AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039168.t1 MTR_2g070020 99.231 130 1 0 1 130 987 1116 2.56e-83 264
MS.gene039168.t1 MTR_2g060730 83.077 130 5 2 1 130 1 113 6.64e-69 203
MS.gene039168.t1 MTR_1g047670 60.194 103 39 1 1 101 989 1091 5.89e-37 133
MS.gene039168.t1 MTR_1g079520 50.435 115 55 2 1 113 946 1060 8.45e-30 112
MS.gene039168.t1 MTR_1g097580 42.718 103 56 1 1 100 943 1045 2.93e-23 94.4
MS.gene039168.t1 MTR_1g069470 47.525 101 50 3 1 100 882 980 2.11e-22 91.7
MS.gene039168.t1 MTR_7g098610 42.478 113 63 2 1 112 891 1002 5.18e-21 87.8
MS.gene039168.t1 MTR_4g105370 41.176 102 59 1 1 101 951 1052 2.12e-20 85.9
MS.gene039168.t1 MTR_3g060880 39.394 99 59 1 3 100 957 1055 2.48e-20 85.9
MS.gene039168.t1 MTR_2g090710 48.958 96 45 3 1 96 872 963 4.31e-20 85.1
MS.gene039168.t1 MTR_5g096530 38.835 103 62 1 2 103 829 931 1.53e-19 83.6
MS.gene039168.t1 MTR_4g088320 47.917 96 46 2 1 96 875 966 1.78e-19 83.6
MS.gene039168.t1 MTR_7g059285 39.216 102 57 2 1 101 978 1075 2.18e-19 83.2
MS.gene039168.t1 MTR_5g045910 38.849 139 72 4 1 131 969 1102 2.49e-19 83.2
MS.gene039168.t1 MTR_4g036575 40.594 101 59 1 1 100 899 999 2.73e-19 82.8
MS.gene039168.t1 MTR_3g110840 40.594 101 54 3 2 99 840 937 3.26e-19 82.8
MS.gene039168.t1 MTR_1g080440 43.689 103 52 3 1 100 888 987 3.58e-19 82.4
MS.gene039168.t1 MTR_2g010470 44.444 99 51 2 2 99 870 965 3.67e-19 82.4
MS.gene039168.t1 MTR_4g074080 41.228 114 62 3 4 115 546 656 9.42e-19 81.3
MS.gene039168.t1 MTR_2g014560 43.434 99 52 2 1 99 869 963 1.32e-18 80.9
MS.gene039168.t1 MTR_5g014700 41.414 99 54 2 1 98 870 965 1.35e-17 78.2
MS.gene039168.t1 MTR_3g113140 39.655 116 62 4 2 115 1033 1142 1.90e-17 77.8
MS.gene039168.t1 MTR_6g088790 40.594 101 57 2 1 101 884 981 2.08e-17 77.4
MS.gene039168.t1 MTR_8g107470 45.745 94 47 3 2 93 548 639 2.19e-17 77.4
MS.gene039168.t1 MTR_6g470960 38.636 132 57 5 2 131 551 660 2.47e-17 77.4
MS.gene039168.t1 MTR_2g005810 42.268 97 52 2 1 96 865 958 2.64e-17 77.0
MS.gene039168.t1 MTR_4g097880 41.414 99 54 2 1 98 867 962 3.33e-17 77.0
MS.gene039168.t1 MTR_3g110450 40.000 95 55 1 2 96 892 984 4.10e-17 76.6
MS.gene039168.t1 MTR_4g036695 37.864 103 62 2 1 102 670 771 5.30e-17 76.3
MS.gene039168.t1 MTR_5g021670 36.134 119 70 3 2 119 1015 1128 6.07e-17 76.3
MS.gene039168.t1 MTR_3g449390 40.196 102 56 3 1 100 887 985 7.30e-17 75.9
MS.gene039168.t1 MTR_4g037015 39.583 96 51 1 1 96 777 865 8.43e-17 75.9
MS.gene039168.t1 MTR_4g113100 41.026 117 60 4 2 111 520 634 8.84e-17 75.5
MS.gene039168.t1 MTR_7g028432 39.583 96 51 1 1 96 853 941 9.27e-17 75.5
MS.gene039168.t1 MTR_6g088785 41.000 100 56 2 2 101 885 981 1.60e-16 75.1
MS.gene039168.t1 MTR_5g014720 36.207 116 57 3 1 100 885 999 1.95e-16 74.7
MS.gene039168.t1 MTR_3g110860 40.404 99 55 2 2 99 867 962 2.25e-16 74.7
MS.gene039168.t1 MTR_4g070970 41.346 104 52 3 1 98 828 928 2.26e-16 74.7
MS.gene039168.t1 MTR_6g088755 38.542 96 56 2 2 97 865 957 2.73e-16 74.3
MS.gene039168.t1 MTR_7g091680 41.837 98 54 3 1 96 786 882 3.06e-16 74.3
MS.gene039168.t1 MTR_1g109580 44.330 97 52 2 1 96 606 701 3.18e-16 73.9
MS.gene039168.t1 MTR_3g090480 38.835 103 61 2 1 101 944 1046 3.67e-16 73.9
MS.gene039168.t1 MTR_1g096270 43.000 100 51 2 1 100 828 921 3.77e-16 73.9
MS.gene039168.t1 MTR_3g093710 42.202 109 57 4 2 106 517 623 4.66e-16 73.6
MS.gene039168.t1 MTR_5g011410 41.346 104 53 4 1 101 789 887 4.93e-16 73.6
MS.gene039168.t1 MTR_4g037720 39.583 96 51 1 1 96 848 936 7.23e-16 73.2
MS.gene039168.t1 MTR_8g099195 39.655 116 61 5 2 113 498 608 7.87e-16 72.8
MS.gene039168.t1 MTR_3g062500 39.474 114 63 4 2 113 529 638 1.14e-15 72.4
MS.gene039168.t1 MTR_3g062500 39.474 114 63 4 2 113 539 648 1.14e-15 72.4
MS.gene039168.t1 MTR_7g009940 42.424 99 49 2 3 100 700 791 1.29e-15 72.4
MS.gene039168.t1 MTR_7g103440 37.815 119 57 4 2 107 551 665 1.35e-15 72.4
MS.gene039168.t1 MTR_4g036505 36.082 97 61 1 1 96 873 969 1.46e-15 72.4
MS.gene039168.t1 MTR_6g068970 39.000 100 58 2 2 101 906 1002 1.54e-15 72.0
MS.gene039168.t1 MTR_5g078080 44.444 99 50 4 2 98 513 608 1.92e-15 71.6
MS.gene039168.t1 MTR_5g075630 40.351 114 62 5 2 113 530 639 1.92e-15 71.6
MS.gene039168.t1 MTR_1g052425 43.478 92 50 2 2 92 548 638 2.33e-15 71.6
MS.gene039168.t1 MTR_5g090100 38.835 103 59 3 1 101 861 961 4.35e-15 70.9
MS.gene039168.t1 MTR_3g093930 42.424 99 49 4 1 96 879 972 4.85e-15 70.9
MS.gene039168.t1 MTR_2g073630 41.667 96 51 3 3 96 807 899 4.98e-15 70.9
MS.gene039168.t1 MTR_1g102190 37.000 100 58 3 2 99 225 321 5.03e-15 70.5
MS.gene039168.t1 MTR_3g090665 39.823 113 59 4 2 112 230 335 6.04e-15 70.1
MS.gene039168.t1 MTR_1g096260 43.564 101 43 3 4 100 705 795 7.94e-15 70.1
MS.gene039168.t1 MTR_5g009660 39.655 116 60 5 2 113 475 584 8.65e-15 70.1
MS.gene039168.t1 MTR_2g073540 40.625 96 52 3 3 96 605 697 8.81e-15 70.1
MS.gene039168.t1 MTR_0007s0390 35.821 134 69 7 3 125 560 687 9.21e-15 69.7
MS.gene039168.t1 MTR_7g073710 40.196 102 55 4 2 100 509 607 9.62e-15 69.7
MS.gene039168.t1 MTR_2g073520 40.625 96 52 3 3 96 711 803 1.09e-14 69.7
MS.gene039168.t1 MTR_2g072520 40.206 97 53 2 2 96 202 295 1.26e-14 68.9
MS.gene039168.t1 MTR_3g102400 32.743 113 63 3 1 101 694 805 1.29e-14 69.3
MS.gene039168.t1 MTR_1g110280 40.741 108 51 5 2 100 535 638 1.34e-14 69.3
MS.gene039168.t1 MTR_1g090520 37.624 101 57 2 3 97 988 1088 1.43e-14 69.3
MS.gene039168.t1 MTR_3g090660 41.584 101 55 3 2 100 496 594 1.62e-14 69.3
MS.gene039168.t1 MTR_5g068210 38.614 101 58 2 4 101 490 589 1.89e-14 68.9
MS.gene039168.t1 MTR_3g095100 40.816 98 53 4 1 96 1053 1147 1.91e-14 68.9
MS.gene039168.t1 MTR_0400s0040 35.238 105 53 2 1 97 1058 1155 2.06e-14 68.9
MS.gene039168.t1 MTR_0365s0030 35.238 105 53 2 1 97 1058 1155 2.06e-14 68.9
MS.gene039168.t1 MTR_8g059615 39.583 96 53 3 3 96 822 914 2.13e-14 68.9
MS.gene039168.t1 MTR_7g073290 40.404 99 51 4 1 96 846 939 2.76e-14 68.6
MS.gene039168.t1 MTR_5g034210 43.000 100 50 3 2 96 235 332 2.93e-14 68.2
MS.gene039168.t1 MTR_5g034210 43.000 100 50 3 2 96 322 419 3.17e-14 68.2
MS.gene039168.t1 MTR_2g103950 37.398 123 61 5 2 116 218 332 3.35e-14 68.2
MS.gene039168.t1 MTR_0194s0030 40.625 96 51 3 2 93 507 600 4.53e-14 67.8
MS.gene039168.t1 MTR_1g100787 40.625 96 51 2 4 96 1173 1265 4.62e-14 67.8
MS.gene039168.t1 MTR_5g034210 43.000 100 50 3 2 96 242 339 4.77e-14 67.8
MS.gene039168.t1 MTR_8g057660 42.424 99 51 4 3 101 225 317 5.27e-14 67.4
MS.gene039168.t1 MTR_5g026510 33.065 124 67 4 2 123 481 590 5.91e-14 67.4
MS.gene039168.t1 MTR_4g107620 35.484 124 64 5 2 123 492 601 6.17e-14 67.4
MS.gene039168.t1 MTR_8g035560 37.624 101 53 4 2 96 559 655 7.98e-14 67.0
MS.gene039168.t1 MTR_7g058550 34.615 104 58 3 1 96 685 786 9.02e-14 67.0
MS.gene039168.t1 MTR_4g028090 35.417 96 60 1 1 96 758 851 9.10e-14 67.0
MS.gene039168.t1 MTR_7g092430 41.237 97 52 2 2 96 773 866 9.76e-14 67.0
MS.gene039168.t1 MTR_7g070200 41.489 94 49 2 4 92 622 714 1.05e-13 67.0
MS.gene039168.t1 MTR_7g007540 37.634 93 50 2 1 92 1 86 1.06e-13 63.5
MS.gene039168.t1 MTR_1g061590 36.134 119 59 4 2 107 538 652 1.21e-13 66.6
MS.gene039168.t1 MTR_7g058530 36.275 102 55 3 3 96 688 787 1.45e-13 66.6
MS.gene039168.t1 MTR_1g040545 34.000 100 51 2 1 92 907 999 1.45e-13 66.6
MS.gene039168.t1 MTR_5g085700 33.333 114 60 3 2 111 921 1022 2.36e-13 65.9
MS.gene039168.t1 MTR_8g059605 37.500 96 55 3 3 96 644 736 3.03e-13 65.5
MS.gene039168.t1 MTR_7g481630 36.000 100 53 2 1 96 80 172 3.05e-13 63.5
MS.gene039168.t1 MTR_7g020850 39.394 99 54 3 2 96 254 350 3.31e-13 65.1
MS.gene039168.t1 MTR_1g038890 38.776 98 46 3 1 92 1033 1122 3.57e-13 65.5
MS.gene039168.t1 MTR_8g059605 37.500 96 55 3 3 96 839 931 3.79e-13 65.5
MS.gene039168.t1 MTR_5g055470 38.298 94 54 3 2 93 510 601 3.83e-13 65.1
MS.gene039168.t1 MTR_1g102360 38.182 110 50 3 3 96 421 528 4.52e-13 65.1
MS.gene039168.t1 MTR_5g031870 35.115 131 75 4 3 127 311 437 4.78e-13 64.7
MS.gene039168.t1 MTR_7g020850 39.394 99 54 3 2 96 311 407 5.03e-13 64.7
MS.gene039168.t1 MTR_5g031870 35.115 131 75 4 3 127 316 442 5.18e-13 64.7
MS.gene039168.t1 MTR_1g040615 33.000 100 52 2 1 92 2024 2116 5.32e-13 65.1
MS.gene039168.t1 MTR_1g040615 33.333 99 51 3 1 91 1025 1116 4.18e-11 59.7
MS.gene039168.t1 MTR_1g039240 34.286 105 54 3 1 97 1058 1155 5.58e-13 64.7
MS.gene039168.t1 MTR_8g445960 32.990 97 53 2 1 92 63 152 5.68e-13 62.4
MS.gene039168.t1 MTR_8g044940 32.990 97 53 2 1 92 63 152 5.68e-13 62.4
MS.gene039168.t1 MTR_4g130920 36.364 99 56 3 4 98 750 845 5.78e-13 64.7
MS.gene039168.t1 MTR_1g039080 37.755 98 47 3 1 92 192 281 5.98e-13 64.3
MS.gene039168.t1 MTR_2g105680 36.000 100 61 2 4 100 973 1072 6.06e-13 64.7
MS.gene039168.t1 MTR_7g022160 38.144 97 56 2 1 96 909 1002 6.33e-13 64.7
MS.gene039168.t1 MTR_1g040525 33.000 100 52 2 1 92 767 859 7.02e-13 64.7
MS.gene039168.t1 MTR_2g016400 38.462 91 49 2 8 98 120 203 7.23e-13 63.2
MS.gene039168.t1 MTR_3g084510 36.735 98 59 2 2 97 766 862 7.56e-13 64.3
MS.gene039168.t1 MTR_7g081780 38.000 100 51 2 1 96 947 1039 7.71e-13 64.3
MS.gene039168.t1 MTR_5g094380 42.391 92 44 4 3 93 443 526 9.04e-13 64.3
MS.gene039168.t1 MTR_7g045510 41.053 95 43 3 2 92 1091 1176 9.90e-13 64.3
MS.gene039168.t1 MTR_3g075440 42.574 101 48 4 1 96 528 623 1.03e-12 63.9
MS.gene039168.t1 MTR_7g022050 40.404 99 51 4 1 96 534 627 1.06e-12 63.9
MS.gene039168.t1 MTR_1g028890 39.655 116 64 4 2 114 461 573 1.07e-12 63.9
MS.gene039168.t1 MTR_7g096980 39.785 93 50 3 1 92 1108 1195 1.23e-12 63.9
MS.gene039168.t1 MTR_7g081480 38.462 104 45 4 1 96 949 1041 1.28e-12 63.9
MS.gene039168.t1 MTR_7g481590 36.000 100 53 2 1 96 203 295 1.36e-12 63.2
MS.gene039168.t1 MTR_4g130210 36.458 96 55 3 4 96 406 498 1.38e-12 63.5
MS.gene039168.t1 MTR_2g073560 39.583 96 53 3 3 96 817 909 1.41e-12 63.5
MS.gene039168.t1 MTR_8g064690 40.541 111 57 4 2 106 487 594 1.44e-12 63.5
MS.gene039168.t1 MTR_7g039330 41.053 95 43 3 2 92 1189 1274 1.48e-12 63.5
MS.gene039168.t1 MTR_7g062770 36.275 102 50 2 2 96 522 615 1.52e-12 63.5
MS.gene039168.t1 MTR_2g073600 39.583 96 53 3 3 96 841 933 1.57e-12 63.5
MS.gene039168.t1 MTR_8g023720 39.583 96 53 3 3 96 988 1080 1.69e-12 63.5
MS.gene039168.t1 MTR_1g039310 36.842 95 48 2 3 92 1051 1138 1.70e-12 63.5
MS.gene039168.t1 MTR_4g105070 39.583 96 53 3 4 97 534 626 1.75e-12 63.5
MS.gene039168.t1 MTR_7g081570 36.000 100 53 2 1 96 939 1031 2.39e-12 63.2
MS.gene039168.t1 MTR_4g128990 35.000 100 60 3 3 102 443 537 2.52e-12 62.8
MS.gene039168.t1 MTR_4g128990 35.000 100 60 3 3 102 444 538 2.57e-12 62.8
MS.gene039168.t1 MTR_2g090410 34.737 95 59 2 2 96 1228 1319 2.71e-12 62.8
MS.gene039168.t1 MTR_3g062590 36.220 127 68 4 2 128 804 917 2.83e-12 62.8
MS.gene039168.t1 MTR_3g087060 37.374 99 55 4 2 96 454 549 2.96e-12 62.8
MS.gene039168.t1 MTR_4g115120 38.144 97 56 2 2 96 296 390 3.16e-12 62.4
MS.gene039168.t1 MTR_7g062750 39.604 101 48 4 2 96 520 613 3.24e-12 62.8
MS.gene039168.t1 MTR_7g081410 36.000 100 53 2 1 96 946 1038 3.26e-12 62.8
MS.gene039168.t1 MTR_7g018890 35.849 106 61 3 2 102 571 674 3.35e-12 62.4
MS.gene039168.t1 MTR_8g461250 42.105 95 45 2 3 97 211 295 3.43e-12 62.0
MS.gene039168.t1 MTR_4g130210 36.458 96 55 3 4 96 472 564 3.56e-12 62.4
MS.gene039168.t1 MTR_3g087060 37.374 99 55 4 2 96 465 560 3.57e-12 62.4
MS.gene039168.t1 MTR_4g129010 35.354 99 55 4 2 96 220 313 3.66e-12 62.4
MS.gene039168.t1 MTR_7g062920 35.294 102 51 2 2 96 518 611 3.67e-12 62.4
MS.gene039168.t1 MTR_7g451040 36.735 98 57 3 4 98 331 426 4.00e-12 62.4
MS.gene039168.t1 MTR_7g451040 38.947 95 56 2 2 96 725 817 4.63e-11 59.3
MS.gene039168.t1 MTR_7g062950 34.314 102 52 2 2 96 518 611 4.34e-12 62.4
MS.gene039168.t1 MTR_4g014350 37.624 101 54 2 4 96 619 718 4.64e-12 62.0
MS.gene039168.t1 MTR_3g009400 37.755 98 57 3 1 96 1083 1178 4.85e-12 62.0
MS.gene039168.t1 MTR_1g086870 37.097 124 73 3 6 126 471 592 5.03e-12 62.0
MS.gene039168.t1 MTR_1g052275 35.294 102 51 2 2 96 520 613 5.34e-12 62.0
MS.gene039168.t1 MTR_7g062660 35.417 96 59 2 2 96 511 604 5.35e-12 62.0
MS.gene039168.t1 MTR_5g017080 36.082 97 55 3 3 96 346 438 5.73e-12 62.0
MS.gene039168.t1 MTR_7g058860 31.373 102 60 2 3 96 690 789 5.91e-12 62.0
MS.gene039168.t1 MTR_8g028695 37.500 96 55 3 3 96 323 415 6.19e-12 61.6
MS.gene039168.t1 MTR_4g124990 34.737 95 58 2 2 93 526 619 6.53e-12 61.6
MS.gene039168.t1 MTR_7g081410 36.000 100 53 2 1 96 826 918 6.75e-12 61.6
MS.gene039168.t1 MTR_3g086120 40.000 100 55 4 2 99 785 881 7.49e-12 61.6
MS.gene039168.t1 MTR_4g085810 33.000 100 62 2 2 101 504 598 8.97e-12 61.2
MS.gene039168.t1 MTR_2g023150 40.659 91 49 3 6 96 161 246 1.03e-11 60.5
MS.gene039168.t1 MTR_7g062700 34.314 102 52 2 2 96 520 613 1.11e-11 61.2
MS.gene039168.t1 MTR_7g009970 38.462 91 48 2 1 90 669 752 1.13e-11 61.2
MS.gene039168.t1 MTR_7g109670 39.785 93 52 2 6 96 565 655 1.26e-11 60.8
MS.gene039168.t1 MTR_2g090250 29.508 122 82 3 2 123 523 640 1.45e-11 60.8
MS.gene039168.t1 MTR_3g078250 39.583 96 52 4 4 99 541 630 1.59e-11 60.5
MS.gene039168.t1 MTR_7g010000 31.496 127 73 4 1 125 746 860 1.60e-11 60.5
MS.gene039168.t1 MTR_3g067650 34.694 98 60 3 2 96 365 461 1.62e-11 60.5
MS.gene039168.t1 MTR_7g062940 33.333 102 53 2 2 96 517 610 1.63e-11 60.5
MS.gene039168.t1 MTR_5g083480 34.211 114 73 2 2 115 674 785 1.68e-11 60.5
MS.gene039168.t1 MTR_7g074610 36.458 96 57 2 3 96 275 368 1.76e-11 60.5
MS.gene039168.t1 MTR_5g091950 36.458 96 56 3 3 96 722 814 1.80e-11 60.5
MS.gene039168.t1 MTR_5g091950 36.458 96 56 3 3 96 767 859 1.84e-11 60.5
MS.gene039168.t1 MTR_3g011630 32.061 131 85 3 2 131 225 352 1.87e-11 60.1
MS.gene039168.t1 MTR_5g083480 34.211 114 73 2 2 115 671 782 2.00e-11 60.5
MS.gene039168.t1 MTR_5g091950 36.458 96 56 3 3 96 857 949 2.11e-11 60.5
MS.gene039168.t1 MTR_0205s0040 36.000 100 61 2 2 101 1031 1127 2.25e-11 60.1
MS.gene039168.t1 MTR_8g021350 35.789 95 56 3 2 93 572 664 2.27e-11 60.1
MS.gene039168.t1 MTR_6g016495 36.458 96 55 3 4 96 481 573 2.50e-11 60.1
MS.gene039168.t1 MTR_1g039220 32.381 105 56 2 1 97 1032 1129 2.52e-11 60.1
MS.gene039168.t1 MTR_8g058250 38.542 96 54 3 3 96 747 839 2.93e-11 60.1
MS.gene039168.t1 MTR_8g445800 38.776 98 54 3 2 97 679 772 2.99e-11 59.7
MS.gene039168.t1 MTR_6g069030 36.082 97 55 3 2 93 507 601 3.09e-11 59.7
MS.gene039168.t1 MTR_3g088855 37.113 97 55 3 3 96 487 580 3.17e-11 59.7
MS.gene039168.t1 MTR_7g007630 32.031 128 71 5 1 125 666 780 3.27e-11 59.7
MS.gene039168.t1 MTR_8g058250 38.542 96 54 3 3 96 843 935 3.28e-11 59.7
MS.gene039168.t1 MTR_3g031470 30.702 114 65 4 1 102 699 810 3.28e-11 59.7
MS.gene039168.t1 MTR_8g445800 38.776 98 54 3 2 97 877 970 3.29e-11 59.7
MS.gene039168.t1 MTR_7g062900 34.314 102 52 2 2 96 476 569 3.32e-11 59.7
MS.gene039168.t1 MTR_7g058830 32.353 102 59 2 3 96 691 790 3.34e-11 59.7
MS.gene039168.t1 MTR_8g445800 38.776 98 54 3 2 97 732 825 3.35e-11 59.7
MS.gene039168.t1 MTR_2g008400 36.538 104 55 5 2 96 474 575 3.70e-11 59.7
MS.gene039168.t1 MTR_7g407130 35.484 93 52 2 1 92 696 781 3.73e-11 59.7
MS.gene039168.t1 MTR_7g045710 40.449 89 43 3 2 89 972 1051 3.85e-11 59.7
MS.gene039168.t1 MTR_2g008390 35.354 99 57 3 2 96 473 568 4.02e-11 59.3
MS.gene039168.t1 MTR_7g062890 32.353 102 54 2 2 96 516 609 4.50e-11 59.3
MS.gene039168.t1 MTR_0049s0070 34.375 96 57 3 4 96 415 507 4.67e-11 59.3
MS.gene039168.t1 MTR_7g099220 39.362 94 51 3 6 96 515 605 4.69e-11 59.3
MS.gene039168.t1 MTR_0049s0070 34.375 96 57 3 4 96 478 570 4.97e-11 59.3
MS.gene039168.t1 MTR_8g016120 38.144 97 55 3 2 96 582 675 6.05e-11 58.9
MS.gene039168.t1 MTR_8g083240 29.565 115 78 2 2 114 750 863 6.35e-11 58.9
MS.gene039168.t1 MTR_8g106100 32.653 98 61 3 2 96 758 853 7.49e-11 58.5
MS.gene039168.t1 MTR_8g028880 31.852 135 77 6 2 131 316 440 8.90e-11 58.5
MS.gene039168.t1 MTR_3g031480 30.556 108 62 3 1 97 694 799 8.97e-11 58.5
MS.gene039168.t1 MTR_5g033820 32.292 96 59 3 4 96 483 575 8.98e-11 58.5
MS.gene039168.t1 MTR_4g123480 35.417 96 58 2 3 96 92 185 9.16e-11 57.4
MS.gene039168.t1 MTR_5g091380 39.216 102 56 4 3 102 362 459 9.68e-11 58.2
MS.gene039168.t1 MTR_4g105540 39.216 102 45 4 2 96 504 595 9.89e-11 58.2
MS.gene039168.t1 MTR_6g088510 36.735 98 57 3 2 96 274 369 9.90e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039168.t1 AT1G17230 69.355 124 38 0 1 124 977 1100 1.47e-50 172
MS.gene039168.t1 AT1G17230 70.492 122 36 0 1 122 977 1098 1.61e-50 172
MS.gene039168.t1 AT5G63930 57.576 99 42 0 1 99 919 1017 4.35e-34 125
MS.gene039168.t1 AT5G63930 57.576 99 42 0 1 99 983 1081 4.50e-34 125
MS.gene039168.t1 AT2G33170 59.804 102 40 1 1 101 1003 1104 1.18e-33 124
MS.gene039168.t1 AT2G33170 59.804 102 40 1 1 101 1003 1104 1.18e-33 124
MS.gene039168.t1 AT4G28650 45.968 124 63 3 1 122 881 1002 1.57e-24 97.8
MS.gene039168.t1 AT1G08590 45.545 101 54 1 1 100 904 1004 3.28e-23 94.0
MS.gene039168.t1 AT1G34110 41.584 101 58 1 1 100 953 1053 8.62e-22 90.1
MS.gene039168.t1 AT1G34110 41.584 101 58 1 1 100 953 1053 9.05e-22 90.1
MS.gene039168.t1 AT5G61480 42.574 101 57 1 1 100 901 1001 1.06e-20 87.0
MS.gene039168.t1 AT1G09970 43.434 99 52 2 2 99 859 954 1.90e-20 86.3
MS.gene039168.t1 AT1G09970 43.434 99 52 2 2 99 860 955 1.94e-20 86.3
MS.gene039168.t1 AT4G26540 41.584 101 58 1 2 101 943 1043 5.91e-20 84.7
MS.gene039168.t1 AT5G25930 45.263 95 49 2 2 96 873 964 9.18e-20 84.3
MS.gene039168.t1 AT3G24240 43.137 102 53 3 1 101 971 1068 1.52e-19 83.6
MS.gene039168.t1 AT5G56040 38.235 102 62 1 2 102 942 1043 1.57e-19 83.6
MS.gene039168.t1 AT5G49660 45.455 99 50 2 2 99 841 936 1.77e-19 83.6
MS.gene039168.t1 AT5G65700 41.414 99 54 2 1 98 872 967 2.78e-18 80.1
MS.gene039168.t1 AT5G65700 41.414 99 54 2 1 98 872 967 2.78e-18 80.1
MS.gene039168.t1 AT5G48940 42.268 97 50 2 1 96 972 1063 3.28e-18 79.7
MS.gene039168.t1 AT4G28490 43.636 110 57 3 1 109 873 978 4.56e-18 79.3
MS.gene039168.t1 AT1G12460 42.857 98 50 3 1 96 641 734 1.29e-17 78.2
MS.gene039168.t1 AT1G12460 41.748 103 54 3 1 101 780 878 1.49e-17 77.8
MS.gene039168.t1 AT1G28440 46.392 97 46 3 1 96 868 959 2.03e-17 77.4
MS.gene039168.t1 AT5G16590 41.441 111 58 3 2 110 515 620 2.15e-17 77.4
MS.gene039168.t1 AT3G49670 41.414 99 54 2 1 98 868 963 2.74e-17 77.0
MS.gene039168.t1 AT2G26730 46.465 99 49 3 2 98 522 618 4.48e-17 76.6
MS.gene039168.t1 AT4G36180 40.870 115 62 3 2 115 1020 1129 8.35e-17 75.9
MS.gene039168.t1 AT1G62950 41.237 97 53 2 1 96 788 881 1.04e-16 75.5
MS.gene039168.t1 AT1G10850 40.708 113 52 3 4 109 536 640 1.22e-16 75.5
MS.gene039168.t1 AT1G78530 40.909 110 58 3 2 109 249 353 1.62e-16 74.3
MS.gene039168.t1 AT1G75820 40.385 104 53 2 1 98 869 969 2.42e-16 74.3
MS.gene039168.t1 AT5G41680 40.404 99 55 3 2 98 230 326 2.57e-16 73.9
MS.gene039168.t1 AT5G41680 40.404 99 55 3 2 98 256 352 3.22e-16 73.6
MS.gene039168.t1 AT2G01210 44.211 95 47 3 1 92 613 704 3.49e-16 73.9
MS.gene039168.t1 AT4G20270 40.952 105 53 5 1 101 889 988 5.16e-16 73.6
MS.gene039168.t1 AT2G41820 37.255 102 63 1 1 101 787 888 7.98e-16 73.2
MS.gene039168.t1 AT2G45590 40.000 105 53 4 3 101 558 658 8.64e-16 72.8
MS.gene039168.t1 AT3G02880 39.450 109 62 3 2 108 517 623 8.80e-16 72.8
MS.gene039168.t1 AT1G15530 41.237 97 54 3 4 99 539 633 1.22e-15 72.4
MS.gene039168.t1 AT3G28040 42.708 96 53 1 1 96 908 1001 1.46e-15 72.4
MS.gene039168.t1 AT5G05160 41.121 107 50 4 2 100 516 617 1.72e-15 72.0
MS.gene039168.t1 AT5G58300 42.574 101 54 3 2 100 532 630 2.47e-15 71.6
MS.gene039168.t1 AT5G58300 42.574 101 54 3 2 100 532 630 2.47e-15 71.6
MS.gene039168.t1 AT5G58300 42.574 101 54 3 2 100 532 630 2.47e-15 71.6
MS.gene039168.t1 AT5G65710 38.793 116 47 4 2 96 874 986 2.81e-15 71.6
MS.gene039168.t1 AT1G60630 40.351 114 53 4 4 110 529 634 3.37e-15 71.2
MS.gene039168.t1 AT5G45800 42.553 94 45 3 8 100 577 662 3.87e-15 70.9
MS.gene039168.t1 AT1G72180 43.750 112 57 5 1 109 863 971 4.18e-15 70.9
MS.gene039168.t1 AT4G25390 39.000 100 50 4 3 96 530 624 5.52e-15 70.5
MS.gene039168.t1 AT3G19700 38.655 119 65 4 2 118 869 981 5.93e-15 70.5
MS.gene039168.t1 AT5G62710 39.175 97 53 3 2 96 456 548 6.03e-15 70.5
MS.gene039168.t1 AT3G08680 39.604 101 58 2 2 100 516 615 6.43e-15 70.5
MS.gene039168.t1 AT3G08680 39.604 101 58 2 2 100 516 615 6.43e-15 70.5
MS.gene039168.t1 AT5G62710 39.175 97 53 3 2 96 490 582 7.52e-15 70.1
MS.gene039168.t1 AT4G02420 39.394 99 52 3 2 96 527 621 8.32e-15 70.1
MS.gene039168.t1 AT1G48480 39.806 103 59 2 2 102 544 645 9.59e-15 69.7
MS.gene039168.t1 AT3G17840 40.000 105 56 4 2 101 538 640 9.67e-15 69.7
MS.gene039168.t1 AT2G31880 41.837 98 51 2 2 96 542 636 1.10e-14 69.7
MS.gene039168.t1 AT5G57670 35.354 99 59 3 3 101 446 539 1.64e-14 69.3
MS.gene039168.t1 AT1G68400 41.346 104 53 5 2 100 537 637 1.86e-14 68.9
MS.gene039168.t1 AT3G56370 40.404 99 51 4 1 96 855 948 2.21e-14 68.9
MS.gene039168.t1 AT1G64210 41.748 103 53 3 4 100 481 582 2.59e-14 68.6
MS.gene039168.t1 AT2G24230 38.095 105 59 3 4 105 752 853 2.86e-14 68.6
MS.gene039168.t1 AT5G37790 36.634 101 54 4 2 96 397 493 4.59e-14 67.8
MS.gene039168.t1 AT5G51770 39.623 106 48 4 3 99 528 626 4.65e-14 67.8
MS.gene039168.t1 AT1G25320 36.082 97 61 1 1 96 600 696 7.69e-14 67.4
MS.gene039168.t1 AT5G13290 35.238 105 62 3 2 102 274 376 7.72e-14 67.0
MS.gene039168.t1 AT1G66460 36.735 98 58 3 2 96 342 438 7.74e-14 67.4
MS.gene039168.t1 AT5G13290 35.238 105 62 3 2 102 299 401 7.77e-14 67.0
MS.gene039168.t1 AT4G08850 44.086 93 44 2 1 92 955 1040 8.29e-14 67.4
MS.gene039168.t1 AT1G66460 36.735 98 58 3 2 96 315 411 1.00e-13 67.0
MS.gene039168.t1 AT3G51740 40.206 97 56 2 4 100 715 809 1.07e-13 67.0
MS.gene039168.t1 AT1G35710 38.043 92 50 1 1 92 1031 1115 2.56e-13 65.9
MS.gene039168.t1 AT3G57830 40.217 92 53 2 2 92 562 652 2.59e-13 65.9
MS.gene039168.t1 AT3G57830 40.217 92 53 2 2 92 562 652 2.59e-13 65.9
MS.gene039168.t1 AT1G34420 37.500 96 57 1 1 96 871 963 2.87e-13 65.9
MS.gene039168.t1 AT1G23540 44.118 102 46 5 2 96 547 644 3.17e-13 65.5
MS.gene039168.t1 AT3G50230 38.542 96 41 3 4 96 575 655 3.27e-13 65.5
MS.gene039168.t1 AT1G70460 43.137 102 47 5 2 96 529 626 3.32e-13 65.5
MS.gene039168.t1 AT2G02220 41.837 98 52 3 3 98 913 1007 3.40e-13 65.5
MS.gene039168.t1 AT2G36570 38.211 123 55 5 2 107 533 651 3.57e-13 65.5
MS.gene039168.t1 AT3G50230 38.542 96 41 3 4 96 563 643 3.77e-13 65.5
MS.gene039168.t1 AT1G74360 37.624 101 51 4 2 97 993 1086 4.20e-13 65.1
MS.gene039168.t1 AT2G35620 33.871 124 66 4 2 123 479 588 6.20e-13 64.7
MS.gene039168.t1 AT2G35620 33.871 124 66 4 2 123 479 588 6.20e-13 64.7
MS.gene039168.t1 AT2G35620 33.871 124 66 4 2 123 479 588 6.20e-13 64.7
MS.gene039168.t1 AT2G35620 33.871 124 66 4 2 123 479 588 6.20e-13 64.7
MS.gene039168.t1 AT1G56120 38.095 126 69 6 2 123 720 840 7.36e-13 64.7
MS.gene039168.t1 AT3G55550 37.113 97 56 3 2 96 524 617 7.39e-13 64.3
MS.gene039168.t1 AT1G55610 36.735 98 58 3 1 96 1039 1134 8.96e-13 64.3
MS.gene039168.t1 AT1G55610 36.735 98 58 3 1 96 1039 1134 8.96e-13 64.3
MS.gene039168.t1 AT1G56120 38.095 126 69 6 2 123 886 1006 9.06e-13 64.3
MS.gene039168.t1 AT1G56120 38.095 126 69 6 2 123 868 988 9.88e-13 64.3
MS.gene039168.t1 AT1G53420 42.424 99 48 5 2 96 802 895 1.02e-12 64.3
MS.gene039168.t1 AT4G39400 38.776 98 55 4 1 96 1061 1155 1.03e-12 64.3
MS.gene039168.t1 AT1G07650 40.625 96 52 3 3 96 645 737 1.13e-12 63.9
MS.gene039168.t1 AT1G31420 35.484 124 64 5 2 123 482 591 1.21e-12 63.9
MS.gene039168.t1 AT1G31420 35.484 124 64 5 2 123 482 591 1.21e-12 63.9
MS.gene039168.t1 AT1G31420 33.871 124 66 4 2 123 481 590 1.22e-12 63.9
MS.gene039168.t1 AT4G28350 33.333 99 63 2 2 100 528 623 1.23e-12 63.9
MS.gene039168.t1 AT1G70450 39.604 101 52 4 2 96 226 323 1.31e-12 63.5
MS.gene039168.t1 AT1G07650 40.625 96 52 3 3 96 832 924 1.32e-12 63.9
MS.gene039168.t1 AT1G07650 40.625 96 52 3 3 96 858 950 1.37e-12 63.9
MS.gene039168.t1 AT1G07650 40.625 96 52 3 3 96 864 956 1.40e-12 63.9
MS.gene039168.t1 AT5G59260 36.893 103 50 4 1 96 530 624 1.52e-12 63.5
MS.gene039168.t1 AT3G13380 37.755 98 57 3 1 96 1037 1132 1.68e-12 63.5
MS.gene039168.t1 AT1G75640 34.483 116 70 3 2 112 1019 1133 1.90e-12 63.5
MS.gene039168.t1 AT5G38560 38.384 99 56 3 2 96 517 614 1.98e-12 63.2
MS.gene039168.t1 AT5G60320 35.772 123 53 6 1 112 522 629 2.10e-12 63.2
MS.gene039168.t1 AT5G67200 35.185 108 55 3 4 110 574 667 2.49e-12 63.2
MS.gene039168.t1 AT1G29720 38.384 99 52 4 2 96 849 942 2.52e-12 63.2
MS.gene039168.t1 AT1G68690 40.625 96 52 3 2 93 552 646 4.07e-12 62.4
MS.gene039168.t1 AT1G68690 40.625 96 52 3 2 93 552 646 4.07e-12 62.4
MS.gene039168.t1 AT1G68690 40.625 96 52 3 2 93 552 646 4.07e-12 62.4
MS.gene039168.t1 AT3G45440 31.387 137 75 4 8 128 576 709 5.62e-12 62.0
MS.gene039168.t1 AT1G10620 40.351 114 56 6 2 108 546 654 5.73e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G28250 45.161 93 45 4 8 96 402 492 5.77e-12 62.0
MS.gene039168.t1 AT2G05940 38.462 104 56 3 3 102 271 370 5.91e-12 62.0
MS.gene039168.t1 AT1G72300 34.906 106 64 3 3 106 982 1084 6.81e-12 61.6
MS.gene039168.t1 AT3G15890 31.624 117 74 4 2 115 218 331 7.88e-12 61.2
MS.gene039168.t1 AT3G45440 31.387 137 75 4 8 128 523 656 8.12e-12 61.6
MS.gene039168.t1 AT3G45440 31.387 137 75 4 8 128 523 656 8.12e-12 61.6
MS.gene039168.t1 AT3G45440 31.387 137 75 4 8 128 523 656 8.12e-12 61.6
MS.gene039168.t1 AT5G07280 36.735 98 56 3 2 96 1095 1189 8.23e-12 61.6
MS.gene039168.t1 AT5G44700 37.500 104 57 4 1 98 1133 1234 8.66e-12 61.6
MS.gene039168.t1 AT5G06940 41.000 100 51 4 2 96 764 860 8.77e-12 61.6
MS.gene039168.t1 AT5G01890 37.374 99 54 4 1 96 863 956 9.02e-12 61.2
MS.gene039168.t1 AT5G49770 31.818 132 81 4 2 130 811 936 9.36e-12 61.2
MS.gene039168.t1 AT1G68690 42.105 95 50 3 2 92 552 645 9.56e-12 61.2
MS.gene039168.t1 AT3G24540 40.000 100 53 3 2 96 359 456 9.66e-12 61.2
MS.gene039168.t1 AT1G66830 38.710 93 51 3 2 93 588 675 9.89e-12 61.2
MS.gene039168.t1 AT5G49760 34.234 111 66 3 2 109 808 914 1.05e-11 61.2
MS.gene039168.t1 AT3G53810 36.735 98 57 3 2 96 524 619 1.15e-11 61.2
MS.gene039168.t1 AT5G46330 31.858 113 63 3 2 104 1053 1161 1.22e-11 61.2
MS.gene039168.t1 AT5G46330 31.858 113 63 3 2 104 1053 1161 1.22e-11 61.2
MS.gene039168.t1 AT2G29250 32.432 111 64 4 2 110 516 617 1.24e-11 60.8
MS.gene039168.t1 AT1G26150 39.175 97 52 3 2 93 606 700 1.46e-11 60.8
MS.gene039168.t1 AT4G02010 40.860 93 51 2 6 96 565 655 1.57e-11 60.8
MS.gene039168.t1 AT1G67510 37.374 99 51 2 4 92 615 712 1.79e-11 60.5
MS.gene039168.t1 AT4G23740 38.384 99 53 4 2 96 511 605 1.87e-11 60.5
MS.gene039168.t1 AT4G23740 38.384 99 53 4 2 96 511 605 1.87e-11 60.5
MS.gene039168.t1 AT4G01330 31.429 140 77 5 3 126 341 477 2.45e-11 60.1
MS.gene039168.t1 AT5G49780 26.923 130 82 3 2 128 711 830 2.64e-11 60.1
MS.gene039168.t1 AT5G54590 33.333 93 57 2 4 96 289 376 2.86e-11 59.7
MS.gene039168.t1 AT5G54590 33.333 93 57 2 4 96 289 376 2.86e-11 59.7
MS.gene039168.t1 AT5G54590 33.333 93 57 2 4 96 289 376 2.86e-11 59.7
MS.gene039168.t1 AT5G49780 26.923 130 82 3 2 128 810 929 2.96e-11 60.1
MS.gene039168.t1 AT5G49780 26.923 130 82 3 2 128 832 951 3.02e-11 60.1
MS.gene039168.t1 AT5G65240 35.354 99 57 4 2 96 463 558 3.25e-11 59.7
MS.gene039168.t1 AT4G01330 31.206 141 77 5 3 126 341 478 3.37e-11 59.7
MS.gene039168.t1 AT1G66150 33.628 113 69 4 2 110 769 879 3.59e-11 59.7
MS.gene039168.t1 AT5G65240 35.354 99 57 4 2 96 463 558 3.66e-11 59.7
MS.gene039168.t1 AT5G10290 35.354 99 57 4 2 96 469 564 3.71e-11 59.7
MS.gene039168.t1 AT5G10290 35.354 99 57 4 2 96 469 564 3.71e-11 59.7
MS.gene039168.t1 AT4G33430 35.354 99 57 3 2 96 468 563 4.68e-11 59.3
MS.gene039168.t1 AT1G53430 41.667 96 51 3 3 96 807 899 5.06e-11 59.3
MS.gene039168.t1 AT1G53430 41.667 96 51 3 3 96 848 940 5.70e-11 59.3
MS.gene039168.t1 AT4G33430 35.354 99 57 3 2 96 515 610 5.90e-11 58.9
MS.gene039168.t1 AT1G17750 35.088 114 65 4 4 109 974 1086 6.18e-11 58.9
MS.gene039168.t1 AT1G53440 41.667 96 51 3 3 96 846 938 6.21e-11 58.9
MS.gene039168.t1 AT3G14840 35.052 97 58 3 2 96 850 943 6.77e-11 58.9
MS.gene039168.t1 AT5G03140 34.615 104 56 4 2 97 549 648 7.35e-11 58.9
MS.gene039168.t1 AT5G24100 40.426 94 52 3 4 96 518 608 7.36e-11 58.9
MS.gene039168.t1 AT1G73080 36.190 105 53 3 8 101 1011 1112 7.44e-11 58.9
MS.gene039168.t1 AT2G13800 38.000 100 53 4 2 96 337 432 9.13e-11 58.5
MS.gene039168.t1 AT2G13800 38.000 100 53 4 2 96 337 432 9.13e-11 58.5
MS.gene039168.t1 AT2G13800 38.000 100 53 4 2 96 454 549 9.44e-11 58.5
MS.gene039168.t1 AT2G13800 38.000 100 53 4 2 96 454 549 9.44e-11 58.5
MS.gene039168.t1 AT2G13790 38.000 100 53 4 2 96 473 568 9.67e-11 58.5
MS.gene039168.t1 AT1G49730 32.075 106 68 2 2 106 536 638 9.71e-11 58.5

Find 21 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGTGACATCTATAGTTT+TGG 0.249876 2.1:-28463615 MS.gene039168:CDS
CATTCAGATGTAGGAGAGTT+TGG 0.337261 2.1:+28463312 None:intergenic
CAAGTTCATCTCCACTTAAT+AGG 0.341851 2.1:-28463395 MS.gene039168:CDS
GCAATGACCTCTCTCATTGT+AGG 0.392083 2.1:+28463372 None:intergenic
TCAAGTGGACATTCAGATGT+AGG 0.474900 2.1:+28463303 None:intergenic
ATGTAGGAGAGTTTGGTGAT+TGG 0.486037 2.1:+28463319 None:intergenic
CCTTGCTCCAATGGTTGCAC+TGG 0.513009 2.1:+28463558 None:intergenic
AAATCACCACCTTGCTCCAA+TGG 0.513354 2.1:+28463549 None:intergenic
TTGTCAAATAATTCAGATGT+AGG 0.514337 2.1:+28463489 None:intergenic
TGCAATGTTGATTGATGCTA+GGG 0.514808 2.1:-28463352 MS.gene039168:CDS
CTCATTGTAGGCCTATTAAG+TGG 0.533622 2.1:+28463384 None:intergenic
GTGATTTAGTGAGCTGGGTG+AGG 0.538786 2.1:-28463533 MS.gene039168:CDS
TTGCAATGTTGATTGATGCT+AGG 0.544448 2.1:-28463353 MS.gene039168:CDS
TATAAAAGCTCTTCTTCCAA+AGG 0.546356 2.1:-28463276 MS.gene039168:intron
AAGGTGGTGATTTAGTGAGC+TGG 0.548290 2.1:-28463539 MS.gene039168:CDS
TAGGTCACCAGTGCAACCAT+TGG 0.564892 2.1:-28463565 MS.gene039168:CDS
AGGTGGTGATTTAGTGAGCT+GGG 0.610738 2.1:-28463538 MS.gene039168:CDS
TGCTGGAACTAGTAACTGGT+AGG 0.630847 2.1:-28463584 MS.gene039168:CDS
CCAGTGCAACCATTGGAGCA+AGG 0.635357 2.1:-28463558 MS.gene039168:CDS
TAATAGGCCTACAATGAGAG+AGG 0.656864 2.1:-28463379 MS.gene039168:CDS
GTGCAACCATTGGAGCAAGG+TGG 0.722058 2.1:-28463555 MS.gene039168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTGATAACTAATATAA+AGG - chr2.1:28463191-28463210 MS.gene039168:intron 10.0%
!!! TTGAAAAAAGTTTTATATTT+CGG - chr2.1:28463099-28463118 MS.gene039168:intron 10.0%
!!! CTAAAAGATATTTAGAATTA+GGG - chr2.1:28463158-28463177 MS.gene039168:intron 15.0%
!!! TCTAAAAGATATTTAGAATT+AGG - chr2.1:28463157-28463176 MS.gene039168:intron 15.0%
!! AAAGCAGTACTAAATTAATA+AGG - chr2.1:28463049-28463068 MS.gene039168:intron 20.0%
!! ACTTGATAAAAAAATGTATG+AGG + chr2.1:28463531-28463550 None:intergenic 20.0%
!! TTTCATCTATGAATTTCAAT+AGG + chr2.1:28463559-28463578 None:intergenic 20.0%
!!! AAAAAGTTTTATATTTCGGA+CGG - chr2.1:28463103-28463122 MS.gene039168:intron 20.0%
!!! AATATCCATGAAATTTTTAG+GGG + chr2.1:28463488-28463507 None:intergenic 20.0%
!!! ACAATATCCATGAAATTTTT+AGG + chr2.1:28463490-28463509 None:intergenic 20.0%
!!! CAATATCCATGAAATTTTTA+GGG + chr2.1:28463489-28463508 None:intergenic 20.0%
! AACTACTAGTACTATTCTTA+AGG + chr2.1:28462964-28462983 None:intergenic 25.0%
! AATTTCATGGATATTGTACA+TGG - chr2.1:28463493-28463512 MS.gene039168:CDS 25.0%
! ACTACTAGTACTATTCTTAA+GGG + chr2.1:28462963-28462982 None:intergenic 25.0%
! TCTAACGAATGATATTTGAT+CGG + chr2.1:28463294-28463313 None:intergenic 25.0%
! TGTCTTGAAAAATGAAAAGT+CGG + chr2.1:28463030-28463049 None:intergenic 25.0%
! TTAATCTAACGATTGATAAG+TGG - chr2.1:28463314-28463333 MS.gene039168:CDS 25.0%
! TTGTCAAATAATTCAGATGT+AGG + chr2.1:28462674-28462693 None:intergenic 25.0%
!! AAATGTGACATCTATAGTTT+TGG - chr2.1:28462545-28462564 MS.gene039168:intron 25.0%
!! AATGTGACATCTATAGTTTT+GGG - chr2.1:28462546-28462565 MS.gene039168:intron 25.0%
!! CATGCATTTATGTGAAATTT+TGG + chr2.1:28463416-28463435 None:intergenic 25.0%
!!! ATATCCATGAAATTTTTAGG+GGG + chr2.1:28463487-28463506 None:intergenic 25.0%
TATAAAAGCTCTTCTTCCAA+AGG - chr2.1:28462884-28462903 MS.gene039168:intron 30.0%
! GAGCTTTTATATTCTTCAAG+TGG + chr2.1:28462875-28462894 None:intergenic 30.0%
!! ATGTGACATCTATAGTTTTG+GGG - chr2.1:28462547-28462566 MS.gene039168:intron 30.0%
AACGAATGATATTTGATCGG+AGG + chr2.1:28463291-28463310 None:intergenic 35.0%
ACGAATGATATTTGATCGGA+GGG + chr2.1:28463290-28463309 None:intergenic 35.0%
CAAGTTCATCTCCACTTAAT+AGG - chr2.1:28462765-28462784 MS.gene039168:intron 35.0%
GAAAAATGAAAAGTCGGTGT+TGG + chr2.1:28463024-28463043 None:intergenic 35.0%
TGATAAGTGGTTGAAGAGAT+AGG - chr2.1:28463327-28463346 MS.gene039168:CDS 35.0%
TTAGGGGGCAACTAATATAT+AGG + chr2.1:28463472-28463491 None:intergenic 35.0%
TTCATGGATATTGTACATGG+TGG - chr2.1:28463496-28463515 MS.gene039168:CDS 35.0%
! TGCAATGTTGATTGATGCTA+GGG - chr2.1:28462808-28462827 MS.gene039168:intron 35.0%
! TTGCAATGTTGATTGATGCT+AGG - chr2.1:28462807-28462826 MS.gene039168:intron 35.0%
AAGTGGTTGAAGAGATAGGA+GGG - chr2.1:28463331-28463350 MS.gene039168:CDS 40.0%
CACTTGAGCAATCTAACCTT+TGG + chr2.1:28462903-28462922 None:intergenic 40.0%
CATTCAGATGTAGGAGAGTT+TGG + chr2.1:28462851-28462870 None:intergenic 40.0%
CTCATTGTAGGCCTATTAAG+TGG + chr2.1:28462779-28462798 None:intergenic 40.0%
GTTGCCCCCTAAAAATTTCA+TGG - chr2.1:28463480-28463499 MS.gene039168:CDS 40.0%
TAAGTGGTTGAAGAGATAGG+AGG - chr2.1:28463330-28463349 MS.gene039168:CDS 40.0%
TAATAGGCCTACAATGAGAG+AGG - chr2.1:28462781-28462800 MS.gene039168:intron 40.0%
TCAAGTGGACATTCAGATGT+AGG + chr2.1:28462860-28462879 None:intergenic 40.0%
! ATGTAGGAGAGTTTGGTGAT+TGG + chr2.1:28462844-28462863 None:intergenic 40.0%
! GTTTTGCTGGAACTAGTAAC+TGG - chr2.1:28462572-28462591 MS.gene039168:intron 40.0%
!!! TAGTTTTGGGGTAGTTTTGC+TGG - chr2.1:28462559-28462578 MS.gene039168:intron 40.0%
AAATCACCACCTTGCTCCAA+TGG + chr2.1:28462614-28462633 None:intergenic 45.0%
AAGGTGGTGATTTAGTGAGC+TGG - chr2.1:28462621-28462640 MS.gene039168:intron 45.0%
AGGTGGTGATTTAGTGAGCT+GGG - chr2.1:28462622-28462641 MS.gene039168:intron 45.0%
ATTTGATCGGAGGGAAGCTA+AGG + chr2.1:28463281-28463300 None:intergenic 45.0%
GCAATGACCTCTCTCATTGT+AGG + chr2.1:28462791-28462810 None:intergenic 45.0%
TGCTGGAACTAGTAACTGGT+AGG - chr2.1:28462576-28462595 MS.gene039168:intron 45.0%
GTGATTTAGTGAGCTGGGTG+AGG - chr2.1:28462627-28462646 MS.gene039168:intron 50.0%
TAGGTCACCAGTGCAACCAT+TGG - chr2.1:28462595-28462614 MS.gene039168:intron 50.0%
CCAGTGCAACCATTGGAGCA+AGG - chr2.1:28462602-28462621 MS.gene039168:intron 55.0%
CCTTGCTCCAATGGTTGCAC+TGG + chr2.1:28462605-28462624 None:intergenic 55.0%
CGGAGGGAAGCTAAGGCTAA+AGG + chr2.1:28463274-28463293 None:intergenic 55.0%
GTGCAACCATTGGAGCAAGG+TGG - chr2.1:28462605-28462624 MS.gene039168:intron 55.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 28462530 28463652 28462530 ID=MS.gene039168
chr2.1 mRNA 28462530 28463652 28462530 ID=MS.gene039168.t1;Parent=MS.gene039168
chr2.1 exon 28463277 28463652 28463277 ID=MS.gene039168.t1.exon1;Parent=MS.gene039168.t1
chr2.1 CDS 28463277 28463652 28463277 ID=cds.MS.gene039168.t1;Parent=MS.gene039168.t1
chr2.1 exon 28462530 28462549 28462530 ID=MS.gene039168.t1.exon2;Parent=MS.gene039168.t1
chr2.1 CDS 28462530 28462549 28462530 ID=cds.MS.gene039168.t1;Parent=MS.gene039168.t1
Gene Sequence

>MS.gene039168

ATGAAGGTGACTGAAAAATGTGACATCTATAGTTTTGGGGTAGTTTTGCTGGAACTAGTAACTGGTAGGTCACCAGTGCAACCATTGGAGCAAGGTGGTGATTTAGTGAGCTGGGTGAGGAGATCAATTCAAGCATCAATACCTACATCTGAATTATTTGACAAGAGATTGAATTTGAGTGAACAAAAAACTGTTGAAGAAATGTCTCTTATTCTAAAAATTGCACTGTTTTGCACAAGTTCATCTCCACTTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAACCAATCACCAAACTCTCCTACATCTGAATGTCCACTTGAAGAATATAAAAGCTCTTCTTCCAAAGGTTAGATTGCTCAAGTGTTCAATGAATGATAATCATTTTTATTACTAGCTCTGTCCCTTAAGAATAGTACTAGTAGTTAATACATTTAATGTGTCTATTTTGTACGTAGATATGTCCAACACCGACTTTTCATTTTTCAAGACAAAGCAGTACTAAATTAATAAGGATCATGTTTTAAAATATATATAGTAATTTGAAAAAAGTTTTATATTTCGGACGGTGTTTATTTTCTTTCTAAAAGATATTTAGAATCTAAAAGATATTTAGAATTAGGGAAAATTGTATTATTTTGATAACTAATATAAAGGAGTAGATACTCTAGTATGAGATGTTCACTTGACAAGAGTAAGCAAAATTTTTGTCTGCCTTTAGCCTTAGCTTCCCTCCGATCAAATATCATTCGTTAGATTAATCTAACGATTGATAAGTGGTTGAAGAGATAGGAGGGAGTGCATACATTGTATTTGAAGATAGAGAGACATTACATTCTCACAAGATCATATTGTACCAAAATTTCACATAAATGCATGAAAAAATCACATAAGAGAATCAATTATTTTCTTCCTATATATTAGTTGCCCCCTAAAAATTTCATGGATATTGTACATGGTGGAACAATTCACCTCATACATTTTTTTATCAAGTAATGACCTATTGAAATTCATAGATGAAATTTTTATTAATATATATAGAAAACATATTGATCTGTCTTATTTTGTGCATGCAGATGATAGTCTTGAGCAGTGA
Protein sequence

>MS.gene039168.t1

MKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVSWVRRSIQASIPTSELFDKRLNLSEQKTVEEMSLILKIALFCTSSSPLNRPTMREVIAMLIDAREYVNQSPNSPTSECPLEEYKSSSSKDDSLEQ