Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03976.t1 | XP_003590850.2 | 77 | 653 | 93 | 4 | 1 | 596 | 1 | 653 | 9.40E-279 | 969.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03976.t1 | Q9LUZ4 | 48.6 | 601 | 257 | 17 | 21 | 587 | 2 | 584 | 6.9e-137 | 489.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03976.t1 | G7I4W5 | 77.0 | 653 | 93 | 4 | 1 | 596 | 1 | 653 | 6.8e-279 | 969.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene03976.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03976.t1 | MTR_1g075890 | 76.876 | 653 | 94 | 4 | 1 | 596 | 1 | 653 | 0.0 | 946 |
| MS.gene03976.t1 | MTR_3g464260 | 75.214 | 585 | 56 | 5 | 37 | 621 | 29 | 524 | 0.0 | 840 |
| MS.gene03976.t1 | MTR_3g464280 | 66.257 | 569 | 116 | 6 | 1 | 568 | 1 | 494 | 0.0 | 689 |
| MS.gene03976.t1 | MTR_5g071070 | 51.685 | 712 | 240 | 20 | 1 | 621 | 1 | 699 | 0.0 | 606 |
| MS.gene03976.t1 | MTR_5g082830 | 46.588 | 674 | 260 | 16 | 28 | 621 | 25 | 678 | 1.00e-178 | 523 |
| MS.gene03976.t1 | MTR_5g071070 | 51.429 | 630 | 204 | 19 | 81 | 621 | 1 | 617 | 1.41e-178 | 520 |
| MS.gene03976.t1 | MTR_3g464290 | 57.079 | 445 | 143 | 10 | 185 | 612 | 58 | 471 | 1.09e-134 | 402 |
| MS.gene03976.t1 | MTR_3g070880 | 42.660 | 579 | 211 | 16 | 31 | 588 | 8 | 486 | 1.81e-133 | 401 |
| MS.gene03976.t1 | MTR_7g092070 | 47.280 | 478 | 195 | 9 | 30 | 454 | 44 | 517 | 1.91e-133 | 408 |
| MS.gene03976.t1 | MTR_3g029590 | 38.872 | 674 | 273 | 25 | 30 | 592 | 42 | 687 | 3.61e-119 | 371 |
| MS.gene03976.t1 | MTR_3g464270 | 54.570 | 372 | 134 | 8 | 226 | 585 | 8 | 356 | 8.55e-116 | 350 |
| MS.gene03976.t1 | MTR_1g050438 | 40.085 | 469 | 223 | 11 | 32 | 453 | 14 | 471 | 1.58e-101 | 321 |
| MS.gene03976.t1 | MTR_0728s0020 | 40.085 | 469 | 223 | 11 | 32 | 453 | 30 | 487 | 4.19e-101 | 321 |
| MS.gene03976.t1 | MTR_3g435590 | 44.687 | 367 | 190 | 5 | 30 | 384 | 29 | 394 | 6.01e-96 | 302 |
| MS.gene03976.t1 | MTR_3g435680 | 59.444 | 180 | 62 | 5 | 204 | 379 | 130 | 302 | 1.64e-67 | 225 |
| MS.gene03976.t1 | MTR_8g102100 | 54.217 | 166 | 70 | 1 | 221 | 380 | 75 | 240 | 3.73e-55 | 192 |
| MS.gene03976.t1 | MTR_6g090380 | 68.142 | 113 | 36 | 0 | 217 | 329 | 93 | 205 | 2.80e-53 | 187 |
| MS.gene03976.t1 | MTR_3g103960 | 48.947 | 190 | 65 | 6 | 185 | 370 | 17 | 178 | 1.12e-51 | 179 |
| MS.gene03976.t1 | MTR_2g090605 | 61.261 | 111 | 43 | 0 | 227 | 337 | 77 | 187 | 6.30e-47 | 171 |
| MS.gene03976.t1 | MTR_4g078660 | 57.658 | 111 | 47 | 0 | 219 | 329 | 52 | 162 | 1.02e-45 | 164 |
| MS.gene03976.t1 | MTR_1g081420 | 76.596 | 47 | 11 | 0 | 488 | 534 | 182 | 228 | 7.84e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03976.t1 | AT5G58620 | 48.419 | 601 | 258 | 17 | 21 | 587 | 2 | 584 | 1.52e-171 | 501 |
| MS.gene03976.t1 | AT3G55980 | 44.882 | 635 | 274 | 16 | 1 | 620 | 1 | 574 | 5.40e-161 | 474 |
| MS.gene03976.t1 | AT3G55980 | 44.882 | 635 | 274 | 16 | 1 | 620 | 68 | 641 | 2.45e-160 | 474 |
| MS.gene03976.t1 | AT2G40140 | 44.565 | 644 | 281 | 18 | 1 | 621 | 1 | 591 | 4.60e-159 | 469 |
| MS.gene03976.t1 | AT2G40140 | 44.565 | 644 | 281 | 18 | 1 | 621 | 1 | 591 | 4.60e-159 | 469 |
| MS.gene03976.t1 | AT5G12850 | 41.586 | 618 | 258 | 20 | 25 | 552 | 34 | 638 | 5.01e-131 | 401 |
| MS.gene03976.t1 | AT2G41900 | 45.513 | 468 | 196 | 11 | 25 | 449 | 40 | 491 | 3.29e-125 | 386 |
| MS.gene03976.t1 | AT4G29190 | 49.744 | 195 | 70 | 4 | 195 | 380 | 49 | 224 | 8.96e-55 | 190 |
| MS.gene03976.t1 | AT2G19810 | 53.216 | 171 | 59 | 4 | 195 | 363 | 48 | 199 | 3.01e-54 | 189 |
| MS.gene03976.t1 | AT5G07500 | 54.483 | 145 | 66 | 0 | 185 | 329 | 10 | 154 | 2.04e-53 | 183 |
| MS.gene03976.t1 | AT2G25900 | 64.348 | 115 | 41 | 0 | 220 | 334 | 83 | 197 | 1.88e-51 | 180 |
| MS.gene03976.t1 | AT2G25900 | 64.348 | 115 | 41 | 0 | 220 | 334 | 83 | 197 | 1.88e-51 | 180 |
| MS.gene03976.t1 | AT1G03790 | 51.829 | 164 | 69 | 4 | 205 | 366 | 64 | 219 | 2.10e-49 | 177 |
| MS.gene03976.t1 | AT5G44260 | 58.594 | 128 | 48 | 2 | 205 | 331 | 42 | 165 | 1.36e-46 | 169 |
Find 151 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTCGTTGTGCTGTTTC+TGG | 0.104817 | 3.2:+54787037 | MS.gene03976:CDS |
| CTTATGGTTGCTGCCTTATT+TGG | 0.182687 | 3.2:+54786935 | MS.gene03976:CDS |
| CTTACCAATTCAAATGTTAT+TGG | 0.199131 | 3.2:+54788117 | MS.gene03976:CDS |
| TTGTCAAACTGGTTTGATTA+AGG | 0.208098 | 3.2:+54786724 | MS.gene03976:CDS |
| ATCATCTTCGCCTTCTAGTA+TGG | 0.229395 | 3.2:-54787209 | None:intergenic |
| ACAAAACCACGTCGGGATTA+TGG | 0.266884 | 3.2:-54788509 | None:intergenic |
| GCCTTCTACTTTCTCTGGCT+GGG | 0.280342 | 3.2:+54788254 | MS.gene03976:CDS |
| TTGATTAAGGAAAATGAATA+TGG | 0.284568 | 3.2:+54786737 | MS.gene03976:CDS |
| CACACCCTTGCTTCCAAATA+AGG | 0.291991 | 3.2:-54786948 | None:intergenic |
| TATATAGTACAGATGAATTT+AGG | 0.296969 | 3.2:+54787362 | MS.gene03976:CDS |
| ATGAGGAAATCTTATTCTTT+CGG | 0.306520 | 3.2:+54788330 | MS.gene03976:CDS |
| AGCCTTCTACTTTCTCTGGC+TGG | 0.317283 | 3.2:+54788253 | MS.gene03976:CDS |
| TTCACAGATGCTGTTGAAAA+AGG | 0.320014 | 3.2:+54786830 | MS.gene03976:CDS |
| GAACGCAAACCAGCAACTTT+GGG | 0.341182 | 3.2:+54788080 | MS.gene03976:CDS |
| AATAGAAAACCTTGTCAAAC+TGG | 0.355053 | 3.2:+54786713 | MS.gene03976:CDS |
| GTCTTTCATCCCCTTCAAAT+AGG | 0.355872 | 3.2:+54787977 | MS.gene03976:CDS |
| TATTGATCAAATTCCATTGT+TGG | 0.357494 | 3.2:-54788462 | None:intergenic |
| CAAGGGCTTATTCTCATGAT+TGG | 0.357705 | 3.2:+54787413 | MS.gene03976:CDS |
| ATGGAGCCTTCTACTTTCTC+TGG | 0.359840 | 3.2:+54788249 | MS.gene03976:CDS |
| GAGGGTTGGATCGAAGGAAA+TGG | 0.360734 | 3.2:+54786892 | MS.gene03976:CDS |
| GTGTCCCATGCCCCGAGTTT+CGG | 0.361862 | 3.2:+54787506 | MS.gene03976:CDS |
| GCACTAGGTGAATTTGAATA+TGG | 0.364926 | 3.2:-54787727 | None:intergenic |
| GCAAACCCTTCTGGTGCATC+TGG | 0.368627 | 3.2:-54787632 | None:intergenic |
| TTCTCGGCATCTGAAGGGTT+GGG | 0.369174 | 3.2:-54787888 | None:intergenic |
| CTTTATTGATCACAGTAGTA+TGG | 0.374481 | 3.2:+54788185 | MS.gene03976:CDS |
| TAAAGAAGTGGGATTTCAAT+TGG | 0.377812 | 3.2:+54787252 | MS.gene03976:CDS |
| AATGATAGCCCCAAAGTTGC+TGG | 0.380794 | 3.2:-54788089 | None:intergenic |
| CGACCGTTGTATGCTTCTAC+TGG | 0.382257 | 3.2:+54787682 | MS.gene03976:CDS |
| AGAACGCAAACCAGCAACTT+TGG | 0.384644 | 3.2:+54788079 | MS.gene03976:CDS |
| TGATCCAATAACATTTGAAT+TGG | 0.388637 | 3.2:-54788121 | None:intergenic |
| TTCACCTAGTGCTTCTTCAA+TGG | 0.396899 | 3.2:+54787738 | MS.gene03976:CDS |
| TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 3.2:+54786919 | MS.gene03976:CDS |
| AAGTCGATGAGGTAGGATTA+TGG | 0.417281 | 3.2:+54786861 | MS.gene03976:CDS |
| GTATCTTCGGTTCAAGGAAT+AGG | 0.421539 | 3.2:+54787176 | MS.gene03976:CDS |
| CTAGTAGTATCTTCGGTTCA+AGG | 0.424399 | 3.2:+54787170 | MS.gene03976:CDS |
| AGGGTTGGATCGAAGGAAAT+GGG | 0.426387 | 3.2:+54786893 | MS.gene03976:CDS |
| ATCTGTTTCTCGGCATCTGA+AGG | 0.426852 | 3.2:-54787894 | None:intergenic |
| GGTGTGTTGTCTTATATTCT+CGG | 0.428366 | 3.2:+54786965 | MS.gene03976:CDS |
| TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 3.2:+54787395 | MS.gene03976:CDS |
| CCCCAGCCAGAGAAAGTAGA+AGG | 0.432620 | 3.2:-54788255 | None:intergenic |
| GCATGATCCTTTCCGAAACT+CGG | 0.433294 | 3.2:-54787518 | None:intergenic |
| TTGAAAACTGCACTGAATGC+TGG | 0.433495 | 3.2:+54787916 | MS.gene03976:CDS |
| GAGTGCCCCTTTGTTCATCC+AGG | 0.435304 | 3.2:+54787439 | MS.gene03976:CDS |
| TTTCTCGGCATCTGAAGGGT+TGG | 0.435722 | 3.2:-54787889 | None:intergenic |
| TGCCACGTGGTTCCAGCCAC+AGG | 0.439059 | 3.2:-54787838 | None:intergenic |
| GTGCAGCGACTTGTTTGTCT+TGG | 0.439236 | 3.2:+54787144 | MS.gene03976:CDS |
| GATAATTTCTTTAAAGAAGT+GGG | 0.439990 | 3.2:+54787241 | MS.gene03976:CDS |
| TCAGCATCATCGCCTGTGGC+TGG | 0.447105 | 3.2:+54787826 | MS.gene03976:CDS |
| TTATGGTATGGAAGGAGGGT+TGG | 0.455006 | 3.2:+54786878 | MS.gene03976:CDS |
| TCTGGCTGGGGCTCGCCAGA+TGG | 0.456502 | 3.2:+54788267 | MS.gene03976:CDS |
| TTCTGCTACCTCAGTTGCCA+TGG | 0.458161 | 3.2:+54788230 | MS.gene03976:CDS |
| GTTCTGATGCATCTGCATTA+TGG | 0.459156 | 3.2:-54788061 | None:intergenic |
| CCATTGATGTGAATGATAAC+TGG | 0.461223 | 3.2:+54787122 | MS.gene03976:CDS |
| TGTGAAGGATGCTCCAACAA+TGG | 0.461854 | 3.2:+54788449 | MS.gene03976:CDS |
| ACTCTTTCAAGCCTATTTGA+AGG | 0.467952 | 3.2:-54787988 | None:intergenic |
| ACCGAGTGTGCGGCTCAGAT+AGG | 0.471991 | 3.2:+54787008 | MS.gene03976:CDS |
| TGGAAGGAGGGTTGGATCGA+AGG | 0.473211 | 3.2:+54786886 | MS.gene03976:CDS |
| TGCTGCCTTATTTGGAAGCA+AGG | 0.473427 | 3.2:+54786943 | MS.gene03976:CDS |
| ATTAAGCTCATCGCCGCGGA+TGG | 0.474232 | 3.2:-54788304 | None:intergenic |
| CCAGTTATCATTCACATCAA+TGG | 0.477903 | 3.2:-54787122 | None:intergenic |
| AATAAGGCAGCAACCATAAG+AGG | 0.478339 | 3.2:-54786932 | None:intergenic |
| ATACTAACACCCATACTAGA+AGG | 0.478817 | 3.2:+54787199 | MS.gene03976:CDS |
| TTGGTCTCTAGTAGTATCTT+CGG | 0.479654 | 3.2:+54787163 | MS.gene03976:CDS |
| CCTTTCCGAAACTCGGGGCA+TGG | 0.481065 | 3.2:-54787511 | None:intergenic |
| GAATGCCATTACGTCATCTT+CGG | 0.481296 | 3.2:-54786810 | None:intergenic |
| CTCTTTCAAGCCTATTTGAA+GGG | 0.481736 | 3.2:-54787987 | None:intergenic |
| TACAACGGTCGAAGCTCCTC+TGG | 0.485266 | 3.2:-54787670 | None:intergenic |
| CCTTCTACTTTCTCTGGCTG+GGG | 0.490070 | 3.2:+54788255 | MS.gene03976:CDS |
| AGAACAAGGCTTTGCAAGGA+TGG | 0.491396 | 3.2:+54787607 | MS.gene03976:CDS |
| GGATAATCTTTCTTCTCAGT+TGG | 0.491420 | 3.2:-54787304 | None:intergenic |
| CATGATCCTTTCCGAAACTC+GGG | 0.495650 | 3.2:-54787517 | None:intergenic |
| GGCAAAGACAAAACCACGTC+GGG | 0.495761 | 3.2:-54788516 | None:intergenic |
| TGCTCCATGTACAATTGCTC+CGG | 0.496204 | 3.2:-54788537 | None:intergenic |
| TCGGTTAACATCAACGCGAC+TGG | 0.496578 | 3.2:-54786990 | None:intergenic |
| ACGCAAGGCGCCGTGATTCG+AGG | 0.498018 | 3.2:+54787467 | MS.gene03976:CDS |
| CAGAAGTGGCACTTCATCAA+TGG | 0.498732 | 3.2:+54788362 | MS.gene03976:CDS |
| AGCCTTGTTCTATATTGAGC+TGG | 0.500902 | 3.2:-54787595 | None:intergenic |
| TATATATCACTGTTTATGTC+AGG | 0.506505 | 3.2:-54787343 | None:intergenic |
| CCCTATCTGAGCCGCACACT+CGG | 0.510562 | 3.2:-54787009 | None:intergenic |
| TGATAATTTCTTTAAAGAAG+TGG | 0.511849 | 3.2:+54787240 | MS.gene03976:CDS |
| CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 3.2:+54787396 | MS.gene03976:CDS |
| TAGGATTATGGTATGGAAGG+AGG | 0.520921 | 3.2:+54786873 | MS.gene03976:CDS |
| TTGGGTTAATTCTCTTGTGA+AGG | 0.520969 | 3.2:+54788434 | MS.gene03976:CDS |
| AGGTAGGATTATGGTATGGA+AGG | 0.522426 | 3.2:+54786870 | MS.gene03976:CDS |
| TCAGGTAGGGATGGATCAAT+CGG | 0.525749 | 3.2:-54787325 | None:intergenic |
| AGGATTATGGTATGGAAGGA+GGG | 0.525824 | 3.2:+54786874 | MS.gene03976:CDS |
| CTTTCCGAAACTCGGGGCAT+GGG | 0.529602 | 3.2:-54787510 | None:intergenic |
| AGAAGTGGGATTTCAATTGG+TGG | 0.530447 | 3.2:+54787255 | MS.gene03976:CDS |
| TTTGCCGGAGCAATTGTACA+TGG | 0.531462 | 3.2:+54788533 | MS.gene03976:CDS |
| AAACTCGGGGCATGGGACAC+AGG | 0.532559 | 3.2:-54787503 | None:intergenic |
| TTCAGCCGAAGATGACGTAA+TGG | 0.534190 | 3.2:+54786805 | MS.gene03976:CDS |
| CGCCAGATGGAAAATTAGAC+TGG | 0.537592 | 3.2:+54788280 | MS.gene03976:CDS |
| CCGAGTGTGCGGCTCAGATA+GGG | 0.539522 | 3.2:+54787009 | MS.gene03976:CDS |
| TCATCTTCGCCTTCTAGTAT+GGG | 0.540822 | 3.2:-54787208 | None:intergenic |
| GCTGCCTTATTTGGAAGCAA+GGG | 0.541989 | 3.2:+54786944 | MS.gene03976:CDS |
| CTGTTTATGTCAGGTAGGGA+TGG | 0.542086 | 3.2:-54787334 | None:intergenic |
| AACAATATTTCCTCGAATCA+CGG | 0.544118 | 3.2:-54787477 | None:intergenic |
| GTGGAGCAGCGATACGATGT+AGG | 0.553972 | 3.2:+54787274 | MS.gene03976:CDS |
| ATCACTGTTTATGTCAGGTA+GGG | 0.554177 | 3.2:-54787338 | None:intergenic |
| AGAGAAAGTAGAAGGCTCCA+TGG | 0.558901 | 3.2:-54788247 | None:intergenic |
| TATCACTGTTTATGTCAGGT+AGG | 0.561792 | 3.2:-54787339 | None:intergenic |
| GATGGAGTCAAAGGTGGCGT+TGG | 0.561844 | 3.2:-54787805 | None:intergenic |
| TTCATCCAGGGGAAAACGCA+AGG | 0.563820 | 3.2:+54787452 | MS.gene03976:CDS |
| TCTGTTTCTCGGCATCTGAA+GGG | 0.564138 | 3.2:-54787893 | None:intergenic |
| GATGAGGTAGGATTATGGTA+TGG | 0.568486 | 3.2:+54786866 | MS.gene03976:CDS |
| TTCGGCTTTCGAAACAGAAG+TGG | 0.569692 | 3.2:+54788348 | MS.gene03976:CDS |
| AGTGCCCCTTTGTTCATCCA+GGG | 0.572844 | 3.2:+54787440 | MS.gene03976:CDS |
| CGGAAAGGATCATGCAGCAA+AGG | 0.576344 | 3.2:+54787526 | MS.gene03976:CDS |
| GCGATGAGCTTAATAAAATG+AGG | 0.583433 | 3.2:+54788313 | MS.gene03976:CDS |
| ATATAGAACAAGGCTTTGCA+AGG | 0.588932 | 3.2:+54787603 | MS.gene03976:CDS |
| TCTTTCAAGCCTATTTGAAG+GGG | 0.589279 | 3.2:-54787986 | None:intergenic |
| GCTCTCGCTTTGCTTTGAGA+AGG | 0.591116 | 3.2:-54788163 | None:intergenic |
| TCCATCAGCATCATCGCCTG+TGG | 0.592527 | 3.2:+54787822 | MS.gene03976:CDS |
| AAATAATAAGTCATGTGCAA+CGG | 0.601617 | 3.2:+54786686 | None:intergenic |
| GCCACAGGCGATGATGCTGA+TGG | 0.605560 | 3.2:-54787823 | None:intergenic |
| TGATGCATCTGCATTATGGT+CGG | 0.608731 | 3.2:-54788057 | None:intergenic |
| ATGGAACCAGATGCACCAGA+AGG | 0.610080 | 3.2:+54787626 | MS.gene03976:CDS |
| GGTGAATTTGAATATGGTGT+AGG | 0.611536 | 3.2:-54787721 | None:intergenic |
| ATGTTCTGCTGCTTCTGCCG+AGG | 0.617687 | 3.2:+54787060 | MS.gene03976:CDS |
| AGAAGGCTCCATGGCAACTG+AGG | 0.621343 | 3.2:-54788238 | None:intergenic |
| CCATGCCCCGAGTTTCGGAA+AGG | 0.623359 | 3.2:+54787511 | MS.gene03976:CDS |
| AAGCAAAAGCTTGATAACCT+CGG | 0.625088 | 3.2:-54787077 | None:intergenic |
| TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 3.2:-54787406 | None:intergenic |
| AACGCAAACCAGCAACTTTG+GGG | 0.628398 | 3.2:+54788081 | MS.gene03976:CDS |
| GAACATGAAGTCGATGAGGT+AGG | 0.628445 | 3.2:+54786854 | MS.gene03976:CDS |
| ATCCAGCTCAATATAGAACA+AGG | 0.630046 | 3.2:+54787593 | MS.gene03976:CDS |
| GAATCCATTGAAGAAGCACT+AGG | 0.630832 | 3.2:-54787742 | None:intergenic |
| TTTGAATATGGTGTAGGTGA+AGG | 0.630979 | 3.2:-54787715 | None:intergenic |
| ATTGGATCACCACAATTCAG+AGG | 0.631456 | 3.2:+54788135 | MS.gene03976:CDS |
| GCAGATTGTATCAAAGAAGA+CGG | 0.633142 | 3.2:-54787781 | None:intergenic |
| AAGGCATCTCCTCTGAATTG+TGG | 0.636288 | 3.2:-54788144 | None:intergenic |
| GTGCCCCTTTGTTCATCCAG+GGG | 0.639139 | 3.2:+54787441 | MS.gene03976:CDS |
| ATGGCAACTGAGGTAGCAGA+AGG | 0.642309 | 3.2:-54788228 | None:intergenic |
| TGGAACCAGATGCACCAGAA+GGG | 0.643509 | 3.2:+54787627 | MS.gene03976:CDS |
| AGGAAATGGGATATGAAGAG+AGG | 0.649200 | 3.2:+54786906 | MS.gene03976:CDS |
| GATGATGCTGATGGAGTCAA+AGG | 0.652271 | 3.2:-54787814 | None:intergenic |
| AAATTAGACTGGTCCATCCG+CGG | 0.660945 | 3.2:+54788291 | MS.gene03976:CDS |
| GTTGATGTTAACCGAGTGTG+CGG | 0.661303 | 3.2:+54786998 | MS.gene03976:CDS |
| TTAATCAAACCAGTTTGACA+AGG | 0.662325 | 3.2:-54786722 | None:intergenic |
| ATGATCCTTTCCGAAACTCG+GGG | 0.662697 | 3.2:-54787516 | None:intergenic |
| AGAAACAGCACAACGAAGAG+CGG | 0.669641 | 3.2:-54787035 | None:intergenic |
| AGGCGAACATGAAGTCGATG+AGG | 0.683016 | 3.2:+54786850 | MS.gene03976:CDS |
| GATGCTGATGGAGTCAAAGG+TGG | 0.696337 | 3.2:-54787811 | None:intergenic |
| TTGAAGGGGATGAAAGACTG+AGG | 0.702792 | 3.2:-54787972 | None:intergenic |
| CGCCTGTGGCTGGAACCACG+TGG | 0.709879 | 3.2:+54787836 | MS.gene03976:CDS |
| TTTCCCCTGGATGAACAAAG+GGG | 0.712080 | 3.2:-54787444 | None:intergenic |
| CTGAATCTGAGTCTGCCACG+TGG | 0.717188 | 3.2:-54787851 | None:intergenic |
| CGGCAAAGACAAAACCACGT+CGG | 0.718368 | 3.2:-54788517 | None:intergenic |
| GATGCTTGTGAATATGCACA+TGG | 0.757069 | 3.2:+54787550 | MS.gene03976:CDS |
| GAACCAGTAGAAGCATACAA+CGG | 0.765075 | 3.2:-54787685 | None:intergenic |
| GCAATGCCATAATCCCGACG+TGG | 0.771704 | 3.2:+54788503 | MS.gene03976:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTTTTAAAGTTAGT+AGG | - | chr3.2:54788018-54788037 | None:intergenic | 15.0% |
| !!! | ACTAACTTTAAAAACTTTTT+CGG | + | chr3.2:54788018-54788037 | MS.gene03976:CDS | 15.0% |
| !! | TATATAGTACAGATGAATTT+AGG | + | chr3.2:54787362-54787381 | MS.gene03976:CDS | 20.0% |
| !! | TTGATTAAGGAAAATGAATA+TGG | + | chr3.2:54786737-54786756 | MS.gene03976:CDS | 20.0% |
| !!! | CTAACTTTAAAAACTTTTTC+GGG | + | chr3.2:54788019-54788038 | MS.gene03976:CDS | 20.0% |
| !!! | GATAATTTCTTTAAAGAAGT+GGG | + | chr3.2:54787241-54787260 | MS.gene03976:CDS | 20.0% |
| !!! | TGATAATTTCTTTAAAGAAG+TGG | + | chr3.2:54787240-54787259 | MS.gene03976:CDS | 20.0% |
| ! | ATGAGGAAATCTTATTCTTT+CGG | + | chr3.2:54788330-54788349 | MS.gene03976:CDS | 25.0% |
| ! | CTTACCAATTCAAATGTTAT+TGG | + | chr3.2:54788117-54788136 | MS.gene03976:CDS | 25.0% |
| ! | TATATATCACTGTTTATGTC+AGG | - | chr3.2:54787346-54787365 | None:intergenic | 25.0% |
| ! | TATTGATCAAATTCCATTGT+TGG | - | chr3.2:54788465-54788484 | None:intergenic | 25.0% |
| ! | TGATCCAATAACATTTGAAT+TGG | - | chr3.2:54788124-54788143 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGGCATGAATCTT+GGG | + | chr3.2:54788416-54788435 | MS.gene03976:CDS | 25.0% |
| !!! | TATTTTTAAGGCATGAATCT+TGG | + | chr3.2:54788415-54788434 | MS.gene03976:CDS | 25.0% |
| AACAATATTTCCTCGAATCA+CGG | - | chr3.2:54787480-54787499 | None:intergenic | 30.0% | |
| AATAGAAAACCTTGTCAAAC+TGG | + | chr3.2:54786713-54786732 | MS.gene03976:CDS | 30.0% | |
| CTTTATTGATCACAGTAGTA+TGG | + | chr3.2:54788185-54788204 | MS.gene03976:CDS | 30.0% | |
| TAAAGAAGTGGGATTTCAAT+TGG | + | chr3.2:54787252-54787271 | MS.gene03976:CDS | 30.0% | |
| TCATGCCTTAAAAATACATC+TGG | - | chr3.2:54788411-54788430 | None:intergenic | 30.0% | |
| TTAATCAAACCAGTTTGACA+AGG | - | chr3.2:54786725-54786744 | None:intergenic | 30.0% | |
| !! | ACGATCCAGATGTATTTTTA+AGG | + | chr3.2:54788403-54788422 | MS.gene03976:CDS | 30.0% |
| !! | TTGTCAAACTGGTTTGATTA+AGG | + | chr3.2:54786724-54786743 | MS.gene03976:CDS | 30.0% |
| ACTCTTTCAAGCCTATTTGA+AGG | - | chr3.2:54787991-54788010 | None:intergenic | 35.0% | |
| ATACTAACACCCATACTAGA+AGG | + | chr3.2:54787199-54787218 | MS.gene03976:CDS | 35.0% | |
| ATATAGAACAAGGCTTTGCA+AGG | + | chr3.2:54787603-54787622 | MS.gene03976:CDS | 35.0% | |
| ATCACTGTTTATGTCAGGTA+GGG | - | chr3.2:54787341-54787360 | None:intergenic | 35.0% | |
| ATCCAGCTCAATATAGAACA+AGG | + | chr3.2:54787593-54787612 | MS.gene03976:CDS | 35.0% | |
| CCAGTTATCATTCACATCAA+TGG | - | chr3.2:54787125-54787144 | None:intergenic | 35.0% | |
| CCATTGATGTGAATGATAAC+TGG | + | chr3.2:54787122-54787141 | MS.gene03976:CDS | 35.0% | |
| CTCTTTCAAGCCTATTTGAA+GGG | - | chr3.2:54787990-54788009 | None:intergenic | 35.0% | |
| GCACTAGGTGAATTTGAATA+TGG | - | chr3.2:54787730-54787749 | None:intergenic | 35.0% | |
| GCAGATTGTATCAAAGAAGA+CGG | - | chr3.2:54787784-54787803 | None:intergenic | 35.0% | |
| GCGATGAGCTTAATAAAATG+AGG | + | chr3.2:54788313-54788332 | MS.gene03976:CDS | 35.0% | |
| GGATAATCTTTCTTCTCAGT+TGG | - | chr3.2:54787307-54787326 | None:intergenic | 35.0% | |
| GGTGAATTTGAATATGGTGT+AGG | - | chr3.2:54787724-54787743 | None:intergenic | 35.0% | |
| GGTGTGTTGTCTTATATTCT+CGG | + | chr3.2:54786965-54786984 | MS.gene03976:CDS | 35.0% | |
| TATCACTGTTTATGTCAGGT+AGG | - | chr3.2:54787342-54787361 | None:intergenic | 35.0% | |
| TCTTTCAAGCCTATTTGAAG+GGG | - | chr3.2:54787989-54788008 | None:intergenic | 35.0% | |
| TTCACAGATGCTGTTGAAAA+AGG | + | chr3.2:54786830-54786849 | MS.gene03976:CDS | 35.0% | |
| TTGGGTTAATTCTCTTGTGA+AGG | + | chr3.2:54788434-54788453 | MS.gene03976:CDS | 35.0% | |
| TTGGTCTCTAGTAGTATCTT+CGG | + | chr3.2:54787163-54787182 | MS.gene03976:CDS | 35.0% | |
| TTTGAATATGGTGTAGGTGA+AGG | - | chr3.2:54787718-54787737 | None:intergenic | 35.0% | |
| ! | AAGCAAAAGCTTGATAACCT+CGG | - | chr3.2:54787080-54787099 | None:intergenic | 35.0% |
| !! | CACATGGTATTTTTGAATGC+TGG | + | chr3.2:54787566-54787585 | MS.gene03976:CDS | 35.0% |
| !! | GCAGTTTTCAATCTGTTTCT+CGG | - | chr3.2:54787907-54787926 | None:intergenic | 35.0% |
| AAGTCGATGAGGTAGGATTA+TGG | + | chr3.2:54786861-54786880 | MS.gene03976:CDS | 40.0% | |
| AATAAGGCAGCAACCATAAG+AGG | - | chr3.2:54786935-54786954 | None:intergenic | 40.0% | |
| AGAAGTGGGATTTCAATTGG+TGG | + | chr3.2:54787255-54787274 | MS.gene03976:CDS | 40.0% | |
| AGCAAAAAAGCAAACCCTTC+TGG | - | chr3.2:54787644-54787663 | None:intergenic | 40.0% | |
| AGGAAATGGGATATGAAGAG+AGG | + | chr3.2:54786906-54786925 | MS.gene03976:CDS | 40.0% | |
| AGGATTATGGTATGGAAGGA+GGG | + | chr3.2:54786874-54786893 | MS.gene03976:CDS | 40.0% | |
| AGGTAGGATTATGGTATGGA+AGG | + | chr3.2:54786870-54786889 | MS.gene03976:CDS | 40.0% | |
| ATCATCTTCGCCTTCTAGTA+TGG | - | chr3.2:54787212-54787231 | None:intergenic | 40.0% | |
| ATTGGATCACCACAATTCAG+AGG | + | chr3.2:54788135-54788154 | MS.gene03976:CDS | 40.0% | |
| CAAGGGCTTATTCTCATGAT+TGG | + | chr3.2:54787413-54787432 | MS.gene03976:CDS | 40.0% | |
| CTAGTAGTATCTTCGGTTCA+AGG | + | chr3.2:54787170-54787189 | MS.gene03976:CDS | 40.0% | |
| GAATGCCATTACGTCATCTT+CGG | - | chr3.2:54786813-54786832 | None:intergenic | 40.0% | |
| GATGAGGTAGGATTATGGTA+TGG | + | chr3.2:54786866-54786885 | MS.gene03976:CDS | 40.0% | |
| GATGCTTGTGAATATGCACA+TGG | + | chr3.2:54787550-54787569 | MS.gene03976:CDS | 40.0% | |
| GTATCTTCGGTTCAAGGAAT+AGG | + | chr3.2:54787176-54787195 | MS.gene03976:CDS | 40.0% | |
| GTCTTTCATCCCCTTCAAAT+AGG | + | chr3.2:54787977-54787996 | MS.gene03976:CDS | 40.0% | |
| GTTCTGATGCATCTGCATTA+TGG | - | chr3.2:54788064-54788083 | None:intergenic | 40.0% | |
| TAGGATTATGGTATGGAAGG+AGG | + | chr3.2:54786873-54786892 | MS.gene03976:CDS | 40.0% | |
| TCATCTTCGCCTTCTAGTAT+GGG | - | chr3.2:54787211-54787230 | None:intergenic | 40.0% | |
| TGAGAATAAGCCCTTGAACA+AGG | - | chr3.2:54787409-54787428 | None:intergenic | 40.0% | |
| TGATGCATCTGCATTATGGT+CGG | - | chr3.2:54788060-54788079 | None:intergenic | 40.0% | |
| TTCACCTAGTGCTTCTTCAA+TGG | + | chr3.2:54787738-54787757 | MS.gene03976:CDS | 40.0% | |
| TTGAAAACTGCACTGAATGC+TGG | + | chr3.2:54787916-54787935 | MS.gene03976:CDS | 40.0% | |
| ! | CTTATGGTTGCTGCCTTATT+TGG | + | chr3.2:54786935-54786954 | MS.gene03976:CDS | 40.0% |
| ! | GAACCAGTAGAAGCATACAA+CGG | - | chr3.2:54787688-54787707 | None:intergenic | 40.0% |
| ! | GACCAGTCTAATTTTCCATC+TGG | - | chr3.2:54788285-54788304 | None:intergenic | 40.0% |
| ! | TTTTATTAAGCTCATCGCCG+CGG | - | chr3.2:54788311-54788330 | None:intergenic | 40.0% |
| ! | TTTTCCCCTGGATGAACAAA+GGG | - | chr3.2:54787448-54787467 | None:intergenic | 40.0% |
| !! | AGCCTTGTTCTATATTGAGC+TGG | - | chr3.2:54787598-54787617 | None:intergenic | 40.0% |
| !! | CAAAGTGAAGCCTTGTTCAA+GGG | + | chr3.2:54787396-54787415 | MS.gene03976:CDS | 40.0% |
| !! | GAATCCATTGAAGAAGCACT+AGG | - | chr3.2:54787745-54787764 | None:intergenic | 40.0% |
| !! | TCAAAGTGAAGCCTTGTTCA+AGG | + | chr3.2:54787395-54787414 | MS.gene03976:CDS | 40.0% |
| !!! | CTTTTTTGCTCACAAACCAG+AGG | + | chr3.2:54787654-54787673 | MS.gene03976:CDS | 40.0% |
| AACGCAAACCAGCAACTTTG+GGG | + | chr3.2:54788081-54788100 | MS.gene03976:CDS | 45.0% | |
| AATGATAGCCCCAAAGTTGC+TGG | - | chr3.2:54788092-54788111 | None:intergenic | 45.0% | |
| ACAAAACCACGTCGGGATTA+TGG | - | chr3.2:54788512-54788531 | None:intergenic | 45.0% | |
| AGAAACAGCACAACGAAGAG+CGG | - | chr3.2:54787038-54787057 | None:intergenic | 45.0% | |
| AGAACAAGGCTTTGCAAGGA+TGG | + | chr3.2:54787607-54787626 | MS.gene03976:CDS | 45.0% | |
| AGAACGCAAACCAGCAACTT+TGG | + | chr3.2:54788079-54788098 | MS.gene03976:CDS | 45.0% | |
| AGAGAAAGTAGAAGGCTCCA+TGG | - | chr3.2:54788250-54788269 | None:intergenic | 45.0% | |
| AGGGTTGGATCGAAGGAAAT+GGG | + | chr3.2:54786893-54786912 | MS.gene03976:CDS | 45.0% | |
| ATGATCCTTTCCGAAACTCG+GGG | - | chr3.2:54787519-54787538 | None:intergenic | 45.0% | |
| ATGGAGCCTTCTACTTTCTC+TGG | + | chr3.2:54788249-54788268 | MS.gene03976:CDS | 45.0% | |
| CACACCCTTGCTTCCAAATA+AGG | - | chr3.2:54786951-54786970 | None:intergenic | 45.0% | |
| CAGAAGTGGCACTTCATCAA+TGG | + | chr3.2:54788362-54788381 | MS.gene03976:CDS | 45.0% | |
| CATGATCCTTTCCGAAACTC+GGG | - | chr3.2:54787520-54787539 | None:intergenic | 45.0% | |
| CGCCAGATGGAAAATTAGAC+TGG | + | chr3.2:54788280-54788299 | MS.gene03976:CDS | 45.0% | |
| CTGTTTATGTCAGGTAGGGA+TGG | - | chr3.2:54787337-54787356 | None:intergenic | 45.0% | |
| GAACATGAAGTCGATGAGGT+AGG | + | chr3.2:54786854-54786873 | MS.gene03976:CDS | 45.0% | |
| GAACGCAAACCAGCAACTTT+GGG | + | chr3.2:54788080-54788099 | MS.gene03976:CDS | 45.0% | |
| GATGATGCTGATGGAGTCAA+AGG | - | chr3.2:54787817-54787836 | None:intergenic | 45.0% | |
| GCATGATCCTTTCCGAAACT+CGG | - | chr3.2:54787521-54787540 | None:intergenic | 45.0% | |
| GTTGATGTTAACCGAGTGTG+CGG | + | chr3.2:54786998-54787017 | MS.gene03976:CDS | 45.0% | |
| TCAGGTAGGGATGGATCAAT+CGG | - | chr3.2:54787328-54787347 | None:intergenic | 45.0% | |
| TGAAGAGAGGACACCTCTTA+TGG | + | chr3.2:54786919-54786938 | MS.gene03976:CDS | 45.0% | |
| TGCTCCATGTACAATTGCTC+CGG | - | chr3.2:54788540-54788559 | None:intergenic | 45.0% | |
| TGTGAAGGATGCTCCAACAA+TGG | + | chr3.2:54788449-54788468 | MS.gene03976:CDS | 45.0% | |
| TTATGGTATGGAAGGAGGGT+TGG | + | chr3.2:54786878-54786897 | MS.gene03976:CDS | 45.0% | |
| TTCAGCCGAAGATGACGTAA+TGG | + | chr3.2:54786805-54786824 | MS.gene03976:CDS | 45.0% | |
| TTCGGCTTTCGAAACAGAAG+TGG | + | chr3.2:54788348-54788367 | MS.gene03976:CDS | 45.0% | |
| TTGAAGGGGATGAAAGACTG+AGG | - | chr3.2:54787975-54787994 | None:intergenic | 45.0% | |
| TTTCCCCTGGATGAACAAAG+GGG | - | chr3.2:54787447-54787466 | None:intergenic | 45.0% | |
| TTTGCCGGAGCAATTGTACA+TGG | + | chr3.2:54788533-54788552 | MS.gene03976:CDS | 45.0% | |
| ! | AAATTAGACTGGTCCATCCG+CGG | + | chr3.2:54788291-54788310 | MS.gene03976:CDS | 45.0% |
| ! | AAGGCATCTCCTCTGAATTG+TGG | - | chr3.2:54788147-54788166 | None:intergenic | 45.0% |
| ! | ATCTGTTTCTCGGCATCTGA+AGG | - | chr3.2:54787897-54787916 | None:intergenic | 45.0% |
| ! | GTTTTCCCCTGGATGAACAA+AGG | - | chr3.2:54787449-54787468 | None:intergenic | 45.0% |
| ! | TCTGTTTCTCGGCATCTGAA+GGG | - | chr3.2:54787896-54787915 | None:intergenic | 45.0% |
| !! | GCTGCCTTATTTGGAAGCAA+GGG | + | chr3.2:54786944-54786963 | MS.gene03976:CDS | 45.0% |
| !! | TGCTGCCTTATTTGGAAGCA+AGG | + | chr3.2:54786943-54786962 | MS.gene03976:CDS | 45.0% |
| AGCCTTCTACTTTCTCTGGC+TGG | + | chr3.2:54788253-54788272 | MS.gene03976:CDS | 50.0% | |
| AGGCGAACATGAAGTCGATG+AGG | + | chr3.2:54786850-54786869 | MS.gene03976:CDS | 50.0% | |
| AGTGCCCCTTTGTTCATCCA+GGG | + | chr3.2:54787440-54787459 | MS.gene03976:CDS | 50.0% | |
| ATGGAACCAGATGCACCAGA+AGG | + | chr3.2:54787626-54787645 | MS.gene03976:CDS | 50.0% | |
| ATGGCAACTGAGGTAGCAGA+AGG | - | chr3.2:54788231-54788250 | None:intergenic | 50.0% | |
| CCTTCTACTTTCTCTGGCTG+GGG | + | chr3.2:54788255-54788274 | MS.gene03976:CDS | 50.0% | |
| CGACCGTTGTATGCTTCTAC+TGG | + | chr3.2:54787682-54787701 | MS.gene03976:CDS | 50.0% | |
| CGGAAAGGATCATGCAGCAA+AGG | + | chr3.2:54787526-54787545 | MS.gene03976:CDS | 50.0% | |
| CGGCAAAGACAAAACCACGT+CGG | - | chr3.2:54788520-54788539 | None:intergenic | 50.0% | |
| GAGGGTTGGATCGAAGGAAA+TGG | + | chr3.2:54786892-54786911 | MS.gene03976:CDS | 50.0% | |
| GATGCTGATGGAGTCAAAGG+TGG | - | chr3.2:54787814-54787833 | None:intergenic | 50.0% | |
| GCCTTCTACTTTCTCTGGCT+GGG | + | chr3.2:54788254-54788273 | MS.gene03976:CDS | 50.0% | |
| GGCAAAGACAAAACCACGTC+GGG | - | chr3.2:54788519-54788538 | None:intergenic | 50.0% | |
| TCGGTTAACATCAACGCGAC+TGG | - | chr3.2:54786993-54787012 | None:intergenic | 50.0% | |
| TGGAACCAGATGCACCAGAA+GGG | + | chr3.2:54787627-54787646 | MS.gene03976:CDS | 50.0% | |
| TTCATCCAGGGGAAAACGCA+AGG | + | chr3.2:54787452-54787471 | MS.gene03976:CDS | 50.0% | |
| TTCTCGGCATCTGAAGGGTT+GGG | - | chr3.2:54787891-54787910 | None:intergenic | 50.0% | |
| TTCTGCTACCTCAGTTGCCA+TGG | + | chr3.2:54788230-54788249 | MS.gene03976:CDS | 50.0% | |
| TTTCTCGGCATCTGAAGGGT+TGG | - | chr3.2:54787892-54787911 | None:intergenic | 50.0% | |
| ! | GTGCAGCGACTTGTTTGTCT+TGG | + | chr3.2:54787144-54787163 | MS.gene03976:CDS | 50.0% |
| !! | GCTCTCGCTTTGCTTTGAGA+AGG | - | chr3.2:54788166-54788185 | None:intergenic | 50.0% |
| !! | GCTCTTCGTTGTGCTGTTTC+TGG | + | chr3.2:54787037-54787056 | MS.gene03976:CDS | 50.0% |
| !!! | CGACGTGGTTTTGTCTTTGC+CGG | + | chr3.2:54788518-54788537 | MS.gene03976:CDS | 50.0% |
| AGAAGGCTCCATGGCAACTG+AGG | - | chr3.2:54788241-54788260 | None:intergenic | 55.0% | |
| ATTAAGCTCATCGCCGCGGA+TGG | - | chr3.2:54788307-54788326 | None:intergenic | 55.0% | |
| CCCCAGCCAGAGAAAGTAGA+AGG | - | chr3.2:54788258-54788277 | None:intergenic | 55.0% | |
| CTGAATCTGAGTCTGCCACG+TGG | - | chr3.2:54787854-54787873 | None:intergenic | 55.0% | |
| CTTTCCGAAACTCGGGGCAT+GGG | - | chr3.2:54787513-54787532 | None:intergenic | 55.0% | |
| GAGTGCCCCTTTGTTCATCC+AGG | + | chr3.2:54787439-54787458 | MS.gene03976:CDS | 55.0% | |
| GATGGAGTCAAAGGTGGCGT+TGG | - | chr3.2:54787808-54787827 | None:intergenic | 55.0% | |
| GCAAACCCTTCTGGTGCATC+TGG | - | chr3.2:54787635-54787654 | None:intergenic | 55.0% | |
| GCAATGCCATAATCCCGACG+TGG | + | chr3.2:54788503-54788522 | MS.gene03976:CDS | 55.0% | |
| GTGCCCCTTTGTTCATCCAG+GGG | + | chr3.2:54787441-54787460 | MS.gene03976:CDS | 55.0% | |
| GTGGAGCAGCGATACGATGT+AGG | + | chr3.2:54787274-54787293 | MS.gene03976:CDS | 55.0% | |
| TACAACGGTCGAAGCTCCTC+TGG | - | chr3.2:54787673-54787692 | None:intergenic | 55.0% | |
| TCCATCAGCATCATCGCCTG+TGG | + | chr3.2:54787822-54787841 | MS.gene03976:CDS | 55.0% | |
| TGGAAGGAGGGTTGGATCGA+AGG | + | chr3.2:54786886-54786905 | MS.gene03976:CDS | 55.0% | |
| ! | ATGTTCTGCTGCTTCTGCCG+AGG | + | chr3.2:54787060-54787079 | MS.gene03976:CDS | 55.0% |
| AAACTCGGGGCATGGGACAC+AGG | - | chr3.2:54787506-54787525 | None:intergenic | 60.0% | |
| ACCGAGTGTGCGGCTCAGAT+AGG | + | chr3.2:54787008-54787027 | MS.gene03976:CDS | 60.0% | |
| CCATGCCCCGAGTTTCGGAA+AGG | + | chr3.2:54787511-54787530 | MS.gene03976:CDS | 60.0% | |
| CCCTATCTGAGCCGCACACT+CGG | - | chr3.2:54787012-54787031 | None:intergenic | 60.0% | |
| CCGAGTGTGCGGCTCAGATA+GGG | + | chr3.2:54787009-54787028 | MS.gene03976:CDS | 60.0% | |
| CCTTTCCGAAACTCGGGGCA+TGG | - | chr3.2:54787514-54787533 | None:intergenic | 60.0% | |
| GCCACAGGCGATGATGCTGA+TGG | - | chr3.2:54787826-54787845 | None:intergenic | 60.0% | |
| GTGTCCCATGCCCCGAGTTT+CGG | + | chr3.2:54787506-54787525 | MS.gene03976:CDS | 60.0% | |
| TCAGCATCATCGCCTGTGGC+TGG | + | chr3.2:54787826-54787845 | MS.gene03976:CDS | 60.0% | |
| TGCCACGTGGTTCCAGCCAC+AGG | - | chr3.2:54787841-54787860 | None:intergenic | 65.0% | |
| !! | ACGCAAGGCGCCGTGATTCG+AGG | + | chr3.2:54787467-54787486 | MS.gene03976:CDS | 65.0% |
| CGCCTGTGGCTGGAACCACG+TGG | + | chr3.2:54787836-54787855 | MS.gene03976:CDS | 70.0% | |
| TCTGGCTGGGGCTCGCCAGA+TGG | + | chr3.2:54788267-54788286 | MS.gene03976:CDS | 70.0% | |
| ! | CGGCGCCTTGCGTTTTCCCC+TGG | - | chr3.2:54787460-54787479 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 54786698 | 54788563 | 54786698 | ID=MS.gene03976 |
| chr3.2 | mRNA | 54786698 | 54788563 | 54786698 | ID=MS.gene03976.t1;Parent=MS.gene03976 |
| chr3.2 | exon | 54786698 | 54788563 | 54786698 | ID=MS.gene03976.t1.exon1;Parent=MS.gene03976.t1 |
| chr3.2 | CDS | 54786698 | 54788563 | 54786698 | ID=cds.MS.gene03976.t1;Parent=MS.gene03976.t1 |
| Gene Sequence |
| Protein sequence |
