AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040003

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040003.t1 MTR_3g071860 96.369 1267 46 0 1 1267 1 1267 0.0 2530
MS.gene040003.t1 MTR_7g026650 79.649 855 154 7 413 1266 317 1152 0.0 1364
MS.gene040003.t1 MTR_7g026650 72.930 314 78 2 21 333 11 318 6.69e-143 464
MS.gene040003.t1 MTR_5g083300 55.564 1339 479 27 5 1266 41 1340 0.0 1343
MS.gene040003.t1 MTR_5g083300 55.564 1339 479 27 5 1266 4 1303 0.0 1343
MS.gene040003.t1 MTR_1g081750 72.304 881 214 11 388 1266 263 1115 0.0 1248
MS.gene040003.t1 MTR_1g081750 68.127 251 76 2 1 251 1 247 1.17e-99 344
MS.gene040003.t1 MTR_7g026620 54.734 771 187 13 400 1170 36 644 0.0 739
MS.gene040003.t1 MTR_7g450860 33.943 766 434 18 512 1253 540 1257 1.75e-114 389
MS.gene040003.t1 MTR_7g450820 35.359 724 395 18 550 1247 537 1213 3.04e-112 382
MS.gene040003.t1 MTR_7g029525 34.016 732 433 16 529 1247 608 1302 6.47e-109 374
MS.gene040003.t1 MTR_7g050445 32.772 772 432 19 529 1267 581 1298 1.78e-104 360
MS.gene040003.t1 MTR_7g450790 33.472 720 429 16 549 1255 743 1425 5.54e-104 361
MS.gene040003.t1 MTR_4g088650 33.059 729 393 16 550 1255 548 1204 2.74e-100 347
MS.gene040003.t1 MTR_7g450780 31.795 780 449 20 514 1257 602 1334 5.11e-98 343
MS.gene040003.t1 MTR_7g026550 38.796 598 129 14 551 1147 6 367 1.32e-95 311
MS.gene040003.t1 MTR_2g437480 31.224 727 398 21 508 1222 365 1001 1.33e-88 311
MS.gene040003.t1 MTR_8g037345 30.652 721 410 21 508 1222 216 852 1.92e-85 300
MS.gene040003.t1 MTR_1g080420 26.480 608 359 20 675 1227 576 1150 1.62e-41 167
MS.gene040003.t1 MTR_1g080420 26.480 608 359 20 675 1227 707 1281 2.06e-41 167
MS.gene040003.t1 MTR_3g071660 47.486 179 42 3 846 1024 1 127 2.22e-35 131
MS.gene040003.t1 MTR_8g094070 25.342 584 331 24 665 1214 369 881 8.89e-31 132
MS.gene040003.t1 MTR_8g094070 25.342 584 331 24 665 1214 369 881 1.11e-30 132
MS.gene040003.t1 MTR_5g004720 22.844 661 377 23 640 1260 159 726 3.59e-28 123
MS.gene040003.t1 MTR_5g020000 25.730 548 318 18 716 1250 206 677 8.28e-27 118
MS.gene040003.t1 MTR_7g026590 60.000 95 32 2 466 560 11 99 1.19e-24 100
MS.gene040003.t1 MTR_4g096930 24.144 555 312 20 712 1241 752 1222 2.12e-23 108
MS.gene040003.t1 MTR_7g026610 67.606 71 23 0 200 270 13 83 7.16e-23 94.4
MS.gene040003.t1 MTR_3g106210 24.217 607 347 21 685 1256 270 798 1.72e-21 102
MS.gene040003.t1 MTR_3g106210 24.217 607 347 21 685 1256 270 798 1.96e-21 102
MS.gene040003.t1 MTR_4g032945 75.472 53 13 0 102 154 1 53 4.23e-21 89.0
MS.gene040003.t1 MTR_3g106210 24.217 607 347 21 685 1256 270 798 6.77e-21 100
MS.gene040003.t1 MTR_3g106210 24.217 607 347 21 685 1256 270 798 7.25e-21 100
MS.gene040003.t1 MTR_1g013190 25.301 498 299 19 716 1205 308 740 1.65e-20 99.0
MS.gene040003.t1 MTR_3g084600 40.945 127 37 2 588 714 16 104 3.94e-20 89.7
MS.gene040003.t1 MTR_2g084695 27.719 285 153 8 901 1185 9 240 1.56e-19 90.9
MS.gene040003.t1 MTR_3g071670 49.000 100 15 2 931 1030 2 65 1.01e-18 82.0
MS.gene040003.t1 MTR_5g005840 23.732 552 320 17 710 1249 379 841 1.84e-18 92.4
MS.gene040003.t1 MTR_7g026600 60.656 61 24 0 261 321 4 64 6.98e-18 79.3
MS.gene040003.t1 MTR_1g105050 23.370 552 321 18 710 1248 392 854 2.23e-16 85.5
MS.gene040003.t1 MTR_5g090090 22.311 502 317 12 715 1211 638 1071 2.18e-15 82.4
MS.gene040003.t1 MTR_5g090090 22.311 502 317 12 715 1211 638 1071 3.64e-15 81.6
MS.gene040003.t1 MTR_4g078495 32.335 167 100 4 1077 1236 530 690 4.36e-15 81.3
MS.gene040003.t1 MTR_4g078460 32.335 167 100 4 1077 1236 816 976 4.97e-15 81.3
MS.gene040003.t1 MTR_1g069755 31.429 140 90 3 1083 1222 750 883 6.90e-13 73.9
MS.gene040003.t1 MTR_7g045505 23.133 549 304 21 722 1232 18 486 9.15e-12 70.1
MS.gene040003.t1 MTR_7g045505 23.133 549 304 21 722 1232 18 486 9.69e-12 70.1
MS.gene040003.t1 MTR_3g053910 28.652 178 118 4 1035 1211 856 1025 1.46e-11 70.1
MS.gene040003.t1 MTR_3g053910 28.652 178 118 4 1035 1211 885 1054 1.56e-11 69.7
MS.gene040003.t1 MTR_7g090960 29.545 176 116 5 1049 1223 1173 1341 2.15e-11 69.3
MS.gene040003.t1 MTR_7g090960 29.545 176 116 5 1049 1223 1092 1260 2.51e-11 68.9
MS.gene040003.t1 MTR_7g089190 38.298 94 57 1 1113 1205 690 783 7.03e-11 67.4
MS.gene040003.t1 MTR_8g030550 23.866 507 277 20 716 1194 1009 1434 8.73e-11 67.4
MS.gene040003.t1 MTR_3g071695 84.848 33 5 0 1223 1255 11 43 9.93e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040003.t1 AT5G20420 61.519 790 278 11 488 1266 486 1260 0.0 951
MS.gene040003.t1 AT5G20420 39.264 326 169 10 5 321 3 308 3.24e-56 214
MS.gene040003.t1 AT3G24340 32.457 761 423 18 510 1255 430 1114 1.10e-107 367
MS.gene040003.t1 AT1G05490 32.603 730 428 18 548 1251 693 1384 6.48e-103 358
MS.gene040003.t1 AT2G21450 30.898 657 370 19 584 1222 92 682 7.65e-81 281
MS.gene040003.t1 AT2G16390 30.307 749 412 21 493 1222 193 850 1.56e-80 285
MS.gene040003.t1 AT2G21450 30.898 657 370 19 584 1222 183 773 1.60e-80 283
MS.gene040003.t1 AT2G21450 30.898 657 370 19 584 1222 190 780 1.73e-80 283
MS.gene040003.t1 AT2G16390 30.307 749 412 21 493 1222 190 847 2.69e-80 284
MS.gene040003.t1 AT3G42670 36.810 326 184 8 5 327 3 309 6.30e-52 201
MS.gene040003.t1 AT3G42670 36.810 326 184 8 5 327 3 309 6.30e-52 201
MS.gene040003.t1 AT3G42670 36.810 326 184 8 5 327 3 309 6.30e-52 201
MS.gene040003.t1 AT3G42670 36.810 326 184 8 5 327 3 309 6.43e-52 201
MS.gene040003.t1 AT3G19210 23.383 603 347 22 681 1246 180 704 2.70e-29 127
MS.gene040003.t1 AT3G19210 23.802 605 344 22 681 1246 180 706 9.66e-29 125
MS.gene040003.t1 AT3G19210 23.802 605 344 23 681 1246 180 706 1.00e-28 125
MS.gene040003.t1 AT5G63950 25.043 579 331 23 669 1214 364 872 1.75e-28 124
MS.gene040003.t1 AT5G63950 25.694 576 314 24 669 1214 364 855 2.48e-28 124
MS.gene040003.t1 AT1G08600 27.193 342 186 14 680 1011 718 1006 3.76e-24 111
MS.gene040003.t1 AT1G08600 34.969 163 94 4 1074 1227 1123 1282 1.25e-17 89.7
MS.gene040003.t1 AT1G08600 27.193 342 186 14 680 1011 718 1006 3.76e-24 111
MS.gene040003.t1 AT1G08600 34.969 163 94 4 1074 1227 1123 1282 1.25e-17 89.7
MS.gene040003.t1 AT1G08600 27.193 342 186 14 680 1011 718 1006 3.76e-24 111
MS.gene040003.t1 AT1G08600 34.969 163 94 4 1074 1227 1123 1282 1.25e-17 89.7
MS.gene040003.t1 AT5G44800 24.776 557 310 21 712 1249 707 1173 6.11e-21 100
MS.gene040003.t1 AT4G31900 23.772 509 272 18 715 1205 246 656 3.11e-18 91.7
MS.gene040003.t1 AT4G31900 23.772 509 272 18 715 1205 246 656 3.48e-18 91.7
MS.gene040003.t1 AT4G31900 23.772 509 272 18 715 1205 205 615 4.60e-18 90.9
MS.gene040003.t1 AT1G08600 34.969 163 94 4 1074 1227 1102 1261 1.32e-17 89.7
MS.gene040003.t1 AT3G06010 23.732 552 321 17 710 1249 419 882 3.97e-17 87.8
MS.gene040003.t1 AT2G44980 25.636 511 289 22 722 1218 80 513 2.12e-16 85.5
MS.gene040003.t1 AT1G03750 30.939 181 111 5 1064 1236 523 697 6.07e-16 84.0
MS.gene040003.t1 AT5G66750 34.091 176 109 4 1084 1258 540 709 1.08e-15 82.8
MS.gene040003.t1 AT2G25170 25.895 363 201 14 857 1205 419 727 1.55e-15 82.8
MS.gene040003.t1 AT2G25170 25.895 363 201 14 857 1205 419 727 1.55e-15 82.8
MS.gene040003.t1 AT2G25170 25.895 363 201 14 857 1205 436 744 1.66e-15 82.8
MS.gene040003.t1 AT2G25170 25.895 363 201 14 857 1205 445 753 2.08e-15 82.4
MS.gene040003.t1 AT2G44980 24.670 531 302 22 715 1218 72 531 3.95e-14 78.2
MS.gene040003.t1 AT2G44980 24.809 524 296 22 722 1218 80 532 6.70e-14 77.4
MS.gene040003.t1 AT3G57300 32.414 145 92 3 1084 1228 1222 1360 3.16e-12 72.0
MS.gene040003.t1 AT3G57300 32.414 145 92 3 1084 1228 1222 1360 3.16e-12 72.0
MS.gene040003.t1 AT3G57300 32.414 145 92 3 1084 1228 1255 1393 3.58e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1101 1205 3.80e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1101 1205 3.80e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1102 1206 3.83e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1101 1205 3.96e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1102 1206 3.97e-12 72.0
MS.gene040003.t1 AT2G28290 39.623 106 63 1 1100 1205 1101 1205 4.10e-12 72.0
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 30.714 140 91 3 1083 1222 742 875 5.71e-12 71.2
MS.gene040003.t1 AT2G18760 38.542 96 58 1 1127 1222 840 934 5.85e-12 71.2
MS.gene040003.t1 AT5G19310 29.319 191 122 4 1065 1254 427 605 8.86e-12 70.5
MS.gene040003.t1 AT5G19310 29.319 191 122 4 1065 1254 691 869 1.03e-11 70.1
MS.gene040003.t1 AT2G13370 33.846 130 79 2 1086 1214 957 1080 1.34e-11 70.1
MS.gene040003.t1 AT2G13370 33.846 130 79 2 1086 1214 957 1080 1.34e-11 70.1
MS.gene040003.t1 AT2G13370 33.846 130 79 2 1086 1214 957 1080 1.34e-11 70.1
MS.gene040003.t1 AT5G05130 34.959 123 74 3 1084 1205 725 842 3.31e-11 68.6

Find 186 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGAAGAATCATTGATTT+TGG 0.165047 3.2:+65053051 None:intergenic
TTCTCCTCTTTGTACCTCTT+TGG 0.168701 3.2:+65053549 None:intergenic
ATTAGTCAAATAATGATATT+TGG 0.190711 3.2:+65054899 None:intergenic
TGATGGTGATGGCAAGTTTA+AGG 0.208095 3.2:-65054946 MS.gene040003:CDS
TTTAGATTGGATGAAGAAAT+TGG 0.208762 3.2:-65053985 MS.gene040003:CDS
CCTCTGAAATTAAGCCTTAT+AGG 0.223041 3.2:-65055517 MS.gene040003:CDS
AACTAGACTGTTGGAGAAAA+AGG 0.245328 3.2:-65054475 MS.gene040003:CDS
TCATCACTTGATATTGTTGT+AGG 0.263435 3.2:+65054816 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 3.2:+65052817 None:intergenic
ACTATCCCTGGATTCTTTCT+TGG 0.272245 3.2:+65054020 None:intergenic
CATATAAGTTGTTCTCTTGT+AGG 0.274870 3.2:+65055085 None:intergenic
TTATAATCTTCATCAACTTT+TGG 0.276698 3.2:+65053489 None:intergenic
GCATAATATTGCTGGCTCTA+TGG 0.279345 3.2:-65053331 MS.gene040003:CDS
TAGTGATGTCAAACATGTTT+TGG 0.279882 3.2:-65053013 MS.gene040003:CDS
TCTCCTCTTTGTACCTCTTT+GGG 0.286021 3.2:+65053550 None:intergenic
ACTATCTATTATTTCCTTGC+AGG 0.289125 3.2:+65054563 None:intergenic
ACATCAAGTTATCTTCTTGA+TGG 0.297384 3.2:-65054366 MS.gene040003:CDS
ATTCAATGGCGCCTATAAAA+AGG 0.298824 3.2:-65057442 None:intergenic
GCAAAATGGTAAAGAGATTA+TGG 0.302598 3.2:-65052080 MS.gene040003:CDS
AGAACTTCATGAACAAATTT+CGG 0.305114 3.2:+65052688 None:intergenic
CTTACTGGAATAGACGTAAA+TGG 0.306756 3.2:+65056288 None:intergenic
TCGACCGGGCCAGCAGAAAA+TGG 0.318508 3.2:-65051858 MS.gene040003:CDS
CTAATGATATCGACAATGTT+TGG 0.321273 3.2:-65053419 MS.gene040003:CDS
TTCTCTGCTTGCCATTTAGA+AGG 0.325243 3.2:+65051722 None:intergenic
CAAGATTGTGTATCAAGTTA+TGG 0.325678 3.2:-65055360 MS.gene040003:CDS
TGGTGCTGATGTGTTGAATT+TGG 0.328233 3.2:-65054853 MS.gene040003:CDS
CCAAAATCAATGATTCTTCC+TGG 0.329198 3.2:-65053051 MS.gene040003:CDS
ATTGATATATCTATGCTATT+AGG 0.336391 3.2:-65056336 MS.gene040003:CDS
ACTTCATGTTGTGGATGATA+TGG 0.339055 3.2:-65054724 MS.gene040003:CDS
ACATTGTTTCAGAACAATTT+CGG 0.344101 3.2:-65052742 MS.gene040003:CDS
TCTGATGAATCCCACCTATA+AGG 0.345661 3.2:+65055503 None:intergenic
CTCAACCTCAAGAGGGTAAC+TGG 0.345817 3.2:+65052354 None:intergenic
AGGGCTTTCTCTCAATGCTT+TGG 0.345836 3.2:+65052870 None:intergenic
AATTCTTCTGAGACTCTTCC+TGG 0.348075 3.2:-65052463 MS.gene040003:CDS
TTTCTTTGGCATAATATTGC+TGG 0.349057 3.2:-65053339 MS.gene040003:CDS
AGCAAATTTGATTTGAGAAA+AGG 0.352698 3.2:-65052229 MS.gene040003:CDS
GCACTTTGTCATCAGATATT+CGG 0.354010 3.2:-65056413 MS.gene040003:CDS
AATGTTTGGGAATTGATTCC+TGG 0.354233 3.2:-65053405 MS.gene040003:CDS
AAGTATTATGTTGAAGCCTT+TGG 0.358364 3.2:+65055567 None:intergenic
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 3.2:-65051733 MS.gene040003:CDS
GAAATGTATCCCTTCCCATT+TGG 0.379249 3.2:+65054692 None:intergenic
ACAGTGCAGTGAAGAAAATA+AGG 0.381838 3.2:-65053526 MS.gene040003:CDS
AAGATTGTGTATCAAGTTAT+GGG 0.381846 3.2:-65055359 MS.gene040003:CDS
TCAACTTCATTTGATGACTT+TGG 0.398311 3.2:+65055203 None:intergenic
GGAAGAATATCCTGATGATT+TGG 0.399058 3.2:-65054421 MS.gene040003:CDS
TCATCAAGTATCAAGATTCC+AGG 0.400291 3.2:+65052850 None:intergenic
GCTCAAAACAAATCTTACTT+TGG 0.400942 3.2:+65052204 None:intergenic
ACAGAAACTACAGAGGAAAA+TGG 0.408346 3.2:-65052386 MS.gene040003:CDS
AGTTACTTGAAGTTATTTCC+AGG 0.421538 3.2:-65053207 MS.gene040003:CDS
TAATGATATCGACAATGTTT+GGG 0.425400 3.2:-65053418 MS.gene040003:CDS
CACAATCTAGATTACTCGTT+GGG 0.425426 3.2:-65055463 MS.gene040003:CDS
AGTAATATTCTCAATTCTGT+TGG 0.426455 3.2:+65052772 None:intergenic
AGCATAGATATATCAATTCC+AGG 0.429264 3.2:+65056342 None:intergenic
TCATTAGTCAATGGTTCATC+AGG 0.430750 3.2:+65053435 None:intergenic
GCATTTGAAGCAGTATTGAA+TGG 0.430979 3.2:-65056516 MS.gene040003:CDS
ATATAAGTTGTTCTCTTGTA+GGG 0.439124 3.2:+65055086 None:intergenic
ATTTCTTGTGCAAAGAAGAA+TGG 0.444673 3.2:-65054873 MS.gene040003:CDS
TGATGATTTGGATGCCTTGT+GGG 0.445174 3.2:-65054409 MS.gene040003:CDS
ATACTGATATTATTAGTCCT+TGG 0.448089 3.2:-65055331 MS.gene040003:CDS
TCAAGTGATGAAGAAGTTGA+TGG 0.452513 3.2:-65054804 MS.gene040003:CDS
GTCGTACACATCAATAAAAC+CGG 0.453824 3.2:+65052492 None:intergenic
AAGAAAAGAAATGATGAGAA+AGG 0.454786 3.2:+65053233 None:intergenic
TTGACATCACTAGAAGGTCT+TGG 0.457036 3.2:+65053024 None:intergenic
GATGTATTTCATGATTATGA+TGG 0.461128 3.2:-65055245 MS.gene040003:CDS
GGTGTCGTCGAACTTGAACC+TGG 0.461275 3.2:+65053072 None:intergenic
CATGATTATGAAGAATGAAA+AGG 0.465758 3.2:-65051642 MS.gene040003:CDS
CATGGCCGTCGAACCTCTCC+AGG 0.467950 3.2:-65053090 MS.gene040003:CDS
CACAAGGCATCCAAATCATC+AGG 0.468278 3.2:+65054411 None:intergenic
ATCAAAAGCTCAACCTCAAG+AGG 0.468504 3.2:+65052346 None:intergenic
CATGAAGAACAAGATCATAA+AGG 0.469713 3.2:-65054609 MS.gene040003:CDS
ATATCACATGCTCCTGGAGC+AGG 0.473334 3.2:-65053261 MS.gene040003:CDS
TCTTTAAAGAGAAGATAAAG+AGG 0.473356 3.2:-65054752 MS.gene040003:CDS
GATTGAAGATGATATACTTA+GGG 0.473462 3.2:-65051699 MS.gene040003:CDS
AGATTGAAGATGATATACTT+AGG 0.475140 3.2:-65051700 MS.gene040003:CDS
GAGTGATCAAAAGTTTAGTA+AGG 0.477961 3.2:-65055015 MS.gene040003:CDS
CTAGAAGGTCTTGGAAATCC+AGG 0.479150 3.2:+65053033 None:intergenic
ACACAGCCTACGTAACGTTC+AGG 0.481321 3.2:+65055146 None:intergenic
GTTAACTTATACGATGATCA+AGG 0.483615 3.2:-65055662 MS.gene040003:CDS
ACACCCTAGTGTTCTTGTCA+TGG 0.484111 3.2:-65052959 MS.gene040003:CDS
AAGTCATCAAATGAAGTTGA+AGG 0.485490 3.2:-65055200 MS.gene040003:CDS
AGGACTAGAGGTCGTTTCCC+TGG 0.486339 3.2:+65053189 None:intergenic
TTCCTTGCAGGCATCAGCGT+TGG 0.488224 3.2:+65054575 None:intergenic
CACCCTAGTGTTCTTGTCAT+GGG 0.490664 3.2:-65052958 MS.gene040003:CDS
CTGGAGAGGTTCGACGGCCA+TGG 0.491604 3.2:+65053091 None:intergenic
GTGCCGGTTTATCTTATCCA+TGG 0.492001 3.2:-65053108 MS.gene040003:CDS
TTACGATAATTAGCATCAAA+TGG 0.492300 3.2:+65057398 None:intergenic
ACAGTAGGCTCTTCTTCAGT+TGG 0.493427 3.2:+65054516 None:intergenic
GAGCTAGACTTGTTTGAAAG+AGG 0.495712 3.2:-65052046 MS.gene040003:CDS
AAAGAGATTATGGTACTAAC+GGG 0.497650 3.2:-65052070 MS.gene040003:CDS
TATTATGTTGAAGCCTTTGG+AGG 0.500254 3.2:+65055570 None:intergenic
TTGTCGATATCATTAGTCAA+TGG 0.500652 3.2:+65053426 None:intergenic
ACTTCATTTGATGACTTTGG+TGG 0.504051 3.2:+65055206 None:intergenic
ATCATGTTCACAACTATCCC+TGG 0.505981 3.2:+65054008 None:intergenic
AAGCAGTATTGAATGGATCA+TGG 0.507736 3.2:-65056509 MS.gene040003:CDS
AAAATGGAAGATTCCTGTGC+CGG 0.511195 3.2:-65053124 MS.gene040003:CDS
TATTGATGAGGAGAAGATGC+AGG 0.512826 3.2:-65052542 MS.gene040003:CDS
CAGATATTCGGATAAGATCA+AGG 0.513601 3.2:-65056401 MS.gene040003:CDS
TTCAGTATCAATGAAACGTA+AGG 0.514290 3.2:+65056446 None:intergenic
CTTCAACATAATACTTGTGA+AGG 0.515406 3.2:-65055560 MS.gene040003:CDS
TCAATCAATGCTTGTGCTGA+AGG 0.515842 3.2:-65051968 MS.gene040003:CDS
AACACAGCCACCACTTGAGT+TGG 0.516402 3.2:+65053284 None:intergenic
GAAGAACTACTTGGAAAGAG+TGG 0.517977 3.2:-65051784 MS.gene040003:CDS
CGGCCATGGATAAGATAAAC+CGG 0.521874 3.2:+65053105 None:intergenic
TTCACAACATTTATAAGCCA+AGG 0.522728 3.2:+65055314 None:intergenic
AACTCTATTAAGAATCTCAC+AGG 0.523720 3.2:+65052124 None:intergenic
AGGCTGTGTTGTTGAGAAGT+TGG 0.524840 3.2:-65055132 MS.gene040003:CDS
GTTACTGACGACCGGGTCGA+TGG 0.527013 3.2:-65051822 MS.gene040003:CDS
CTGATACCAAGAAAGAATCC+AGG 0.527093 3.2:-65054026 MS.gene040003:CDS
GTGTATCAGTTACTGACGAC+CGG 0.528339 3.2:-65051830 MS.gene040003:CDS
GTTACTTGAAGTTATTTCCA+GGG 0.528637 3.2:-65053206 MS.gene040003:CDS
ACATGTTTGACATCACTAGA+AGG 0.528845 3.2:+65053018 None:intergenic
TACAATCTCATGCTGTTCAT+CGG 0.532890 3.2:+65052408 None:intergenic
CTCAGAAATGTCTCGTATTG+CGG 0.533698 3.2:+65053930 None:intergenic
AGATGATATACTTAGGGAGA+TGG 0.537029 3.2:-65051693 MS.gene040003:CDS
GTTGTTGAGAAGTTGGAAGT+TGG 0.537957 3.2:-65055125 MS.gene040003:CDS
CTCTTCTTCAGATTCAGAAG+AGG 0.540428 3.2:-65055048 MS.gene040003:CDS
ATTGATGAGGAGAAGATGCA+GGG 0.542475 3.2:-65052541 MS.gene040003:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 3.2:-65052819 MS.gene040003:CDS
AGCTAGACTTGTTTGAAAGA+GGG 0.545005 3.2:-65052045 MS.gene040003:CDS
TGTGTTATATCACATGCTCC+TGG 0.545385 3.2:-65053267 MS.gene040003:CDS
AAATTGACATGAACATTGAT+CGG 0.547067 3.2:+65055688 None:intergenic
GGAATCTTGATACTTGATGA+AGG 0.550715 3.2:-65052847 MS.gene040003:CDS
CTCTATGGAACCATCACTCA+TGG 0.552151 3.2:-65053316 MS.gene040003:CDS
ATCCAACGCTGATGCCTGCA+AGG 0.554717 3.2:-65054577 MS.gene040003:CDS
GCGGAAGGAAACTAGACTGT+TGG 0.554915 3.2:-65054484 MS.gene040003:CDS
TTCCGCTTCTCATTTACAGT+AGG 0.555775 3.2:+65054501 None:intergenic
TCTTCAGATTCAGAAGAGGA+TGG 0.556076 3.2:-65055044 MS.gene040003:CDS
TGGATAAGATAAACCGGCAC+AGG 0.556571 3.2:+65053111 None:intergenic
ATAAGTATAGAAGAACTACT+TGG 0.563508 3.2:-65051793 MS.gene040003:CDS
TAAAGAGATTATGGTACTAA+CGG 0.563657 3.2:-65052071 MS.gene040003:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 3.2:-65051783 MS.gene040003:CDS
TACGATGATCAAGGTTCACT+TGG 0.567225 3.2:-65055653 MS.gene040003:CDS
TGAAATTAAGCCTTATAGGT+GGG 0.572501 3.2:-65055513 MS.gene040003:CDS
CACTTGGATCAATACATCCA+TGG 0.573583 3.2:-65052321 MS.gene040003:CDS
CCTATAAGGCTTAATTTCAG+AGG 0.573942 3.2:+65055517 None:intergenic
GATTCTAAATACCGAAGGAA+AGG 0.574058 3.2:-65052655 MS.gene040003:CDS
TTTATTGATGTGTACGACAG+TGG 0.574824 3.2:-65052487 MS.gene040003:CDS
CATCAAGTATCAAGATTCCA+GGG 0.577717 3.2:+65052851 None:intergenic
GAGTACCAGTTACCCTCTTG+AGG 0.579454 3.2:-65052359 MS.gene040003:CDS
TCACAATCTAGATTACTCGT+TGG 0.580048 3.2:-65055464 MS.gene040003:CDS
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 3.2:-65051684 MS.gene040003:CDS
GCTTGCGACGTTCGAAACGT+AGG 0.587148 3.2:-65055178 MS.gene040003:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 3.2:-65052813 MS.gene040003:CDS
ATTGTTCTGAAACAATGTGC+CGG 0.589502 3.2:+65052747 None:intergenic
TGATACCAAGAAAGAATCCA+GGG 0.590473 3.2:-65054025 MS.gene040003:CDS
TTGAACCTGGAGAGGTTCGA+CGG 0.591619 3.2:+65053085 None:intergenic
CTGATGATTTGGATGCCTTG+TGG 0.592293 3.2:-65054410 MS.gene040003:CDS
AGCCTACTGTAAATGAGAAG+CGG 0.593553 3.2:-65054503 MS.gene040003:CDS
TAGCCCATGACAAGAACACT+AGG 0.596138 3.2:+65052955 None:intergenic
CTGAAATTAAGCCTTATAGG+TGG 0.602209 3.2:-65055514 MS.gene040003:CDS
CTTATCTTCTTCCATCGACC+CGG 0.602308 3.2:+65051811 None:intergenic
GAAAGAACGTCATTTGCTTG+AGG 0.606173 3.2:-65052617 MS.gene040003:CDS
TCTAAATACCGAAGGAAAGG+CGG 0.606320 3.2:-65052652 MS.gene040003:CDS
AAAGCATTGAGAGAAAGCCC+TGG 0.610887 3.2:-65052868 MS.gene040003:CDS
ATTCGCACACAGAAAATACA+TGG 0.611483 3.2:-65052893 MS.gene040003:CDS
AATGTATAGATTTGTAAACC+AGG 0.619375 3.2:+65052445 None:intergenic
TTAAGAATCTCACAGGTGCA+AGG 0.619647 3.2:+65052131 None:intergenic
TGTATTCATTTCTTCCCACA+AGG 0.620617 3.2:+65054395 None:intergenic
CGTCGAACTTGAACCTGGAG+AGG 0.620998 3.2:+65053077 None:intergenic
GAATTGAGAATATTACTCTC+CGG 0.621894 3.2:-65052766 MS.gene040003:CDS
GAGGAAGAGACTTCATGTTG+TGG 0.623646 3.2:-65054733 MS.gene040003:CDS
TACTGTAAATGAGAAGCGGA+AGG 0.625752 3.2:-65054499 MS.gene040003:CDS
TTTGAGCCTAATCTCACGAG+TGG 0.632989 3.2:-65052188 MS.gene040003:CDS
TCAAGGTTCACTTGGTACAG+AGG 0.634309 3.2:-65055645 MS.gene040003:CDS
AGTTAGATTCTAAATACCGA+AGG 0.636709 3.2:-65052660 MS.gene040003:CDS
AGTATCGAAAAGCAATGATG+AGG 0.640512 3.2:-65054442 MS.gene040003:CDS
AAGCTATTAATGTGAGCACA+AGG 0.641563 3.2:-65054980 MS.gene040003:CDS
GATGTGTTGAATTTGGAGTA+CGG 0.641704 3.2:-65054846 MS.gene040003:CDS
GTCTTCGCAAGATACAGAAG+TGG 0.643128 3.2:-65052987 MS.gene040003:CDS
ATAGCAGGGTTCAACTGCTG+AGG 0.645924 3.2:-65054055 MS.gene040003:intron
AATTAACTCAGATATTGATG+AGG 0.647649 3.2:-65052554 MS.gene040003:CDS
AAATTTGAAGATCAAAGCAG+CGG 0.654526 3.2:-65052010 MS.gene040003:CDS
GGAATCTACTGCCTTCAATG+TGG 0.656623 3.2:-65053964 MS.gene040003:CDS
TGTATCAGTTACTGACGACC+GGG 0.657785 3.2:-65051829 MS.gene040003:CDS
GAATGGATCATGGCAACCTG+TGG 0.660516 3.2:-65056499 MS.gene040003:CDS
TCAAAAGCTCAACCTCAAGA+GGG 0.663408 3.2:+65052347 None:intergenic
TCAGATTCAGAAGAGGATGG+TGG 0.664458 3.2:-65055041 MS.gene040003:CDS
AGATTGTGTATCAAGTTATG+GGG 0.667010 3.2:-65055358 MS.gene040003:CDS
GATAGGTGGAATGCCCAAAG+AGG 0.668768 3.2:-65053563 MS.gene040003:intron
ATGCCCAAAGAGGTACAAAG+AGG 0.679372 3.2:-65053553 MS.gene040003:CDS
TTATCTTCTTGATGGAACCG+CGG 0.688834 3.2:-65054358 MS.gene040003:intron
GAAGAACAAGATCATAAAGG+CGG 0.691605 3.2:-65054606 MS.gene040003:CDS
GAACATTGATCGGATTTGTG+AGG 0.698234 3.2:+65055698 None:intergenic
GTACAGCCTGAACGTTACGT+AGG 0.705773 3.2:-65055152 MS.gene040003:CDS
AGCCCATGACAAGAACACTA+GGG 0.709112 3.2:+65052956 None:intergenic
AGATTGTACAGAAACTACAG+AGG 0.767273 3.2:-65052393 MS.gene040003:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCTTGATTAAAAAAAA+GGG - chr3.2:65052868-65052887 MS.gene040003:CDS 10.0%
!! CATATATAGTAATAAAATTA+AGG + chr3.2:65051705-65051724 None:intergenic 10.0%
!! CTTAATTTATATATAATGAT+AGG - chr3.2:65055485-65055504 MS.gene040003:CDS 10.0%
!! TAAAAAAAAAATATCAAGAA+AGG + chr3.2:65053075-65053094 None:intergenic 10.0%
!! TAATTTCTTGATTAAAAAAA+AGG - chr3.2:65052867-65052886 MS.gene040003:CDS 10.0%
!! TATATATAAATTAAGTTATC+AGG + chr3.2:65055480-65055499 None:intergenic 10.0%
!!! AATTAATACATTTTAATTAC+AGG - chr3.2:65052385-65052404 MS.gene040003:CDS 10.0%
!! AAAATATGAAAAATCATCAA+TGG - chr3.2:65051751-65051770 MS.gene040003:CDS 15.0%
!! AATTTATATATAATGATAGG+TGG - chr3.2:65055488-65055507 MS.gene040003:CDS 15.0%
!! ATTAGTCAAATAATGATATT+TGG + chr3.2:65054169-65054188 None:intergenic 15.0%
!! TATACAATAAATATCAAGAT+TGG + chr3.2:65052277-65052296 None:intergenic 15.0%
!!! AATTACATCTTTTTTAAAGA+AGG - chr3.2:65053654-65053673 MS.gene040003:intron 15.0%
!!! TTTTATATTTGACTTACAAA+TGG + chr3.2:65055161-65055180 None:intergenic 15.0%
!! AATAAAAAGTTTGAACTTAC+TGG + chr3.2:65052795-65052814 None:intergenic 20.0%
!! ACAAAATATCTAACCAAATA+AGG + chr3.2:65055431-65055450 None:intergenic 20.0%
!! ACATCAAATTGAAAAACAAT+AGG + chr3.2:65053805-65053824 None:intergenic 20.0%
!! AGAAAATAAATAGTAGTTCT+AGG + chr3.2:65052415-65052434 None:intergenic 20.0%
!! ATTGATATATCTATGCTATT+AGG - chr3.2:65052729-65052748 MS.gene040003:CDS 20.0%
!! TGATTTAATTCAACATTTGT+TGG - chr3.2:65052102-65052121 MS.gene040003:CDS 20.0%
!! TGTATACTTGATAAATTTGT+TGG - chr3.2:65051946-65051965 MS.gene040003:CDS 20.0%
!!! AAAAAGCTTTTGAATTTCTT+TGG - chr3.2:65055712-65055731 MS.gene040003:CDS 20.0%
!!! TATTTGAGAAATATTTTCAG+TGG - chr3.2:65056963-65056982 MS.gene040003:intron 20.0%
!!! TGGTTTTTCTAAGAAAAAAT+TGG + chr3.2:65052253-65052272 None:intergenic 20.0%
!!! TGTTTTTGTCTTCTTTTATA+AGG - chr3.2:65054964-65054983 MS.gene040003:CDS 20.0%
!!! TTATAATCTTCATCAACTTT+TGG + chr3.2:65055579-65055598 None:intergenic 20.0%
!!! TTGTTATTTTTCATTTGACT+TGG - chr3.2:65052161-65052180 MS.gene040003:CDS 20.0%
!!! TTTTAAACTTTTTACACCAA+CGG + chr3.2:65054792-65054811 None:intergenic 20.0%
! AAAAATATCAAGAAAGGTCA+CGG + chr3.2:65053069-65053088 None:intergenic 25.0%
! AAATTGACATGAACATTGAT+CGG + chr3.2:65053380-65053399 None:intergenic 25.0%
! AACTTCATTTCTTAGTAAAC+TGG - chr3.2:65052816-65052835 MS.gene040003:CDS 25.0%
! AAGAAAAGAAATGATGAGAA+AGG + chr3.2:65055835-65055854 None:intergenic 25.0%
! AAGATTGTGTATCAAGTTAT+GGG - chr3.2:65053706-65053725 MS.gene040003:intron 25.0%
! AATGATGTGACAATTATGAT+TGG - chr3.2:65054881-65054900 MS.gene040003:CDS 25.0%
! AATGTATAGATTTGTAAACC+AGG + chr3.2:65056623-65056642 None:intergenic 25.0%
! AATTAACTCAGATATTGATG+AGG - chr3.2:65056511-65056530 MS.gene040003:CDS 25.0%
! ACAAGGAACAAAAATTATGA+TGG - chr3.2:65054102-65054121 MS.gene040003:intron 25.0%
! ACATTGTTTCAGAACAATTT+CGG - chr3.2:65056323-65056342 MS.gene040003:CDS 25.0%
! AGAACTTCATGAACAAATTT+CGG + chr3.2:65056380-65056399 None:intergenic 25.0%
! AGATTGAAGATGATATACTT+AGG - chr3.2:65057365-65057384 MS.gene040003:intron 25.0%
! AGTAATATTCTCAATTCTGT+TGG + chr3.2:65056296-65056315 None:intergenic 25.0%
! ATAAGTATAGAAGAACTACT+TGG - chr3.2:65057272-65057291 MS.gene040003:intron 25.0%
! ATACTGATATTATTAGTCCT+TGG - chr3.2:65053734-65053753 MS.gene040003:intron 25.0%
! ATATAAGTTGTTCTCTTGTA+GGG + chr3.2:65053982-65054001 None:intergenic 25.0%
! CAAATGTGATTTATTTCAAG+TGG + chr3.2:65053237-65053256 None:intergenic 25.0%
! CAATAAATATCAAGATTGGA+TGG + chr3.2:65052273-65052292 None:intergenic 25.0%
! CATGATTATGAAGAATGAAA+AGG - chr3.2:65057423-65057442 MS.gene040003:CDS 25.0%
! GAAAATCCAAGTTCAAATTA+TGG + chr3.2:65053186-65053205 None:intergenic 25.0%
! GATGTATTTCATGATTATGA+TGG - chr3.2:65053820-65053839 MS.gene040003:intron 25.0%
! GATTGAAGATGATATACTTA+GGG - chr3.2:65057366-65057385 MS.gene040003:intron 25.0%
! GGTAAAAACTCTTAATAAAG+AGG - chr3.2:65053441-65053460 MS.gene040003:CDS 25.0%
! TAAAGAGATTATGGTACTAA+CGG - chr3.2:65056994-65057013 MS.gene040003:intron 25.0%
! TAATGATATCGACAATGTTT+GGG - chr3.2:65055647-65055666 MS.gene040003:CDS 25.0%
! TGTGAACTTCAACTTAAAAA+AGG - chr3.2:65053768-65053787 MS.gene040003:intron 25.0%
! TTAACTGTATTCTCCTTATT+TGG - chr3.2:65055415-65055434 MS.gene040003:CDS 25.0%
! TTAATCTAACAATCTATAGC+CGG + chr3.2:65051868-65051887 None:intergenic 25.0%
! TTACGATAATTAGCATCAAA+TGG + chr3.2:65051670-65051689 None:intergenic 25.0%
! TTTAGATTGGATGAAGAAAT+TGG - chr3.2:65055080-65055099 MS.gene040003:CDS 25.0%
!! AAATATTTTCAGTGGCAAAA+TGG - chr3.2:65056971-65056990 MS.gene040003:intron 25.0%
!! AACAAAAATTATGATGGTGA+TGG - chr3.2:65054108-65054127 MS.gene040003:intron 25.0%
!! ATAAACCATGATTTTGAATG+TGG - chr3.2:65052325-65052344 MS.gene040003:CDS 25.0%
!! TCTTTAAAGAGAAGATAAAG+AGG - chr3.2:65054313-65054332 MS.gene040003:intron 25.0%
!! TTGTGAACATGATTTTAGAT+TGG - chr3.2:65055067-65055086 MS.gene040003:CDS 25.0%
!! TTTAAAGTCACACATACAAT+TGG + chr3.2:65054832-65054851 None:intergenic 25.0%
!!! AGCAAATTTGATTTGAGAAA+AGG - chr3.2:65056836-65056855 MS.gene040003:intron 25.0%
!!! ATATGGATTTTGAAACCAAA+TGG - chr3.2:65054358-65054377 MS.gene040003:intron 25.0%
!!! CTGTTTTGAAACAAGAATTA+GGG + chr3.2:65052530-65052549 None:intergenic 25.0%
!!! GAAATTCAAAAGCTTTTTTC+TGG + chr3.2:65055710-65055729 None:intergenic 25.0%
!!! TATGGATTTTGAAACCAAAT+GGG - chr3.2:65054359-65054378 MS.gene040003:CDS 25.0%
!!! TGTTTTGAAACAAGAATTAG+GGG + chr3.2:65052529-65052548 None:intergenic 25.0%
AAAGAGATTATGGTACTAAC+GGG - chr3.2:65056995-65057014 MS.gene040003:intron 30.0%
AAATTTGAAGATCAAAGCAG+CGG - chr3.2:65057055-65057074 MS.gene040003:intron 30.0%
AACTCTATTAAGAATCTCAC+AGG + chr3.2:65056944-65056963 None:intergenic 30.0%
AAGTATTATGTTGAAGCCTT+TGG + chr3.2:65053501-65053520 None:intergenic 30.0%
AAGTCATCAAATGAAGTTGA+AGG - chr3.2:65053865-65053884 MS.gene040003:intron 30.0%
AATCGTGAATCACGAAAAAT+AGG + chr3.2:65055374-65055393 None:intergenic 30.0%
ACAACATATCCAACAAAATG+AGG + chr3.2:65055215-65055234 None:intergenic 30.0%
ACATCAAGTTATCTTCTTGA+TGG - chr3.2:65054699-65054718 MS.gene040003:CDS 30.0%
ACTATCTATTATTTCCTTGC+AGG + chr3.2:65054505-65054524 None:intergenic 30.0%
AGATTGTGTATCAAGTTATG+GGG - chr3.2:65053707-65053726 MS.gene040003:intron 30.0%
AGCATAGATATATCAATTCC+AGG + chr3.2:65052726-65052745 None:intergenic 30.0%
AGTTAGATTCTAAATACCGA+AGG - chr3.2:65056405-65056424 MS.gene040003:CDS 30.0%
ATTTCTTGTGCAAAGAAGAA+TGG - chr3.2:65054192-65054211 MS.gene040003:intron 30.0%
CAACATATCCAACAAAATGA+GGG + chr3.2:65055214-65055233 None:intergenic 30.0%
CAACTTAAAAAAGGAATCAC+TGG - chr3.2:65053777-65053796 MS.gene040003:intron 30.0%
CAAGATTGTGTATCAAGTTA+TGG - chr3.2:65053705-65053724 MS.gene040003:intron 30.0%
CATATAAGTTGTTCTCTTGT+AGG + chr3.2:65053983-65054002 None:intergenic 30.0%
CATGAAGAACAAGATCATAA+AGG - chr3.2:65054456-65054475 MS.gene040003:CDS 30.0%
CTAATGATATCGACAATGTT+TGG - chr3.2:65055646-65055665 MS.gene040003:CDS 30.0%
CTCTTTGTAAATTGTAGATG+TGG - chr3.2:65053311-65053330 MS.gene040003:CDS 30.0%
CTTCAACATAATACTTGTGA+AGG - chr3.2:65053505-65053524 MS.gene040003:CDS 30.0%
GAACTCTTAAAAATAGAGTC+AGG - chr3.2:65052588-65052607 MS.gene040003:CDS 30.0%
GAATTGAGAATATTACTCTC+CGG - chr3.2:65056299-65056318 MS.gene040003:CDS 30.0%
GAGTGATCAAAAGTTTAGTA+AGG - chr3.2:65054050-65054069 MS.gene040003:CDS 30.0%
GATTCAGTTCAAATATAGCA+GGG - chr3.2:65054996-65055015 MS.gene040003:CDS 30.0%
GCAAAATGGTAAAGAGATTA+TGG - chr3.2:65056985-65057004 MS.gene040003:intron 30.0%
GCTCAAAACAAATCTTACTT+TGG + chr3.2:65056864-65056883 None:intergenic 30.0%
GTTAACTTATACGATGATCA+AGG - chr3.2:65053403-65053422 MS.gene040003:CDS 30.0%
TAAATATCAAGCCAAGTGTT+TGG + chr3.2:65053290-65053309 None:intergenic 30.0%
TACAAAATGCTGTCAAATAG+CGG - chr3.2:65055313-65055332 MS.gene040003:CDS 30.0%
TCAAGTGGTTAATTCAGTTA+AGG + chr3.2:65053222-65053241 None:intergenic 30.0%
TCATCACTTGATATTGTTGT+AGG + chr3.2:65054252-65054271 None:intergenic 30.0%
TGATTCAGTTCAAATATAGC+AGG - chr3.2:65054995-65055014 MS.gene040003:CDS 30.0%
TTCACAACATTTATAAGCCA+AGG + chr3.2:65053754-65053773 None:intergenic 30.0%
TTCAGTATCAATGAAACGTA+AGG + chr3.2:65052622-65052641 None:intergenic 30.0%
TTCTAGCCATAATTTGAACT+TGG - chr3.2:65053177-65053196 MS.gene040003:CDS 30.0%
TTGTCGATATCATTAGTCAA+TGG + chr3.2:65055642-65055661 None:intergenic 30.0%
TTTCTTTGGCATAATATTGC+TGG - chr3.2:65055726-65055745 MS.gene040003:CDS 30.0%
! AATTTTCATCTGATCTTTCG+TGG - chr3.2:65053626-65053645 MS.gene040003:intron 30.0%
! AGTTACTTGAAGTTATTTCC+AGG - chr3.2:65055858-65055877 MS.gene040003:intron 30.0%
! ATCAAATTTTCATCCTCCAA+AGG - chr3.2:65053482-65053501 MS.gene040003:CDS 30.0%
! ATCATTTGTTGCATTCATCA+TGG + chr3.2:65051822-65051841 None:intergenic 30.0%
! CTCGAATGAAAATTTTCTGT+TGG + chr3.2:65054411-65054430 None:intergenic 30.0%
! GTTACTTGAAGTTATTTCCA+GGG - chr3.2:65055859-65055878 MS.gene040003:intron 30.0%
! TAGTGATGTCAAACATGTTT+TGG - chr3.2:65056052-65056071 MS.gene040003:intron 30.0%
! TCAACTTCATTTGATGACTT+TGG + chr3.2:65053865-65053884 None:intergenic 30.0%
! TGAAATTAAGCCTTATAGGT+GGG - chr3.2:65053552-65053571 MS.gene040003:CDS 30.0%
! TGATGCAAATGCCTTTTTAT+AGG + chr3.2:65051637-65051656 None:intergenic 30.0%
! TGTTTTGCACAGATCTTATA+TGG + chr3.2:65053687-65053706 None:intergenic 30.0%
! TTTTCACAAATCCACATTGA+AGG + chr3.2:65055115-65055134 None:intergenic 30.0%
!! ATTTTAGTCCCTCATTTTGT+TGG - chr3.2:65055203-65055222 MS.gene040003:CDS 30.0%
!! TAAAAAGGCATTTGCATCAA+TGG - chr3.2:65051638-65051657 MS.gene040003:CDS 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr3.2:65057175-65057194 None:intergenic 30.0%
!!! ATGTGCAACTAAGTTTTTTG+CGG - chr3.2:65056787-65056806 MS.gene040003:intron 30.0%
!!! ATTTTGAAACCAAATGGGAA+GGG - chr3.2:65054364-65054383 MS.gene040003:CDS 30.0%
!!! GCTGTTTTGAAACAAGAATT+AGG + chr3.2:65052531-65052550 None:intergenic 30.0%
!!! GTTTATTTTTGTTACACCGT+TGG - chr3.2:65054773-65054792 MS.gene040003:CDS 30.0%
!!! TCTATTTTTAAGAGTTCCAC+AGG + chr3.2:65052585-65052604 None:intergenic 30.0%
!!! TTCTTGCATGATTTTTAGTG+AGG - chr3.2:65057306-65057325 MS.gene040003:intron 30.0%
AACCTTGATTTAGTGCTTCT+AGG + chr3.2:65056251-65056270 None:intergenic 35.0%
AACTAGACTGTTGGAGAAAA+AGG - chr3.2:65054590-65054609 MS.gene040003:CDS 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr3.2:65057282-65057301 MS.gene040003:intron 35.0%
AAGCTATTAATGTGAGCACA+AGG - chr3.2:65054085-65054104 MS.gene040003:intron 35.0%
ACAGAAACTACAGAGGAAAA+TGG - chr3.2:65056679-65056698 MS.gene040003:intron 35.0%
ACAGTGCAGTGAAGAAAATA+AGG - chr3.2:65055539-65055558 MS.gene040003:CDS 35.0%
ACATGTTTGACATCACTAGA+AGG + chr3.2:65056050-65056069 None:intergenic 35.0%
ACGAGTGGTGAAAAATGAAA+AGG - chr3.2:65056892-65056911 MS.gene040003:intron 35.0%
ACTTCATGTTGTGGATGATA+TGG - chr3.2:65054341-65054360 MS.gene040003:intron 35.0%
AGACATAAACCAAACCTAGA+AGG + chr3.2:65052132-65052151 None:intergenic 35.0%
AGATGATATACTTAGGGAGA+TGG - chr3.2:65057372-65057391 MS.gene040003:intron 35.0%
AGATTGTACAGAAACTACAG+AGG - chr3.2:65056672-65056691 MS.gene040003:intron 35.0%
ATTCGCACACAGAAAATACA+TGG - chr3.2:65056172-65056191 MS.gene040003:intron 35.0%
CACAATCTAGATTACTCGTT+GGG - chr3.2:65053602-65053621 MS.gene040003:intron 35.0%
CAGATATTCGGATAAGATCA+AGG - chr3.2:65052664-65052683 MS.gene040003:CDS 35.0%
CAGTTAAGGACAAATCATTC+AGG + chr3.2:65053208-65053227 None:intergenic 35.0%
CATCAAGTATCAAGATTCCA+GGG + chr3.2:65056217-65056236 None:intergenic 35.0%
CCAAAATCAATGATTCTTCC+TGG - chr3.2:65056014-65056033 MS.gene040003:intron 35.0%
CCTATAAGGCTTAATTTCAG+AGG + chr3.2:65053551-65053570 None:intergenic 35.0%
CTTACTGGAATAGACGTAAA+TGG + chr3.2:65052780-65052799 None:intergenic 35.0%
GAAGAAAAATCCAACTCAAG+TGG - chr3.2:65055771-65055790 MS.gene040003:intron 35.0%
GAAGAACAAGATCATAAAGG+CGG - chr3.2:65054459-65054478 MS.gene040003:CDS 35.0%
GACATAAACCAAACCTAGAA+GGG + chr3.2:65052131-65052150 None:intergenic 35.0%
GATTAAAAAAAAGGGCAACC+TGG - chr3.2:65052876-65052895 MS.gene040003:CDS 35.0%
GATTCTAAATACCGAAGGAA+AGG - chr3.2:65056410-65056429 MS.gene040003:CDS 35.0%
GCACTTTGTCATCAGATATT+CGG - chr3.2:65052652-65052671 MS.gene040003:CDS 35.0%
GCTTATAAAGTTAGCTGCAA+AGG - chr3.2:65051909-65051928 MS.gene040003:CDS 35.0%
GGAAGAATATCCTGATGATT+TGG - chr3.2:65054644-65054663 MS.gene040003:CDS 35.0%
GGAATCTTGATACTTGATGA+AGG - chr3.2:65056218-65056237 MS.gene040003:intron 35.0%
GTCGTACACATCAATAAAAC+CGG + chr3.2:65056576-65056595 None:intergenic 35.0%
GTTATCAGGTAGATTCATAC+TGG + chr3.2:65055466-65055485 None:intergenic 35.0%
TACAATCTCATGCTGTTCAT+CGG + chr3.2:65056660-65056679 None:intergenic 35.0%
TATTATGTTGAAGCCTTTGG+AGG + chr3.2:65053498-65053517 None:intergenic 35.0%
TCAAGTGATGAAGAAGTTGA+TGG - chr3.2:65054261-65054280 MS.gene040003:intron 35.0%
TCACAATCTAGATTACTCGT+TGG - chr3.2:65053601-65053620 MS.gene040003:intron 35.0%
TCATCAAGTATCAAGATTCC+AGG + chr3.2:65056218-65056237 None:intergenic 35.0%
TCATTAGTCAATGGTTCATC+AGG + chr3.2:65055633-65055652 None:intergenic 35.0%
TGATACCAAGAAAGAATCCA+GGG - chr3.2:65055040-65055059 MS.gene040003:CDS 35.0%
TGTATTCATTTCTTCCCACA+AGG + chr3.2:65054673-65054692 None:intergenic 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - chr3.2:65057332-65057351 MS.gene040003:intron 35.0%
TTTATTGATGTGTACGACAG+TGG - chr3.2:65056578-65056597 MS.gene040003:intron 35.0%
! AAGCAGTATTGAATGGATCA+TGG - chr3.2:65052556-65052575 MS.gene040003:CDS 35.0%
! AATGTTTGGGAATTGATTCC+TGG - chr3.2:65055660-65055679 MS.gene040003:CDS 35.0%
! ACACATAAACCATTTTCTGC+TGG + chr3.2:65057219-65057238 None:intergenic 35.0%
! ACTTCATTTGATGACTTTGG+TGG + chr3.2:65053862-65053881 None:intergenic 35.0%
! AGCTAGACTTGTTTGAAAGA+GGG - chr3.2:65057020-65057039 MS.gene040003:intron 35.0%
! AGTATCGAAAAGCAATGATG+AGG - chr3.2:65054623-65054642 MS.gene040003:CDS 35.0%
! CTGAAATTAAGCCTTATAGG+TGG - chr3.2:65053551-65053570 MS.gene040003:CDS 35.0%
! GATGTGTTGAATTTGGAGTA+CGG - chr3.2:65054219-65054238 MS.gene040003:intron 35.0%
! GATTTTTCTTCCATGAGTGA+TGG + chr3.2:65055762-65055781 None:intergenic 35.0%
! GCATTTGAAGCAGTATTGAA+TGG - chr3.2:65052549-65052568 MS.gene040003:CDS 35.0%
! TGCTCTAACTAGTTTCTACA+AGG + chr3.2:65052445-65052464 None:intergenic 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr3.2:65056246-65056265 MS.gene040003:intron 35.0%
!! ATGTTGACTTACCAAACACT+TGG - chr3.2:65053276-65053295 MS.gene040003:CDS 35.0%
!! ATTGTTCTGAAACAATGTGC+CGG + chr3.2:65056321-65056340 None:intergenic 35.0%
!! CCTCTGAAATTAAGCCTTAT+AGG - chr3.2:65053548-65053567 MS.gene040003:CDS 35.0%
!! GTTGAGCTTTTGATAACACT+TGG - chr3.2:65056728-65056747 MS.gene040003:intron 35.0%
!!! AGCTTCTAGAGTGATTTTTC+TGG - chr3.2:65057135-65057154 MS.gene040003:intron 35.0%
!!! CCAGGAAGAATCATTGATTT+TGG + chr3.2:65056017-65056036 None:intergenic 35.0%
!!! GATTTTGAAACCAAATGGGA+AGG - chr3.2:65054363-65054382 MS.gene040003:CDS 35.0%
!!! GATTTTTAGTGAGGAGTTTG+TGG - chr3.2:65057315-65057334 MS.gene040003:intron 35.0%
AAAAATTGTCACACACACCG+CGG + chr3.2:65054727-65054746 None:intergenic 40.0%
AAAATGGAAGATTCCTGTGC+CGG - chr3.2:65055941-65055960 MS.gene040003:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr3.2:65052974-65052993 None:intergenic 40.0%
AATTCCAGGTCGTAAAAAGC+TGG + chr3.2:65052712-65052731 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr3.2:65052973-65052992 None:intergenic 40.0%
ACTATCCCTGGATTCTTTCT+TGG + chr3.2:65055048-65055067 None:intergenic 40.0%
AGACTTGAATCCTCTTCAAC+CGG - chr3.2:65051846-65051865 MS.gene040003:CDS 40.0%
AGCCTACTGTAAATGAGAAG+CGG - chr3.2:65054562-65054581 MS.gene040003:CDS 40.0%
AGTCTACAGAGTCTTTACAC+TGG - chr3.2:65054909-65054928 MS.gene040003:CDS 40.0%
ATCAAAAGCTCAACCTCAAG+AGG + chr3.2:65056722-65056741 None:intergenic 40.0%
ATCATGTTCACAACTATCCC+TGG + chr3.2:65055060-65055079 None:intergenic 40.0%
ATTGATGAGGAGAAGATGCA+GGG - chr3.2:65056524-65056543 MS.gene040003:intron 40.0%
CACTTGGATCAATACATCCA+TGG - chr3.2:65056744-65056763 MS.gene040003:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3.2:65052942-65052961 None:intergenic 40.0%
CTAGTTCCTTACAAATCGGA+GGG + chr3.2:65053104-65053123 None:intergenic 40.0%
CTCAGAAATGTCTCGTATTG+CGG + chr3.2:65055138-65055157 None:intergenic 40.0%
CTCTTCTTCAGATTCAGAAG+AGG - chr3.2:65054017-65054036 MS.gene040003:CDS 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr3.2:65052968-65052987 None:intergenic 40.0%
CTGATACCAAGAAAGAATCC+AGG - chr3.2:65055039-65055058 MS.gene040003:CDS 40.0%
GAAAAATCCAACTCAAGTGG+TGG - chr3.2:65055774-65055793 MS.gene040003:intron 40.0%
GAAAGAACGTCATTTGCTTG+AGG - chr3.2:65056448-65056467 MS.gene040003:CDS 40.0%
GAAATGTATCCCTTCCCATT+TGG + chr3.2:65054376-65054395 None:intergenic 40.0%
GAACATTGATCGGATTTGTG+AGG + chr3.2:65053370-65053389 None:intergenic 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr3.2:65057281-65057300 MS.gene040003:intron 40.0%
GTTGTTGAGAAGTTGGAAGT+TGG - chr3.2:65053940-65053959 MS.gene040003:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr3.2:65053017-65053036 None:intergenic 40.0%
TACGATGATCAAGGTTCACT+TGG - chr3.2:65053412-65053431 MS.gene040003:CDS 40.0%
TACTGTAAATGAGAAGCGGA+AGG - chr3.2:65054566-65054585 MS.gene040003:CDS 40.0%
TATTGATGAGGAGAAGATGC+AGG - chr3.2:65056523-65056542 MS.gene040003:intron 40.0%
TCAAAAGCTCAACCTCAAGA+GGG + chr3.2:65056721-65056740 None:intergenic 40.0%
TCAATCAATGCTTGTGCTGA+AGG - chr3.2:65057097-65057116 MS.gene040003:intron 40.0%
TCTAAATACCGAAGGAAAGG+CGG - chr3.2:65056413-65056432 MS.gene040003:CDS 40.0%
TCTCCTCTTTGTACCTCTTT+GGG + chr3.2:65055518-65055537 None:intergenic 40.0%
TCTGATGAATCCCACCTATA+AGG + chr3.2:65053565-65053584 None:intergenic 40.0%
TCTTCAGATTCAGAAGAGGA+TGG - chr3.2:65054021-65054040 MS.gene040003:CDS 40.0%
TGTGTTATATCACATGCTCC+TGG - chr3.2:65055798-65055817 MS.gene040003:intron 40.0%
TTAAGAATCTCACAGGTGCA+AGG + chr3.2:65056937-65056956 None:intergenic 40.0%
TTATCTTCTTGATGGAACCG+CGG - chr3.2:65054707-65054726 MS.gene040003:CDS 40.0%
TTCCGCTTCTCATTTACAGT+AGG + chr3.2:65054567-65054586 None:intergenic 40.0%
TTCTCCTCTTTGTACCTCTT+TGG + chr3.2:65055519-65055538 None:intergenic 40.0%
TTGACATCACTAGAAGGTCT+TGG + chr3.2:65056044-65056063 None:intergenic 40.0%
! CAATTTTTCCGCCTTTCCTT+CGG + chr3.2:65056424-65056443 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr3.2:65052966-65052985 MS.gene040003:CDS 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr3.2:65056252-65056271 MS.gene040003:intron 40.0%
! GAGCTAGACTTGTTTGAAAG+AGG - chr3.2:65057019-65057038 MS.gene040003:intron 40.0%
! TGATGATTTGGATGCCTTGT+GGG - chr3.2:65054656-65054675 MS.gene040003:CDS 40.0%
! TGATTTTTCTGGACTCTGAG+TGG - chr3.2:65057146-65057165 MS.gene040003:intron 40.0%
! TGCATCTTTTCTTCAAGTCC+AGG + chr3.2:65055681-65055700 None:intergenic 40.0%
! TTCTCTGCTTGCCATTTAGA+AGG + chr3.2:65057346-65057365 None:intergenic 40.0%
! TTTTCACCACTCGTGAGATT+AGG + chr3.2:65056886-65056905 None:intergenic 40.0%
!! AATTCTTCTGAGACTCTTCC+TGG - chr3.2:65056602-65056621 MS.gene040003:intron 40.0%
!! CATTTGTTGGTTTCCCTTCT+AGG - chr3.2:65052115-65052134 MS.gene040003:CDS 40.0%
!! GCATAATATTGCTGGCTCTA+TGG - chr3.2:65055734-65055753 MS.gene040003:CDS 40.0%
!! TGATGGTGATGGCAAGTTTA+AGG - chr3.2:65054119-65054138 MS.gene040003:intron 40.0%
!! TGGTGCTGATGTGTTGAATT+TGG - chr3.2:65054212-65054231 MS.gene040003:intron 40.0%
!!! TGCAACTAAGTTTTTTGCGG+AGG - chr3.2:65056790-65056809 MS.gene040003:intron 40.0%
ACACCCTAGTGTTCTTGTCA+TGG - chr3.2:65056106-65056125 MS.gene040003:intron 45.0%
ACAGTAGGCTCTTCTTCAGT+TGG + chr3.2:65054552-65054571 None:intergenic 45.0%
ACTAGACTTAACTTCGCTCC+TGG + chr3.2:65053148-65053167 None:intergenic 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr3.2:65057381-65057400 MS.gene040003:intron 45.0%
AGCCCATGACAAGAACACTA+GGG + chr3.2:65056112-65056131 None:intergenic 45.0%
AGGGCTTTCTCTCAATGCTT+TGG + chr3.2:65056198-65056217 None:intergenic 45.0%
ATCAAGAAAGGTCACGGTCA+CGG + chr3.2:65053063-65053082 None:intergenic 45.0%
CAAAAACCACACTCTACACG+TGG - chr3.2:65055904-65055923 MS.gene040003:intron 45.0%
CAACTTTACTAGTTGCGCCA+AGG - chr3.2:65053033-65053052 MS.gene040003:CDS 45.0%
CAATCTATAGCCGGTTGAAG+AGG + chr3.2:65051859-65051878 None:intergenic 45.0%
CACCCTAGTGTTCTTGTCAT+GGG - chr3.2:65056107-65056126 MS.gene040003:intron 45.0%
CGGCCATGGATAAGATAAAC+CGG + chr3.2:65055963-65055982 None:intergenic 45.0%
CTAGAAGGTCTTGGAAATCC+AGG + chr3.2:65056035-65056054 None:intergenic 45.0%
CTAGACTTAACTTCGCTCCT+GGG + chr3.2:65053147-65053166 None:intergenic 45.0%
CTCTATGGAACCATCACTCA+TGG - chr3.2:65055749-65055768 MS.gene040003:intron 45.0%
CTTATCTTCTTCCATCGACC+CGG + chr3.2:65057257-65057276 None:intergenic 45.0%
GAGGAAGAGACTTCATGTTG+TGG - chr3.2:65054332-65054351 MS.gene040003:intron 45.0%
GATTTGTAAGGAACTAGCCC+CGG - chr3.2:65053107-65053126 MS.gene040003:CDS 45.0%
GCACGCCACATTCAAAATCA+TGG + chr3.2:65052333-65052352 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr3.2:65052943-65052962 None:intergenic 45.0%
GCTAGTTCCTTACAAATCGG+AGG + chr3.2:65053105-65053124 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3.2:65052946-65052965 None:intergenic 45.0%
GGAATCTACTGCCTTCAATG+TGG - chr3.2:65055101-65055120 MS.gene040003:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr3.2:65053011-65053030 None:intergenic 45.0%
GTCTTCGCAAGATACAGAAG+TGG - chr3.2:65056078-65056097 MS.gene040003:intron 45.0%
GTGCTGCGAAAAATCACTTC+CGG - chr3.2:65056554-65056573 MS.gene040003:intron 45.0%
GTGTATCAGTTACTGACGAC+CGG - chr3.2:65057235-65057254 MS.gene040003:intron 45.0%
TAGCCCATGACAAGAACACT+AGG + chr3.2:65056113-65056132 None:intergenic 45.0%
TCAAGGTTCACTTGGTACAG+AGG - chr3.2:65053420-65053439 MS.gene040003:CDS 45.0%
TCAGATTCAGAAGAGGATGG+TGG - chr3.2:65054024-65054043 MS.gene040003:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr3.2:65053010-65053029 None:intergenic 45.0%
TGGATAAGATAAACCGGCAC+AGG + chr3.2:65055957-65055976 None:intergenic 45.0%
TGTATCAGTTACTGACGACC+GGG - chr3.2:65057236-65057255 MS.gene040003:intron 45.0%
TTTGAGCCTAATCTCACGAG+TGG - chr3.2:65056877-65056896 MS.gene040003:intron 45.0%
! AGAAAGGTTTTTCCTGCTCC+AGG + chr3.2:65055819-65055838 None:intergenic 45.0%
! AGGCTGTGTTGTTGAGAAGT+TGG - chr3.2:65053933-65053952 MS.gene040003:CDS 45.0%
! ATGCCCAAAGAGGTACAAAG+AGG - chr3.2:65055512-65055531 MS.gene040003:CDS 45.0%
! CACAAGGCATCCAAATCATC+AGG + chr3.2:65054657-65054676 None:intergenic 45.0%
! CACGTGTAGAGTGTGGTTTT+TGG + chr3.2:65055906-65055925 None:intergenic 45.0%
! CTGATGATTTGGATGCCTTG+TGG - chr3.2:65054655-65054674 MS.gene040003:CDS 45.0%
! GTTGGTTTCCCTTCTAGGTT+TGG - chr3.2:65052120-65052139 MS.gene040003:CDS 45.0%
! TAAACCATTTTCTGCTGGCC+CGG + chr3.2:65057214-65057233 None:intergenic 45.0%
! TCTGAACCCTCCGATTTGTA+AGG - chr3.2:65053095-65053114 MS.gene040003:CDS 45.0%
!! AAAGCATTGAGAGAAAGCCC+TGG - chr3.2:65056197-65056216 MS.gene040003:intron 45.0%
!! GGGGCTAGTTCCTTACAAAT+CGG + chr3.2:65053108-65053127 None:intergenic 45.0%
!! GTGCCGGTTTATCTTATCCA+TGG - chr3.2:65055957-65055976 MS.gene040003:intron 45.0%
!!! AGAGTGTGGTTTTTGGAGCT+AGG + chr3.2:65055899-65055918 None:intergenic 45.0%
!!! GTTTTTGGAGCTAGGACTAG+AGG + chr3.2:65055891-65055910 None:intergenic 45.0%
AACACAGCCACCACTTGAGT+TGG + chr3.2:65055784-65055803 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCT+TGG + chr3.2:65052998-65053017 None:intergenic 50.0%
ACACAGCCTACGTAACGTTC+AGG + chr3.2:65053922-65053941 None:intergenic 50.0%
ATAGCAGGGTTCAACTGCTG+AGG - chr3.2:65055010-65055029 MS.gene040003:CDS 50.0%
ATATCACATGCTCCTGGAGC+AGG - chr3.2:65055804-65055823 MS.gene040003:intron 50.0%
CTCAACCTCAAGAGGGTAAC+TGG + chr3.2:65056714-65056733 None:intergenic 50.0%
CTGGGTGAACTCTGGATTAC+CGG + chr3.2:65053129-65053148 None:intergenic 50.0%
GAATGGATCATGGCAACCTG+TGG - chr3.2:65052566-65052585 MS.gene040003:CDS 50.0%
GAGTACCAGTTACCCTCTTG+AGG - chr3.2:65056706-65056725 MS.gene040003:intron 50.0%
GATAGGTGGAATGCCCAAAG+AGG - chr3.2:65055502-65055521 MS.gene040003:CDS 50.0%
GCGGAAGGAAACTAGACTGT+TGG - chr3.2:65054581-65054600 MS.gene040003:CDS 50.0%
GTACAGCCTGAACGTTACGT+AGG - chr3.2:65053913-65053932 MS.gene040003:intron 50.0%
TCAAGAAAGGTCACGGTCAC+GGG + chr3.2:65053062-65053081 None:intergenic 50.0%
TGGGTGAACTCTGGATTACC+GGG + chr3.2:65053128-65053147 None:intergenic 50.0%
TTGAACCTGGAGAGGTTCGA+CGG + chr3.2:65055983-65056002 None:intergenic 50.0%
! TATTGCACGCGCTTTTCGAC+CGG - chr3.2:65057192-65057211 MS.gene040003:intron 50.0%
! TGCTCCAGCTTTTTACGACC+TGG - chr3.2:65052705-65052724 MS.gene040003:CDS 50.0%
!!! GCAGCTGTTTTGATCAGCCA+TGG + chr3.2:65056764-65056783 None:intergenic 50.0%
ACTAGAGCTCCCGCATATGC+AGG - chr3.2:65052902-65052921 MS.gene040003:CDS 55.0%
AGGACTAGAGGTCGTTTCCC+TGG + chr3.2:65055879-65055898 None:intergenic 55.0%
ATCCAACGCTGATGCCTGCA+AGG - chr3.2:65054488-65054507 MS.gene040003:CDS 55.0%
CGGTAATCCAGAGTTCACCC+AGG - chr3.2:65053127-65053146 MS.gene040003:CDS 55.0%
CGTCGAACTTGAACCTGGAG+AGG + chr3.2:65055991-65056010 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr3.2:65052903-65052922 MS.gene040003:CDS 55.0%
GCTTGCGACGTTCGAAACGT+AGG - chr3.2:65053887-65053906 MS.gene040003:intron 55.0%
GGGTGAACTCTGGATTACCG+GGG + chr3.2:65053127-65053146 None:intergenic 55.0%
TTCCTTGCAGGCATCAGCGT+TGG + chr3.2:65054493-65054512 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGACC+GGG - chr3.2:65057193-65057212 MS.gene040003:intron 55.0%
! GGTGTCGTCGAACTTGAACC+TGG + chr3.2:65055996-65056015 None:intergenic 55.0%
CATATGCAGGGTCCGGGAAG+GGG - chr3.2:65052915-65052934 MS.gene040003:CDS 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr3.2:65052915-65052934 None:intergenic 60.0%
CTTCGCTCCTGGGTGAACTC+TGG + chr3.2:65053137-65053156 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr3.2:65052914-65052933 MS.gene040003:CDS 60.0%
GTCACGGTCACGGGTAACCT+TGG + chr3.2:65053053-65053072 None:intergenic 60.0%
GTTACTGACGACCGGGTCGA+TGG - chr3.2:65057243-65057262 MS.gene040003:intron 60.0%
TCGACCGGGCCAGCAGAAAA+TGG - chr3.2:65057207-65057226 MS.gene040003:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr3.2:65052914-65052933 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3.2:65052930-65052949 None:intergenic 60.0%
! TGCGGGAGCTCTAGTACACC+AGG + chr3.2:65052897-65052916 None:intergenic 60.0%
CATGGCCGTCGAACCTCTCC+AGG - chr3.2:65055975-65055994 MS.gene040003:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr3.2:65052913-65052932 MS.gene040003:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3.2:65052928-65052947 MS.gene040003:CDS 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr3.2:65052909-65052928 MS.gene040003:CDS 65.0%
CTGGAGAGGTTCGACGGCCA+TGG + chr3.2:65055977-65055996 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr3.2:65052908-65052927 MS.gene040003:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 65051628 65057459 65051628 ID=MS.gene040003
chr3.2 mRNA 65051628 65057459 65051628 ID=MS.gene040003.t1;Parent=MS.gene040003
chr3.2 exon 65057402 65057459 65057402 ID=MS.gene040003.t1.exon1;Parent=MS.gene040003.t1
chr3.2 CDS 65057402 65057459 65057402 ID=cds.MS.gene040003.t1;Parent=MS.gene040003.t1
chr3.2 exon 65056293 65056537 65056293 ID=MS.gene040003.t1.exon2;Parent=MS.gene040003.t1
chr3.2 CDS 65056293 65056537 65056293 ID=cds.MS.gene040003.t1;Parent=MS.gene040003.t1
chr3.2 exon 65054359 65055759 65054359 ID=MS.gene040003.t1.exon3;Parent=MS.gene040003.t1
chr3.2 CDS 65054359 65055759 65054359 ID=cds.MS.gene040003.t1;Parent=MS.gene040003.t1
chr3.2 exon 65053924 65054070 65053924 ID=MS.gene040003.t1.exon4;Parent=MS.gene040003.t1
chr3.2 CDS 65053924 65054070 65053924 ID=cds.MS.gene040003.t1;Parent=MS.gene040003.t1
chr3.2 exon 65051628 65053580 65051628 ID=MS.gene040003.t1.exon5;Parent=MS.gene040003.t1
chr3.2 CDS 65051628 65053580 65051628 ID=cds.MS.gene040003.t1;Parent=MS.gene040003.t1
Gene Sequence

>MS.gene040003

ATGGCGCCTATAAAAAGGCATTTGCATCAATGGAAGCATCCATTTGATGCTAATTATCGTAAGCTTTTTTTTTTCCTTAATTTTATTACTATATATGCATGAGAAAGAAATAAAAAGAATAGCAAAATATGAAAAATCATCAATGGATTACAACATTGATTTTGTGATATTGAAAAGATTGTTATTCATTACCATGATGAATGCAACAAATGATATAGAGACTTGAATCCTCTTCAACCGGCTATAGATTGTTAGATTAAGAGAGATCGATGCAGCTGACTGCTTATAAAGTTAGCTGCAAAGGATTCACTTTGTATTTGTATACTTGATAAATTTGTTGGTTTTGTACATTATTAACTAAATTGTGAATTAACTAAGCTCTTCGAATTGTTAATAAGTTACTTAATCTTGATTATCAACATTTAAAATCATAGTCAATACAGTTGATTACATGATTAATGAATTATTCAATCTTGATTTAATTCAACATTTGTTGGTTTCCCTTCTAGGTTTGGTTTATGTCTCTCACATTTTTGTTATTTTTCATTTGACTTGGAGATGATTTTTGTTTTGCACACATAATTGAGATGTCAGTAATTCATAATTATAACTCTTTGCAACTCCAATTTTTTCTTAGAAAAACCATCCAATCTTGATATTTATTGTATATTCATTAACAAAACTCAACTAATAAGACATAAACCATGATTTTGAATGTGGCGTGCATGTACTTTCAATTCTGATCAATGTAATTGAAAATTAATACATTTTAATTACAGGACAACCTAGAACTACTATTTATTTTCTGTTGTAGCCTTGTAGAAACTAGTTAGAGCAGATTTCTATAACTTCATGTTCTCATTCATTAATATCTATAGATTTTTTACTATAGTTGCTTCCCCTAATTCTTGTTTCAAAACAGCATTTGAAGCAGTATTGAATGGATCATGGCAACCTGTGGAACTCTTAAAAATAGAGTCAGGAAAAACTACCTTACGTTTCATTGATACTGAACAAATTCAAAGCACTTTGTCATCAGATATTCGGATAAGATCAAGGAAAGCTACTTCATCTGATTGCTCCAGCTTTTTACGACCTGGAATTGATATATCTATGCTATTAGGCTATCGATACAATGATAATTCAGATCCATTTACGTCTATTCCAGTAAGTTCAAACTTTTTATTAAACTTCATTTCTTAGTAAACTGGTGTTTATATGCATTTATTTGTTGATCTTTAATTTCTTGATTAAAAAAAAGGGCAACCTGGTGTACTAGAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACGCAGCCTTACCCTGTTTTACACAAGAGGCTGTTTCCAAGACTTGAACCCGTGACCTTTCAGTCACATGACAACAACTTTACTAGTTGCGCCAAGGTTACCCGTGACCGTGACCTTTCTTGATATTTTTTTTTTATCTGAACCCTCCGATTTGTAAGGAACTAGCCCCGGTAATCCAGAGTTCACCCAGGAGCGAAGTTAAGTCTAGTCAATGATTGTTCTAGCCATAATTTGAACTTGGATTTTCCTGAATGATTTGTCCTTAACTGAATTAACCACTTGAAATAAATCACATTTGATACATGTTTAATTTCTTGATGTTGACTTACCAAACACTTGGCTTGATATTTATCTCTTTGTAAATTGTAGATGTGGATTGATGCAAGAATAAATTCTATACATAGACAGCCTCACAAATCCGATCAATGTTCATGTCAATTTTATGTTAACTTATACGATGATCAAGGTTCACTTGGTACAGAGGTAAAAACTCTTAATAAAGAGGTTAATGCAATTGAAATAGATCAAATTTTCATCCTCCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATACCTCTGAAATTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCATTATCACAATCTAGATTACTCGTTGGGAAATTTTCATCTGATCTTTCGTGGTTTGTAATTACATCTTTTTTAAAGAAGGTTTCATTCCATATAAGATCTGTGCAAAACAAGATTGTGTATCAAGTTATGGGGAATGATACTGATATTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAACTTAAAAAAGGAATCACTGGTACCTATTGTTTTTCAATTTGATGTATTTCATGATTATGATGGAGAAGAAGATGAAGCGCCACCAAAGTCATCAAATGAAGTTGAAGGCTTGCGACGTTCGAAACGTAGGAATGTACAGCCTGAACGTTACGTAGGCTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACGTGTCCCTACAAGAGAACAACTTATATGATAGAAGATGAAAACTCTTCTTCAGATTCAGAAGAGGATGGTGGTAAGAGTGATCAAAAGTTTAGTAAGGTGAATCATTGCAAAGCTATTAATGTGAGCACAAGGAACAAAAATTATGATGGTGATGGCAAGTTTAAGGTACATAAAACTGATGACATTTCTTCCAAATATCATTATTTGACTAATTATATTTCTTGTGCAAAGAAGAATGGTGCTGATGTGTTGAATTTGGAGTACGGCAATGAGCCTACAACAATATCAAGTGATGAAGAAGTTGATGGTAATGTTACTTTGAGAAATTATAATAGTTTCTTTAAAGAGAAGATAAAGAGGAAGAGACTTCATGTTGTGGATGATATGGATTTTGAAACCAAATGGGAAGGGATACATTTCAAAAAAGAAGCTCCAACAGAAAATTTTCATTCGAGTTATTTGTCTAACAGAAGTCATGTTCATGAAGAACAAGATCATAAAGGCGGTAGAACATCCAACGCTGATGCCTGCAAGGAAATAATAGATAGTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCTACTGTAAATGAGAAGCGGAAGGAAACTAGACTGTTGGAGAAAAAGGAAGAAGAAAAAGTATCGAAAAGCAATGATGAGGAAGAATATCCTGATGATTTGGATGCCTTGTGGGAAGAAATGAATACAGCTTTGACATCAAGTTATCTTCTTGATGGAACCGCGGTGTGTGTGACAATTTTTAGTATTAATTTTAAATATTTTCTTGAGTTTATTTTTGTTACACCGTTGGTGTAAAAAGTTTAAAACTGTCAGCAAATCACAACCAATTGTATGTGTGACTTTAAAAGTAACTATGATTGAAGTCAAACATTTTTAATGATGTGACAATTATGATTGGCTGACAGTCTACAGAGTCTTTACACTGGCGATGTTTATGAATTAAATTCTTTTTTTTTTTTGTTTTTGTCTTCTTTTATAAGGCTAAAGACTGATTCAGTTCAAATATAGCAGGGTTCAACTGCTGAGGTTGTAGCTGATACCAAGAAAGAATCCAGGGATAGTTGTGAACATGATTTTAGATTGGATGAAGAAATTGGAATCTACTGCCTTCAATGTGGATTTGTGAAAACCGCAATACGAGACATTTCTGAGCCATTTGTAAGTCAAATATAAAAGAATAACAAAAGTCTACATGTAATTTTAGTCCCTCATTTTGTTGGATATGTTGTCTACTGCAATGTGTAAATATCAGCAATAGTGTAGTGAAATTTGAACAAATCGCTATTGTTCTGCAATAAGCTATTTAGTACAAAATGCTGTCAAATAGCGGCGCTGTATGTTGCATAGCACAATTTTAACAAACTTCCTATTTTTCGTGATTCACGATTGACAACACTGTTCTGCTGATGTTAACTGTATTCTCCTTATTTGGTTAGATATTTTGTTTATTGCTTGCTCCAGTATGAATCTACCTGATAACTTAATTTATATATAATGATAGGTGGAATGCCCAAAGAGGTACAAAGAGGAGAAACAGTGCAGTGAAGAAAATAAGGAACATAAATCAGAGCCAAAAGTTGATGAAGATTATAATAATGATATGTTCTCGACTCATGCTACTGATCCTGATGAACCATTGACTAATGATATCGACAATGTTTGGGAATTGATTCCTGGACTTGAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCATAATATTGCTGGCTCTATGGAACCATCACTCATGGAAGAAAAATCCAACTCAAGTGGTGGCTGTGTTATATCACATGCTCCTGGAGCAGGAAAAACCTTTCTCATCATTTCTTTTCTTGTAAGTTACTTGAAGTTATTTCCAGGGAAACGACCTCTAGTCCTAGCTCCAAAAACCACACTCTACACGTGGCGAAAAGAGTTCAAAAAATGGAAGATTCCTGTGCCGGTTTATCTTATCCATGGCCGTCGAACCTCTCCAGGTTCAAGTTCGACGACACCAAAATCAATGATTCTTCCTGGATTTCCAAGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTCGCAAGATACAGAAGTGGCACTCACACCCTAGTGTTCTTGTCATGGGCTATACTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTCGCACACAGAAAATACATGGCCAAAGCATTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAGCTTCCAACAGAATTGAGAATATTACTCTCCGGCACATTGTTTCAGAACAATTTCGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTGTTCATGAAGTTCTACAAGAGTTAGATTCTAAATACCGAAGGAAAGGCGGAAAAATTGCGAAGAAAGAACGTCATTTGCTTGAGGCGCGCGCAAGAAAATTCTTCTTGAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTTTATATGTGCTGCGAAAAATCACTTCCGGTTTTATTGATGTGTACGACAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATCTATACATTGCTCATGAATACGTCCGATGAACAGCATGAGATTGTACAGAAACTACAGAGGAAAATGGCTGAGAGTACCAGTTACCCTCTTGAGGTTGAGCTTTTGATAACACTTGGATCAATACATCCATGGCTGATCAAAACAGCTGCATCATGTGCAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAAACAAGCAAATTTGATTTGAGAAAAGGTTCCAAAGTAAGATTTGTTTTGAGCCTAATCTCACGAGTGGTGAAAAATGAAAAGGTTCTTATATTTTGTCACAACCTTGCACCTGTGAGATTCTTAATAGAGTTATTTGAGAAATATTTTCAGTGGCAAAATGGTAAAGAGATTATGGTACTAACGGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCAAAGCAGCGGTTCAAAGATACTTCTTGCTTCAATCAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGACTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGACCGGGCCAGCAGAAAATGGTTTATGTGTATCAGTTACTGACGACCGGGTCGATGGAAGAAGATAAGTATAGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTTAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCACATGATTATGAAGAATGAAAAGGCTTCAACAATCTAA
Protein sequence

>MS.gene040003.t1

MAPIKRHLHQWKHPFDANYPFEAVLNGSWQPVELLKIESGKTTLRFIDTEQIQSTLSSDIRIRSRKATSSDCSSFLRPGIDISMLLGYRYNDNSDPFTSIPMWIDARINSIHRQPHKSDQCSCQFYVNLYDDQGSLGTEVKTLNKEVNAIEIDQIFILQRLQHNTCEGLLKENDTSEIKPYRWDSSEDCSSLSQSRLLVGKFSSDLSWFVITSFLKKVSFHIRSVQNKIVYQVMGNDTDIISPWLINVVNFNLKKESLVPIVFQFDVFHDYDGEEDEAPPKSSNEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTCPYKRTTYMIEDENSSSDSEEDGGKSDQKFSKVNHCKAINVSTRNKNYDGDGKFKVHKTDDISSKYHYLTNYISCAKKNGADVLNLEYGNEPTTISSDEEVDGNVTLRNYNSFFKEKIKRKRLHVVDDMDFETKWEGIHFKKEAPTENFHSSYLSNRSHVHEEQDHKGGRTSNADACKEIIDSYMKNFDSLPTEEEPTVNEKRKETRLLEKKEEEKVSKSNDEEEYPDDLDALWEEMNTALTSSYLLDGTAGSTAEVVADTKKESRDSCEHDFRLDEEIGIYCLQCGFVKTAIRDISEPFVECPKRYKEEKQCSEENKEHKSEPKVDEDYNNDMFSTHATDPDEPLTNDIDNVWELIPGLEEKMHEHQKKAFEFLWHNIAGSMEPSLMEEKSNSSGGCVISHAPGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWRKEFKKWKIPVPVYLIHGRRTSPGSSSTTPKSMILPGFPRPSSDVKHVLDCLRKIQKWHSHPSVLVMGYTSFLQLMRSKDTKFAHRKYMAKALRESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLQELDSKYRRKGGKIAKKERHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSGFIDVYDSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQRKMAESTSYPLEVELLITLGSIHPWLIKTAASCATKFFAEEELKKLETSKFDLRKGSKVRFVLSLISRVVKNEKVLIFCHNLAPVRFLIELFEKYFQWQNGKEIMVLTGELDLFERGKVIDKFEDQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIMKNEKASTI