Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039020.t1 | AFK49673.1 | 92.5 | 267 | 18 | 1 | 1 | 267 | 1 | 265 | 9.80E-116 | 426.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039020.t1 | Q8LCG7 | 83.7 | 123 | 16 | 2 | 94 | 215 | 65 | 184 | 1.5e-51 | 204.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039020.t1 | I3TAY1 | 92.5 | 267 | 18 | 1 | 1 | 267 | 1 | 265 | 7.0e-116 | 426.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene039020.t1 | TF | NF-YC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039020.t1 | MTR_7g113680 | 56.180 | 267 | 93 | 9 | 5 | 262 | 53 | 304 | 9.36e-80 | 243 |
MS.gene039020.t1 | MTR_1g082660 | 60.000 | 235 | 74 | 11 | 5 | 228 | 2 | 227 | 2.51e-74 | 227 |
MS.gene039020.t1 | MTR_3g099180 | 67.361 | 144 | 37 | 3 | 86 | 228 | 36 | 170 | 8.65e-62 | 194 |
MS.gene039020.t1 | MTR_3g099180 | 67.361 | 144 | 37 | 3 | 86 | 228 | 36 | 170 | 9.98e-62 | 194 |
MS.gene039020.t1 | MTR_2g023340 | 55.034 | 149 | 52 | 3 | 87 | 226 | 67 | 209 | 4.63e-52 | 170 |
MS.gene039020.t1 | MTR_2g081600 | 60.241 | 83 | 32 | 1 | 104 | 185 | 21 | 103 | 2.09e-30 | 110 |
MS.gene039020.t1 | MTR_2g081630 | 60.241 | 83 | 32 | 1 | 104 | 185 | 21 | 103 | 2.19e-30 | 110 |
MS.gene039020.t1 | MTR_3g012030 | 41.026 | 78 | 46 | 0 | 106 | 183 | 9 | 86 | 3.77e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039020.t1 | AT1G56170 | 86.154 | 130 | 14 | 2 | 84 | 212 | 55 | 181 | 2.89e-78 | 235 |
MS.gene039020.t1 | AT1G56170 | 86.154 | 130 | 14 | 2 | 84 | 212 | 55 | 181 | 2.89e-78 | 235 |
MS.gene039020.t1 | AT1G08970 | 71.528 | 144 | 38 | 3 | 87 | 228 | 62 | 204 | 7.29e-69 | 213 |
MS.gene039020.t1 | AT1G08970 | 71.528 | 144 | 38 | 3 | 87 | 228 | 62 | 204 | 7.29e-69 | 213 |
MS.gene039020.t1 | AT1G08970 | 71.528 | 144 | 38 | 3 | 87 | 228 | 62 | 204 | 7.29e-69 | 213 |
MS.gene039020.t1 | AT1G08970 | 71.528 | 144 | 38 | 3 | 87 | 228 | 62 | 204 | 7.29e-69 | 213 |
MS.gene039020.t1 | AT5G63470 | 57.635 | 203 | 67 | 5 | 43 | 236 | 20 | 212 | 1.63e-68 | 212 |
MS.gene039020.t1 | AT5G63470 | 57.635 | 203 | 67 | 5 | 43 | 236 | 20 | 212 | 1.63e-68 | 212 |
MS.gene039020.t1 | AT1G54830 | 69.930 | 143 | 39 | 2 | 87 | 228 | 52 | 191 | 4.73e-68 | 210 |
MS.gene039020.t1 | AT1G54830 | 69.930 | 143 | 39 | 2 | 87 | 228 | 52 | 191 | 4.73e-68 | 210 |
MS.gene039020.t1 | AT1G54830 | 69.930 | 143 | 39 | 2 | 87 | 228 | 52 | 191 | 4.73e-68 | 210 |
MS.gene039020.t1 | AT3G48590 | 67.089 | 158 | 47 | 2 | 73 | 228 | 33 | 187 | 2.74e-67 | 209 |
MS.gene039020.t1 | AT5G50480 | 47.879 | 165 | 70 | 4 | 83 | 245 | 35 | 185 | 2.22e-47 | 157 |
MS.gene039020.t1 | AT5G27910 | 41.111 | 180 | 86 | 6 | 81 | 258 | 15 | 176 | 2.46e-39 | 135 |
MS.gene039020.t1 | AT5G50490 | 39.429 | 175 | 93 | 4 | 74 | 246 | 8 | 171 | 9.95e-36 | 126 |
MS.gene039020.t1 | AT5G50470 | 48.148 | 108 | 47 | 2 | 83 | 184 | 44 | 148 | 2.96e-30 | 113 |
MS.gene039020.t1 | AT5G38140 | 45.000 | 100 | 51 | 2 | 84 | 182 | 48 | 144 | 2.39e-26 | 102 |
Find 74 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCAATCCCATGTTGGCTTC+TGG | 0.242345 | 2.2:+24489141 | MS.gene039020:CDS |
TAGAGTTGACTTTGCGATCT+TGG | 0.263614 | 2.2:+24489463 | MS.gene039020:CDS |
TTTGCTCAATTTCTTGCATT+TGG | 0.264134 | 2.2:-24489311 | None:intergenic |
TCTTCTTTCAATTCATCTCT+TGG | 0.282962 | 2.2:-24489585 | None:intergenic |
TACGCGCAAGTGGGAGAGTA+TGG | 0.334677 | 2.2:-24489350 | None:intergenic |
ATCAGCAGCTTCAAATGTTC+TGG | 0.343397 | 2.2:+24489283 | MS.gene039020:CDS |
GAGGCTGCTGGTTAGAATAT+AGG | 0.350073 | 2.2:-24489740 | None:intergenic |
GTTGGTGTTGCTGCTGTTGA+TGG | 0.352589 | 2.2:-24489260 | None:intergenic |
TATAGGGCTGCATGATCAAC+TGG | 0.360730 | 2.2:-24489723 | None:intergenic |
GGTGGAAATGCTGTGCTTGC+TGG | 0.362971 | 2.2:-24489239 | None:intergenic |
TTAACTTGTCATGGATAATT+CGG | 0.369534 | 2.2:+24489032 | None:intergenic |
AAGTGGCTGGAGGCTGTGTT+GGG | 0.387279 | 2.2:-24489188 | None:intergenic |
GTCCCACCACAACATCCTTT+AGG | 0.406073 | 2.2:+24489675 | MS.gene039020:CDS |
AGGCTGCTGGTTAGAATATA+GGG | 0.421798 | 2.2:-24489739 | None:intergenic |
TCAGCTGGAGCACCGATTAT+CGG | 0.426072 | 2.2:-24489636 | None:intergenic |
CAACATCCTTTAGGTCCTAC+AGG | 0.429195 | 2.2:+24489684 | MS.gene039020:CDS |
AAGCCTACTATTCCGATAAT+CGG | 0.435007 | 2.2:+24489624 | MS.gene039020:CDS |
AAAGTGGCTGGAGGCTGTGT+TGG | 0.435441 | 2.2:-24489189 | None:intergenic |
CCAGAAGCCAACATGGGATT+GGG | 0.438408 | 2.2:-24489141 | None:intergenic |
GCCAGAAGCCAACATGGGAT+TGG | 0.445176 | 2.2:-24489142 | None:intergenic |
AGTGAGAAGAATAGACCATT+TGG | 0.446634 | 2.2:-24489107 | None:intergenic |
TGTGGTGGGACATAATAATA+TGG | 0.447642 | 2.2:-24489663 | None:intergenic |
ATTTATTAAGAGTCTGTTTG+CGG | 0.454383 | 2.2:-24489828 | None:intergenic |
GTGCTTGCTGGTATGCGAAT+TGG | 0.457941 | 2.2:-24489227 | None:intergenic |
CCACAGGAGGTCGAGGCTGC+TGG | 0.460527 | 2.2:-24489752 | None:intergenic |
GCTGGAGGCTGTGTTGGGGT+AGG | 0.482836 | 2.2:-24489183 | None:intergenic |
TCAGCAGCTTCAAATGTTCT+GGG | 0.497192 | 2.2:+24489284 | MS.gene039020:CDS |
CTCCTGTGGCTTTCATGCCA+TGG | 0.498225 | 2.2:+24489766 | MS.gene039020:CDS |
CGCACCAGGTACTAGCCAAA+TGG | 0.499512 | 2.2:+24489092 | MS.gene039020:CDS |
GCACCGATTATCGGAATAGT+AGG | 0.501513 | 2.2:-24489627 | None:intergenic |
ATCATCCCTGTAGGACCTAA+AGG | 0.501857 | 2.2:-24489690 | None:intergenic |
GAGCTTCTGCTGAAATCATC+CGG | 0.503953 | 2.2:-24489404 | None:intergenic |
TAATAATATGGCATATCAGC+TGG | 0.509819 | 2.2:-24489651 | None:intergenic |
TCCTCTTGTTCTCTTCTGTG+TGG | 0.511755 | 2.2:-24489488 | None:intergenic |
AGGTCCTACAGGGATGATCA+TGG | 0.513342 | 2.2:+24489695 | MS.gene039020:CDS |
ACATGGGATTGGGAACAGTC+TGG | 0.517231 | 2.2:-24489131 | None:intergenic |
ATGAAAGCCACAGGAGGTCG+AGG | 0.520693 | 2.2:-24489759 | None:intergenic |
AGAGATGAATTGAAAGAAGA+GGG | 0.526767 | 2.2:+24489588 | MS.gene039020:CDS |
GAGTCTGTTTGCGGCTGTTG+TGG | 0.537428 | 2.2:-24489819 | None:intergenic |
TGAAAGCCGATGAAGATGTC+CGG | 0.548255 | 2.2:+24489385 | MS.gene039020:CDS |
GTGGGCGGAATTAGCAAAAG+TGG | 0.552229 | 2.2:-24489205 | None:intergenic |
GAATTGAAAGAAGAGGGGCT+TGG | 0.553111 | 2.2:+24489594 | MS.gene039020:CDS |
CTTGCTGGTATGCGAATTGG+TGG | 0.555433 | 2.2:-24489224 | None:intergenic |
GACCATGGCATGAAAGCCAC+AGG | 0.561895 | 2.2:-24489768 | None:intergenic |
TCTGTTTGCGGCTGTTGTGG+TGG | 0.570337 | 2.2:-24489816 | None:intergenic |
GGTGTTGCTGCTGTTGATGG+TGG | 0.572770 | 2.2:-24489257 | None:intergenic |
AATCATCCGGACATCTTCAT+CGG | 0.573019 | 2.2:-24489391 | None:intergenic |
GCGGAATTAGCAAAAGTGGC+TGG | 0.573546 | 2.2:-24489201 | None:intergenic |
AGGTGTGCCAGAAGCCAACA+TGG | 0.576129 | 2.2:-24489148 | None:intergenic |
AAGAGATGAATTGAAAGAAG+AGG | 0.576346 | 2.2:+24489587 | MS.gene039020:CDS |
GGGGTAGGAACAGCTAGAGC+AGG | 0.581108 | 2.2:-24489168 | None:intergenic |
TAGACCATTTGGCTAGTACC+TGG | 0.582406 | 2.2:-24489096 | None:intergenic |
GACTGTTCCCAATCCCATGT+TGG | 0.582414 | 2.2:+24489134 | MS.gene039020:CDS |
TCTGCGATCGGAGTCGCACC+AGG | 0.583461 | 2.2:+24489078 | MS.gene039020:CDS |
GAAAGAAGAGGGGCTTGGAA+TGG | 0.586004 | 2.2:+24489599 | MS.gene039020:CDS |
GACCTAAAGGATGTTGTGGT+GGG | 0.590318 | 2.2:-24489677 | None:intergenic |
TCCACACAGAAGAGAACAAG+AGG | 0.590738 | 2.2:+24489487 | MS.gene039020:CDS |
CCAGCAGCCTCGACCTCCTG+TGG | 0.590845 | 2.2:+24489752 | MS.gene039020:CDS |
GGTCCTACAGGGATGATCAT+GGG | 0.598225 | 2.2:+24489696 | MS.gene039020:CDS |
TTTCCCATGATCATCCCTGT+AGG | 0.601110 | 2.2:-24489699 | None:intergenic |
ACATTTGAAGCTGCTGATGT+TGG | 0.603398 | 2.2:-24489278 | None:intergenic |
CATCAGCAACAATCTGCGAT+CGG | 0.623433 | 2.2:+24489066 | MS.gene039020:CDS |
GTAGGACCTAAAGGATGTTG+TGG | 0.634993 | 2.2:-24489681 | None:intergenic |
AGTGGCTGGAGGCTGTGTTG+GGG | 0.638626 | 2.2:-24489187 | None:intergenic |
GGACCTAAAGGATGTTGTGG+TGG | 0.645250 | 2.2:-24489678 | None:intergenic |
TTGCTGGTATGCGAATTGGT+GGG | 0.649667 | 2.2:-24489223 | None:intergenic |
CTGGTATGCGAATTGGTGGG+CGG | 0.667066 | 2.2:-24489220 | None:intergenic |
ATAGGGCTGCATGATCAACT+GGG | 0.669210 | 2.2:-24489722 | None:intergenic |
AACATCCTTTAGGTCCTACA+GGG | 0.669689 | 2.2:+24489685 | MS.gene039020:CDS |
TGAATGTGTGCATTTGACCA+TGG | 0.670369 | 2.2:-24489783 | None:intergenic |
GAATTAGCAAAAGTGGCTGG+AGG | 0.677288 | 2.2:-24489198 | None:intergenic |
CATGGCATGAAAGCCACAGG+AGG | 0.683115 | 2.2:-24489765 | None:intergenic |
GAGATGAATTGAAAGAAGAG+GGG | 0.683256 | 2.2:+24489589 | MS.gene039020:CDS |
GGTGTGCCAGAAGCCAACAT+GGG | 0.688166 | 2.2:-24489147 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATGATGTTTTTGATTTCT+TGG | + | chr2.2:24489551-24489570 | MS.gene039020:CDS | 20.0% |
AAGAGATGAATTGAAAGAAG+AGG | + | chr2.2:24489587-24489606 | MS.gene039020:CDS | 30.0% | |
AGAGATGAATTGAAAGAAGA+GGG | + | chr2.2:24489588-24489607 | MS.gene039020:CDS | 30.0% | |
TAATAATATGGCATATCAGC+TGG | - | chr2.2:24489654-24489673 | None:intergenic | 30.0% | |
TCTTCTTTCAATTCATCTCT+TGG | - | chr2.2:24489588-24489607 | None:intergenic | 30.0% | |
TTTGCTCAATTTCTTGCATT+TGG | - | chr2.2:24489314-24489333 | None:intergenic | 30.0% | |
! | TGCTACATCATTCTTTTGTA+GGG | - | chr2.2:24489517-24489536 | None:intergenic | 30.0% |
AAGCCTACTATTCCGATAAT+CGG | + | chr2.2:24489624-24489643 | MS.gene039020:CDS | 35.0% | |
AGTGAGAAGAATAGACCATT+TGG | - | chr2.2:24489110-24489129 | None:intergenic | 35.0% | |
GAGATGAATTGAAAGAAGAG+GGG | + | chr2.2:24489589-24489608 | MS.gene039020:CDS | 35.0% | |
! | ATTTTCTTTATACGCGCAAG+TGG | - | chr2.2:24489363-24489382 | None:intergenic | 35.0% |
! | CTGCTACATCATTCTTTTGT+AGG | - | chr2.2:24489518-24489537 | None:intergenic | 35.0% |
! | TGTGGTGGGACATAATAATA+TGG | - | chr2.2:24489666-24489685 | None:intergenic | 35.0% |
! | TTTTCTTTATACGCGCAAGT+GGG | - | chr2.2:24489362-24489381 | None:intergenic | 35.0% |
AACATCCTTTAGGTCCTACA+GGG | + | chr2.2:24489685-24489704 | MS.gene039020:CDS | 40.0% | |
AATCATCCGGACATCTTCAT+CGG | - | chr2.2:24489394-24489413 | None:intergenic | 40.0% | |
ATCAGCAGCTTCAAATGTTC+TGG | + | chr2.2:24489283-24489302 | MS.gene039020:CDS | 40.0% | |
TCAGCAGCTTCAAATGTTCT+GGG | + | chr2.2:24489284-24489303 | MS.gene039020:CDS | 40.0% | |
TGAATGTGTGCATTTGACCA+TGG | - | chr2.2:24489786-24489805 | None:intergenic | 40.0% | |
! | ACATTTGAAGCTGCTGATGT+TGG | - | chr2.2:24489281-24489300 | None:intergenic | 40.0% |
! | AGGCTGCTGGTTAGAATATA+GGG | - | chr2.2:24489742-24489761 | None:intergenic | 40.0% |
! | CATGCTTTTGCAAATACGAC+TGG | - | chr2.2:24489429-24489448 | None:intergenic | 40.0% |
! | TAGAGTTGACTTTGCGATCT+TGG | + | chr2.2:24489463-24489482 | MS.gene039020:CDS | 40.0% |
ATAGGGCTGCATGATCAACT+GGG | - | chr2.2:24489725-24489744 | None:intergenic | 45.0% | |
ATCATCCCTGTAGGACCTAA+AGG | - | chr2.2:24489693-24489712 | None:intergenic | 45.0% | |
CAACATCCTTTAGGTCCTAC+AGG | + | chr2.2:24489684-24489703 | MS.gene039020:CDS | 45.0% | |
CATCAGCAACAATCTGCGAT+CGG | + | chr2.2:24489066-24489085 | MS.gene039020:CDS | 45.0% | |
GAATTAGCAAAAGTGGCTGG+AGG | - | chr2.2:24489201-24489220 | None:intergenic | 45.0% | |
GAATTGAAAGAAGAGGGGCT+TGG | + | chr2.2:24489594-24489613 | MS.gene039020:CDS | 45.0% | |
GACCTAAAGGATGTTGTGGT+GGG | - | chr2.2:24489680-24489699 | None:intergenic | 45.0% | |
GAGCTTCTGCTGAAATCATC+CGG | - | chr2.2:24489407-24489426 | None:intergenic | 45.0% | |
GTAGGACCTAAAGGATGTTG+TGG | - | chr2.2:24489684-24489703 | None:intergenic | 45.0% | |
TAGACCATTTGGCTAGTACC+TGG | - | chr2.2:24489099-24489118 | None:intergenic | 45.0% | |
TATAGGGCTGCATGATCAAC+TGG | - | chr2.2:24489726-24489745 | None:intergenic | 45.0% | |
TCCACACAGAAGAGAACAAG+AGG | + | chr2.2:24489487-24489506 | MS.gene039020:CDS | 45.0% | |
TCCTCTTGTTCTCTTCTGTG+TGG | - | chr2.2:24489491-24489510 | None:intergenic | 45.0% | |
TGAAAGCCGATGAAGATGTC+CGG | + | chr2.2:24489385-24489404 | MS.gene039020:CDS | 45.0% | |
TTGCTGGTATGCGAATTGGT+GGG | - | chr2.2:24489226-24489245 | None:intergenic | 45.0% | |
TTTCCCATGATCATCCCTGT+AGG | - | chr2.2:24489702-24489721 | None:intergenic | 45.0% | |
! | GAGGCTGCTGGTTAGAATAT+AGG | - | chr2.2:24489743-24489762 | None:intergenic | 45.0% |
!! | GCACCGATTATCGGAATAGT+AGG | - | chr2.2:24489630-24489649 | None:intergenic | 45.0% |
ACATGGGATTGGGAACAGTC+TGG | - | chr2.2:24489134-24489153 | None:intergenic | 50.0% | |
AGGTCCTACAGGGATGATCA+TGG | + | chr2.2:24489695-24489714 | MS.gene039020:CDS | 50.0% | |
CCAGAAGCCAACATGGGATT+GGG | - | chr2.2:24489144-24489163 | None:intergenic | 50.0% | |
CTTGCTGGTATGCGAATTGG+TGG | - | chr2.2:24489227-24489246 | None:intergenic | 50.0% | |
GAAAGAAGAGGGGCTTGGAA+TGG | + | chr2.2:24489599-24489618 | MS.gene039020:CDS | 50.0% | |
GACTGTTCCCAATCCCATGT+TGG | + | chr2.2:24489134-24489153 | MS.gene039020:CDS | 50.0% | |
GCGGAATTAGCAAAAGTGGC+TGG | - | chr2.2:24489204-24489223 | None:intergenic | 50.0% | |
GGACCTAAAGGATGTTGTGG+TGG | - | chr2.2:24489681-24489700 | None:intergenic | 50.0% | |
GGTCCTACAGGGATGATCAT+GGG | + | chr2.2:24489696-24489715 | MS.gene039020:CDS | 50.0% | |
GTCCCACCACAACATCCTTT+AGG | + | chr2.2:24489675-24489694 | MS.gene039020:CDS | 50.0% | |
GTGGGCGGAATTAGCAAAAG+TGG | - | chr2.2:24489208-24489227 | None:intergenic | 50.0% | |
! | GTGCTTGCTGGTATGCGAAT+TGG | - | chr2.2:24489230-24489249 | None:intergenic | 50.0% |
!! | GTTGGTGTTGCTGCTGTTGA+TGG | - | chr2.2:24489263-24489282 | None:intergenic | 50.0% |
!! | TCAGCTGGAGCACCGATTAT+CGG | - | chr2.2:24489639-24489658 | None:intergenic | 50.0% |
AAAGTGGCTGGAGGCTGTGT+TGG | - | chr2.2:24489192-24489211 | None:intergenic | 55.0% | |
AAGTGGCTGGAGGCTGTGTT+GGG | - | chr2.2:24489191-24489210 | None:intergenic | 55.0% | |
AGGTGTGCCAGAAGCCAACA+TGG | - | chr2.2:24489151-24489170 | None:intergenic | 55.0% | |
ATGAAAGCCACAGGAGGTCG+AGG | - | chr2.2:24489762-24489781 | None:intergenic | 55.0% | |
CATGGCATGAAAGCCACAGG+AGG | - | chr2.2:24489768-24489787 | None:intergenic | 55.0% | |
CGCACCAGGTACTAGCCAAA+TGG | + | chr2.2:24489092-24489111 | MS.gene039020:CDS | 55.0% | |
CTCCTGTGGCTTTCATGCCA+TGG | + | chr2.2:24489766-24489785 | MS.gene039020:CDS | 55.0% | |
CTGGTATGCGAATTGGTGGG+CGG | - | chr2.2:24489223-24489242 | None:intergenic | 55.0% | |
GACCATGGCATGAAAGCCAC+AGG | - | chr2.2:24489771-24489790 | None:intergenic | 55.0% | |
GAGTCTGTTTGCGGCTGTTG+TGG | - | chr2.2:24489822-24489841 | None:intergenic | 55.0% | |
GCCAGAAGCCAACATGGGAT+TGG | - | chr2.2:24489145-24489164 | None:intergenic | 55.0% | |
GGTGGAAATGCTGTGCTTGC+TGG | - | chr2.2:24489242-24489261 | None:intergenic | 55.0% | |
GGTGTGCCAGAAGCCAACAT+GGG | - | chr2.2:24489150-24489169 | None:intergenic | 55.0% | |
TACGCGCAAGTGGGAGAGTA+TGG | - | chr2.2:24489353-24489372 | None:intergenic | 55.0% | |
TCTGTTTGCGGCTGTTGTGG+TGG | - | chr2.2:24489819-24489838 | None:intergenic | 55.0% | |
!! | CCCAATCCCATGTTGGCTTC+TGG | + | chr2.2:24489141-24489160 | MS.gene039020:CDS | 55.0% |
!! | GGTGTTGCTGCTGTTGATGG+TGG | - | chr2.2:24489260-24489279 | None:intergenic | 55.0% |
AGTGGCTGGAGGCTGTGTTG+GGG | - | chr2.2:24489190-24489209 | None:intergenic | 60.0% | |
GGGGTAGGAACAGCTAGAGC+AGG | - | chr2.2:24489171-24489190 | None:intergenic | 60.0% | |
GCTGGAGGCTGTGTTGGGGT+AGG | - | chr2.2:24489186-24489205 | None:intergenic | 65.0% | |
TCTGCGATCGGAGTCGCACC+AGG | + | chr2.2:24489078-24489097 | MS.gene039020:CDS | 65.0% | |
CCACAGGAGGTCGAGGCTGC+TGG | - | chr2.2:24489755-24489774 | None:intergenic | 70.0% | |
CCAGCAGCCTCGACCTCCTG+TGG | + | chr2.2:24489752-24489771 | MS.gene039020:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 24489042 | 24489845 | 24489042 | ID=MS.gene039020 |
chr2.2 | mRNA | 24489042 | 24489845 | 24489042 | ID=MS.gene039020.t1;Parent=MS.gene039020 |
chr2.2 | exon | 24489042 | 24489845 | 24489042 | ID=MS.gene039020.t1.exon1;Parent=MS.gene039020.t1 |
chr2.2 | CDS | 24489042 | 24489845 | 24489042 | ID=cds.MS.gene039020.t1;Parent=MS.gene039020.t1 |
Gene Sequence |
Protein sequence |