AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039590.t1 MTR_0558s0020 94.595 296 16 0 37 332 1 296 0.0 591
MS.gene039590.t1 MTR_1g083640 90.559 286 12 1 37 307 1 286 0.0 538
MS.gene039590.t1 MTR_8g446020 81.081 296 16 2 37 332 1 256 2.69e-164 479
MS.gene039590.t1 MTR_6g090505 91.139 237 21 0 102 338 1 237 2.90e-152 453
MS.gene039590.t1 MTR_6g090505 64.865 111 12 2 397 505 221 306 2.95e-35 138
MS.gene039590.t1 MTR_2g014100 88.571 245 20 1 37 273 1 245 1.69e-151 446
MS.gene039590.t1 MTR_3g008240 91.626 203 17 0 37 239 1 203 1.74e-129 387
MS.gene039590.t1 MTR_0337s0040 75.096 261 26 1 37 297 1 222 2.27e-129 388
MS.gene039590.t1 MTR_4g040430 91.626 203 12 2 37 239 1 198 1.38e-126 380
MS.gene039590.t1 MTR_5g071590 85.556 180 14 1 37 204 1 180 1.85e-104 322
MS.gene039590.t1 MTR_0337s0060 63.258 264 65 5 435 698 4 235 2.33e-96 302
MS.gene039590.t1 MTR_0019s0290 88.816 152 17 0 119 270 9 160 1.03e-91 287
MS.gene039590.t1 MTR_1g055240 93.706 143 9 0 127 269 2 144 3.85e-91 285
MS.gene039590.t1 MTR_1281s0010 94.495 109 6 0 56 164 1 109 5.21e-67 219
MS.gene039590.t1 MTR_4g008820 91.398 93 8 0 24 116 112 204 8.31e-47 179
MS.gene039590.t1 MTR_3g028680 60.563 142 51 2 561 698 1 141 1.65e-43 156
MS.gene039590.t1 MTR_2g067090 68.033 122 35 1 576 693 110 231 1.66e-43 160
MS.gene039590.t1 MTR_8g046060 85.227 88 5 2 37 116 91 178 7.15e-37 138
MS.gene039590.t1 MTR_6g051425 31.250 288 173 5 77 359 22 289 4.14e-36 140
MS.gene039590.t1 MTR_7g094840 39.419 241 74 7 737 907 108 346 1.72e-31 127
MS.gene039590.t1 MTR_7g094840 39.419 241 74 7 737 907 104 342 1.90e-31 126
MS.gene039590.t1 MTR_4g133495 62.617 107 16 2 599 705 174 256 2.10e-28 116
MS.gene039590.t1 MTR_4g133340 62.617 107 16 2 599 705 174 256 2.10e-28 116
MS.gene039590.t1 MTR_7g094840 38.863 211 87 8 737 907 108 316 8.37e-22 97.8
MS.gene039590.t1 MTR_1g070355 27.888 251 162 4 78 328 80 311 1.92e-19 93.6
MS.gene039590.t1 MTR_2g067130 76.000 50 9 1 644 693 55 101 3.12e-14 71.6
MS.gene039590.t1 MTR_0337s0050 83.333 36 6 0 296 331 14 49 5.44e-14 68.2
MS.gene039590.t1 MTR_0402s0040 25.405 185 119 4 86 270 40 205 2.97e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039590.t1 AT4G38180 25.996 477 285 13 71 509 72 518 3.26e-44 172
MS.gene039590.t1 AT3G22170 23.227 564 354 15 6 533 6 526 7.13e-31 131
MS.gene039590.t1 AT3G22170 23.227 564 354 15 6 533 6 526 7.13e-31 131
MS.gene039590.t1 AT3G06250 23.431 478 269 10 60 508 178 587 8.56e-29 124
MS.gene039590.t1 AT3G06250 23.431 478 269 10 60 508 178 587 8.56e-29 124
MS.gene039590.t1 AT3G06250 23.431 478 269 10 60 508 178 587 8.56e-29 124
MS.gene039590.t1 AT4G15090 24.008 479 305 11 87 533 66 517 7.48e-28 121
MS.gene039590.t1 AT4G15090 24.008 479 305 11 87 533 66 517 7.48e-28 121
MS.gene039590.t1 AT4G15090 24.008 479 305 11 87 533 66 517 7.48e-28 121
MS.gene039590.t1 AT4G15090 24.008 479 305 11 87 533 66 517 7.48e-28 121
MS.gene039590.t1 AT4G15090 24.008 479 305 11 87 533 66 517 7.48e-28 121
MS.gene039590.t1 AT1G76320 23.491 464 286 12 76 506 1 428 1.13e-27 120
MS.gene039590.t1 AT1G76320 23.491 464 286 12 76 506 1 428 1.35e-27 120
MS.gene039590.t1 AT1G76320 23.491 464 286 12 76 506 1 428 1.35e-27 120
MS.gene039590.t1 AT1G76320 23.491 464 286 12 76 506 1 428 1.70e-27 120
MS.gene039590.t1 AT4G38170 25.685 292 178 7 272 533 24 306 2.25e-27 118
MS.gene039590.t1 AT1G10240 22.535 497 323 15 86 546 62 532 1.54e-24 110
MS.gene039590.t1 AT1G10240 22.535 497 323 15 86 546 62 532 1.54e-24 110
MS.gene039590.t1 AT5G28530 23.235 439 270 10 77 472 60 474 4.04e-24 108
MS.gene039590.t1 AT5G28530 23.235 439 270 10 77 472 60 474 4.75e-24 108
MS.gene039590.t1 AT5G28530 23.235 439 270 10 77 472 60 474 4.75e-24 108
MS.gene039590.t1 AT2G27110 22.030 463 299 11 250 659 181 634 4.05e-23 106
MS.gene039590.t1 AT2G27110 22.030 463 299 11 250 659 181 634 4.05e-23 106
MS.gene039590.t1 AT5G18960 22.567 483 274 13 58 508 197 611 5.72e-23 105
MS.gene039590.t1 AT5G18960 22.567 483 274 13 58 508 197 611 5.72e-23 105
MS.gene039590.t1 AT2G27110 22.030 463 299 11 250 659 36 489 6.92e-23 105
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 8.62e-21 98.6
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 8.66e-21 99.0
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 8.66e-21 99.0
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 8.66e-21 99.0
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 9.42e-21 98.6
MS.gene039590.t1 AT2G32250 22.289 498 284 13 40 505 8 434 9.42e-21 98.6
MS.gene039590.t1 AT2G32250 22.440 459 257 11 78 505 3 393 2.21e-20 97.4
MS.gene039590.t1 AT2G32250 22.440 459 257 11 78 505 3 393 2.55e-20 97.1
MS.gene039590.t1 AT1G52520 21.707 539 338 17 78 571 91 590 4.22e-20 96.3
MS.gene039590.t1 AT1G80010 23.602 483 263 17 78 503 101 534 7.07e-20 95.5
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 27 426 1.05e-18 92.0
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 41 440 1.05e-18 92.0
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 27 426 1.19e-18 91.7
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 27 426 1.19e-18 91.7
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 27 426 1.68e-18 91.3
MS.gene039590.t1 AT4G19990 21.749 446 273 11 78 493 27 426 1.68e-18 91.3
MS.gene039590.t1 AT4G19990 25.000 268 167 5 256 493 106 369 3.00e-18 90.5

Find 145 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTATGAGTTAACTAATT+TGG 0.154279 3.1:+9060225 MS.gene039590:CDS
CTCGACGGTGTTCTTGAATC+TGG 0.173656 3.1:+9061198 MS.gene039590:CDS
CTTTAGTCATTTCAACATTA+TGG 0.194287 3.1:+9060492 MS.gene039590:CDS
TACATTTCAGCTGCCTTTAT+TGG 0.203801 3.1:+9059944 MS.gene039590:intron
TGGTTATGGAAGTTTGTTTC+CGG 0.277304 3.1:+9063164 MS.gene039590:intron
TTGAAAACAAAACCTTCTTC+TGG 0.280906 3.1:-9066078 None:intergenic
GCATAAGATTTCCGTAAGTT+TGG 0.288708 3.1:-9060348 None:intergenic
TGGTGATGGAAGTTTGTTTC+CGG 0.289260 3.1:+9063217 MS.gene039590:CDS
TCTGATGTTGGCCTGTTGTT+AGG 0.302249 3.1:-9058762 None:intergenic
CGATCATGATCTTCAAAACT+TGG 0.305714 3.1:-9060838 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 3.1:+9060266 MS.gene039590:CDS
ACAAAATAAGAAATCAAATA+AGG 0.334199 3.1:+9058680 MS.gene039590:CDS
TGTTCTTGAATCTGGGAAAA+AGG 0.337718 3.1:+9061206 MS.gene039590:CDS
GTTTGAGCATATGTTAGATT+TGG 0.345286 3.1:-9065752 None:intergenic
ATGATTGTCAAAACCAATAA+AGG 0.364908 3.1:-9059957 None:intergenic
TATGAGAGTTTGTTTCTGTT+TGG 0.371359 3.1:+9063241 MS.gene039590:CDS
TGCTGCCTTGACTGATTTAG+TGG 0.372642 3.1:+9066494 MS.gene039590:CDS
GAAGGCCTACTTCAGACTTT+AGG 0.375686 3.1:+9060317 MS.gene039590:CDS
TATGCATTGGTCTTCAGCTT+GGG 0.376102 3.1:+9060366 MS.gene039590:CDS
TTCCATGATTCTTTATTACT+AGG 0.389886 3.1:-9058552 None:intergenic
GAGAACGTCTTATGAAGTTA+TGG 0.394356 3.1:+9059028 MS.gene039590:CDS
TCGAACACATAACAGATTGA+TGG 0.398781 3.1:+9065992 MS.gene039590:intron
TTCCTTCAAATACTATTATG+AGG 0.399583 3.1:+9060666 MS.gene039590:CDS
TGCTGCTAATGCAGTTCCTC+AGG 0.399925 3.1:+9065565 MS.gene039590:CDS
TCATGCTGAGTTGGACTTCA+AGG 0.402098 3.1:+9060534 MS.gene039590:CDS
TGAAAACAAAACCTTCTTCT+GGG 0.410682 3.1:-9066077 None:intergenic
TTATGCATTGGTCTTCAGCT+TGG 0.417102 3.1:+9060365 MS.gene039590:CDS
GATCTTCAAAACTTGGGAAA+AGG 0.421455 3.1:-9060831 None:intergenic
CACCGACGGCACTCAGTTAT+CGG 0.422054 3.1:+9066038 MS.gene039590:CDS
GAAGAGTTGCTTCTTTCTAA+AGG 0.422174 3.1:+9061231 MS.gene039590:CDS
ATGTCTATAAGATATATAGA+TGG 0.423693 3.1:+9058883 MS.gene039590:CDS
AGGTGGCTTGTCCAAACTTA+CGG 0.423981 3.1:+9060337 MS.gene039590:CDS
GAAGTTATGGGTCAAGGAGT+TGG 0.428685 3.1:+9059041 MS.gene039590:CDS
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 3.1:+9058966 MS.gene039590:CDS
TCCATGATTCTTTATTACTA+GGG 0.436638 3.1:-9058551 None:intergenic
GTCGATACTGATTGTTCGTT+CGG 0.438290 3.1:-9059319 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 3.1:+9058831 MS.gene039590:CDS
TCGACGGTGTTCTTGAATCT+GGG 0.449309 3.1:+9061199 MS.gene039590:CDS
AACCGCATCAGTTGACTGTT+GGG 0.451336 3.1:-9060586 None:intergenic
CAGAAACAAACTCTCATAAC+CGG 0.451877 3.1:-9063236 None:intergenic
AACAATCAGTATCGACCATT+AGG 0.463413 3.1:+9059326 MS.gene039590:CDS
GTACTTTGATTCCCAGAAGA+AGG 0.463557 3.1:+9066066 MS.gene039590:CDS
AGAACGTCTTATGAAGTTAT+GGG 0.466325 3.1:+9059029 MS.gene039590:CDS
GTCTGCTTAATCCTAACAAC+AGG 0.466827 3.1:+9058751 MS.gene039590:CDS
ATCATCACTATCACTACTAC+AGG 0.470790 3.1:-9065687 None:intergenic
TCTAATGACGATTCGTCAAA+AGG 0.472809 3.1:+9059109 MS.gene039590:CDS
CTTGCTTTGCATTTATTCAC+AGG 0.480587 3.1:+9060632 MS.gene039590:CDS
TTTAAGTCTGAAAACCGAAA+AGG 0.483010 3.1:-9059080 None:intergenic
CTCCTCATAATAGTATTTGA+AGG 0.485089 3.1:-9060668 None:intergenic
TTACTTCTCGAAATGATCTC+AGG 0.488412 3.1:-9058953 None:intergenic
TCATGTGGCAATACTTGCAC+TGG 0.489784 3.1:-9065779 None:intergenic
TATGAGGAGGACACAACAAA+AGG 0.490908 3.1:+9060682 MS.gene039590:CDS
ATCAGATTTCGACTACAATT+GGG 0.491708 3.1:+9060267 MS.gene039590:CDS
GTCTTCAGTGCCAACATTGA+TGG 0.493704 3.1:-9061082 None:intergenic
ACATTATGGTTCAGAGAATG+AGG 0.494022 3.1:+9060506 MS.gene039590:CDS
CTCAGGTAACACAAATGCTC+TGG 0.496027 3.1:-9058936 None:intergenic
GCCACGTCTGGAAATTTAAG+TGG 0.496739 3.1:+9065809 MS.gene039590:CDS
ATGCAGTTCCTCAGGGGAGA+TGG 0.497595 3.1:+9065573 MS.gene039590:CDS
CCCCTAGTAATAAAGAATCA+TGG 0.497629 3.1:+9058550 MS.gene039590:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 3.1:-9059214 None:intergenic
ATCACATCGGAGCGCGAGCA+AGG 0.504097 3.1:-9058081 None:intergenic
TTACAACCAACCCTTTCCTC+AGG 0.505082 3.1:-9058825 None:intergenic
AACACAGCTGAAGCCGCTGC+CGG 0.506763 3.1:+9066561 MS.gene039590:CDS
CGTTATGTTTGTAACAAACA+AGG 0.507173 3.1:+9058714 MS.gene039590:CDS
TAACAGATTGATGGAAATGT+TGG 0.507736 3.1:+9066001 MS.gene039590:intron
GAGGGATAATCATGCTGAGT+TGG 0.508852 3.1:+9060525 MS.gene039590:CDS
TTAGATGGCGTCATGTAAGA+TGG 0.510015 3.1:-9061267 None:intergenic
TAACAAACAAGGTTTCAAGA+AGG 0.511682 3.1:+9058725 MS.gene039590:CDS
ACTACAGGGGATATATTCAA+TGG 0.511968 3.1:-9065672 None:intergenic
TAGTGATAGTGATGATGAAG+AGG 0.512768 3.1:+9065694 MS.gene039590:CDS
GATGATGAGATTGAAGATTC+CGG 0.514120 3.1:+9063194 MS.gene039590:CDS
AAATGCTCTGGTTTATGTAA+TGG 0.514358 3.1:-9058924 None:intergenic
GCTATCGATGAACCATCTGC+TGG 0.519259 3.1:+9061306 MS.gene039590:CDS
TAAAGAATCGAACAAGTGAA+TGG 0.519618 3.1:-9060474 None:intergenic
GAACCGCATCAGTTGACTGT+TGG 0.521951 3.1:-9060587 None:intergenic
TCATGATCGACTTGATGAAA+GGG 0.522852 3.1:+9060852 MS.gene039590:CDS
CTTACGGAAATCTTATGCAT+TGG 0.523146 3.1:+9060353 MS.gene039590:CDS
GGTAATTATGCATATAACAC+TGG 0.523547 3.1:+9058618 MS.gene039590:CDS
TGTCTATAAGATATATAGAT+GGG 0.523615 3.1:+9058884 MS.gene039590:CDS
ATACTGATTGTTCGTTCGGT+AGG 0.528574 3.1:-9059315 None:intergenic
CATAATAGTATTTGAAGGAA+AGG 0.529686 3.1:-9060663 None:intergenic
GGAGATGGACACATAATTTG+AGG 0.530753 3.1:+9065588 MS.gene039590:CDS
ATCATGATCGACTTGATGAA+AGG 0.531340 3.1:+9060851 MS.gene039590:CDS
TGATTTAGTGGAGAAAATGA+AGG 0.531515 3.1:+9066506 MS.gene039590:CDS
TTCACAAACTCAATAACCAC+TGG 0.531770 3.1:-9058789 None:intergenic
ATTGAAGATTCCGGTGGTGA+TGG 0.532127 3.1:+9063203 MS.gene039590:CDS
TCAATACACAAACTCGAACC+AGG 0.533979 3.1:+9065643 MS.gene039590:CDS
GGCCTACTTCAGACTTTAGG+TGG 0.536366 3.1:+9060320 MS.gene039590:CDS
AAATGCAGTACGAATGTCGC+TGG 0.539104 3.1:-9058108 None:intergenic
TGGGCTTTGCTCATGGCACA+TGG 0.540761 3.1:+9060156 MS.gene039590:CDS
AATCGAACAAGTGAATGGTC+TGG 0.540971 3.1:-9060469 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 3.1:+9060683 MS.gene039590:CDS
TATATTCAATGGATTTGCCC+TGG 0.549438 3.1:-9065661 None:intergenic
TGTGTATTGAATGCAGTTTG+TGG 0.554142 3.1:-9065630 None:intergenic
AACAAACAAGGTTTCAAGAA+GGG 0.554561 3.1:+9058726 MS.gene039590:CDS
CGTCAAAAGGAGATGGTGGT+TGG 0.556443 3.1:+9059122 MS.gene039590:CDS
CTATCGATGAACCATCTGCT+GGG 0.558325 3.1:+9061307 MS.gene039590:CDS
GTGGACTTCACCCCAGCAGA+TGG 0.559002 3.1:-9061318 None:intergenic
GATAACTGAGTGCCGTCGGT+GGG 0.564363 3.1:-9066036 None:intergenic
TAAGATATATAGATGGGATG+TGG 0.567659 3.1:+9058890 MS.gene039590:CDS
TGAAATTCGTGCAACCTCGC+CGG 0.571032 3.1:-9058057 None:intergenic
GTTATGGGTCAAGGAGTTGG+AGG 0.578191 3.1:+9059044 MS.gene039590:CDS
GATCATGATCTTCAAAACTT+GGG 0.579469 3.1:-9060837 None:intergenic
GCTGCTAATGCAGTTCCTCA+GGG 0.579909 3.1:+9065566 MS.gene039590:CDS
TCCACTTAAATTTCCAGACG+TGG 0.579967 3.1:-9065810 None:intergenic
CCATGATTCTTTATTACTAG+GGG 0.580036 3.1:-9058550 None:intergenic
TCTTATGAAGTTATGGGTCA+AGG 0.580120 3.1:+9059035 MS.gene039590:CDS
CTGAAATCGACCATCAATGT+TGG 0.583839 3.1:+9061072 MS.gene039590:CDS
GACGATTCGTCAAAAGGAGA+TGG 0.586508 3.1:+9059115 MS.gene039590:CDS
ACCACTGGACTGTCTGATGT+TGG 0.589854 3.1:-9058774 None:intergenic
TGAATAAATGCAAAGCAAGC+TGG 0.591761 3.1:-9060628 None:intergenic
TAGATGGCGTCATGTAAGAT+GGG 0.592967 3.1:-9061266 None:intergenic
AATAGAAGTGTTACAAACCA+AGG 0.594166 3.1:+9065892 MS.gene039590:CDS
CACATCTGAATCCCCACCGA+CGG 0.596959 3.1:+9066024 MS.gene039590:CDS
TTGATATCGTTGTGCTTGAG+TGG 0.601464 3.1:-9061106 None:intergenic
TTTCTCCACTAAATCAGTCA+AGG 0.602410 3.1:-9066499 None:intergenic
TGATTGCGACATGATTTCAC+CGG 0.603179 3.1:+9058038 None:intergenic
AAAAGAAAGAGAACTGATGA+CGG 0.606909 3.1:+9066585 MS.gene039590:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 3.1:+9060669 MS.gene039590:CDS
CGATAACTGAGTGCCGTCGG+TGG 0.609836 3.1:-9066037 None:intergenic
AAACAAACTTCCATCACCAC+CGG 0.609924 3.1:-9063213 None:intergenic
TCATCACTATCACTACTACA+GGG 0.615422 3.1:-9065686 None:intergenic
CAATACACAAACTCGAACCA+GGG 0.616195 3.1:+9065644 MS.gene039590:CDS
CACCGATAACTGAGTGCCGT+CGG 0.621891 3.1:-9066040 None:intergenic
AATCTCATCATCAACACCAC+CGG 0.622733 3.1:-9063183 None:intergenic
ATAACTGAGTGCCGTCGGTG+GGG 0.624044 3.1:-9066035 None:intergenic
TCACATCGGAGCGCGAGCAA+GGG 0.626724 3.1:-9058080 None:intergenic
AGCCACCTAAAGTCTGAAGT+AGG 0.626906 3.1:-9060322 None:intergenic
CATCACTATCACTACTACAG+GGG 0.634672 3.1:-9065685 None:intergenic
TTATGGAAGTTTGTTTCCGG+TGG 0.635538 3.1:+9063167 MS.gene039590:intron
GGGTCAAGGAGTTGGAGGCA+CGG 0.637387 3.1:+9059049 MS.gene039590:CDS
CATTATGGTTCAGAGAATGA+GGG 0.643278 3.1:+9060507 MS.gene039590:CDS
GATTCGTCAAAAGGAGATGG+TGG 0.644417 3.1:+9059118 MS.gene039590:CDS
ATATCAACTTCATCTGAGAG+TGG 0.645542 3.1:+9058471 MS.gene039590:CDS
GCATATGTTAGATTTGGCTG+TGG 0.647264 3.1:-9065746 None:intergenic
GATTTCAGCTTATCGACAGA+CGG 0.652942 3.1:-9061057 None:intergenic
ATCCCAACAGTCAACTGATG+CGG 0.661071 3.1:+9060584 MS.gene039590:CDS
TGATCAACAAGTTTCAAACG+AGG 0.672546 3.1:+9066536 MS.gene039590:CDS
GCGACATGATTTCACCGGCG+AGG 0.683680 3.1:+9058043 None:intergenic
TATCGATGAACCATCTGCTG+GGG 0.691010 3.1:+9061308 MS.gene039590:CDS
TTATGTGTCCATCTCCCCTG+AGG 0.697514 3.1:-9065581 None:intergenic
CTGCTAATGCAGTTCCTCAG+GGG 0.698980 3.1:+9065567 MS.gene039590:CDS
GCCAACATCAGACAGTCCAG+TGG 0.711751 3.1:+9058773 MS.gene039590:CDS
GATGAGATTGAAGATTCCGG+TGG 0.764386 3.1:+9063197 MS.gene039590:CDS
TGTCGCTGGAGAAATCACAT+CGG 0.764902 3.1:-9058094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.1 gene 9058048 9066614 9058048 ID=MS.gene039590
chr3.1 mRNA 9058048 9066614 9058048 ID=MS.gene039590.t1;Parent=MS.gene039590
chr3.1 exon 9058048 9058137 9058048 ID=MS.gene039590.t1.exon1;Parent=MS.gene039590.t1
chr3.1 CDS 9058048 9058137 9058048 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9058444 9059347 9058444 ID=MS.gene039590.t1.exon2;Parent=MS.gene039590.t1
chr3.1 CDS 9058444 9059347 9058444 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9059954 9060064 9059954 ID=MS.gene039590.t1.exon3;Parent=MS.gene039590.t1
chr3.1 CDS 9059954 9060064 9059954 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9060146 9060729 9060146 ID=MS.gene039590.t1.exon4;Parent=MS.gene039590.t1
chr3.1 CDS 9060146 9060729 9060146 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9060818 9060919 9060818 ID=MS.gene039590.t1.exon5;Parent=MS.gene039590.t1
chr3.1 CDS 9060818 9060919 9060818 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9061042 9061329 9061042 ID=MS.gene039590.t1.exon6;Parent=MS.gene039590.t1
chr3.1 CDS 9061042 9061329 9061042 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9063176 9063262 9063176 ID=MS.gene039590.t1.exon7;Parent=MS.gene039590.t1
chr3.1 CDS 9063176 9063262 9063176 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9065563 9065913 9065563 ID=MS.gene039590.t1.exon8;Parent=MS.gene039590.t1
chr3.1 CDS 9065563 9065913 9065563 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9066007 9066087 9066007 ID=MS.gene039590.t1.exon9;Parent=MS.gene039590.t1
chr3.1 CDS 9066007 9066087 9066007 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
chr3.1 exon 9066480 9066614 9066480 ID=MS.gene039590.t1.exon10;Parent=MS.gene039590.t1
chr3.1 CDS 9066480 9066614 9066480 ID=cds.MS.gene039590.t1;Parent=MS.gene039590.t1
Gene Sequence

>MS.gene039590

ATGATTTCACCGGCGAGGTTGCACGAATTTCACCCTTGCTCGCGCTCCGATGTGATTTCTCCAGCGACATTCGTACTGCATTTTGAAGAGGTAATCATGTATATGATTTTTGTTGTATTTAGGTTTTGATTCAAATTTCGGATTTGTTAATGGTTTTCTGCTCTTAGGATCAATTTAGTGATTCAAATTTAGTGATTCAATTGTTGATATTATGATCAATTTAGCTTCAGTTGTAGCAATTGGATAAGGATCAATTTTTCTTCGGTTGTAGTTTCAAAATTGTGCTTTAGTTGTAGTTTCAAAACCATTTCGAAATTTTGAGTTGTAGCAATTGAATATGTAAAGGAACAATTTAGCTTCAATTTATGATACCTAACGGTTCTTTGTTCTTAATAGTGTTTGTTGCTGTTTTCAATGGATTCGATATCAACTTCATCTGAGAGTGGACAACTGAGTGTTGAAACTTCATCACTGATTCATGCTGATAGTTCTCAATGTTACTCCCCTAGTAATAAAGAATCATGGAAGTCTTTAGTCTTTCAATCTATTAAAGAGATTGAAGATTTTTATGGTAATTATGCATATAACACTGGATTTTCTATTAGGACTATGTTGAAGTCGAAGAACAATTCACAAAATAAGAAATCAAATAAGGTACATTATGTACGTTATGTTTGTAACAAACAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAACAACAGGCCAACATCAGACAGTCCAGTGGTTATTGAGTTTGTGAAAGTGAAAGAAAAACCTGAGGAAAGGGTTGGTTGTAAAGCTGGAATATGTTTGAAGCTAGATGAAGTTTTGAATGTCTATAAGATATATAGATGGGATGTGGCTCACTGTCATCCATTACATAAACCAGAGCATTTGTGTTACCTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTCGCTGTAATAAATTTTAAAGCTGGAATGTCGATGAGAACGTCTTATGAAGTTATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGGTTTTCAGACTTAAAGAACTATCTAATGACGATTCGTCAAAAGGAGATGGTGGTTGGTGAAACAACTGTAATTCAAGAATTCTTTAGAAATGAAGCTCTCTCGAAACCATCTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGGATTATGCAACTAGATTATTCTCTATTTGACGATGTCATCAGTTTTGATACAACCTACCGAACGAACAATCAGTATCGACCATTAGGTTAGTATTTTGTACTTCTCTTAGGTTTTAAATTAGTGTTTACTTTCATTATGTTGTATTTTGTTCGGGCATGGATAGTATAGGTAGGAGTACATTTTGAACTGCCTAGTGTGTAGGTGTGTGTGTCATATGTGTCCGAGTCTGTAGTTTAAGAGATCTCTAGTCTACTGATTTTTTTTTCCAAATGCATTTATGTTTAAGAGATCAGTGGGAAACTTGACTGTAAGATTGATAAAGTTGCAGGCATTTTTGAAACTAACCGCCTTGATCATAAGAATGCTCTTTACTTAGCAACCATTAAGCAAGGATACATCTTGTATTGAACAGGATCCAGAAATTGTCATGTGTGATCGATCTTTAGTACATATTTATTAGATATGCTATGATCGAGAGTTTCTCATTTTTGTTTTATCATTGAGTTTACTCACTGCTGAGGCGTGATTTCTTATAATTAGTGATTACAGACTAGCAATCACTAATTATAAGAAACATAAATGCATTCTAATTGAGGGTTGGAATGCACTTAAATTAGTGATTGCTTTCATTATTTAATGTAAGTTATATATAGGTTGTATTTTGTTCTGATTTGGGTCATTTACATTTCAGCTGCCTTTATTGGTTTTGACAATCATCGTAAGAGTGTTTTATTTGGTGCTACGCTACTGTATGATGAGACAGCAGCTACTTTTGATTGGTTGTTTACAACATTCTTGAAGTGTATGTCCAATAAGAAACCACAGACGATATATACAGACCAGGCTAGTGCGTTGTTGAATTCAATTCAGAATATTTTTCTAGGTGTTTTTCATGGGCTTTGCTCATGGCACATGGCAGAGAATGCAAAGAAAAATCTCGGCTCTCATGCAAACAGTGCATTTTTCTATGAGTTAACTAATTTGGTTTCAAATGTAGACGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAATTGTTTTAATGGAAGGCCTACTTCAGACTTTAGGTGGCTTGTCCAAACTTACGGAAATCTTATGCATTGGTCTTCAGCTTGGGTTAAGTCACATTTTGCAGCTGGTCTGAAAACGACTCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTCTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTCAAGGCTGCAAACACTAGATCAAAAAATAATTATCCCAACAGTCAACTGATGCGGTTCGTTGTAAACAAGTACACACCAGCTTGCTTTGCATTTATTCACAGGCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGCCTTGAACAAGTTTTTCAAAGTTTTTACAATTGAAAAAGTTGATGATAATTATGACGATGCTGATAATGATAATGACGGGCCTTCCAATGTTGATGTTTTGGATGCAGAACTTTAAGAAAACCTTTTCCCAAGTTTTGAAGATCATGATCGACTTGATGAAAGGGTTGTCACAGTTGACATTAGAAGCAAAAGTTTTAGATGTTCATGTCGTATGTTTGAGAACAGGGGCTTCTTATGTCGACATGTTTTGAAGATCTTGGAGTTCTTAAGTGGTTATGTGCAATATCATTTTTTGAAGACAATACCTGGACAATATGTTTTAAAGTATTAGATTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCGACCATCAATGTTGGCACTGAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGTTGTTACAGTTCAGCTTTCTACACGTTTTTGTGCAGATCTGGAGGCATCTGAAATTTTTCTCGACGGTGTTCTTGAATCTGGGAAAAAGGCAGAAGAGTTGCTTCTTTCTAAAGGTATTCGTACATACCCATCTTACATGACGCCATCTAAGTCTTCAAAAGTAACTGCTATCGATGAACCATCTGCTGGGGTGAAGTCCACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAAGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAGAAAGGCAGAAATTCCTTATAAATCGGAATAAACAAAAGAGAGATGATGAAGCTTTAAAAAAAAAAAGTGGTCACTTATTGATTGTTTTTATGTTATAAGTTTGTACTAGATTTTATTGGGAATATTTTGATATAATCTATTGGAAATTATACATTTCACATTCTTTATTGTTATGTATTGATGATTATAGTTTGGATATGATCTATTGAAAATTATACATTTCACATTCTTTGTTGTTACGTATTGATGATTATAGTTTGTTACAAAACAATTAGACAATTATTTTGGTTTCATATAGAACACTATCAAAACCATTAAACCATACTTATGGTTTCAGTAATAGTCATTATTTAAAACAATTTATCAATAATAATTTTCATTATTCTTTTATTTTATAAACCATTAGACAATTATTTTTCTTTCACATACAAGTCTATTAAAACCATTAAACCACAATTATATTTAGACAAAGGCAGAAATTCGTTTTACAACGGAAGAAACAAAAGAGAGATGATGAGGCTTTACAAAAAAAAGTGGTCACTGATTGATTAATTCACATTAGGTAATTGTTTTAAATATTATAAGTGTGTACTATAGTTAGTGAATAATGGTTTAAATGTTTATCACATTTGTTCTTTTGTTTTATTACAAAACCATTAGACAATTATTTTGGTTTTACAGTGAAGACTATCAAAACCATTAAACCATACTTATGGTTTCAGTAATAATATCAGTGTATAACATCTTAATCATTATTTAAAACCATGTAGCAATAATAATTTCATCATTTAAAATCATTACACAATTATATTGGTTTCACATACAAGACTATCAAAACCATTAAACCATACTTATTGTTTCAGTAATAATTTCAGTGTATAATATCAGTCAATACTTACATACAAGAACGGTCACTGCAAGAATATGTTGATCTTGCTATGTTGCAACCTAGATCTCCCTAAGACATATCCCCATTACCATTAAAATCTCCTTAAGACATTTAAACATAAATACATTAAGCAAATTCTATAGTTTAGTAAACCTAAGACATTTTCTACTAAATTAAATATGGCGAAACAATACGAATTTTCTACTAAATTCTACTAAACTATAGCTTTATAGATCCTCCTATTTGTAACAACATTAAGCAAATTTCACACTATTCTACTAAACTATAGGTTTACAATTTTTTCACCTACTGGATCAAAGAAAACCATTAAGTATATCTAATGGTTTTGGAGTACAACACATAGAAACCATTTCCACAGCAAAATAGTTTTGGTATAATTTTATACAAAACATACTATAATAAGGACATTTCCAAATCAACACTCTGAAACCATTTCCAACTAACATATACAATTTTTAAACTATTTATTTGAGTTGATTTTCCCCAATTCGAAATATGACTGTCAATTTAGGGTTACACAGATGCAATTACTTTCCAACTAAATAAAACCATTTCCAACTAACAGAAACACTTTCAAAACTAATATGTTAAAGCACAAGATAAATTCAAACCTGTTTTGTGTTCATCATTTTTGCTATTTGTTTCGTTTGAAGATGATGAATGACGGTGATGAGTGTGATGATGGTTCTGGTACGATGATGATGATGATGAAGATGATGGTTCCAATCTCAGTTACGGTGAATGACGGTGGTGATGATGATTATGATTCCGATACGGTGAATGACAATGGTGATGATGATGAACGACAGTGTTGATTATGAGATTGAAAATTCCGGTGGTTATGGAAGTTTGTTTCCGGTGGTGTTGATGATGAGATTGAAGATTCCGGTGGTGATGGAAGTTTGTTTCCGGTTATGAGAGTTTGTTTCTGTTTGGTTCGTTTTGAAGACGTTTTACTTGGTTCCGCGTTTGGTTCACTTATGCAGGGTGTAAGAAGCAATTTTGTTGGGCTACCAGTTAATGGGCTGAGACTTATGCATGGTGCATAAGGATTCCTTGTGCATGATAACCACACCCCTGTTCAGTAGGTTTTATAGTATGTTTTAATTTTTTTCAATTGTCCAAACAAAATATAATATAATAGAACGACATTACTAATGCACCTCCTGTTTTTCAAAATCATGCTAGCTACTAGTCATAAAACCACTGCACTTTCCTTTCTCACTTTTACATATCTTAAAAAACTACCCACTGACTCATTTTAATAGTCGCTTTAAATTTGCGTGTAGTTTTAAAAAAGATATTAGTTGAGTTTATTTTAATGATAAAATGAGTATAATTTATTAAAACACTTTCATTAATTGTAGTTTTTTTAAACAAAACTTTTATTACGGAGTAGTTAACTGAAGTGGAATTCAATAAATAAGGTATAATCTTATAAAAATTATTTATTTATTCCGTATTTATATTATTAGGGACAAATACTTATTCAGTATTTTTATATTATCAATGACAAATATTCATCATGTGCTTTTTATGTATCAATGATGTTTCATCTGCATTTAATCAGTACATTAGATTCTTCCTGATGTCAATTTTGATCGAGTAATTGTCCTTTTAAAAAATAGTATTTATTACGTTATTACTAGCTTAAGCAAACAACTATGTTATAAAAACAAAAAACAAAACTATGTATAAATACAAAAATTAACAAAATCAACCTTTTGTTGCATTTAATTGTCATATTTCGATATTTTATTTTTCTTTTTACAAAATCCGGATTAAAAAATTTGCCAAAAAAAATATCTGGAATTAAAAATGTTATGTTTGAGTTGACTGTAGAATTGATTAGTTTGTTTCGAATATGTACTGATATTAACACATTGAGGGTGACCCATTATTACTGCACTTAAAAAAACCAGGATAAACAACTATTGTGGGGCCTTTTTTTGTTTTAAGTGTATCAACAAAATGTTAAGATTAAGTAACCAGCCAATCATCTAGTCTGTGGAATAAATGTGAAACGTCACCATAGTTTCAACCTAACCATATCTTGAGACTTGAATGAAAGAAGGCAGACCAAGTTATCCAACTAGAAGACAATATGGAGCAGAAACTTTTAACTTTGACACAAAATCATGTCTAAGTTTTCACCATAAAAAATAATTGAAGTTGACAAATGCATGCTACAAAAGTGCTTTGCTTTATCGTTCATAAAAGTAAACTTCCCATCACCTCACCTCAACACAGAACCTTGACAAATCCCTATCCCAATTTTTTCCCTTTCAATGAAATGAAACCACAAATCAATAAATGTCTTCTCCTAATTAAACTCCCTAGCATCTCACCTCACTTTACTTCTTAAAGCCTTTACCCACCTGCACACATTACCATAATTTCTTATAACATTGAGAGAGAAAAAAACAGAGATCGCTTGTGATTTTCTTTCTCTTCTTCTTCTAATACTCAAAATCTTTCAACTCAGCCTTAGCCCAATACTCATTCTCTGCTCTTCACCTTTCTCTCCTGCATCATGGTAGAACTTCCAAGAACAAAGACGCTTTCTTGTTGGTATGCAAATTTCTCTCTCGTCTTTTTTGTTTCGTTGTTGCGTTTTCATTACCATGTTCCTATTTTGGTGTTTTTTTTTCATGGATCATGTTTAGTTTAGGGCTTATGGTTTAGCTAGGGTTTTTTGATTTTCCAATGTTTTCATGAACGAATGTTAGGAGAAATACGAGAGCTTTCGTTTTGTGGTTGCATGCATTCGTGAGTGTGTTGTTGACTTTTCATTATTTTGTAGTTTCTATGTGGAAAGCTTGCTTTTGTATCTAATTTTTGAAATGTTTTTAAAAGATGTTTTCACTTTTCAAGGTTATGTGTTTTTACCATGGGATCCGATTTAGTGTGAGTGGTTGGTGTACACAAGGTGGTTGACTTGGATCTGGCTCCTCTAACGTGAAGAAGCACACATTTAAAAAAAACATTAATTTTGTGTCGTTTGGAAGTGGATCTCGCCATTTCGGATTTAACTTCTATGAAGTGGACTCTCACTTTAGAGAGTTATCTGTCATGTTTTAACCGTTTGATGAAAATATCAGTTAGTGATATTTGTTGTGCATGAAATATCATATACTGATTTATGAAAAAATGAATTGTTTATGGATTTATGATTGAATTAACAAATCATGTATCATATATGTTCACTCAATATTGTCTTTTTCTCATTCCACAGATTGCTGCTAATGCAGTTCCTCAGGGGAGATGGACACATAATTTGAGGCGTTCTGCACGCATTCAATCCACAAACTGCATTCAATACACAAACTCGAACCAGGGCAAATCCATTGAATATATCCCCTGTAGTAGTGATAGTGATGATGAAGAGGATTCTCAAATTGATTCACAGCAAGTATTGCCACAGCCAAATCTAACATATGCTCAAACTGAGCCAGTGCAAGTATTGCCACATGAGAAAAATGCCACGTCTGGAAATTTAAGTGGAAAGAGTTTGAATGTAAAAGTTGATTATGCATTACTCAAAATCAAAGATTTGTATGAGATAATAGAAGTGTTACAAACCAAGGTATACTATAAACTTAAGACAACATGCCGTTGTTATTTTTTTTTGTTATAAGTGTGATGCCGCATTGGTGAATATATTTCGAACACATAACAGATTGATGGAAATGTTGGCACATCTGAATCCCCACCGACGGCACTCAGTTATCGGTGCATGTACTTTGATTCCCAGAAGAAGGTTTTGTTTTCAATTTATTCATTTTAGAAAGAAAAAAAATCGTAATGCCATTTTTAAGCCTACTTTTTTTGTCTGATTATCCCATATTTCATATATGTTGTGCACTAACTTACATACATATACGCAACTTGAAGAATTAACCAACGTAAATAAACATCTAAACACGCTATTGGAAAATGCTCTTGGCACAATTAAAGAGGTATGTTGTGTGATATCTATTTTGGTTAATAGTTAAAAATTTGTTTATGATCTTATTTTGGTACCGGTGTAACATCTGATCTTGTGGATATTTTCAAGATTATAAAATTGTATATGTTAACTAATTAAGTTTTTAGTTGATTTGATGTATAGTTGATTTAATGTATTCAACCATATACCTTTTGATATTGGAGGAAAAAGAAAATAATGCTGCCTTGACTGATTTAGTGGAGAAAATGAAGGATTTTTTTGATCAACAAGTTTCAAACGAGGCAAACACAGCTGAAGCCGCTGCCGGTAAAAGAAAGAGAACTGATGACGGAAAATGA
Protein sequence

>MS.gene039590.t1

MISPARLHEFHPCSRSDVISPATFVLHFEECLLLFSMDSISTSSESGQLSVETSSLIHADSSQCYSPSNKESWKSLVFQSIKEIEDFYGNYAYNTGFSIRTMLKSKNNSQNKKSNKVHYVRYVCNKQGFKKGSLLNPNNRPTSDSPVVIEFVKVKEKPEERVGCKAGICLKLDEVLNVYKIYRWDVAHCHPLHKPEHLCYLRSFREVNEVQGQLAVINFKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGETTVIQEFFRNEALSKPSFYYDIQVDAAEDIASIFWADGIMQLDYSLFDDVISFDTTYRTNNQYRPLAAFIGFDNHRKSVLFGATLLYDETAATFDWLFTTFLKCVFHGLCSWHMAENAKKNLGSHANSAFFYELTNLVSNVDDESDFDYNWDQMMKNCFNGRPTSDFRWLVQTYGNLMHWSSAWVKSHFAAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRSKNNYPNSQLMRFVVNKYTPACFAFIHRQYDLSFKYYYEEDTTKGSALNKFFKNFKKTFSQVLKIMIDLMKGLSQLTLEAKVLDVHVIRDVRPSVDKLKSTINVGTEDTTQAQRYQQICVVTVQLSTRFCADLEASEIFLDGVLESGKKAEELLLSKGIRTYPSYMTPSKSSKVTAIDEPSAGFVSGGVDDEIEDSGGDGSLFPVMRVCFCLIAANAVPQGRWTHNLRRSARIQSTNCIQYTNSNQGKSIEYIPCSSDSDDEEDSQIDSQQVLPQPNLTYAQTEPVQVLPHEKNATSGNLSGKSLNVKVDYALLKIKDLYEIIEVLQTKIDGNVGTSESPPTALSYRCMYFDSQKKEKENNAALTDLVEKMKDFFDQQVSNEANTAEAAAGKRKRTDDGK