AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03975

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03975.t1 MTR_3g464290 76.770 452 69 5 537 986 54 471 0.0 649
MS.gene03975.t1 MTR_3g464290 51.870 401 106 8 8 377 99 443 4.69e-95 309
MS.gene03975.t1 MTR_3g464290 58.763 97 29 3 397 484 306 400 8.41e-21 97.4
MS.gene03975.t1 MTR_3g464270 70.419 382 67 5 1 370 1 348 6.46e-173 508
MS.gene03975.t1 MTR_3g464270 56.117 376 137 5 582 956 8 356 1.22e-122 378
MS.gene03975.t1 MTR_3g464270 52.128 94 36 2 408 492 246 339 1.99e-14 76.6
MS.gene03975.t1 MTR_1g075890 54.583 480 153 7 541 968 187 653 7.09e-136 423
MS.gene03975.t1 MTR_1g075890 49.577 355 123 8 8 350 228 538 5.17e-83 282
MS.gene03975.t1 MTR_1g075890 76.623 77 18 0 410 486 467 543 1.14e-27 120
MS.gene03975.t1 MTR_3g464260 49.784 462 138 8 539 1000 162 529 1.89e-116 368
MS.gene03975.t1 MTR_3g464260 43.132 364 124 10 39 395 213 500 5.20e-66 232
MS.gene03975.t1 MTR_3g464260 73.214 56 15 0 432 487 401 456 1.03e-15 82.0
MS.gene03975.t1 MTR_5g071070 43.595 523 207 17 549 999 115 621 2.28e-102 334
MS.gene03975.t1 MTR_5g071070 38.131 396 176 13 8 350 147 526 4.36e-57 209
MS.gene03975.t1 MTR_3g464280 51.392 395 140 7 546 940 151 493 7.98e-102 328
MS.gene03975.t1 MTR_3g464280 42.857 378 127 11 8 367 187 493 1.86e-60 215
MS.gene03975.t1 MTR_3g464280 79.221 77 14 1 408 484 389 463 4.08e-28 120
MS.gene03975.t1 MTR_5g071070 43.595 523 207 17 549 999 197 703 6.29e-101 332
MS.gene03975.t1 MTR_5g071070 38.131 396 176 13 8 350 229 608 1.10e-56 209
MS.gene03975.t1 MTR_5g082830 39.201 551 238 21 508 991 154 674 2.97e-86 292
MS.gene03975.t1 MTR_5g082830 34.568 405 181 13 8 352 216 596 3.97e-50 189
MS.gene03975.t1 MTR_3g070880 40.139 431 172 15 547 958 122 485 2.75e-70 243
MS.gene03975.t1 MTR_3g070880 61.017 118 43 2 8 123 162 278 2.11e-42 163
MS.gene03975.t1 MTR_7g092070 36.364 462 206 14 560 958 241 677 1.31e-62 227
MS.gene03975.t1 MTR_7g092070 40.727 275 124 9 8 263 263 517 2.04e-48 185
MS.gene03975.t1 MTR_3g029590 43.369 279 133 5 560 815 241 517 3.34e-59 217
MS.gene03975.t1 MTR_3g029590 34.551 356 171 11 8 325 263 594 6.59e-44 171
MS.gene03975.t1 MTR_1g050438 40.217 276 131 6 563 815 208 472 3.47e-52 194
MS.gene03975.t1 MTR_1g050438 33.708 267 143 8 8 262 227 471 2.69e-34 140
MS.gene03975.t1 MTR_0728s0020 40.217 276 131 6 563 815 224 488 7.70e-52 193
MS.gene03975.t1 MTR_0728s0020 33.708 267 143 8 8 262 243 487 3.42e-34 140
MS.gene03975.t1 MTR_3g435590 61.194 134 51 1 562 695 217 349 1.67e-47 177
MS.gene03975.t1 MTR_3g435590 49.359 156 63 5 8 151 237 388 5.08e-37 146
MS.gene03975.t1 MTR_3g435680 49.143 175 83 4 560 733 130 299 1.97e-45 169
MS.gene03975.t1 MTR_3g435680 45.752 153 73 4 8 151 150 301 1.27e-37 146
MS.gene03975.t1 MTR_8g102100 45.455 165 83 2 579 737 77 240 1.73e-40 154
MS.gene03975.t1 MTR_8g102100 51.587 126 58 2 7 130 79 203 6.02e-37 144
MS.gene03975.t1 MTR_6g090380 56.757 111 47 1 577 687 97 206 2.31e-40 154
MS.gene03975.t1 MTR_6g090380 55.238 105 44 2 8 110 102 205 3.26e-34 135
MS.gene03975.t1 MTR_2g090605 57.143 112 47 1 583 694 77 187 1.76e-38 149
MS.gene03975.t1 MTR_2g090605 50.893 112 52 2 9 118 77 187 3.30e-31 127
MS.gene03975.t1 MTR_3g103960 53.846 117 52 1 8 122 52 168 3.18e-37 142
MS.gene03975.t1 MTR_3g103960 46.452 155 62 5 573 726 43 177 6.72e-37 140
MS.gene03975.t1 MTR_4g078660 53.211 109 50 1 579 687 56 163 2.01e-35 137
MS.gene03975.t1 MTR_4g078660 49.524 105 50 2 8 110 59 162 3.97e-29 119
MS.gene03975.t1 MTR_1g081420 72.917 48 13 0 434 481 181 228 2.07e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03975.t1 AT5G58620 42.381 420 200 15 560 958 186 584 3.78e-80 273
MS.gene03975.t1 AT5G58620 35.734 361 181 12 8 350 208 535 4.83e-48 182
MS.gene03975.t1 AT2G40140 38.375 443 236 11 559 1000 190 596 1.70e-74 257
MS.gene03975.t1 AT2G40140 38.710 279 125 7 8 281 213 450 2.43e-46 176
MS.gene03975.t1 AT2G40140 38.375 443 236 11 559 1000 190 596 1.70e-74 257
MS.gene03975.t1 AT2G40140 38.710 279 125 7 8 281 213 450 2.43e-46 176
MS.gene03975.t1 AT3G55980 40.796 402 183 16 565 958 193 547 1.12e-68 241
MS.gene03975.t1 AT3G55980 40.357 280 113 15 8 281 210 441 1.79e-41 162
MS.gene03975.t1 AT3G55980 40.796 402 183 16 565 958 260 614 2.66e-68 241
MS.gene03975.t1 AT3G55980 39.711 277 119 12 8 281 277 508 3.99e-41 162
MS.gene03975.t1 AT2G41900 47.328 262 125 5 562 815 240 496 1.88e-63 229
MS.gene03975.t1 AT2G41900 41.245 257 116 6 8 256 260 489 1.10e-49 189
MS.gene03975.t1 AT5G12850 38.129 417 192 18 560 922 234 638 2.08e-59 217
MS.gene03975.t1 AT5G12850 39.179 268 131 8 8 263 256 503 2.02e-45 176
MS.gene03975.t1 AT5G07500 57.377 122 51 1 565 686 34 154 1.92e-44 161
MS.gene03975.t1 AT5G07500 52.381 105 47 2 8 110 51 154 2.43e-32 126
MS.gene03975.t1 AT2G19810 56.198 121 52 1 568 688 63 182 4.51e-42 158
MS.gene03975.t1 AT2G19810 52.336 107 48 2 8 112 77 182 6.78e-33 131
MS.gene03975.t1 AT4G29190 48.649 148 60 2 572 719 68 199 1.02e-41 157
MS.gene03975.t1 AT4G29190 43.919 148 80 2 8 153 78 224 1.11e-34 136
MS.gene03975.t1 AT2G25900 42.778 180 100 2 579 756 86 264 2.31e-41 155
MS.gene03975.t1 AT2G25900 49.606 127 61 2 8 132 89 214 1.66e-35 138
MS.gene03975.t1 AT2G25900 42.778 180 100 2 579 756 86 264 2.31e-41 155
MS.gene03975.t1 AT2G25900 49.606 127 61 2 8 132 89 214 1.66e-35 138
MS.gene03975.t1 AT1G03790 48.026 152 68 4 576 723 75 219 1.14e-37 146
MS.gene03975.t1 AT1G03790 51.667 120 53 2 8 122 81 200 3.68e-34 136
MS.gene03975.t1 AT5G44260 51.562 128 56 3 562 688 43 165 2.48e-36 142
MS.gene03975.t1 AT5G44260 53.636 110 49 1 8 115 59 168 6.09e-34 135

Find 239 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAACCTTGAAGGCTATTT+TGG 0.138965 3.2:+54791684 MS.gene03975:CDS
GAATGTCCCTTTGCTCATTC+TGG 0.150818 3.2:+54795648 MS.gene03975:CDS
GCCTTCTACTTTCTCTGATT+GGG 0.197083 3.2:+54793955 MS.gene03975:CDS
CAACTGTAATAATATTTCTT+TGG 0.259700 3.2:-54795693 None:intergenic
TCATATCTTGAATTCATAAA+TGG 0.281986 3.2:-54796383 None:intergenic
AGCCTTCTACTTTCTCTGAT+TGG 0.288690 3.2:+54793954 MS.gene03975:CDS
AAAGAAGAACTTACAGAATA+AGG 0.288709 3.2:-54795015 None:intergenic
AGAACAACGCTTTGCAATAA+TGG 0.289322 3.2:+54791189 MS.gene03975:CDS
GCAAACTCTTCTTGTGCAAT+AGG 0.292594 3.2:+54793638 MS.gene03975:CDS
ATGGAACATCGTCCGGATTA+TGG 0.301107 3.2:-54796769 None:intergenic
CAGAACCAAGATTGCCTTAA+GGG 0.313508 3.2:+54795441 MS.gene03975:intron
GAAGACTCAAATAGGCTTGC+AGG 0.318266 3.2:+54796206 MS.gene03975:CDS
CTTCTACTGCCTTCTCTGAT+TGG 0.322323 3.2:+54796501 MS.gene03975:CDS
CATTATTAAGCCAGGAATCT+TGG 0.322794 3.2:+54796666 MS.gene03975:CDS
TATATAATACAGATGAATTT+AGG 0.325192 3.2:+54795568 MS.gene03975:CDS
TGAGTGGATCACAACAATTC+AGG 0.326132 3.2:+54793834 MS.gene03975:CDS
TGATCCACTCACATTTGAAT+TGG 0.333758 3.2:-54793822 None:intergenic
CTGCTCCCTTAAGGCAATCT+TGG 0.349917 3.2:-54795446 None:intergenic
CAATGATAGAAGACTCAAAT+AGG 0.353929 3.2:+54796198 MS.gene03975:CDS
CTTTCCGATTCAAATGTGAT+TGG 0.358142 3.2:+54796338 MS.gene03975:CDS
CTATTTGAGTCTTCTATCAT+TGG 0.358396 3.2:-54796197 None:intergenic
TTCAGCCAAAGGTTATACTA+TGG 0.366113 3.2:+54793585 MS.gene03975:CDS
TGGTTAGATCACAACAGTTC+TGG 0.369424 3.2:+54791799 MS.gene03975:CDS
CTACTTGACCCTTCTATCAT+TGG 0.369851 3.2:-54791642 None:intergenic
GGACACAAATCAGCAACTTT+GGG 0.371746 3.2:+54793781 MS.gene03975:CDS
ATGCCGAATCCAATGATAGA+AGG 0.372921 3.2:+54791633 MS.gene03975:CDS
GAAGGGTCAAGTAGGCTTGC+TGG 0.383335 3.2:+54791651 MS.gene03975:CDS
AATATAGATCATGCAGTAAA+GGG 0.387652 3.2:+54791109 MS.gene03975:CDS
GGGACACAAATCAGCAACTT+TGG 0.388854 3.2:+54793780 MS.gene03975:CDS
GTGAGCTAACCCAAGATTCC+TGG 0.390717 3.2:-54796676 None:intergenic
TGATCTAACCACATTAGAAT+TGG 0.391379 3.2:-54791787 None:intergenic
GACCCTTCTATCATTGGATT+CGG 0.397498 3.2:-54791636 None:intergenic
TGCTGCTCTCGATAAAGTTC+TGG 0.399385 3.2:-54791869 None:intergenic
TAGAGTAGCCACACAGTTCT+TGG 0.402660 3.2:-54796310 None:intergenic
CCGTGATAGAAAATTAGAAT+TGG 0.404340 3.2:+54791968 MS.gene03975:CDS
AAATAGCCTTCAAGGTTAGT+AGG 0.408517 3.2:-54791681 None:intergenic
TAGTCTTTCTTCATACTTCG+AGG 0.412316 3.2:-54795507 None:intergenic
ATGACCCGAAAATGTCTTCA+TGG 0.413038 3.2:-54796244 None:intergenic
TTCAACAGGCGAAGCTCCTC+GGG 0.413095 3.2:-54795879 None:intergenic
TTGGTGAAGGTTCAGAAACT+TGG 0.413564 3.2:-54794977 None:intergenic
ATGAACCAAAATAGCCTTCA+AGG 0.414283 3.2:-54791689 None:intergenic
CGAGGAGCTTCGCCTGTTGA+AGG 0.414602 3.2:+54795881 MS.gene03975:CDS
AAATGTCCCTTTGCTCATCA+TGG 0.414986 3.2:+54791018 MS.gene03975:CDS
TTTCGAAACCTGCTCCCTTA+AGG 0.416476 3.2:-54795455 None:intergenic
AATGTCCCTTTGCTCATTCT+GGG 0.417384 3.2:+54795649 MS.gene03975:CDS
TCTGAACCTTCACCAAGTTT+CGG 0.418005 3.2:+54794984 MS.gene03975:CDS
AAAATGTCTTCATGGTTAGT+AGG 0.419191 3.2:-54796236 None:intergenic
GCACATGGTGTTCTTGAGTC+CGG 0.419484 3.2:+54791147 MS.gene03975:CDS
ATTGCGGTTATGTTCATGAT+TGG 0.421921 3.2:+54790992 MS.gene03975:CDS
ATCTGCTACCTTAGTTGCCA+TGG 0.427041 3.2:+54793931 MS.gene03975:CDS
ATTATTAAGCCAGGAATCTT+GGG 0.427376 3.2:+54796667 MS.gene03975:CDS
GGCCACATGGTTCTTTCTGC+AGG 0.427795 3.2:-54791489 None:intergenic
AATCTTCGTCGACGCTGCCT+TGG 0.429261 3.2:+54796006 MS.gene03975:CDS
CCCCAATCAGAGAAAGTAGA+AGG 0.430324 3.2:-54793956 None:intergenic
ATGACGACATCTTATTCATT+CGG 0.431815 3.2:+54796578 MS.gene03975:CDS
CTCATTCTGGGGAAATTGCA+AGG 0.434253 3.2:+54795661 MS.gene03975:CDS
AATTATATTGCTTCGGATCA+CGG 0.437370 3.2:-54791056 None:intergenic
GAGCCTTCAACTGCCTTCTC+CGG 0.438785 3.2:+54791936 MS.gene03975:CDS
AACTGGTATAAGCCTTCAAC+AGG 0.439127 3.2:-54795893 None:intergenic
TATACCTCATTCTTTATGTC+AGG 0.439563 3.2:-54795549 None:intergenic
TTCGACCATAGTATAACCTT+TGG 0.440917 3.2:-54793590 None:intergenic
TACATCAAATGTTGATGATC+AGG 0.442359 3.2:+54792022 MS.gene03975:CDS
TGCTAGAGATAATACTCATC+TGG 0.443782 3.2:+54791584 MS.gene03975:CDS
CAATCAGAGAAGGCAGTAGA+AGG 0.448046 3.2:-54796500 None:intergenic
TTTCTGAAATTCATTACAAT+GGG 0.449878 3.2:-54791088 None:intergenic
TTCAACGGGCGAAGTTCCTC+AGG 0.454486 3.2:-54791252 None:intergenic
TCTATCACGGGAGCGCCAAC+CGG 0.454780 3.2:-54791955 None:intergenic
CATCTGTAATTATATTGCTT+CGG 0.456547 3.2:-54791063 None:intergenic
TTGCTCGGCATCTGAGGTGT+AGG 0.459489 3.2:-54791450 None:intergenic
TTGCTCGGCATCTGAGGTGT+AGG 0.459489 3.2:-54791540 None:intergenic
CGTGATAGAAAATTAGAATT+GGG 0.460547 3.2:+54791969 MS.gene03975:CDS
AGATTCTACCTCAGTTGCAT+TGG 0.462466 3.2:+54791914 MS.gene03975:CDS
AACTGGTACTAGCATTCAAC+GGG 0.465209 3.2:-54791266 None:intergenic
CAAGATTGCCTTAAGGGAGC+AGG 0.465339 3.2:+54795447 MS.gene03975:CDS
ATGTGAAGGCAAAGCAGAAC+TGG 0.466124 3.2:-54791283 None:intergenic
CTTCAACAGGCGAAGCTCCT+CGG 0.466146 3.2:-54795880 None:intergenic
CTTCAACTGCCTTCTCCGGT+TGG 0.466199 3.2:+54791940 MS.gene03975:CDS
AGTTGAAGGCAAAGCAGAAC+TGG 0.467989 3.2:-54795910 None:intergenic
TCAAAGTGAAACTTTGCTCA+TGG 0.468456 3.2:+54795601 MS.gene03975:CDS
AATGCAACTGAGGTAGAATC+TGG 0.470321 3.2:-54791912 None:intergenic
CAAAACCGTAAAACAACAAA+AGG 0.471477 3.2:+54794915 MS.gene03975:CDS
CAACCGGAGAAGGCAGTTGA+AGG 0.471582 3.2:-54791939 None:intergenic
CATTGTTATGAATTTCAGAA+TGG 0.474142 3.2:+54795720 MS.gene03975:CDS
TGTTGATCAGATTCCAATGT+TGG 0.474488 3.2:-54796716 None:intergenic
AGAAGGCTCCATGGCAACTA+AGG 0.474619 3.2:-54793939 None:intergenic
CAGAATGGATCATGCAGTAG+AGG 0.475417 3.2:+54795735 MS.gene03975:CDS
AACCTTGTTCTGTATTGAGC+AGG 0.477792 3.2:-54795804 None:intergenic
ACAATCTCCGACAGCAATGA+AGG 0.478623 3.2:+54791716 MS.gene03975:CDS
TATAACATGCACAATTGCTC+TGG 0.478779 3.2:-54796797 None:intergenic
TTTGAGTTTGATGTAGTTGA+AGG 0.479247 3.2:-54795924 None:intergenic
CCTTCTACTTTCTCTGATTG+GGG 0.479569 3.2:+54793956 MS.gene03975:CDS
AAATATAGATCATGCAGTAA+AGG 0.479750 3.2:+54791108 MS.gene03975:CDS
GACTAGTGCAGCAGCTTGGT+GGG 0.480052 3.2:+54794876 MS.gene03975:CDS
CATTTCATTGAGTTTATCAC+CGG 0.482092 3.2:-54796558 None:intergenic
CAAGATATGATGCCCTTTCG+AGG 0.483484 3.2:+54791841 MS.gene03975:CDS
GGCCACATGGTTCTTCCTGC+AGG 0.483695 3.2:-54791399 None:intergenic
GCAGAACCAAGATTGCCTTA+AGG 0.484513 3.2:+54795440 MS.gene03975:intron
TGACTAGTGCAGCAGCTTGG+TGG 0.484939 3.2:+54794875 MS.gene03975:CDS
TACTATGGTCGAAGCTCCTC+GGG 0.485890 3.2:+54793600 MS.gene03975:CDS
GAATTATTCATTATTAAGCC+AGG 0.489175 3.2:+54796658 MS.gene03975:CDS
AATAATATTTCTTTGGATCA+CGG 0.489268 3.2:-54795686 None:intergenic
ATTTCTGAAATTCATTACAA+TGG 0.490595 3.2:-54791089 None:intergenic
CAAAGTGAAACTTTGCTCAT+GGG 0.491995 3.2:+54795602 MS.gene03975:CDS
GGATAGGATGGAACATCGTC+CGG 0.492237 3.2:-54796776 None:intergenic
CCACTGATAGAAAGGTAGAT+TGG 0.492569 3.2:+54796528 MS.gene03975:CDS
TGCCTTCATCGATGCAGCCT+TGG 0.493329 3.2:+54791355 MS.gene03975:CDS
AAGGAAACTGCACCGAAACT+TGG 0.493835 3.2:-54794996 None:intergenic
ACGGGAGCGCCAACCGGAGA+AGG 0.494199 3.2:-54791949 None:intergenic
ATACTATGGTCGAAGCTCCT+CGG 0.494840 3.2:+54793599 MS.gene03975:CDS
CTCATTCTTTATGTCAGGTA+GGG 0.495669 3.2:-54795544 None:intergenic
TAAGGGAGCAGGTTTCGAAA+TGG 0.496035 3.2:+54795458 MS.gene03975:CDS
TGATCCAATCACATTTGAAT+CGG 0.499162 3.2:-54796342 None:intergenic
TTCACCAAGTGCTTCTGCAA+TGG 0.503279 3.2:+54795947 MS.gene03975:CDS
CACAATTGCTCTGGATAGGA+TGG 0.503842 3.2:-54796788 None:intergenic
AATCTGTTGCTCGGCATCTG+AGG 0.505565 3.2:-54791546 None:intergenic
AATGTCCCTTTGCTCATCAT+GGG 0.509346 3.2:+54791019 MS.gene03975:CDS
TGCTTCGCTTGATAAAGCTC+TGG 0.511329 3.2:-54796424 None:intergenic
TGAGGTAGAATCTGGAAGCT+TGG 0.511466 3.2:-54791904 None:intergenic
TCATCGATACAATCTTCAAA+AGG 0.511992 3.2:+54796263 MS.gene03975:CDS
GCTCTGGCTCCACTTCGAAA+TGG 0.512667 3.2:-54796408 None:intergenic
TCAACTGCAATGCCATAATC+CGG 0.513945 3.2:+54796757 MS.gene03975:CDS
ATTGAGTTCATCACCGCGGA+TGG 0.514897 3.2:-54794005 None:intergenic
GCTTTATTGAGAGCAATAGC+GGG 0.524886 3.2:+54793885 MS.gene03975:CDS
CCTCATTCTTTATGTCAGGT+AGG 0.525459 3.2:-54795545 None:intergenic
TATTGCTCTCAATAAAGCTC+TGG 0.525656 3.2:-54793880 None:intergenic
CACATTTGAATCGGAAAGGT+CGG 0.526730 3.2:-54796333 None:intergenic
ACAATCTTCAAAAGGAATGC+TGG 0.527301 3.2:+54796271 MS.gene03975:CDS
GAGTGGATCACAACAATTCA+GGG 0.527448 3.2:+54793835 MS.gene03975:CDS
AATCTGTTGCTCGGCATCTG+AGG 0.528491 3.2:-54791456 None:intergenic
TTACTCAGCATCTGAAGTGT+AGG 0.528976 3.2:-54796101 None:intergenic
CACATGGTGTTCTTGAGTCC+GGG 0.529152 3.2:+54791148 MS.gene03975:CDS
GTCCAAGGCTGCATCGATGA+AGG 0.529170 3.2:-54791357 None:intergenic
GTGAATCCTACTAACCTTGA+AGG 0.531036 3.2:+54791675 MS.gene03975:CDS
GATGGATTATTAAGATATGA+AGG 0.531625 3.2:+54792044 MS.gene03975:CDS
AAGGATATATCTGAAGTTGT+TGG 0.532786 3.2:-54791755 None:intergenic
CTTTCCCCATGATGAGCAAA+GGG 0.533381 3.2:-54791024 None:intergenic
TTGGTACTCCACTGATAGAA+AGG 0.535177 3.2:+54796520 MS.gene03975:CDS
TTGGGTTAGCTCACTTGTGA+AGG 0.535289 3.2:+54796685 MS.gene03975:CDS
TATGATATCAATCTGTTGCT+CGG 0.538210 3.2:-54791465 None:intergenic
AGTTCTGGCTCTGCCTCGAA+AGG 0.544056 3.2:-54791854 None:intergenic
GAGATAATACTCATCTGGAC+AGG 0.546498 3.2:+54791589 MS.gene03975:CDS
GCTCTGGCTCCGTTTCGAAA+AGG 0.548920 3.2:-54793864 None:intergenic
TAACCACATTAGAATTGGTA+AGG 0.551193 3.2:-54791782 None:intergenic
GAATCCATTGCAGAAGCACT+TGG 0.552767 3.2:-54795951 None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG 0.552789 3.2:-54791449 None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG 0.552789 3.2:-54791539 None:intergenic
TTTGAATTGGAAAGATCAGA+AGG 0.554204 3.2:-54793809 None:intergenic
TGATACCCCTTCATTGCTGT+CGG 0.556420 3.2:-54791723 None:intergenic
ATTTCCCCAGAATGAGCAAA+GGG 0.558937 3.2:-54795654 None:intergenic
AGCTTTATTGAGAGCAATAG+CGG 0.562255 3.2:+54793884 MS.gene03975:CDS
AGAATGGATCATGCAGTAGA+GGG 0.565871 3.2:+54795736 MS.gene03975:CDS
GCAGTATTCAATCTGTTGCT+CGG 0.567984 3.2:-54791555 None:intergenic
TCACCTTACCAATTCTAATG+TGG 0.568314 3.2:+54791779 MS.gene03975:CDS
CACTAGCAACACTTCAACAA+TGG 0.568642 3.2:+54791995 MS.gene03975:CDS
AAACATTGCTAGTATCGTCT+AGG 0.570465 3.2:-54796604 None:intergenic
TTAGAATTGGTAAGGTGAGA+AGG 0.571244 3.2:-54791774 None:intergenic
CTTTCCAATTCAAATGTGAG+TGG 0.571592 3.2:+54793818 MS.gene03975:CDS
GATATTGCAGACGGTGTCCA+AGG 0.573927 3.2:-54791372 None:intergenic
CCCCTGATGAAAATTTAGAC+TGG 0.574361 3.2:+54793981 MS.gene03975:CDS
CAATGACTAGTGCAGCAGCT+TGG 0.576071 3.2:+54794872 MS.gene03975:CDS
CCAATCTACCTTTCTATCAG+TGG 0.576349 3.2:-54796528 None:intergenic
GAAGTATGAAGAAAGACTAT+CGG 0.576789 3.2:+54795511 MS.gene03975:CDS
GATGTTACAGACGGAGTCCA+AGG 0.577828 3.2:-54796023 None:intergenic
ATGGCAACTAAGGTAGCAGA+TGG 0.578164 3.2:-54793929 None:intergenic
AAACAATGCAAAGGAAGAAG+TGG 0.578510 3.2:-54794953 None:intergenic
GCTTTCCCCATGATGAGCAA+AGG 0.578685 3.2:-54791025 None:intergenic
CAATGATAGAAGGGTCAAGT+AGG 0.578738 3.2:+54791643 MS.gene03975:CDS
TACTCAGCATCTGAAGTGTA+GGG 0.580760 3.2:-54796100 None:intergenic
CCTACCTGACATAAAGAATG+AGG 0.581456 3.2:+54795545 MS.gene03975:CDS
GGGATAATGCTCCTCATGAG+TGG 0.582183 3.2:+54795622 MS.gene03975:CDS
GTATACATTGCAGAAGCACT+TGG 0.582995 3.2:-54791324 None:intergenic
CTTCTTTGCTCACAAACCTG+AGG 0.585534 3.2:+54791236 MS.gene03975:CDS
GATTGGATCACCACAACTCA+AGG 0.586241 3.2:+54796355 MS.gene03975:CDS
AATTCAACTGAGGTGGCAGA+AGG 0.587216 3.2:-54796473 None:intergenic
CAATCTCCGACAGCAATGAA+GGG 0.587316 3.2:+54791717 MS.gene03975:CDS
TGCCGAATCCAATGATAGAA+GGG 0.587494 3.2:+54791634 MS.gene03975:CDS
GTACTAATCTGAGTCGGAGT+CGG 0.588992 3.2:-54791510 None:intergenic
GTTCTGGCTCTGCCTCGAAA+GGG 0.592388 3.2:-54791853 None:intergenic
CATGCACAATTGCTCTGGAT+AGG 0.592690 3.2:-54796792 None:intergenic
CTGAGTCGGAGTCGGCCACA+TGG 0.594746 3.2:-54791412 None:intergenic
CAATCACATTTGAATCGGAA+AGG 0.598213 3.2:-54796337 None:intergenic
GTACGATTCTGAGTCGGAGT+CGG 0.598804 3.2:-54791420 None:intergenic
ATCCTGCTCAATACAGAACA+AGG 0.601756 3.2:+54795802 MS.gene03975:CDS
CATTCTGAAATTCATAACAA+TGG 0.603085 3.2:-54795719 None:intergenic
GAACTGGTACTAGCATTCAA+CGG 0.603434 3.2:-54791267 None:intergenic
AAACTTGGAAAACAATGCAA+AGG 0.604560 3.2:-54794962 None:intergenic
TCAAATGTTGATGATCAGGA+TGG 0.604566 3.2:+54792026 MS.gene03975:CDS
TCTGTAACATCATCTCATGC+AGG 0.606078 3.2:+54796035 MS.gene03975:CDS
CTGAGTCGGAGTCGGCCACA+TGG 0.607724 3.2:-54791502 None:intergenic
AAGGTAGATTGGTCTATCCC+CGG 0.610542 3.2:+54796539 MS.gene03975:CDS
AGAGAAAGTAGAAGGCTCCA+TGG 0.611618 3.2:-54793948 None:intergenic
GGACATTCTGTCCACTCATG+AGG 0.613065 3.2:-54795633 None:intergenic
ATGTCCCTTTGCTCATTCTG+GGG 0.613840 3.2:+54795650 MS.gene03975:CDS
TCTGCAATATCATATCCTGC+AGG 0.614316 3.2:+54791384 MS.gene03975:CDS
CTTCTTTGCTCACAAACCCG+AGG 0.614714 3.2:+54795863 MS.gene03975:CDS
TACTAGCAATGTTTCAACAA+TGG 0.618393 3.2:+54796613 MS.gene03975:CDS
ACTGTAGTACTAATCTGAGT+CGG 0.618849 3.2:-54791516 None:intergenic
ACTGTAGTATGAATCTGAGT+CGG 0.620110 3.2:-54796077 None:intergenic
AGGCTCTAATTCAACTGAGG+TGG 0.620796 3.2:-54796480 None:intergenic
GACACAAATCAGCAACTTTG+GGG 0.625154 3.2:+54793782 MS.gene03975:CDS
ACATTCAAAGTGCGGCATTG+CGG 0.631811 3.2:+54790976 MS.gene03975:CDS
TGATGTATACATTCAAAGTG+CGG 0.634386 3.2:+54790968 MS.gene03975:CDS
AATTTCCCCAGAATGAGCAA+AGG 0.634761 3.2:-54795655 None:intergenic
CTTTATCGAGAGCAGCAGCA+TGG 0.636540 3.2:+54791875 MS.gene03975:CDS
AGTGGAGTACCAATCAGAGA+AGG 0.636735 3.2:-54796510 None:intergenic
TTTGAATATAATGTATGTGA+AGG 0.637611 3.2:-54791297 None:intergenic
GAAGATTGTATCAAAGAAGA+CGG 0.638209 3.2:-54795990 None:intergenic
GAGAAGCAGAAACAACATGT+AGG 0.638851 3.2:+54795480 MS.gene03975:CDS
GCATGAGATGATGTTACAGA+CGG 0.640776 3.2:-54796032 None:intergenic
GCAGGATATGATATTGCAGA+CGG 0.643899 3.2:-54791381 None:intergenic
ATATAGATCATGCAGTAAAG+GGG 0.646866 3.2:+54791110 MS.gene03975:CDS
GAAGGATGATGATCCAACAT+TGG 0.647091 3.2:+54796703 MS.gene03975:CDS
CTGAGTCGGAGTCTGCCACA+TGG 0.648294 3.2:-54796063 None:intergenic
TGAAGGCTCCAATGCAACTG+AGG 0.649434 3.2:-54791922 None:intergenic
ATGTCCCTTTGCTCATCATG+GGG 0.650802 3.2:+54791020 MS.gene03975:CDS
AAGCAGAAACAACATGTAGG+TGG 0.652560 3.2:+54795483 MS.gene03975:CDS
ACTGTAGTACGATTCTGAGT+CGG 0.653294 3.2:-54791426 None:intergenic
GATATGATGCCATTTCGAAG+TGG 0.655473 3.2:+54796399 MS.gene03975:CDS
GTATTGAGCAGGATGAAGCA+AGG 0.657751 3.2:-54795793 None:intergenic
AATCTCCGACAGCAATGAAG+GGG 0.667800 3.2:+54791718 MS.gene03975:CDS
GTATCGACTAGGATGCAGCC+CGG 0.668994 3.2:-54791166 None:intergenic
AATTTAGACTGGTCCATCCG+CGG 0.672142 3.2:+54793992 MS.gene03975:CDS
ACTGCACCGAAACTTGGTGA+AGG 0.673288 3.2:-54794990 None:intergenic
GAATGGATCATGCAGTAGAG+GGG 0.673342 3.2:+54795737 MS.gene03975:CDS
ATTTCATTGAGTTTATCACC+GGG 0.674570 3.2:-54796557 None:intergenic
AGCGTTGTTCTGTATCGACT+AGG 0.678911 3.2:-54791177 None:intergenic
CTTTATCAAGCGAAGCAGCG+TGG 0.679886 3.2:+54796430 MS.gene03975:CDS
GTAACATCATCTCATGCAGG+AGG 0.680207 3.2:+54796038 MS.gene03975:CDS
CTTTATTGAGAGCAATAGCG+GGG 0.684685 3.2:+54793886 MS.gene03975:CDS
AATGGATCAACCTTGAGTTG+TGG 0.691978 3.2:-54796365 None:intergenic
AGAAGGCTCTAATTCAACTG+AGG 0.697808 3.2:-54796483 None:intergenic
GATACATGTCAATATTCACA+TGG 0.715825 3.2:+54795759 MS.gene03975:CDS
CCTTACGAAACTCAGGACAA+GGG 0.724349 3.2:+54793760 MS.gene03975:intron
TTTCATTGAGTTTATCACCG+GGG 0.737072 3.2:-54796556 None:intergenic
CTCATGCAGGAGGAACCATG+TGG 0.757875 3.2:+54796048 MS.gene03975:CDS
GATGAATGTCAATATGCACA+TGG 0.762142 3.2:+54791132 MS.gene03975:CDS
ATCCTGCAGGAAGAACCATG+TGG 0.814597 3.2:+54791397 MS.gene03975:CDS
ATCCTGCAGAAAGAACCATG+TGG 0.834161 3.2:+54791487 MS.gene03975:CDS
AATGTGAGCCAAGAACTGTG+TGG 0.868069 3.2:+54796302 MS.gene03975:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGATCTTAATTAAATAT+AGG + chr3.2:54794317-54794336 MS.gene03975:intron 10.0%
!! AATAACAAAACAAAGAATTA+AGG - chr3.2:54792288-54792307 None:intergenic 15.0%
!! ATAACAAAACAAAGAATTAA+GGG - chr3.2:54792287-54792306 None:intergenic 15.0%
!! GAAAAAAAAAAAAAACAAAG+TGG - chr3.2:54793164-54793183 None:intergenic 15.0%
!! TAGAGATATTCATTATATTT+GGG + chr3.2:54792210-54792229 MS.gene03975:intron 15.0%
!! TATATAATACAGATGAATTT+AGG + chr3.2:54795568-54795587 MS.gene03975:CDS 15.0%
!! TCATATCTTGAATTAAAAAA+TGG - chr3.2:54791831-54791850 None:intergenic 15.0%
!! TTAGAGATATTCATTATATT+TGG + chr3.2:54792209-54792228 MS.gene03975:intron 15.0%
!! TTATATTGAAGAAAGAAATT+CGG - chr3.2:54794685-54794704 None:intergenic 15.0%
!! TTTAAACCTTATGAATAAAA+TGG - chr3.2:54792863-54792882 None:intergenic 15.0%
!! AAAGAATTAAGGGAAAAAAA+TGG - chr3.2:54792277-54792296 None:intergenic 20.0%
!! AAGATATAGAGAGAAAAAAA+AGG - chr3.2:54794456-54794475 None:intergenic 20.0%
!! AATAATATTTCTTTGGATCA+CGG - chr3.2:54795689-54795708 None:intergenic 20.0%
!! AATTCTGTATAATAATAGAG+AGG + chr3.2:54793429-54793448 MS.gene03975:intron 20.0%
!! ATCTATGAAACAATAATTCA+AGG - chr3.2:54792425-54792444 None:intergenic 20.0%
!! ATGTTAATACAGATTTAACA+AGG - chr3.2:54794491-54794510 None:intergenic 20.0%
!! ATTATTAAGATATGAAGGTA+TGG + chr3.2:54792049-54792068 MS.gene03975:intron 20.0%
!! CAACTGTAATAATATTTCTT+TGG - chr3.2:54795696-54795715 None:intergenic 20.0%
!! CTAAAGTTAAAAAAAATCAC+AGG - chr3.2:54792193-54792212 None:intergenic 20.0%
!! TAAACATTTGCAAATTTCTT+GGG + chr3.2:54793301-54793320 MS.gene03975:intron 20.0%
!! TAATATGATACTAAACAGAA+AGG - chr3.2:54793382-54793401 None:intergenic 20.0%
!! TCATATCTTGAATTCATAAA+TGG - chr3.2:54796386-54796405 None:intergenic 20.0%
!! TGAATAAAATGGTATAAGAT+TGG - chr3.2:54792852-54792871 None:intergenic 20.0%
!! TTAAACATTTGCAAATTTCT+TGG + chr3.2:54793300-54793319 MS.gene03975:intron 20.0%
!! TTTGAATATAATGTATGTGA+AGG - chr3.2:54791300-54791319 None:intergenic 20.0%
!!! AAAAAAGAAATGTGTTTTCT+TGG + chr3.2:54795155-54795174 MS.gene03975:intron 20.0%
!!! ATTTCTGAAATTCATTACAA+TGG - chr3.2:54791092-54791111 None:intergenic 20.0%
!!! CTTATACCATTTTATTCATA+AGG + chr3.2:54792854-54792873 MS.gene03975:intron 20.0%
!!! TGTATTTTTCTTATTCTTCA+CGG + chr3.2:54795054-54795073 MS.gene03975:intron 20.0%
!!! TTTCTGAAATTCATTACAAT+GGG - chr3.2:54791091-54791110 None:intergenic 20.0%
! AAAGAAGAACTTACAGAATA+AGG - chr3.2:54795018-54795037 None:intergenic 25.0%
! AAATATAGATCATGCAGTAA+AGG + chr3.2:54791108-54791127 MS.gene03975:CDS 25.0%
! AATAACATGTATAACTGCTT+CGG - chr3.2:54792168-54792187 None:intergenic 25.0%
! AATATAGATCATGCAGTAAA+GGG + chr3.2:54791109-54791128 MS.gene03975:CDS 25.0%
! CATCTGTAATTATATTGCTT+CGG - chr3.2:54791066-54791085 None:intergenic 25.0%
! CATTGTTATGAATTTCAGAA+TGG + chr3.2:54795720-54795739 MS.gene03975:CDS 25.0%
! CGTGATAGAAAATTAGAATT+GGG + chr3.2:54791969-54791988 MS.gene03975:CDS 25.0%
! GAATATGCATATGCTTATAA+TGG + chr3.2:54792339-54792358 MS.gene03975:intron 25.0%
! GAATTATTCATTATTAAGCC+AGG + chr3.2:54796658-54796677 MS.gene03975:CDS 25.0%
! TACTACAAGGATATAGTATA+TGG + chr3.2:54794428-54794447 MS.gene03975:intron 25.0%
! TAGTTACAAACCATAATTCA+AGG - chr3.2:54792650-54792669 None:intergenic 25.0%
! TATCCTCAAAATGCAAATTA+AGG + chr3.2:54794573-54794592 MS.gene03975:intron 25.0%
! TCTAATGTTAACTTTGACAT+TGG + chr3.2:54794186-54794205 MS.gene03975:intron 25.0%
! TTGATTAGGGAAAATGAATA+GGG + chr3.2:54793520-54793539 MS.gene03975:intron 25.0%
! TTTGATTAGGGAAAATGAAT+AGG + chr3.2:54793519-54793538 MS.gene03975:intron 25.0%
!! ACTTTTCTTATTCTTCTTGA+TGG + chr3.2:54795243-54795262 MS.gene03975:intron 25.0%
!! CAATTCTAATTTTCTATCAC+GGG - chr3.2:54791970-54791989 None:intergenic 25.0%
!! CCAATTCTAATTTTCTATCA+CGG - chr3.2:54791971-54791990 None:intergenic 25.0%
!! GAGGTGTATTTTGTATATAT+TGG - chr3.2:54794735-54794754 None:intergenic 25.0%
!! GTAACATTTTGCAGAAAATA+TGG + chr3.2:54794339-54794358 MS.gene03975:intron 25.0%
!! TTGTCAAACTAGTTTGATTA+GGG + chr3.2:54793507-54793526 MS.gene03975:intron 25.0%
!! TTTGTCAAACTAGTTTGATT+AGG + chr3.2:54793506-54793525 MS.gene03975:intron 25.0%
!!! AATCCTTAATTTGCATTTTG+AGG - chr3.2:54794579-54794598 None:intergenic 25.0%
!!! ACATGTTTTAACCAAATGAA+GGG - chr3.2:54792389-54792408 None:intergenic 25.0%
!!! CATTCTGAAATTCATAACAA+TGG - chr3.2:54795722-54795741 None:intergenic 25.0%
!!! GATGGATTATTAAGATATGA+AGG + chr3.2:54792044-54792063 MS.gene03975:CDS 25.0%
!!! TACATGTTTTAACCAAATGA+AGG - chr3.2:54792390-54792409 None:intergenic 25.0%
!!! TACCATTCTCTTTTTTTGAA+TGG + chr3.2:54792757-54792776 MS.gene03975:intron 25.0%
!!! TTTTTTCTTTTCTAGTACGA+AGG + chr3.2:54793177-54793196 MS.gene03975:intron 25.0%
AAAATGTCTTCATGGTTAGT+AGG - chr3.2:54796239-54796258 None:intergenic 30.0%
AAACAGAAAGGAATCAGATA+GGG - chr3.2:54793370-54793389 None:intergenic 30.0%
AAACTTGGAAAACAATGCAA+AGG - chr3.2:54794965-54794984 None:intergenic 30.0%
AATAATTCAAGGCGTATGTT+TGG - chr3.2:54792414-54792433 None:intergenic 30.0%
AATCAAAGTTACTCTACATG+AGG - chr3.2:54794754-54794773 None:intergenic 30.0%
AATTATATTGCTTCGGATCA+CGG - chr3.2:54791059-54791078 None:intergenic 30.0%
ACGCGAAAAGAAAATGATTT+AGG - chr3.2:54793055-54793074 None:intergenic 30.0%
AGCATCTGACAAAATGATTT+AGG - chr3.2:54792998-54793017 None:intergenic 30.0%
ATATAGATCATGCAGTAAAG+GGG + chr3.2:54791110-54791129 MS.gene03975:CDS 30.0%
ATGACGACATCTTATTCATT+CGG + chr3.2:54796578-54796597 MS.gene03975:CDS 30.0%
ATTATTAAGCCAGGAATCTT+GGG + chr3.2:54796667-54796686 MS.gene03975:CDS 30.0%
ATTTCATTGAGTTTATCACC+GGG - chr3.2:54796560-54796579 None:intergenic 30.0%
CAAAACCGTAAAACAACAAA+AGG + chr3.2:54794915-54794934 MS.gene03975:CDS 30.0%
CAACTTCAACATTACAATGT+TGG - chr3.2:54792101-54792120 None:intergenic 30.0%
CAATGATAGAAGACTCAAAT+AGG + chr3.2:54796198-54796217 MS.gene03975:CDS 30.0%
CATTTCATTGAGTTTATCAC+CGG - chr3.2:54796561-54796580 None:intergenic 30.0%
CCGTGATAGAAAATTAGAAT+TGG + chr3.2:54791968-54791987 MS.gene03975:CDS 30.0%
CTATTTGAGTCTTCTATCAT+TGG - chr3.2:54796200-54796219 None:intergenic 30.0%
CTGTATATATATCTCGTATC+AGG - chr3.2:54794624-54794643 None:intergenic 30.0%
GAAGATTGTATCAAAGAAGA+CGG - chr3.2:54795993-54796012 None:intergenic 30.0%
GAAGTATGAAGAAAGACTAT+CGG + chr3.2:54795511-54795530 MS.gene03975:CDS 30.0%
GATACATGTCAATATTCACA+TGG + chr3.2:54795759-54795778 MS.gene03975:CDS 30.0%
GTAAGGAATCATACAGTAAA+GGG - chr3.2:54793746-54793765 None:intergenic 30.0%
GTCCATTCAAAAAAAGAGAA+TGG - chr3.2:54792762-54792781 None:intergenic 30.0%
GTGATGAACTCAATAAAATG+AGG + chr3.2:54794014-54794033 MS.gene03975:intron 30.0%
TAAACAGAAAGGAATCAGAT+AGG - chr3.2:54793371-54793390 None:intergenic 30.0%
TAACCACATTAGAATTGGTA+AGG - chr3.2:54791785-54791804 None:intergenic 30.0%
TAAGGAATCATACAGTAAAG+GGG - chr3.2:54793745-54793764 None:intergenic 30.0%
TACTAGCAATGTTTCAACAA+TGG + chr3.2:54796613-54796632 MS.gene03975:CDS 30.0%
TATACCTCATTCTTTATGTC+AGG - chr3.2:54795552-54795571 None:intergenic 30.0%
TATGATATCAATCTGTTGCT+CGG - chr3.2:54791468-54791487 None:intergenic 30.0%
TATGGTTAATGAACTTGTGA+AGG + chr3.2:54792067-54792086 MS.gene03975:intron 30.0%
TCAACTAACTCTATGAAATC+TGG + chr3.2:54794792-54794811 MS.gene03975:intron 30.0%
TCATCGATACAATCTTCAAA+AGG + chr3.2:54796263-54796282 MS.gene03975:CDS 30.0%
TGATCAATTGTTGAATGAAG+TGG - chr3.2:54792942-54792961 None:intergenic 30.0%
TGATCCAATCACATTTGAAT+CGG - chr3.2:54796345-54796364 None:intergenic 30.0%
TGATCTAACCACATTAGAAT+TGG - chr3.2:54791790-54791809 None:intergenic 30.0%
TGATGTATACATTCAAAGTG+CGG + chr3.2:54790968-54790987 MS.gene03975:CDS 30.0%
TGTGTTTATTTCCAAAAGAG+TGG - chr3.2:54792733-54792752 None:intergenic 30.0%
TTACAAAATCATCAATCACC+AGG - chr3.2:54795412-54795431 None:intergenic 30.0%
TTTCATAGAGTTAGTTGAGT+TGG - chr3.2:54794790-54794809 None:intergenic 30.0%
TTTGAATTGGAAAGATCAGA+AGG - chr3.2:54793812-54793831 None:intergenic 30.0%
! AAGGATATATCTGAAGTTGT+TGG - chr3.2:54791758-54791777 None:intergenic 30.0%
! ACCAGTCTAAATTTTCATCA+GGG - chr3.2:54793985-54794004 None:intergenic 30.0%
! ACTAACCATGAAGACATTTT+CGG + chr3.2:54796239-54796258 MS.gene03975:CDS 30.0%
! ATATGTTTTCTCTTTCACTC+TGG + chr3.2:54793085-54793104 MS.gene03975:intron 30.0%
! CTTGATGGTTCATTAAGTTT+CGG + chr3.2:54795258-54795277 MS.gene03975:intron 30.0%
! GAGATTACAATGTGTTTTCT+TGG + chr3.2:54795311-54795330 MS.gene03975:intron 30.0%
! GTGTCGATAATACAAAAGTT+AGG + chr3.2:54794366-54794385 MS.gene03975:intron 30.0%
! TTAGTAAAGATCGCATCTTT+TGG - chr3.2:54795097-54795116 None:intergenic 30.0%
! TTTGAGTTTGATGTAGTTGA+AGG - chr3.2:54795927-54795946 None:intergenic 30.0%
!! AACAACTTGTTACTACTACA+AGG + chr3.2:54794415-54794434 MS.gene03975:intron 30.0%
!! TACATCAAATGTTGATGATC+AGG + chr3.2:54792022-54792041 MS.gene03975:CDS 30.0%
!!! TTCAGTTTCGCTTTTTATCA+AGG + chr3.2:54792686-54792705 MS.gene03975:intron 30.0%
!!! TTTGTTGTTTTACGGTTTTG+AGG - chr3.2:54794915-54794934 None:intergenic 30.0%
AAACAATGCAAAGGAAGAAG+TGG - chr3.2:54794956-54794975 None:intergenic 35.0%
AAACATTGCTAGTATCGTCT+AGG - chr3.2:54796607-54796626 None:intergenic 35.0%
AAAGGAATCAGATAGGGAAA+TGG - chr3.2:54793364-54793383 None:intergenic 35.0%
AAATAGCCTTCAAGGTTAGT+AGG - chr3.2:54791684-54791703 None:intergenic 35.0%
AAGTTGCAAATAGTAGCTTC+TGG + chr3.2:54792560-54792579 MS.gene03975:intron 35.0%
AATCAGATAGGGAAATGGAA+AGG - chr3.2:54793359-54793378 None:intergenic 35.0%
ACAATCTTCAAAAGGAATGC+TGG + chr3.2:54796271-54796290 MS.gene03975:CDS 35.0%
ACTGTAGTACTAATCTGAGT+CGG - chr3.2:54791519-54791538 None:intergenic 35.0%
ACTGTAGTATGAATCTGAGT+CGG - chr3.2:54796080-54796099 None:intergenic 35.0%
AGAACAACGCTTTGCAATAA+TGG + chr3.2:54791189-54791208 MS.gene03975:CDS 35.0%
AGAATATGCTTTCTCTTTCC+TGG + chr3.2:54795391-54795410 MS.gene03975:intron 35.0%
ATCCAGATGTTGAAGATCAA+CGG + chr3.2:54794087-54794106 MS.gene03975:intron 35.0%
ATCCTGGTCAATATAGAACA+AGG - chr3.2:54793680-54793699 None:intergenic 35.0%
ATGAACCAAAATAGCCTTCA+AGG - chr3.2:54791692-54791711 None:intergenic 35.0%
ATTGCGGTTATGTTCATGAT+TGG + chr3.2:54790992-54791011 MS.gene03975:CDS 35.0%
CAAACATACGCCTTGAATTA+TGG + chr3.2:54792412-54792431 MS.gene03975:intron 35.0%
CAAAGTGAAACTTTGCTCAT+GGG + chr3.2:54795602-54795621 MS.gene03975:CDS 35.0%
CAATCACATTTGAATCGGAA+AGG - chr3.2:54796340-54796359 None:intergenic 35.0%
CATAATTCAAGGCGTATGTT+TGG - chr3.2:54792639-54792658 None:intergenic 35.0%
CATTATTAAGCCAGGAATCT+TGG + chr3.2:54796666-54796685 MS.gene03975:CDS 35.0%
CGTAAGGAATCATACAGTAA+AGG - chr3.2:54793747-54793766 None:intergenic 35.0%
CTCATTCTTTATGTCAGGTA+GGG - chr3.2:54795547-54795566 None:intergenic 35.0%
CTTTCCAATTCAAATGTGAG+TGG + chr3.2:54793818-54793837 MS.gene03975:CDS 35.0%
CTTTCCGATTCAAATGTGAT+TGG + chr3.2:54796338-54796357 MS.gene03975:CDS 35.0%
GATGAATGTCAATATGCACA+TGG + chr3.2:54791132-54791151 MS.gene03975:CDS 35.0%
TAAACTTCAGTGCCATAATC+CGG + chr3.2:54792125-54792144 MS.gene03975:intron 35.0%
TAGTCTTTCTTCATACTTCG+AGG - chr3.2:54795510-54795529 None:intergenic 35.0%
TATAACATGCACAATTGCTC+TGG - chr3.2:54796800-54796819 None:intergenic 35.0%
TATGATTCCTTACGAAACTC+AGG + chr3.2:54793753-54793772 MS.gene03975:intron 35.0%
TATTGCTCTCAATAAAGCTC+TGG - chr3.2:54793883-54793902 None:intergenic 35.0%
TCAAAGTGAAACTTTGCTCA+TGG + chr3.2:54795601-54795620 MS.gene03975:CDS 35.0%
TCACCTTACCAATTCTAATG+TGG + chr3.2:54791779-54791798 MS.gene03975:CDS 35.0%
TGATCCACTCACATTTGAAT+TGG - chr3.2:54793825-54793844 None:intergenic 35.0%
TGCGTGTATGTTTGAATATG+CGG + chr3.2:54792495-54792514 MS.gene03975:intron 35.0%
TGCTAGAGATAATACTCATC+TGG + chr3.2:54791584-54791603 MS.gene03975:CDS 35.0%
TGTATGTTTGAATATGCGGT+GGG + chr3.2:54792499-54792518 MS.gene03975:intron 35.0%
TGTTGATCAGATTCCAATGT+TGG - chr3.2:54796719-54796738 None:intergenic 35.0%
TTAGAATTGGTAAGGTGAGA+AGG - chr3.2:54791777-54791796 None:intergenic 35.0%
TTCAGCCAAAGGTTATACTA+TGG + chr3.2:54793585-54793604 MS.gene03975:CDS 35.0%
TTCGACCATAGTATAACCTT+TGG - chr3.2:54793593-54793612 None:intergenic 35.0%
TTTCATTGAGTTTATCACCG+GGG - chr3.2:54796559-54796578 None:intergenic 35.0%
TTTGCCAGAGAAATTGTACA+TGG + chr3.2:54794139-54794158 MS.gene03975:intron 35.0%
! AATCATTTTGTCAGATGCTG+AGG + chr3.2:54792999-54793018 MS.gene03975:intron 35.0%
! ACTAACCTTGAAGGCTATTT+TGG + chr3.2:54791684-54791703 MS.gene03975:CDS 35.0%
! CCAGTCTAAATTTTCATCAG+GGG - chr3.2:54793984-54794003 None:intergenic 35.0%
! CTAACCATGAAGACATTTTC+GGG + chr3.2:54796240-54796259 MS.gene03975:CDS 35.0%
! GACCAGTCTAAATTTTCATC+AGG - chr3.2:54793986-54794005 None:intergenic 35.0%
! GTATCAAACTACCACTCTTT+TGG + chr3.2:54792719-54792738 MS.gene03975:intron 35.0%
! TTTTATTGAGTTCATCACCG+CGG - chr3.2:54794012-54794031 None:intergenic 35.0%
!! AGCTTTATTGAGAGCAATAG+CGG + chr3.2:54793884-54793903 MS.gene03975:CDS 35.0%
!! GACGCTAGTTTAGTGATTTT+GGG + chr3.2:54792779-54792798 MS.gene03975:intron 35.0%
!! TCAAATGTTGATGATCAGGA+TGG + chr3.2:54792026-54792045 MS.gene03975:CDS 35.0%
!! TCCCTGAAAAAGTGTTTCTT+GGG + chr3.2:54795346-54795365 MS.gene03975:intron 35.0%
!!! CAGTGCCTTTTGTTGTTTTA+CGG - chr3.2:54794923-54794942 None:intergenic 35.0%
!!! TACAGCTTGTTTTTGCTGTT+TGG + chr3.2:54793114-54793133 MS.gene03975:intron 35.0%
!!! TCCCAAGAAACACTTTTTCA+GGG - chr3.2:54795350-54795369 None:intergenic 35.0%
!!! TTCAGAACACACACTTTTTC+AGG - chr3.2:54795195-54795214 None:intergenic 35.0%
AAATGTCCCTTTGCTCATCA+TGG + chr3.2:54791018-54791037 MS.gene03975:CDS 40.0%
AACCTTGTTCTGTATTGAGC+AGG - chr3.2:54795807-54795826 None:intergenic 40.0%
AACTGGTACTAGCATTCAAC+GGG - chr3.2:54791269-54791288 None:intergenic 40.0%
AACTGGTATAAGCCTTCAAC+AGG - chr3.2:54795896-54795915 None:intergenic 40.0%
AAGCAGAAACAACATGTAGG+TGG + chr3.2:54795483-54795502 MS.gene03975:CDS 40.0%
AATGCAACTGAGGTAGAATC+TGG - chr3.2:54791915-54791934 None:intergenic 40.0%
AATGTCCCTTTGCTCATCAT+GGG + chr3.2:54791019-54791038 MS.gene03975:CDS 40.0%
AATGTCCCTTTGCTCATTCT+GGG + chr3.2:54795649-54795668 MS.gene03975:CDS 40.0%
AATTTCCCCAGAATGAGCAA+AGG - chr3.2:54795658-54795677 None:intergenic 40.0%
ACTGTAGTACGATTCTGAGT+CGG - chr3.2:54791429-54791448 None:intergenic 40.0%
AGAATGGATCATGCAGTAGA+GGG + chr3.2:54795736-54795755 MS.gene03975:CDS 40.0%
AGATTCTACCTCAGTTGCAT+TGG + chr3.2:54791914-54791933 MS.gene03975:CDS 40.0%
AGCCTTCTACTTTCTCTGAT+TGG + chr3.2:54793954-54793973 MS.gene03975:CDS 40.0%
ATCCTGCTCAATACAGAACA+AGG + chr3.2:54795802-54795821 MS.gene03975:CDS 40.0%
ATGACAACTCACCCTTCATT+TGG + chr3.2:54792375-54792394 MS.gene03975:intron 40.0%
ATGACCCGAAAATGTCTTCA+TGG - chr3.2:54796247-54796266 None:intergenic 40.0%
ATGCCGAATCCAATGATAGA+AGG + chr3.2:54791633-54791652 MS.gene03975:CDS 40.0%
ATTTCCCCAGAATGAGCAAA+GGG - chr3.2:54795657-54795676 None:intergenic 40.0%
CAATGATAGAAGGGTCAAGT+AGG + chr3.2:54791643-54791662 MS.gene03975:CDS 40.0%
CACATTTGAATCGGAAAGGT+CGG - chr3.2:54796336-54796355 None:intergenic 40.0%
CACTAGCAACACTTCAACAA+TGG + chr3.2:54791995-54792014 MS.gene03975:CDS 40.0%
CAGAACCAAGATTGCCTTAA+GGG + chr3.2:54795441-54795460 MS.gene03975:intron 40.0%
CCAATCTACCTTTCTATCAG+TGG - chr3.2:54796531-54796550 None:intergenic 40.0%
CCACTGATAGAAAGGTAGAT+TGG + chr3.2:54796528-54796547 MS.gene03975:CDS 40.0%
CCCCTGATGAAAATTTAGAC+TGG + chr3.2:54793981-54794000 MS.gene03975:CDS 40.0%
CCTACCTGACATAAAGAATG+AGG + chr3.2:54795545-54795564 MS.gene03975:CDS 40.0%
CCTCATTCTTTATGTCAGGT+AGG - chr3.2:54795548-54795567 None:intergenic 40.0%
CCTTCTACTTTCTCTGATTG+GGG + chr3.2:54793956-54793975 MS.gene03975:CDS 40.0%
CTACTTGACCCTTCTATCAT+TGG - chr3.2:54791645-54791664 None:intergenic 40.0%
CTTTATTGAGAGCAATAGCG+GGG + chr3.2:54793886-54793905 MS.gene03975:CDS 40.0%
GAACTGGTACTAGCATTCAA+CGG - chr3.2:54791270-54791289 None:intergenic 40.0%
GAAGGATGATGATCCAACAT+TGG + chr3.2:54796703-54796722 MS.gene03975:CDS 40.0%
GACACAAATCAGCAACTTTG+GGG + chr3.2:54793782-54793801 MS.gene03975:CDS 40.0%
GACCCTTCTATCATTGGATT+CGG - chr3.2:54791639-54791658 None:intergenic 40.0%
GAGAAGCAGAAACAACATGT+AGG + chr3.2:54795480-54795499 MS.gene03975:CDS 40.0%
GAGATAATACTCATCTGGAC+AGG + chr3.2:54791589-54791608 MS.gene03975:CDS 40.0%
GAGTGGATCACAACAATTCA+GGG + chr3.2:54793835-54793854 MS.gene03975:CDS 40.0%
GATGCTTGTGAATATGCACA+CGG - chr3.2:54793723-54793742 None:intergenic 40.0%
GCAAACTCTTCTTGTGCAAT+AGG + chr3.2:54793638-54793657 MS.gene03975:CDS 40.0%
GCAAGTAACTACTCACAAGT+TGG - chr3.2:54792908-54792927 None:intergenic 40.0%
GCAGGATATGATATTGCAGA+CGG - chr3.2:54791384-54791403 None:intergenic 40.0%
GCAGTATTCAATCTGTTGCT+CGG - chr3.2:54791558-54791577 None:intergenic 40.0%
GCATGAGATGATGTTACAGA+CGG - chr3.2:54796035-54796054 None:intergenic 40.0%
GCCTTCTACTTTCTCTGATT+GGG + chr3.2:54793955-54793974 MS.gene03975:CDS 40.0%
GGACACAAATCAGCAACTTT+GGG + chr3.2:54793781-54793800 MS.gene03975:CDS 40.0%
GTGAATCCTACTAACCTTGA+AGG + chr3.2:54791675-54791694 MS.gene03975:CDS 40.0%
GTGTATGTTTGAATATGCGG+TGG + chr3.2:54792498-54792517 MS.gene03975:intron 40.0%
TATAACTGCTTCGGCTAAGA+TGG - chr3.2:54792159-54792178 None:intergenic 40.0%
TCAACGGCAATGCTATAATC+CGG + chr3.2:54794103-54794122 MS.gene03975:intron 40.0%
TCAACTGCAATGCCATAATC+CGG + chr3.2:54796757-54796776 MS.gene03975:CDS 40.0%
TCTGAACCTTCACCAAGTTT+CGG + chr3.2:54794984-54795003 MS.gene03975:CDS 40.0%
TCTGCAATATCATATCCTGC+AGG + chr3.2:54791384-54791403 MS.gene03975:CDS 40.0%
TCTGTAACATCATCTCATGC+AGG + chr3.2:54796035-54796054 MS.gene03975:CDS 40.0%
TGAGTGGATCACAACAATTC+AGG + chr3.2:54793834-54793853 MS.gene03975:CDS 40.0%
TGCCGAATCCAATGATAGAA+GGG + chr3.2:54791634-54791653 MS.gene03975:CDS 40.0%
TGCTCCATGTACAATTTCTC+TGG - chr3.2:54794146-54794165 None:intergenic 40.0%
TGGTTAGATCACAACAGTTC+TGG + chr3.2:54791799-54791818 MS.gene03975:CDS 40.0%
TTGGTACTCCACTGATAGAA+AGG + chr3.2:54796520-54796539 MS.gene03975:CDS 40.0%
TTGGTGAAGGTTCAGAAACT+TGG - chr3.2:54794980-54794999 None:intergenic 40.0%
! AATGGATCAACCTTGAGTTG+TGG - chr3.2:54796368-54796387 None:intergenic 40.0%
! AGAAGGCTCTAATTCAACTG+AGG - chr3.2:54796486-54796505 None:intergenic 40.0%
! GATATGATGCCATTTCGAAG+TGG + chr3.2:54796399-54796418 MS.gene03975:CDS 40.0%
! GCTTTATTGAGAGCAATAGC+GGG + chr3.2:54793885-54793904 MS.gene03975:CDS 40.0%
! GTGATATTTCGCTGCGATTT+TGG - chr3.2:54792530-54792549 None:intergenic 40.0%
! TACTCAGCATCTGAAGTGTA+GGG - chr3.2:54796103-54796122 None:intergenic 40.0%
! TTACTCAGCATCTGAAGTGT+AGG - chr3.2:54796104-54796123 None:intergenic 40.0%
! TTGCTTGAGTTTTCAGCCAA+AGG + chr3.2:54793574-54793593 MS.gene03975:CDS 40.0%
!! AGCCTTGTTCTATATTGACC+AGG + chr3.2:54793675-54793694 MS.gene03975:intron 40.0%
!! GGACGCTAGTTTAGTGATTT+TGG + chr3.2:54792778-54792797 MS.gene03975:intron 40.0%
!! GTATACATTGCAGAAGCACT+TGG - chr3.2:54791327-54791346 None:intergenic 40.0%
!! GTCCCTGAAAAAGTGTTTCT+TGG + chr3.2:54795345-54795364 MS.gene03975:intron 40.0%
!!! CACACGGTATTTTCAAGTTC+TGG - chr3.2:54793707-54793726 None:intergenic 40.0%
!!! CTCCCAAGAAACACTTTTTC+AGG - chr3.2:54795351-54795370 None:intergenic 40.0%
AAGGAAACTGCACCGAAACT+TGG - chr3.2:54794999-54795018 None:intergenic 45.0%
AATCTCCGACAGCAATGAAG+GGG + chr3.2:54791718-54791737 MS.gene03975:CDS 45.0%
AATGTGAGCCAAGAACTGTG+TGG + chr3.2:54796302-54796321 MS.gene03975:CDS 45.0%
AATTCAACTGAGGTGGCAGA+AGG - chr3.2:54796476-54796495 None:intergenic 45.0%
ACAATCTCCGACAGCAATGA+AGG + chr3.2:54791716-54791735 MS.gene03975:CDS 45.0%
ACATTCAAAGTGCGGCATTG+CGG + chr3.2:54790976-54790995 MS.gene03975:CDS 45.0%
AGAGAAAGTAGAAGGCTCCA+TGG - chr3.2:54793951-54793970 None:intergenic 45.0%
AGTTGAAGGCAAAGCAGAAC+TGG - chr3.2:54795913-54795932 None:intergenic 45.0%
ATACTATGGTCGAAGCTCCT+CGG + chr3.2:54793599-54793618 MS.gene03975:CDS 45.0%
ATCCTGCAGAAAGAACCATG+TGG + chr3.2:54791487-54791506 MS.gene03975:CDS 45.0%
ATCTGCTACCTTAGTTGCCA+TGG + chr3.2:54793931-54793950 MS.gene03975:CDS 45.0%
ATGGAACATCGTCCGGATTA+TGG - chr3.2:54792140-54792159 None:intergenic 45.0%
ATGGCAACTAAGGTAGCAGA+TGG - chr3.2:54793932-54793951 None:intergenic 45.0%
ATGTCCCTTTGCTCATCATG+GGG + chr3.2:54791020-54791039 MS.gene03975:CDS 45.0%
ATGTCCCTTTGCTCATTCTG+GGG + chr3.2:54795650-54795669 MS.gene03975:CDS 45.0%
ATGTGAAGGCAAAGCAGAAC+TGG - chr3.2:54791286-54791305 None:intergenic 45.0%
ATGTTTGAATATGCGGTGGG+AGG + chr3.2:54792502-54792521 MS.gene03975:intron 45.0%
CAAGATATGATGCCCTTTCG+AGG + chr3.2:54791841-54791860 MS.gene03975:CDS 45.0%
CAATCAGAGAAGGCAGTAGA+AGG - chr3.2:54796503-54796522 None:intergenic 45.0%
CAATCTCCGACAGCAATGAA+GGG + chr3.2:54791717-54791736 MS.gene03975:CDS 45.0%
CAGAATGGATCATGCAGTAG+AGG + chr3.2:54795735-54795754 MS.gene03975:CDS 45.0%
CCCCAATCAGAGAAAGTAGA+AGG - chr3.2:54793959-54793978 None:intergenic 45.0%
CCTTACGAAACTCAGGACAA+GGG + chr3.2:54793760-54793779 MS.gene03975:intron 45.0%
CTTCTACTGCCTTCTCTGAT+TGG + chr3.2:54796501-54796520 MS.gene03975:CDS 45.0%
CTTCTTTGCTCACAAACCTG+AGG + chr3.2:54791236-54791255 MS.gene03975:CDS 45.0%
CTTTCCCCATGATGAGCAAA+GGG - chr3.2:54791027-54791046 None:intergenic 45.0%
GAAGACTCAAATAGGCTTGC+AGG + chr3.2:54796206-54796225 MS.gene03975:CDS 45.0%
GAATGGATCATGCAGTAGAG+GGG + chr3.2:54795737-54795756 MS.gene03975:CDS 45.0%
GAATGTCCCTTTGCTCATTC+TGG + chr3.2:54795648-54795667 MS.gene03975:CDS 45.0%
GATTGGATCACCACAACTCA+AGG + chr3.2:54796355-54796374 MS.gene03975:CDS 45.0%
GCAGAACCAAGATTGCCTTA+AGG + chr3.2:54795440-54795459 MS.gene03975:intron 45.0%
GGGACACAAATCAGCAACTT+TGG + chr3.2:54793780-54793799 MS.gene03975:CDS 45.0%
GGGTGACACTGCAGAAAATA+TGG + chr3.2:54792230-54792249 MS.gene03975:intron 45.0%
GTAACATCATCTCATGCAGG+AGG + chr3.2:54796038-54796057 MS.gene03975:CDS 45.0%
GTACATGGAGCATAAGCAGA+AGG + chr3.2:54794154-54794173 MS.gene03975:intron 45.0%
GTACTAATCTGAGTCGGAGT+CGG - chr3.2:54791513-54791532 None:intergenic 45.0%
GTATTGAGCAGGATGAAGCA+AGG - chr3.2:54795796-54795815 None:intergenic 45.0%
GTCATGTGCAACGATACGAA+TGG + chr3.2:54793478-54793497 MS.gene03975:intron 45.0%
TAAGGGAGCAGGTTTCGAAA+TGG + chr3.2:54795458-54795477 MS.gene03975:CDS 45.0%
TAGAGTAGCCACACAGTTCT+TGG - chr3.2:54796313-54796332 None:intergenic 45.0%
TCCTTACGAAACTCAGGACA+AGG + chr3.2:54793759-54793778 MS.gene03975:intron 45.0%
TGAGGTAGAATCTGGAAGCT+TGG - chr3.2:54791907-54791926 None:intergenic 45.0%
TGATACCCCTTCATTGCTGT+CGG - chr3.2:54791726-54791745 None:intergenic 45.0%
TGCCGTTGATCTTCAACATC+TGG - chr3.2:54794092-54794111 None:intergenic 45.0%
TGCTGCTCTCGATAAAGTTC+TGG - chr3.2:54791872-54791891 None:intergenic 45.0%
TGCTTCGCTTGATAAAGCTC+TGG - chr3.2:54796427-54796446 None:intergenic 45.0%
TTCACCAAGTGCTTCTGCAA+TGG + chr3.2:54791320-54791339 MS.gene03975:CDS 45.0%
TTTCGAAACCTGCTCCCTTA+AGG - chr3.2:54795458-54795477 None:intergenic 45.0%
! AATTTAGACTGGTCCATCCG+CGG + chr3.2:54793992-54794011 MS.gene03975:CDS 45.0%
! AGGCTCTAATTCAACTGAGG+TGG - chr3.2:54796483-54796502 None:intergenic 45.0%
! AGTGGAGTACCAATCAGAGA+AGG - chr3.2:54796513-54796532 None:intergenic 45.0%
! CACAATTGCTCTGGATAGGA+TGG - chr3.2:54796791-54796810 None:intergenic 45.0%
! CATGCACAATTGCTCTGGAT+AGG - chr3.2:54796795-54796814 None:intergenic 45.0%
! CTCATTCTGGGGAAATTGCA+AGG + chr3.2:54795661-54795680 MS.gene03975:CDS 45.0%
!! AAGGTAGATTGGTCTATCCC+CGG + chr3.2:54796539-54796558 MS.gene03975:CDS 45.0%
!! AGCGTTGTTCTGTATCGACT+AGG - chr3.2:54791180-54791199 None:intergenic 45.0%
!! GAATCCATTGCAGAAGCACT+TGG - chr3.2:54795954-54795973 None:intergenic 45.0%
!! TTCAAGTTCTGGCTTCATCC+TGG - chr3.2:54793696-54793715 None:intergenic 45.0%
!! TTGGGTTAGCTCACTTGTGA+AGG + chr3.2:54796685-54796704 MS.gene03975:CDS 45.0%
!!! GGGTTGATGCCTTTTCGAAA+CGG + chr3.2:54793855-54793874 MS.gene03975:CDS 45.0%
AATCTGTTGCTCGGCATCTG+AGG - chr3.2:54791459-54791478 None:intergenic 50.0%
AGAAGGCTCCATGGCAACTA+AGG - chr3.2:54793942-54793961 None:intergenic 50.0%
ATCCTGCAGGAAGAACCATG+TGG + chr3.2:54791397-54791416 MS.gene03975:CDS 50.0%
ATTGAGTTCATCACCGCGGA+TGG - chr3.2:54794008-54794027 None:intergenic 50.0%
CAAGATTGCCTTAAGGGAGC+AGG + chr3.2:54795447-54795466 MS.gene03975:CDS 50.0%
CAATGACTAGTGCAGCAGCT+TGG + chr3.2:54794872-54794891 MS.gene03975:CDS 50.0%
CACATGGTGTTCTTGAGTCC+GGG + chr3.2:54791148-54791167 MS.gene03975:CDS 50.0%
CATGGAGCATAAGCAGAAGG+TGG + chr3.2:54794157-54794176 MS.gene03975:intron 50.0%
CCCTTGTCCTGAGTTTCGTA+AGG - chr3.2:54793763-54793782 None:intergenic 50.0%
CTGCTCCCTTAAGGCAATCT+TGG - chr3.2:54795449-54795468 None:intergenic 50.0%
CTTCTTTGCTCACAAACCCG+AGG + chr3.2:54795863-54795882 MS.gene03975:CDS 50.0%
CTTTATCAAGCGAAGCAGCG+TGG + chr3.2:54796430-54796449 MS.gene03975:CDS 50.0%
CTTTATCGAGAGCAGCAGCA+TGG + chr3.2:54791875-54791894 MS.gene03975:CDS 50.0%
GATATTGCAGACGGTGTCCA+AGG - chr3.2:54791375-54791394 None:intergenic 50.0%
GATGTTACAGACGGAGTCCA+AGG - chr3.2:54796026-54796045 None:intergenic 50.0%
GCAATGCTATAATCCGGACG+CGG + chr3.2:54794109-54794128 MS.gene03975:intron 50.0%
GCACATGGTGTTCTTGAGTC+CGG + chr3.2:54791147-54791166 MS.gene03975:CDS 50.0%
GCTTTCCCCATGATGAGCAA+AGG - chr3.2:54791028-54791047 None:intergenic 50.0%
GGACATTCTGTCCACTCATG+AGG - chr3.2:54795636-54795655 None:intergenic 50.0%
GGATAGGATGGAACATCGTC+CGG - chr3.2:54796779-54796798 None:intergenic 50.0%
GGCTAAGATGGAACATCGTC+CGG - chr3.2:54792147-54792166 None:intergenic 50.0%
GGGATAATGCTCCTCATGAG+TGG + chr3.2:54795622-54795641 MS.gene03975:CDS 50.0%
GTACGATTCTGAGTCGGAGT+CGG - chr3.2:54791423-54791442 None:intergenic 50.0%
GTGAGCTAACCCAAGATTCC+TGG - chr3.2:54796679-54796698 None:intergenic 50.0%
TACTATGGTCGAAGCTCCTC+GGG + chr3.2:54793600-54793619 MS.gene03975:CDS 50.0%
TGAAGGCTCCAATGCAACTG+AGG - chr3.2:54791925-54791944 None:intergenic 50.0%
TGGATCCTCTGTGCATCTCT+AGG + chr3.2:54794206-54794225 MS.gene03975:intron 50.0%
! ACTAGCCTAGAGATGCACAG+AGG - chr3.2:54794214-54794233 None:intergenic 50.0%
! ACTGCACCGAAACTTGGTGA+AGG - chr3.2:54794993-54795012 None:intergenic 50.0%
!!! CTTTTTTGCTCGCAAACCCG+AGG - chr3.2:54793619-54793638 None:intergenic 50.0%
AATCTTCGTCGACGCTGCCT+TGG + chr3.2:54796006-54796025 MS.gene03975:CDS 55.0%
CAACCGGAGAAGGCAGTTGA+AGG - chr3.2:54791942-54791961 None:intergenic 55.0%
CTCATGCAGGAGGAACCATG+TGG + chr3.2:54796048-54796067 MS.gene03975:CDS 55.0%
CTTCAACAGGCGAAGCTCCT+CGG - chr3.2:54795883-54795902 None:intergenic 55.0%
CTTCAACTGCCTTCTCCGGT+TGG + chr3.2:54791940-54791959 MS.gene03975:CDS 55.0%
GAAGGGTCAAGTAGGCTTGC+TGG + chr3.2:54791651-54791670 MS.gene03975:CDS 55.0%
GACTAGTGCAGCAGCTTGGT+GGG + chr3.2:54794876-54794895 MS.gene03975:CDS 55.0%
GAGCCTTCAACTGCCTTCTC+CGG + chr3.2:54791936-54791955 MS.gene03975:CDS 55.0%
GGCCACATGGTTCTTTCTGC+AGG - chr3.2:54791492-54791511 None:intergenic 55.0%
TGACTAGTGCAGCAGCTTGG+TGG + chr3.2:54794875-54794894 MS.gene03975:CDS 55.0%
TGCCTTCATCGATGCAGCCT+TGG + chr3.2:54791355-54791374 MS.gene03975:CDS 55.0%
TTCAACAGGCGAAGCTCCTC+GGG - chr3.2:54795882-54795901 None:intergenic 55.0%
TTCAACGGGCGAAGTTCCTC+AGG - chr3.2:54791255-54791274 None:intergenic 55.0%
! GCTCTGGCTCCACTTCGAAA+TGG - chr3.2:54796411-54796430 None:intergenic 55.0%
! GCTCTGGCTCCGTTTCGAAA+AGG - chr3.2:54793867-54793886 None:intergenic 55.0%
! GTCCAAGGCTGCATCGATGA+AGG - chr3.2:54791360-54791379 None:intergenic 55.0%
! TGCTCGGCATCTGAGGTGTA+GGG - chr3.2:54791452-54791471 None:intergenic 55.0%
! TTGCTCGGCATCTGAGGTGT+AGG - chr3.2:54791453-54791472 None:intergenic 55.0%
!! AGTTCTGGCTCTGCCTCGAA+AGG - chr3.2:54791857-54791876 None:intergenic 55.0%
!! GTATCGACTAGGATGCAGCC+CGG - chr3.2:54791169-54791188 None:intergenic 55.0%
!! GTTCTGGCTCTGCCTCGAAA+GGG - chr3.2:54791856-54791875 None:intergenic 55.0%
CGAGGAGCTTCGCCTGTTGA+AGG + chr3.2:54795881-54795900 MS.gene03975:CDS 60.0%
CTGAGTCGGAGTCTGCCACA+TGG - chr3.2:54796066-54796085 None:intergenic 60.0%
GGCAAACACGAAACCGCGTC+CGG - chr3.2:54794125-54794144 None:intergenic 60.0%
GGCCACATGGTTCTTCCTGC+AGG - chr3.2:54791402-54791421 None:intergenic 60.0%
TGCTGCAGTCGCACGACTGA+AGG - chr3.2:54792603-54792622 None:intergenic 60.0%
!! TCTATCACGGGAGCGCCAAC+CGG - chr3.2:54791958-54791977 None:intergenic 60.0%
CTGAGTCGGAGTCGGCCACA+TGG - chr3.2:54791415-54791434 None:intergenic 65.0%
!! ACGGGAGCGCCAACCGGAGA+AGG - chr3.2:54791952-54791971 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 54790937 54796838 54790937 ID=MS.gene03975
chr3.2 mRNA 54790937 54796838 54790937 ID=MS.gene03975.t1;Parent=MS.gene03975
chr3.2 exon 54790937 54792065 54790937 ID=MS.gene03975.t1.exon1;Parent=MS.gene03975.t1
chr3.2 CDS 54790937 54792065 54790937 ID=cds.MS.gene03975.t1;Parent=MS.gene03975.t1
chr3.2 exon 54793572 54793659 54793572 ID=MS.gene03975.t1.exon2;Parent=MS.gene03975.t1
chr3.2 CDS 54793572 54793659 54793572 ID=cds.MS.gene03975.t1;Parent=MS.gene03975.t1
chr3.2 exon 54793775 54794013 54793775 ID=MS.gene03975.t1.exon3;Parent=MS.gene03975.t1
chr3.2 CDS 54793775 54794013 54793775 ID=cds.MS.gene03975.t1;Parent=MS.gene03975.t1
chr3.2 exon 54794872 54795023 54794872 ID=MS.gene03975.t1.exon4;Parent=MS.gene03975.t1
chr3.2 CDS 54794872 54795023 54794872 ID=cds.MS.gene03975.t1;Parent=MS.gene03975.t1
chr3.2 exon 54795444 54796838 54795444 ID=MS.gene03975.t1.exon5;Parent=MS.gene03975.t1
chr3.2 CDS 54795444 54796838 54795444 ID=cds.MS.gene03975.t1;Parent=MS.gene03975.t1
Gene Sequence

>MS.gene03975

ATGGAGAAGCAGCAACAAGATGATGAATTTATGATGTATACATTCAAAGTGCGGCATTGCGGTTATGTTCATGATTGGAAAAAATGTCCCTTTGCTCATCATGGGGAAAGCATAAAACGCCGTGATCCGAAGCAATATAATTACAGATGTGCCCATTGTAATGAATTTCAGAAATATAGATCATGCAGTAAAGGGGATGAATGTCAATATGCACATGGTGTTCTTGAGTCCGGGCTGCATCCTAGTCGATACAGAACAACGCTTTGCAATAATGGAACTACATGCACAAGAGAAGTTTGCTTCTTTGCTCACAAACCTGAGGAACTTCGCCCGTTGAATGCTAGTACCAGTTCTGCTTTGCCTTCACATACATTATATTCAAATTCACCAAGTGCTTCTGCAATGTATACTTTCACATTGCCTTCATCGATGCAGCCTTGGACACCGTCTGCAATATCATATCCTGCAGGAAGAACCATGTGGCCGACTCCGACTCAGAATCGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGATATCATATCCTGCAGAAAGAACCATGTGGCCGACTCCGACTCAGATTAGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGAATACTGCATTGAATGCTAGAGATAATACTCATCTGGACAGGAAATTTTTCGAATATCACAATATGCCGAATCCAATGATAGAAGGGTCAAGTAGGCTTGCTGGAGTGAATCCTACTAACCTTGAAGGCTATTTTGGTTCATCGATACAATCTCCGACAGCAATGAAGGGGTATCAGAATGTGAACCAACAACTTCAGATATATCCTTCTCACCTTACCAATTCTAATGTGGTTAGATCACAACAGTTCTGGAGTGATCCATTTTTTAATTCAAGATATGATGCCCTTTCGAGGCAGAGCCAGAACTTTATCGAGAGCAGCAGCATGGCAAGCTCCAAGCTTCCAGATTCTACCTCAGTTGCATTGGAGCCTTCAACTGCCTTCTCCGGTTGGCGCTCCCGTGATAGAAAATTAGAATTGGGTGACACTAGCAACACTTCAACAATGGCTGCTACATCAAATGTTGATGATCAGGATGGATTATTAAGATATGAAGGTATGGTTAATGAACTTGTGAAGGAAGACGATCCAACATTGTAATGTTGAAGTTGAAGATAAACTTCAGTGCCATAATCCGGACGATGTTCCATCTTAGCCGAAGCAGTTATACATGTTATTCACCTGTGATTTTTTTTAACTTTAGAGATATTCATTATATTTGGGTGACACTGCAGAAAATATGGATAGATTGCTAGTATATTGTTCCATTTTTTTCCCTTAATTCTTTGTTTTGTTATTTGTTATGTTCAATAGTGATACAAAGATTCATGAATATGCATATGCTTATAATGGTATGAAGTTAAAAATGACAACTCACCCTTCATTTGGTTAAAACATGTATCCAAACATACGCCTTGAATTATTGTTTCATAGATACTGTCATCACTATAGTTGTGTGCTTGCTTGCGCGATGAAATACAATTGTTGCGTGTATGTTTGAATATGCGGTGGGAGGTTCCAAAATCGCAGCGAAATATCACGTTTACGTTGAAGTTGCAAATAGTAGCTTCTGGTTTTCATAGTGAGAAGACCTTCAGTCGTGCGACTGCAGCAAGAAAACATGTATCCAAACATACGCCTTGAATTATGGTTTGTAACTATGAAGCACAGATGTTTTTCAGTTTCGCTTTTTATCAAGGTAAAAAATACGTATCAAACTACCACTCTTTTGGAAATAAACACACTACTACCATTCTCTTTTTTTGAATGGACGCTAGTTTAGTGATTTTGGGACACGTGATTTTTTAAATTGAAATACTGTCATAAAGTAAACTTGTGTCCAATCTTATACCATTTTATTCATAAGGTTTAAATTTTTTACAAATTTTGAAGTTACCAACTTGTGAGTAGTTACTTGCAAGTTGACTTACCACTTCATTCAACAATTGATCAAAAATTTCTGACTCAAATTCAGCACATATGCTTCCTAAATCATTTTGTCAGATGCTGAGGTTCTATTTTTGAAAAAAAGTAATATGTGTGCCTAAATCATTTTCTTTTCGCGTGTATAAAATAATATGTTTTCTCTTTCACTCTGGAAGATGTACAGCTTGTTTTTGCTGTTTGGTTAATAAGCTTATGTAACAGTTTACCACTTTGTTTTTTTTTTTTTTCTTTTCTAGTACGAAGGTTTATGTTTCTTTTTAGATTAATTGTTGTGCACAAACTAAGATCTTAAACAATACTGTGATAAACTGTATTATTATTGCAAATTTTATTTTATTTTTTGTTTAAACATTTGCAAATTTCTTGGGATTGATGATTTTATAACAAATTTAACAGACTTCCTTTCCATTTCCCTATCTGATTCCTTTCTGTTTAGTATCATATTAAAACACGTTTTCTCGTTTGAGTTTGTAAATTCTGTATAATAATAGAGAGGAAGACAAATATACTGATAAAATAAAAGTCATGTGCAACGATACGAATGGAAAACTTTGTCAAACTAGTTTGATTAGGGAAAATGAATAGGGAACACAAGAACTTCATCATAAAATTTCAGCTTTGCTTGAGTTTTCAGCCAAAGGTTATACTATGGTCGAAGCTCCTCGGGTTTGCGAGCAAAAAAGCAAACTCTTCTTGTGCAATAGGTTTCATACTTGCTAAGCCTTGTTCTATATTGACCAGGATGAAGCCAGAACTTGAAAATACCGTGTGCATATTCACAAGCATCCCCTTTACTGTATGATTCCTTACGAAACTCAGGACAAGGGACACAAATCAGCAACTTTGGGGCTATCCTTCTGATCTTTCCAATTCAAATGTGAGTGGATCACAACAATTCAGGGTTGATGCCTTTTCGAAACGGAGCCAGAGCTTTATTGAGAGCAATAGCGGGGTGAGCTTCAATTCTTTGCTTCCATCTGCTACCTTAGTTGCCATGGAGCCTTCTACTTTCTCTGATTGGGGCTCCCCTGATGAAAATTTAGACTGGTCCATCCGCGGTGATGAACTCAATAAAATGAGGAGATCTTCAAAACAGAAGTATCACTTCAACTGCTGCATTTAATATCGATGATCCAGATGTTGAAGATCAACGGCAATGCTATAATCCGGACGCGGTTTCGTGTTTGCCAGAGAAATTGTACATGGAGCATAAGCAGAAGGTGGTGTGAATCTAATGTTAACTTTGACATTGGATCCTCTGTGCATCTCTAGGCTAGTTTATTTATTAAATGTTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATAGATCTTAATTAAATATAGGTAACATTTTGCAGAAAATATGGTAAAGTGTCGATAATACAAAAGTTAGGACAGAATGCAAGTATTTTGCATCAGTAACAACTTGTTACTACTACAAGGATATAGTATATGGTTCCTTTTTTTTCTCTCTATATCTTTGCTTTGTTAATCCTTGTTAAATCTGTATTAACATTTTGTTCACTCAAGCACAAACTTAAGATCAGAATTTTATTAATTCTAATCAAGAAAGTTTGTTATCCTCAAAATGCAAATTAAGGATTTTGTCTCTACACGATTAATTCACCTGATACGAGATATATATACAGTTACAGAATGAATTTTCATAATAAAAAAAGACACTTGACCGAATTTCTTTCTTCAATATAACAAGCGCGAGACATTAGAAATGCGTGACCAATATATACAAAATACACCTCATGTAGAGTAACTTTGATTGTAAAACAAGAAACCAACTCAACTAACTCTATGAAATCTGGAACTTGATATAACAGCTTCTAACTGTTTTTCTAACTGTCTTGAACTGATCTATTTAGCAATGACTAGTGCAGCAGCTTGGTGGGCTTTTCTTTTTGACCTCAAAACCGTAAAACAACAAAAGGCACTGAAAGAGTCTACCACTTCTTCCTTTGCATTGTTTTCCAAGTTTCTGAACCTTCACCAAGTTTCGGTGCAGTTTCCTTATTCTGTAAGTTCTTCTTTTACAATTCTAGATTTATGTATTTTTCTTATTCTTCACGGTGATTCAGTGAATTTCACCAAAAGATGCGATCTTTACTAAAATTTTATGAGATTGAAATGTGTTTTCTTTCGTCAAAAAAAAAAGAAATGTGTTTTCTTGGATGCTAAGAAAGTTCCTGAAAAAGTGTGTGTTCTGAATTATTTGTGTTTGTCTTAGTAAGAGTGTACTTTTCTTATTCTTCTTGATGGTTCATTAAGTTTCGGCTAAAGATTTGATATTTTCTTAAAGTATTTGAGATTACAATGTGTTTTCTTGGTTACTAAGAAAGTCCCTGAAAAAGTGTTTCTTGGGAGTCTTGATGATTGTGTATGAAAGAATATGCTTTCTCTTTCCTGGTGATTGATGATTTTGTAACAAATTTAGCAGAACCAAGATTGCCTTAAGGGAGCAGGTTTCGAAATGGAGAAGCAGAAACAACATGTAGGTGGACCTCGAAGTATGAAGAAAGACTATCGGATCGATCGATCCCTACCTGACATAAAGAATGAGGTATATAATACAGATGAATTTAGGATGTATAAATTCAAAGTGAAACTTTGCTCATGGGATAATGCTCCTCATGAGTGGACAGAATGTCCCTTTGCTCATTCTGGGGAAATTGCAAGGCGCCGTGATCCAAAGAAATATTATTACAGTTGTGTCCATTGTTATGAATTTCAGAATGGATCATGCAGTAGAGGGGATACATGTCAATATTCACATGGTGTTTTTGAGTCCTTGCTTCATCCTGCTCAATACAGAACAAGGTTTTGCAAGTATGAAACTGAATGCACAAGAAAAGTTTGCTTCTTTGCTCACAAACCCGAGGAGCTTCGCCTGTTGAAGGCTTATACCAGTTCTGCTTTGCCTTCAACTACATCAAACTCAAATTCACCAAGTGCTTCTGCAATGGATTCTTTCACATTGAGTTCACCGTCTTCTTTGATACAATCTTCGTCGACGCTGCCTTGGACTCCGTCTGTAACATCATCTCATGCAGGAGGAACCATGTGGCAGACTCCGACTCAGATTCATACTACAGTCCCTACACTTCAGATGCTGAGTAACAGATTGAAAACTGCATTGAATGCTAATACTGATCTAGACATGAAATTTCTCGAAAATCAGCACATGCTGAAGCCAATGATAGAAGACTCAAATAGGCTTGCAGGAGTGAATCCTACTAACCATGAAGACATTTTCGGGTCATCGATACAATCTTCAAAAGGAATGCTGGTGCATCAGAATGTGAGCCAAGAACTGTGTGGCTACTCTACCGACCTTTCCGATTCAAATGTGATTGGATCACCACAACTCAAGGTTGATCCATTTATGAATTCAAGATATGATGCCATTTCGAAGTGGAGCCAGAGCTTTATCAAGCGAAGCAGCGTGGAAAACTTTAGTTACAAGCTTCCTTCTGCCACCTCAGTTGAATTAGAGCCTTCTACTGCCTTCTCTGATTGGTACTCCACTGATAGAAAGGTAGATTGGTCTATCCCCGGTGATAAACTCAATGAAATGACGACATCTTATTCATTCGGCTTCCTAGACGATACTAGCAATGTTTCAACAATGGCTGCTGCATCAAATGTTGATGAGAATTATTCATTATTAAGCCAGGAATCTTGGGTTAGCTCACTTGTGAAGGATGATGATCCAACATTGGAATCTGATCAACATTGTGTTGAAGTTGAAGATCAACTGCAATGCCATAATCCGGACGATGTTCCATCCTATCCAGAGCAATTGTGCATGTTATATGAGCCGACAGTGTTGTGA
Protein sequence

>MS.gene03975.t1

MEKQQQDDEFMMYTFKVRHCGYVHDWKKCPFAHHGESIKRRDPKQYNYRCAHCNEFQKYRSCSKGDECQYAHGVLESGLHPSRYRTTLCNNGTTCTREVCFFAHKPEELRPLNASTSSALPSHTLYSNSPSASAMYTFTLPSSMQPWTPSAISYPAGRTMWPTPTQNRTTVPTPQMPSNRLISYPAERTMWPTPTQISTTVPTPQMPSNRLNTALNARDNTHLDRKFFEYHNMPNPMIEGSSRLAGVNPTNLEGYFGSSIQSPTAMKGYQNVNQQLQIYPSHLTNSNVVRSQQFWSDPFFNSRYDALSRQSQNFIESSSMASSKLPDSTSVALEPSTAFSGWRSRDRKLELGDTSNTSTMAATSNVDDQDGLLRYEALLEFSAKGYTMVEAPRVCEQKSKLFLCNRTRDTNQQLWGYPSDLSNSNVSGSQQFRVDAFSKRSQSFIESNSGVSFNSLLPSATLVAMEPSTFSDWGSPDENLDWSIRAMTSAAAWWAFLFDLKTVKQQKALKESTTSSFALFSKFLNLHQVSVQFPYSNQDCLKGAGFEMEKQKQHVGGPRSMKKDYRIDRSLPDIKNEVYNTDEFRMYKFKVKLCSWDNAPHEWTECPFAHSGEIARRRDPKKYYYSCVHCYEFQNGSCSRGDTCQYSHGVFESLLHPAQYRTRFCKYETECTRKVCFFAHKPEELRLLKAYTSSALPSTTSNSNSPSASAMDSFTLSSPSSLIQSSSTLPWTPSVTSSHAGGTMWQTPTQIHTTVPTLQMLSNRLKTALNANTDLDMKFLENQHMLKPMIEDSNRLAGVNPTNHEDIFGSSIQSSKGMLVHQNVSQELCGYSTDLSDSNVIGSPQLKVDPFMNSRYDAISKWSQSFIKRSSVENFSYKLPSATSVELEPSTAFSDWYSTDRKVDWSIPGDKLNEMTTSYSFGFLDDTSNVSTMAAASNVDENYSLLSQESWVSSLVKDDDPTLESDQHCVEVEDQLQCHNPDDVPSYPEQLCMLYEPTVL