 0 36 95 220 279 7.00e-15 75.9
MS.gene038958.t1 AT1G32240 56.667 60 26 0 36 95 214 273 7.29e-15 75.5
MS.gene038958.t1 AT1G32240 56.667 60 26 0 36 95 214 273 8.42e-15 75.5
MS.gene038958.t1 AT2G38300 57.143 56 24 0 36 91 55 110 1.60e-14 74.3
MS.gene038958.t1 AT5G42630 57.143 56 24 0 36 91 106 161 1.63e-14 72.8
MS.gene038958.t1 AT5G42630 57.143 56 24 0 36 91 106 161 2.49e-14 73.2
MS.gene038958.t1 AT4G17695 32.727 110 74 0 36 145 165 274 3.18e-14 73.2
MS.gene038958.t1 AT3G46640 54.286 70 28 2 23 89 129 197 2.10e-13 70.9
MS.gene038958.t1 AT3G46640 54.286 70 28 2 23 89 129 197 2.10e-13 70.9
MS.gene038958.t1 AT3G46640 54.286 70 28 2 23 89 129 197 2.70e-13 70.5
MS.gene038958.t1 AT5G59570 52.857 70 29 2 23 89 126 194 4.51e-13 69.7
MS.gene038958.t1 AT5G59570 52.857 70 29 2 23 89 126 194 4.51e-13 69.7
MS.gene038958.t1 AT4G04580 49.123 57 29 0 36 92 15 71 6.54e-13 66.6
MS.gene038958.t1 AT5G05090 60.000 55 21 1 35 89 81 134 7.54e-13 68.6
MS.gene038958.t1 AT3G10760 60.000 55 21 1 35 89 105 158 9.26e-13 68.9
MS.gene038958.t1 AT4G37180 55.172 58 26 0 37 94 212 269 1.46e-12 68.6
MS.gene038958.t1 AT4G37180 55.172 58 26 0 37 94 219 276 1.68e-12 68.6
MS.gene038958.t1 AT2G40970 60.000 55 21 1 35 89 105 158 2.30e-12 67.0
MS.gene038958.t1 AT3G16857 56.364 55 23 1 35 89 167 220 5.84e-12 67.4
MS.gene038958.t1 AT3G16857 56.364 55 23 1 35 89 237 290 7.28e-12 67.4
MS.gene038958.t1 AT3G16857 56.364 55 23 1 35 89 237 290 7.39e-12 67.4
MS.gene038958.t1 AT3G25790 60.000 50 20 0 40 89 201 250 8.50e-12 66.2
MS.gene038958.t1 AT5G58080 55.172 58 25 1 32 89 191 247 8.54e-12 67.0
MS.gene038958.t1 AT2G01760 54.545 55 24 1 35 89 135 188 1.06e-11 65.9
MS.gene038958.t1 AT1G49560 60.000 55 22 0 35 89 192 246 1.52e-11 65.5
MS.gene038958.t1 AT2G01760 54.545 55 24 1 35 89 200 253 1.87e-11 65.5
MS.gene038958.t1 AT2G01760 54.545 55 24 1 35 89 228 281 2.67e-11 65.1
MS.gene038958.t1 AT5G44190 40.964 83 41 2 35 117 147 221 4.29e-11 64.3
MS.gene038958.t1 AT5G44190 40.964 83 41 2 35 117 147 221 4.98e-11 63.9
MS.gene038958.t1 AT1G13300 54.545 55 25 0 35 89 181 235 8.58e-11 63.2

Find 97 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGACTATTGAAAGAATT+TGG 0.175321 2.4:+28883396 MS.gene038958:CDS
GATTTAAGGCTTCAAGATTT+AGG 0.193912 2.4:+28883636 MS.gene038958:CDS
TGCTACAACTAATAACTTAA+AGG 0.195092 2.4:+28883341 MS.gene038958:CDS
TAATGTGGAGTGATGATTTA+AGG 0.215191 2.4:+28883622 MS.gene038958:CDS
AAATCATCACTCCACATTAA+TGG 0.218919 2.4:-28883618 None:intergenic
TTTCTATTACATAGAAATTT+AGG 0.227246 2.4:+28882445 MS.gene038958:intron
TTCATAGTTGAAGGCTTCTT+TGG 0.249952 2.4:-28881798 None:intergenic
AACTTAAAGGGCGTTGTTCT+TGG 0.261188 2.4:+28883354 MS.gene038958:CDS
CCACTATAAGGGTTAGTGTT+AGG 0.267537 2.4:-28883582 None:intergenic
GCATATATGCATGATGATCT+AGG 0.285163 2.4:-28883518 None:intergenic
ATTTAAGGCTTCAAGATTTA+GGG 0.292742 2.4:+28883637 MS.gene038958:CDS
AATCATCACTCCACATTAAT+GGG 0.299412 2.4:-28883617 None:intergenic
TAAAACTATCATGAGGGTTA+TGG 0.306320 2.4:+28882077 MS.gene038958:CDS
GAAATACATGCAAAGTATAT+TGG 0.312337 2.4:+28883278 MS.gene038958:CDS
TGAAGAGATGTCCCTCTTCT+TGG 0.326046 2.4:-28883843 None:intergenic
ATTCAATGATCACTCAATTA+AGG 0.327183 2.4:+28882491 MS.gene038958:CDS
GTCCAACGAAGACGAGGTTT+TGG 0.340512 2.4:-28881879 None:intergenic
TCAAATTGCACCACCATCAT+TGG 0.344106 2.4:+28883704 MS.gene038958:CDS
CCATCTCAAGAGCCATCTTC+AGG 0.344761 2.4:+28882122 MS.gene038958:CDS
CACTATAAGGGTTAGTGTTA+GGG 0.355596 2.4:-28883581 None:intergenic
AAAGCTTATCAGACACTTGC+AGG 0.356175 2.4:+28883303 MS.gene038958:CDS
GCTTCCTCTTCGGCTATGAT+TGG 0.358723 2.4:+28882670 MS.gene038958:CDS
ACCTCATGGAATGGCTGAAA+TGG 0.378868 2.4:+28883377 MS.gene038958:CDS
GAGCTTCAATTCGTAGTTGA+AGG 0.381017 2.4:-28883251 None:intergenic
AAAACTATCATGAGGGTTAT+GGG 0.387308 2.4:+28882078 MS.gene038958:CDS
AAAATTTCCCCTTGAAGTAA+AGG 0.387443 2.4:-28883771 None:intergenic
ACTAACCCTTATAGTGGAAA+TGG 0.388772 2.4:+28883588 MS.gene038958:CDS
CAGCATCAACAAAACGTTCA+TGG 0.392478 2.4:-28881911 None:intergenic
CAAGGTAGAGGCTCACCATT+TGG 0.401119 2.4:+28883909 MS.gene038958:CDS
GATACAAAGCCTTTACTTCA+AGG 0.414154 2.4:+28883762 MS.gene038958:CDS
TCATGTGAATTCATAGTTGA+AGG 0.417635 2.4:-28881807 None:intergenic
TATGATTAGTACCGGTACTA+TGG 0.432902 2.4:+28883884 MS.gene038958:CDS
CCTAACACTAACCCTTATAG+TGG 0.433462 2.4:+28883582 MS.gene038958:CDS
GGCGTTGTTCTTGGACCTCA+TGG 0.435582 2.4:+28883363 MS.gene038958:CDS
ATGAGGGTTATGGGTGTAAA+GGG 0.439033 2.4:+28882087 MS.gene038958:CDS
GTTGATGCTGTTACTCAGCT+TGG 0.442902 2.4:+28881924 MS.gene038958:CDS
CATGAGGGTTATGGGTGTAA+AGG 0.448006 2.4:+28882086 MS.gene038958:CDS
AGGGACAGCTTCATCATGCT+TGG 0.454830 2.4:+28883656 MS.gene038958:CDS
TTTGTATTCAAACCTGAAGA+TGG 0.457979 2.4:-28882134 None:intergenic
TAAGGGTTAGTGTTAGGGTT+AGG 0.458671 2.4:-28883576 None:intergenic
ACGGAATACTGCTTCCTCTT+CGG 0.462582 2.4:+28882660 MS.gene038958:CDS
GCTACAACTAATAACTTAAA+GGG 0.463497 2.4:+28883342 MS.gene038958:CDS
CATATATGCATGATGATCTA+GGG 0.467621 2.4:-28883517 None:intergenic
TGAAAAGATGTAAAACTAAG+AGG 0.472361 2.4:-28883423 None:intergenic
GTGATCATTGAATTCCTTGT+GGG 0.478768 2.4:-28882481 None:intergenic
ACTTAAGCCTTGGCAAGAAA+AGG 0.483728 2.4:+28883553 MS.gene038958:CDS
ATAGTACCGGTACTAATCAT+AGG 0.484489 2.4:-28883882 None:intergenic
CACCACCACCGCCTCCGAAA+AGG 0.487952 2.4:-28883455 None:intergenic
ATAGTTGAAGGCTTCTTTGG+AGG 0.491992 2.4:-28881795 None:intergenic
ATAACTAATTCTCATCCAAA+TGG 0.494435 2.4:-28883924 None:intergenic
GATAGACCCATGTGTGTTCA+AGG 0.496295 2.4:+28881828 MS.gene038958:CDS
ATTACATAGAAATTTAGGCT+TGG 0.496295 2.4:+28882450 MS.gene038958:intron
CCTCATGGAATGGCTGAAAT+GGG 0.498758 2.4:+28883378 MS.gene038958:CDS
ATACAAAGCCTTTACTTCAA+GGG 0.499005 2.4:+28883763 MS.gene038958:CDS
TAGTTGAAGGCTTCTTTGGA+GGG 0.504455 2.4:-28881794 None:intergenic
TGAATTTGATCACCTTTGAA+AGG 0.506520 2.4:-28883684 None:intergenic
ATGGCTCTTGAGATGGTAAA+GGG 0.513730 2.4:-28882115 None:intergenic
ACCCAAAACCTCGTCTTCGT+TGG 0.527604 2.4:+28881877 MS.gene038958:CDS
CATCTATGAATAAACTTGAA+AGG 0.528358 2.4:+28883814 MS.gene038958:CDS
TACAAAGCCTTTACTTCAAG+GGG 0.533890 2.4:+28883764 MS.gene038958:CDS
TCACTTCCTCTATCCAATGA+TGG 0.535417 2.4:-28883717 None:intergenic
GATGGCTCTTGAGATGGTAA+AGG 0.536000 2.4:-28882116 None:intergenic
TGTTCTTGGACCTCATGGAA+TGG 0.536570 2.4:+28883368 MS.gene038958:CDS
GCACCACCATCATTGGATAG+AGG 0.539525 2.4:+28883711 MS.gene038958:CDS
ATCAATGAGAACTTAAGCCT+TGG 0.540269 2.4:+28883543 MS.gene038958:CDS
ATGTGTGTTCAAGGTGACTC+AGG 0.543370 2.4:+28881837 MS.gene038958:CDS
CCTGAAGATGGCTCTTGAGA+TGG 0.549039 2.4:-28882122 None:intergenic
GGTACTATGGCACAAGGTAG+AGG 0.551328 2.4:+28883897 MS.gene038958:CDS
TGCTTGGATGATCCTTTCAA+AGG 0.557843 2.4:+28883672 MS.gene038958:CDS
GATGTCCCTCTTCTTGGTGA+AGG 0.558348 2.4:-28883837 None:intergenic
GATGCTGTTACTCAGCTTGG+AGG 0.559349 2.4:+28881927 MS.gene038958:CDS
CAACTACGAATTGAAGCTCA+AGG 0.565636 2.4:+28883255 MS.gene038958:CDS
ATGCATACTCATTCATGTTG+CGG 0.570245 2.4:-28882693 None:intergenic
GACACTTGCAGGTGAAAACA+TGG 0.571973 2.4:+28883314 MS.gene038958:CDS
ATGAGTCCTATGATTAGTAC+CGG 0.582099 2.4:+28883876 MS.gene038958:CDS
CTTCAGCTTTAGAACTGCAA+CGG 0.582298 2.4:+28882641 MS.gene038958:CDS
TCTACCTTGTGCCATAGTAC+CGG 0.586036 2.4:-28883895 None:intergenic
TGAGTCACCTTGAACACACA+TGG 0.598179 2.4:-28881835 None:intergenic
AATGATCACTCAATTAAGGA+TGG 0.602702 2.4:+28882495 MS.gene038958:CDS
AAAGGCCTTCACCAAGAAGA+GGG 0.609974 2.4:+28883832 MS.gene038958:CDS
TCAATTAAGGATGGTATGAG+AGG 0.611305 2.4:+28882504 MS.gene038958:CDS
GAAAGGCCTTCACCAAGAAG+AGG 0.613827 2.4:+28883831 MS.gene038958:CDS
GCTTGGAAAGCAACCCCACA+AGG 0.615422 2.4:+28882467 MS.gene038958:CDS
CCACTCCTAAAACTATCATG+AGG 0.619863 2.4:+28882070 MS.gene038958:CDS
ACTTGACCTTCAGCAAAACA+TGG 0.622471 2.4:+28883485 MS.gene038958:CDS
TGATCATTGAATTCCTTGTG+GGG 0.623211 2.4:-28882480 None:intergenic
AACTACGAATTGAAGCTCAA+GGG 0.632870 2.4:+28883256 MS.gene038958:CDS
CACTCCTAAAACTATCATGA+GGG 0.634268 2.4:+28882071 MS.gene038958:CDS
AGTGATCATTGAATTCCTTG+TGG 0.639862 2.4:-28882482 None:intergenic
TCAACAGTCCAACGAAGACG+AGG 0.644546 2.4:-28881885 None:intergenic
TGTAATCAGGATGCAAATTG+AGG 0.645996 2.4:+28882908 MS.gene038958:intron
CCCATTTCAGCCATTCCATG+AGG 0.656331 2.4:-28883378 None:intergenic
CTTCCTCTATCCAATGATGG+TGG 0.659128 2.4:-28883714 None:intergenic
GCGGCCAATCATAGCCGAAG+AGG 0.663510 2.4:-28882674 None:intergenic
AAGACTACATGAGCAACTTG+AGG 0.669000 2.4:+28882938 MS.gene038958:CDS
GAGTCACCTTGAACACACAT+GGG 0.682407 2.4:-28881834 None:intergenic
AGTACCGGTACTATGGCACA+AGG 0.722289 2.4:+28883891 MS.gene038958:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAAAAAAAAATT+TGG - chr2.4:28882554-28882573 None:intergenic 0.0%
!!! CTTTTTGTTATTTTTATATT+TGG + chr2.4:28882002-28882021 MS.gene038958:intron 10.0%
!!! TTTTAATTTTTTGAACTTTA+TGG + chr2.4:28882562-28882581 MS.gene038958:intron 10.0%
!! ATACTAATTATGTAACAAAT+TGG - chr2.4:28883176-28883195 None:intergenic 15.0%
!! TTAAAATAAGAGATGTATAA+TGG - chr2.4:28882734-28882753 None:intergenic 15.0%
!! TTTCTATTACATAGAAATTT+AGG + chr2.4:28882445-28882464 MS.gene038958:intron 15.0%
!!! TACATAATTAGTATTTTCAA+TGG + chr2.4:28883182-28883201 MS.gene038958:intron 15.0%
!!! TGATTTGAATCTTTTTTTTA+TGG + chr2.4:28882346-28882365 MS.gene038958:intron 15.0%
!!! TTTTTTATGGTTAATTTTTC+AGG + chr2.4:28882359-28882378 MS.gene038958:intron 15.0%
!! ATAATACATAATCATGTGTA+AGG - chr2.4:28882589-28882608 None:intergenic 20.0%
!! CATTACTAAGATATTTATGA+TGG + chr2.4:28882027-28882046 MS.gene038958:intron 20.0%
!! TGAATTTAGTTGTATATTTC+AGG + chr2.4:28883218-28883237 MS.gene038958:intron 20.0%
!! TTCTTTACAACACTTTAATA+TGG + chr2.4:28882194-28882213 MS.gene038958:intron 20.0%
!! TTTATAAGTGCACATATATT+TGG + chr2.4:28882998-28883017 MS.gene038958:intron 20.0%
!!! CAGCAAAATAATTTTTAACT+GGG - chr2.4:28882304-28882323 None:intergenic 20.0%
!!! TTGTTTTGAATCTTTTTGTT+GGG + chr2.4:28882817-28882836 MS.gene038958:intron 20.0%
!!! TTTGTTTTGAATCTTTTTGT+TGG + chr2.4:28882816-28882835 MS.gene038958:intron 20.0%
! AATTGTATATATAGTGCATC+CGG + chr2.4:28883139-28883158 MS.gene038958:intron 25.0%
! ATTACATAGAAATTTAGGCT+TGG + chr2.4:28882450-28882469 MS.gene038958:intron 25.0%
! ATTCAATGATCACTCAATTA+AGG + chr2.4:28882491-28882510 MS.gene038958:CDS 25.0%
! ATTGACAAGATCTTTACATA+TGG + chr2.4:28882615-28882634 MS.gene038958:intron 25.0%
! CATCTATGAATAAACTTGAA+AGG + chr2.4:28883814-28883833 MS.gene038958:CDS 25.0%
! CTATGTAATAGAAACAACAA+AGG - chr2.4:28882439-28882458 None:intergenic 25.0%
! GAAATACATGCAAAGTATAT+TGG + chr2.4:28883278-28883297 MS.gene038958:CDS 25.0%
! GCTACAACTAATAACTTAAA+GGG + chr2.4:28883342-28883361 MS.gene038958:CDS 25.0%
! TGAAAAGATGTAAAACTAAG+AGG - chr2.4:28883426-28883445 None:intergenic 25.0%
! TGCTACAACTAATAACTTAA+AGG + chr2.4:28883341-28883360 MS.gene038958:CDS 25.0%
! TTTGAGAAGAGAAAGAAAAA+AGG - chr2.4:28881978-28881997 None:intergenic 25.0%
!! ATTTAAGGCTTCAAGATTTA+GGG + chr2.4:28883637-28883656 MS.gene038958:CDS 25.0%
!! GCAGCAAAATAATTTTTAAC+TGG - chr2.4:28882305-28882324 None:intergenic 25.0%
!! TTTTTCCATTTCCACTATAA+GGG - chr2.4:28883596-28883615 None:intergenic 25.0%
!!! TAAAAATTATTTTGCTGCAC+CGG + chr2.4:28882307-28882326 MS.gene038958:intron 25.0%
!!! TGGTTTCTTAAATTTTTCAG+AGG + chr2.4:28882047-28882066 MS.gene038958:intron 25.0%
!!! TGTTTTGAATCTTTTTGTTG+GGG + chr2.4:28882818-28882837 MS.gene038958:intron 25.0%
!!! TTTTTTCCATTTCCACTATA+AGG - chr2.4:28883597-28883616 None:intergenic 25.0%
AAAACTATCATGAGGGTTAT+GGG + chr2.4:28882078-28882097 MS.gene038958:CDS 30.0%
AAAATTTCCCCTTGAAGTAA+AGG - chr2.4:28883774-28883793 None:intergenic 30.0%
AAATCATCACTCCACATTAA+TGG - chr2.4:28883621-28883640 None:intergenic 30.0%
AATCATCACTCCACATTAAT+GGG - chr2.4:28883620-28883639 None:intergenic 30.0%
AATGATCACTCAATTAAGGA+TGG + chr2.4:28882495-28882514 MS.gene038958:CDS 30.0%
ATACAAAGCCTTTACTTCAA+GGG + chr2.4:28883763-28883782 MS.gene038958:CDS 30.0%
ATGGAAAAAACCCATTAATG+TGG + chr2.4:28883607-28883626 MS.gene038958:CDS 30.0%
ATGGGACTATTGAAAGAATT+TGG + chr2.4:28883396-28883415 MS.gene038958:CDS 30.0%
CATATATGCATGATGATCTA+GGG - chr2.4:28883520-28883539 None:intergenic 30.0%
CTTGTACAAAAATTTGCAAC+CGG + chr2.4:28882261-28882280 MS.gene038958:intron 30.0%
GTTTGACGAAATTATAACGA+TGG + chr2.4:28883032-28883051 MS.gene038958:intron 30.0%
TAAAACTATCATGAGGGTTA+TGG + chr2.4:28882077-28882096 MS.gene038958:CDS 30.0%
TAATGTGGAGTGATGATTTA+AGG + chr2.4:28883622-28883641 MS.gene038958:CDS 30.0%
TCATGTGAATTCATAGTTGA+AGG - chr2.4:28881810-28881829 None:intergenic 30.0%
TGAATTTGATCACCTTTGAA+AGG - chr2.4:28883687-28883706 None:intergenic 30.0%
TTGAAAAACTATGCACTTTG+AGG - chr2.4:28883076-28883095 None:intergenic 30.0%
TTGAATTAGTAACTCACACA+AGG + chr2.4:28882881-28882900 MS.gene038958:intron 30.0%
TTTGTATTCAAACCTGAAGA+TGG - chr2.4:28882137-28882156 None:intergenic 30.0%
! AAGAGATGTATAATGGAAGA+AGG - chr2.4:28882727-28882746 None:intergenic 30.0%
! AGAGATGTATAATGGAAGAA+GGG - chr2.4:28882726-28882745 None:intergenic 30.0%
! ATAACCCTCATGATAGTTTT+AGG - chr2.4:28882078-28882097 None:intergenic 30.0%
! GATTTAAGGCTTCAAGATTT+AGG + chr2.4:28883636-28883655 MS.gene038958:CDS 30.0%
! TGCACATATATTTGGAATCA+TGG + chr2.4:28883006-28883025 MS.gene038958:intron 30.0%
! TTACTTCAAGGGGAAATTTT+AGG + chr2.4:28883774-28883793 MS.gene038958:CDS 30.0%
! TTTCAAGATCTTGACCTTTT+CGG + chr2.4:28883441-28883460 MS.gene038958:CDS 30.0%
!! GTTTTGAATCTTTTTGTTGG+GGG + chr2.4:28882819-28882838 MS.gene038958:intron 30.0%
!!! TTTGTTTTGGAATGTATGTG+TGG + chr2.4:28882852-28882871 MS.gene038958:intron 30.0%
AACTACGAATTGAAGCTCAA+GGG + chr2.4:28883256-28883275 MS.gene038958:CDS 35.0%
AGTGATCATTGAATTCCTTG+TGG - chr2.4:28882485-28882504 None:intergenic 35.0%
ATCAATGAGAACTTAAGCCT+TGG + chr2.4:28883543-28883562 MS.gene038958:CDS 35.0%
ATGAGTCCTATGATTAGTAC+CGG + chr2.4:28883876-28883895 MS.gene038958:CDS 35.0%
ATGCATACTCATTCATGTTG+CGG - chr2.4:28882696-28882715 None:intergenic 35.0%
CACTCCTAAAACTATCATGA+GGG + chr2.4:28882071-28882090 MS.gene038958:CDS 35.0%
GAGAAGAGAAAGAAAAAAGG+TGG - chr2.4:28881975-28881994 None:intergenic 35.0%
GATACAAAGCCTTTACTTCA+AGG + chr2.4:28883762-28883781 MS.gene038958:CDS 35.0%
GCATATATGCATGATGATCT+AGG - chr2.4:28883521-28883540 None:intergenic 35.0%
GTGATCATTGAATTCCTTGT+GGG - chr2.4:28882484-28882503 None:intergenic 35.0%
TACAAAGCCTTTACTTCAAG+GGG + chr2.4:28883764-28883783 MS.gene038958:CDS 35.0%
TCAATTAAGGATGGTATGAG+AGG + chr2.4:28882504-28882523 MS.gene038958:CDS 35.0%
TGATCATTGAATTCCTTGTG+GGG - chr2.4:28882483-28882502 None:intergenic 35.0%
TGTAATCAGGATGCAAATTG+AGG + chr2.4:28882908-28882927 MS.gene038958:intron 35.0%
TTCATAGTTGAAGGCTTCTT+TGG - chr2.4:28881801-28881820 None:intergenic 35.0%
! ACTAACCCTTATAGTGGAAA+TGG + chr2.4:28883588-28883607 MS.gene038958:CDS 35.0%
! CACTATAAGGGTTAGTGTTA+GGG - chr2.4:28883584-28883603 None:intergenic 35.0%
! GTATAATGGAAGAAGGGAAT+TGG - chr2.4:28882720-28882739 None:intergenic 35.0%
! GTGACACTTCTTTTCTTTCT+AGG + chr2.4:28882526-28882545 MS.gene038958:intron 35.0%
! TTTGAGGTTGAACGAAATCA+CGG - chr2.4:28883060-28883079 None:intergenic 35.0%
!! ATAGTACCGGTACTAATCAT+AGG - chr2.4:28883885-28883904 None:intergenic 35.0%
!! ATCCTTTGAAACCAGTTGTA+CGG + chr2.4:28883109-28883128 MS.gene038958:intron 35.0%
!! CAAATTGGATTCTCTAAAGC+CGG - chr2.4:28883161-28883180 None:intergenic 35.0%
!! TATGATTAGTACCGGTACTA+TGG + chr2.4:28883884-28883903 MS.gene038958:CDS 35.0%
AAAGCTTATCAGACACTTGC+AGG + chr2.4:28883303-28883322 MS.gene038958:CDS 40.0%
AAGACTACATGAGCAACTTG+AGG + chr2.4:28882938-28882957 MS.gene038958:CDS 40.0%
AATCATCTCCTACGATGCAA+AGG + chr2.4:28882224-28882243 MS.gene038958:intron 40.0%
ACTTAAGCCTTGGCAAGAAA+AGG + chr2.4:28883553-28883572 MS.gene038958:CDS 40.0%
ACTTGACCTTCAGCAAAACA+TGG + chr2.4:28883485-28883504 MS.gene038958:CDS 40.0%
ATAGTTGAAGGCTTCTTTGG+AGG - chr2.4:28881798-28881817 None:intergenic 40.0%
ATGAGGGTTATGGGTGTAAA+GGG + chr2.4:28882087-28882106 MS.gene038958:CDS 40.0%
ATGGCTCTTGAGATGGTAAA+GGG - chr2.4:28882118-28882137 None:intergenic 40.0%
CAACTACGAATTGAAGCTCA+AGG + chr2.4:28883255-28883274 MS.gene038958:CDS 40.0%
CAGCATCAACAAAACGTTCA+TGG - chr2.4:28881914-28881933 None:intergenic 40.0%
CCACTCCTAAAACTATCATG+AGG + chr2.4:28882070-28882089 MS.gene038958:CDS 40.0%
CCTAACACTAACCCTTATAG+TGG + chr2.4:28883582-28883601 MS.gene038958:CDS 40.0%
GAGCTTCAATTCGTAGTTGA+AGG - chr2.4:28883254-28883273 None:intergenic 40.0%
GGACAACATACTACTGTATC+CGG - chr2.4:28882283-28882302 None:intergenic 40.0%
GGTGAAAGAATAGTACTGTC+AGG - chr2.4:28881954-28881973 None:intergenic 40.0%
TAGTTGAAGGCTTCTTTGGA+GGG - chr2.4:28881797-28881816 None:intergenic 40.0%
TCAAATTGCACCACCATCAT+TGG + chr2.4:28883704-28883723 MS.gene038958:CDS 40.0%
TCACTTCCTCTATCCAATGA+TGG - chr2.4:28883720-28883739 None:intergenic 40.0%
TGCTTGGATGATCCTTTCAA+AGG + chr2.4:28883672-28883691 MS.gene038958:CDS 40.0%
! CAACTGGTTTCAAAGGATCT+AGG - chr2.4:28883107-28883126 None:intergenic 40.0%
! CCACTATAAGGGTTAGTGTT+AGG - chr2.4:28883585-28883604 None:intergenic 40.0%
! TAAGGGTTAGTGTTAGGGTT+AGG - chr2.4:28883579-28883598 None:intergenic 40.0%
!! AACTTAAAGGGCGTTGTTCT+TGG + chr2.4:28883354-28883373 MS.gene038958:CDS 40.0%
!! CACACAAGGTTGATGTAATC+AGG + chr2.4:28882895-28882914 MS.gene038958:intron 40.0%
!! CTTCAGCTTTAGAACTGCAA+CGG + chr2.4:28882641-28882660 MS.gene038958:CDS 40.0%
!! GGGTGAGGAGATTTTTGTTT+TGG + chr2.4:28882839-28882858 MS.gene038958:intron 40.0%
!!! CCTCATGATAGTTTTAGGAG+TGG - chr2.4:28882073-28882092 None:intergenic 40.0%
AAAGGCCTTCACCAAGAAGA+GGG + chr2.4:28883832-28883851 MS.gene038958:CDS 45.0%
AATTGACTGCACCGTACAAC+TGG - chr2.4:28883123-28883142 None:intergenic 45.0%
ACCTCATGGAATGGCTGAAA+TGG + chr2.4:28883377-28883396 MS.gene038958:CDS 45.0%
ACGGAATACTGCTTCCTCTT+CGG + chr2.4:28882660-28882679 MS.gene038958:CDS 45.0%
ATGTGTGTTCAAGGTGACTC+AGG + chr2.4:28881837-28881856 MS.gene038958:CDS 45.0%
CATGAGGGTTATGGGTGTAA+AGG + chr2.4:28882086-28882105 MS.gene038958:CDS 45.0%
CCTCATGGAATGGCTGAAAT+GGG + chr2.4:28883378-28883397 MS.gene038958:CDS 45.0%
CTTCCTCTATCCAATGATGG+TGG - chr2.4:28883717-28883736 None:intergenic 45.0%
GACACTTGCAGGTGAAAACA+TGG + chr2.4:28883314-28883333 MS.gene038958:CDS 45.0%
GAGTCACCTTGAACACACAT+GGG - chr2.4:28881837-28881856 None:intergenic 45.0%
GATAGACCCATGTGTGTTCA+AGG + chr2.4:28881828-28881847 MS.gene038958:CDS 45.0%
GATGGCTCTTGAGATGGTAA+AGG - chr2.4:28882119-28882138 None:intergenic 45.0%
GTTGATGCTGTTACTCAGCT+TGG + chr2.4:28881924-28881943 MS.gene038958:CDS 45.0%
TCTACCTTGTGCCATAGTAC+CGG - chr2.4:28883898-28883917 None:intergenic 45.0%
TGAAGAGATGTCCCTCTTCT+TGG - chr2.4:28883846-28883865 None:intergenic 45.0%
TGAGTCACCTTGAACACACA+TGG - chr2.4:28881838-28881857 None:intergenic 45.0%
TGTTCTTGGACCTCATGGAA+TGG + chr2.4:28883368-28883387 MS.gene038958:CDS 45.0%
! CAAGATCTTGACCTTTTCGG+AGG + chr2.4:28883444-28883463 MS.gene038958:CDS 45.0%
! CACCGTACAACTGGTTTCAA+AGG - chr2.4:28883114-28883133 None:intergenic 45.0%
! GAATCTTTTTGTTGGGGGTG+AGG + chr2.4:28882824-28882843 MS.gene038958:intron 45.0%
! GCTTGTCCATGTTTTGCTGA+AGG - chr2.4:28883494-28883513 None:intergenic 45.0%
! TCCAACGAAGACGAGGTTTT+GGG - chr2.4:28881881-28881900 None:intergenic 45.0%
!! AAACAATAAAAAAAAAAAAA+AGG - chr2.4:28882414-28882433 None:intergenic 5.0%
ACCCAAAACCTCGTCTTCGT+TGG + chr2.4:28881877-28881896 MS.gene038958:CDS 50.0%
AGGGACAGCTTCATCATGCT+TGG + chr2.4:28883656-28883675 MS.gene038958:CDS 50.0%
CAAGGTAGAGGCTCACCATT+TGG + chr2.4:28883909-28883928 MS.gene038958:CDS 50.0%
CCATCTCAAGAGCCATCTTC+AGG + chr2.4:28882122-28882141 MS.gene038958:CDS 50.0%
CCCATTTCAGCCATTCCATG+AGG - chr2.4:28883381-28883400 None:intergenic 50.0%
CCTGAAGATGGCTCTTGAGA+TGG - chr2.4:28882125-28882144 None:intergenic 50.0%
GAAAGGCCTTCACCAAGAAG+AGG + chr2.4:28883831-28883850 MS.gene038958:CDS 50.0%
GATGCTGTTACTCAGCTTGG+AGG + chr2.4:28881927-28881946 MS.gene038958:CDS 50.0%
GATGTCCCTCTTCTTGGTGA+AGG - chr2.4:28883840-28883859 None:intergenic 50.0%
GCACCACCATCATTGGATAG+AGG + chr2.4:28883711-28883730 MS.gene038958:CDS 50.0%
GCTTCCTCTTCGGCTATGAT+TGG + chr2.4:28882670-28882689 MS.gene038958:CDS 50.0%
GGTACTATGGCACAAGGTAG+AGG + chr2.4:28883897-28883916 MS.gene038958:CDS 50.0%
TCAACAGTCCAACGAAGACG+AGG - chr2.4:28881888-28881907 None:intergenic 50.0%
TTGCTGCACCTTTGCATCGT+AGG - chr2.4:28882235-28882254 None:intergenic 50.0%
! GATCTTGACCTTTTCGGAGG+CGG + chr2.4:28883447-28883466 MS.gene038958:CDS 50.0%
! GGTTAGGCCTTTTCTTGCCA+AGG - chr2.4:28883563-28883582 None:intergenic 50.0%
! GTCCAACGAAGACGAGGTTT+TGG - chr2.4:28881882-28881901 None:intergenic 50.0%
!! AGTACCGGTACTATGGCACA+AGG + chr2.4:28883891-28883910 MS.gene038958:CDS 50.0%
GCTTGGAAAGCAACCCCACA+AGG + chr2.4:28882467-28882486 MS.gene038958:CDS 55.0%
GGCGTTGTTCTTGGACCTCA+TGG + chr2.4:28883363-28883382 MS.gene038958:CDS 55.0%
GCGGCCAATCATAGCCGAAG+AGG - chr2.4:28882677-28882696 None:intergenic 60.0%
TCATCTCTCACGCTGCGCAC+CGG - chr2.4:28882329-28882348 None:intergenic 60.0%
! CTTGACCTTTTCGGAGGCGG+TGG + chr2.4:28883450-28883469 MS.gene038958:CDS 60.0%
CACCACCACCGCCTCCGAAA+AGG - chr2.4:28883458-28883477 None:intergenic 65.0%
! GACCTTTTCGGAGGCGGTGG+TGG + chr2.4:28883453-28883472 MS.gene038958:CDS 65.0%
!! CTTTTCGGAGGCGGTGGTGG+TGG + chr2.4:28883456-28883475 MS.gene038958:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 28881780 28883935 28881780 ID=MS.gene038958
chr2.4 mRNA 28881780 28883935 28881780 ID=MS.gene038958.t1;Parent=MS.gene038958
chr2.4 exon 28881780 28881957 28881780 ID=MS.gene038958.t1.exon1;Parent=MS.gene038958.t1
chr2.4 CDS 28881780 28881957 28881780 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
chr2.4 exon 28882067 28882143 28882067 ID=MS.gene038958.t1.exon2;Parent=MS.gene038958.t1
chr2.4 CDS 28882067 28882143 28882067 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
chr2.4 exon 28882459 28882525 28882459 ID=MS.gene038958.t1.exon3;Parent=MS.gene038958.t1
chr2.4 CDS 28882459 28882525 28882459 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
chr2.4 exon 28882641 28882707 28882641 ID=MS.gene038958.t1.exon4;Parent=MS.gene038958.t1
chr2.4 CDS 28882641 28882707 28882641 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
chr2.4 exon 28882917 28882959 28882917 ID=MS.gene038958.t1.exon5;Parent=MS.gene038958.t1
chr2.4 CDS 28882917 28882959 28882917 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
chr2.4 exon 28883240 28883935 28883240 ID=MS.gene038958.t1.exon6;Parent=MS.gene038958.t1
chr2.4 CDS 28883240 28883935 28883240 ID=cds.MS.gene038958.t1;Parent=MS.gene038958.t1
Gene Sequence

>MS.gene038958

ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGACCTGACAGTACTATTCTTTCACCACCTTTTTTCTTTCTCTTCTCAAACACTCTTTTTGTTATTTTTATATTTGGATCATTACTAAGATATTTATGATGGTTTCTTAAATTTTTCAGAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTAAAGGGTCTTACCCTTTACCATCTCAAGAGCCATCTTCAGGTTTGAATACAAAAAAAAAAAAAAATCATTTCAACTTCTTTTTTGCTTTTTTCTTTACAACACTTTAATATGGACTCAGAAATCATCTCCTACGATGCAAAGGTGCAGCAAAATTTACTTGTACAAAAATTTGCAACCGGATACAGTAGTATGTTGTCCCAGTTAAAAATTATTTTGCTGCACCGGTGCGCAGCGTGAGAGATGATTTGAATCTTTTTTTTATGGTTAATTTTTCAGGTTGATTTGAGTCTCTCTCTTAATTTATATCCTTTTTTTTTTTTTTATTGTTTTTCCTTTGTTGTTTCTATTACATAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGGTGACACTTCTTTTCTTTCTAGGTTCCAAATTTTTTTTTTAATTTTTTGAACTTTATGGTCCTTACACATGATTATGTATTATATTTATATTGACAAGATCTTTACATATGGCAGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCGGCTATGATTGGCCGCAACATGAATGAGTATGCATGCCAATTCCCTTCTTCCATTATACATCTCTTATTTTAATTTGAACGAACGTGTATGTAAAGAAATTTTGAGAGAATTTTCAAAATTCTCTTGCTCATGTTTTTGTTTTGAATCTTTTTGTTGGGGGTGAGGAGATTTTTGTTTTGGAATGTATGTGTGGAACTGTTTGAATTAGTAACTCACACAAGGTTGATGTAATCAGGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAACTTGAGGTAAACACACAAACTTTACAAAAGCTCTATAAAATCTTTTTATAAGTGCACATATATTTGGAATCATGGCGAGTTTGACGAAATTATAACGATGGCACCGTGATTTCGTTCAACCTCAAAGTGCATAGTTTTTCAAAAATTAAACCTAGATCCTTTGAAACCAGTTGTACGGTGCAGTCAATTGTATATATAGTGCATCCGGCTTTAGAGAATCCAATTTGTTACATAATTAGTATTTTCAATGGACACGTTCTAACATGAATTTAGTTGTATATTTCAGGTACAAAAACACCTTCAACTACGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAAAAAGCTTATCAGACACTTGCAGGTGAAAACATGGCATCTGCTACAACTAATAACTTAAAGGGCGTTGTTCTTGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTACATCTTTTCAAGATCTTGACCTTTTCGGAGGCGGTGGTGGTGGTGATCAACTTGACCTTCAGCAAAACATGGACAAGCAAACCCTAGATCATCATGCATATATGCAAATCAATGAGAACTTAAGCCTTGGCAAGAAAAGGCCTAACCCTAACACTAACCCTTATAGTGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCACCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTAGGTGAAAAGAAATTTGATGCATCTATGAATAAACTTGAAAGGCCTTCACCAAGAAGAGGGACATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACCGGTACTATGGCACAAGGTAGAGGCTCACCATTTGGATGA
Protein sequence

>MS.gene038958.t1

MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASATTNNLKGVVLGPHGMAEMGLLKEFGSPLSFTSFQDLDLFGGGGGGDQLDLQQNMDKQTLDHHAYMQINENLSLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILGEKKFDASMNKLERPSPRRGTSLHAERMSPMISTGTMAQGRGSPFG