Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040211.t1 | XP_013448091.1 | 87.4 | 500 | 23 | 2 | 1 | 461 | 1 | 499 | 8.80E-181 | 643.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040211.t1 | Q6NQK2 | 53.0 | 219 | 94 | 3 | 3 | 219 | 4 | 215 | 1.3e-60 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040211.t1 | A0A072TZ22 | 87.4 | 500 | 23 | 2 | 1 | 461 | 1 | 499 | 6.3e-181 | 643.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene040211.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040211.t1 | MTR_7g033320 | 86.853 | 502 | 26 | 2 | 1 | 463 | 1 | 501 | 0.0 | 859 |
| MS.gene040211.t1 | MTR_5g053430 | 37.320 | 485 | 214 | 13 | 5 | 456 | 6 | 433 | 2.29e-91 | 285 |
| MS.gene040211.t1 | MTR_5g053430 | 37.320 | 485 | 217 | 13 | 5 | 456 | 6 | 436 | 3.27e-91 | 284 |
| MS.gene040211.t1 | MTR_1g093680 | 50.584 | 257 | 120 | 3 | 5 | 256 | 8 | 262 | 3.66e-87 | 275 |
| MS.gene040211.t1 | MTR_2g014680 | 50.679 | 221 | 98 | 4 | 35 | 247 | 31 | 248 | 1.45e-66 | 216 |
| MS.gene040211.t1 | MTR_4g088245 | 56.522 | 184 | 73 | 3 | 36 | 215 | 47 | 227 | 2.89e-65 | 213 |
| MS.gene040211.t1 | MTR_4g078875 | 50.485 | 206 | 99 | 1 | 34 | 236 | 24 | 229 | 3.81e-63 | 206 |
| MS.gene040211.t1 | MTR_8g069160 | 56.667 | 180 | 71 | 3 | 36 | 211 | 47 | 223 | 5.37e-63 | 205 |
| MS.gene040211.t1 | MTR_8g102240 | 53.646 | 192 | 80 | 4 | 30 | 215 | 25 | 213 | 3.30e-61 | 207 |
| MS.gene040211.t1 | MTR_8g102240 | 53.646 | 192 | 80 | 4 | 30 | 215 | 25 | 213 | 3.37e-61 | 207 |
| MS.gene040211.t1 | MTR_2g090735 | 49.756 | 205 | 99 | 2 | 34 | 235 | 25 | 228 | 1.95e-56 | 189 |
| MS.gene040211.t1 | MTR_1g093670 | 45.370 | 216 | 98 | 3 | 38 | 249 | 6 | 205 | 6.27e-55 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040211.t1 | AT3G01600 | 53.138 | 239 | 105 | 2 | 1 | 239 | 1 | 232 | 3.24e-84 | 263 |
| MS.gene040211.t1 | AT5G14490 | 47.241 | 290 | 145 | 4 | 1 | 285 | 1 | 287 | 1.06e-83 | 261 |
| MS.gene040211.t1 | AT5G14490 | 52.282 | 241 | 112 | 3 | 1 | 241 | 1 | 238 | 4.64e-83 | 258 |
| MS.gene040211.t1 | AT5G14490 | 46.897 | 290 | 146 | 4 | 1 | 285 | 4 | 290 | 5.24e-83 | 260 |
| MS.gene040211.t1 | AT5G14490 | 46.897 | 290 | 146 | 4 | 1 | 285 | 4 | 290 | 5.46e-83 | 260 |
| MS.gene040211.t1 | AT1G25580 | 36.247 | 469 | 249 | 12 | 2 | 453 | 3 | 438 | 3.68e-81 | 258 |
| MS.gene040211.t1 | AT4G29230 | 52.332 | 193 | 82 | 3 | 30 | 215 | 26 | 215 | 2.27e-63 | 212 |
| MS.gene040211.t1 | AT4G29230 | 52.332 | 193 | 82 | 3 | 30 | 215 | 26 | 215 | 6.84e-63 | 212 |
| MS.gene040211.t1 | AT4G29230 | 52.332 | 193 | 81 | 3 | 30 | 215 | 26 | 214 | 7.99e-63 | 212 |
| MS.gene040211.t1 | AT1G28470 | 49.515 | 206 | 91 | 4 | 36 | 233 | 53 | 253 | 2.52e-61 | 202 |
| MS.gene040211.t1 | AT4G28500 | 50.000 | 188 | 92 | 1 | 34 | 219 | 36 | 223 | 5.40e-61 | 201 |
| MS.gene040211.t1 | AT5G56620 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 1.46e-56 | 193 |
| MS.gene040211.t1 | AT5G56620 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 1.73e-56 | 192 |
| MS.gene040211.t1 | AT5G56620 | 49.495 | 198 | 84 | 6 | 30 | 215 | 20 | 213 | 3.99e-56 | 191 |
Find 110 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGGTGGATTTGGAGGATT+TGG | 0.165293 | 7.1:+64569486 | None:intergenic |
| TGCCCCACAATTTGATATTC+AGG | 0.253843 | 7.1:-64568852 | MS.gene040211:CDS |
| TTTCCTGTACGCGGTGGATT+TGG | 0.270486 | 7.1:+64569477 | None:intergenic |
| TCCTTCTGATGTGGAAATAT+TGG | 0.291101 | 7.1:-64571185 | MS.gene040211:CDS |
| AAATCTCGTCACACAATAAA+AGG | 0.305784 | 7.1:+64568612 | None:intergenic |
| TGCCCTGCAATCTGATATTC+AGG | 0.315476 | 7.1:-64568780 | MS.gene040211:CDS |
| TCCATGTTCTATTATAGCTT+TGG | 0.323257 | 7.1:+64569746 | None:intergenic |
| GATTCTGAATATCAGTTTGC+AGG | 0.324041 | 7.1:+64568714 | None:intergenic |
| GGATTTGGGTTTGGAGTCCT+TGG | 0.334390 | 7.1:+64569501 | None:intergenic |
| TGCCATGCAATCCGATATTC+AGG | 0.334930 | 7.1:-64568924 | MS.gene040211:CDS |
| AACTGCTGTCCTGGATAAAC+TGG | 0.338862 | 7.1:-64568483 | MS.gene040211:CDS |
| CCAGTCAGATTTGTAGGACT+TGG | 0.338941 | 7.1:+64569668 | None:intergenic |
| ACACATCCTGAAAATCTTCC+AGG | 0.345121 | 7.1:-64571064 | MS.gene040211:intron |
| TCCTCCAGATTATGATCTTT+CGG | 0.348663 | 7.1:-64568450 | MS.gene040211:intron |
| CACATACAACTTTGCATGGT+TGG | 0.357647 | 7.1:-64568891 | MS.gene040211:CDS |
| TTCATGCAGAATTTGACATT+TGG | 0.373477 | 7.1:-64568342 | MS.gene040211:intron |
| GCAAACTGATATTCAGAATC+AGG | 0.380819 | 7.1:-64568711 | MS.gene040211:CDS |
| ACAATGAATGCATATAGTTC+TGG | 0.388883 | 7.1:-64569843 | MS.gene040211:CDS |
| TGCATGGCATTTGATTCTAC+AGG | 0.390220 | 7.1:+64568938 | None:intergenic |
| AATAGAACATGGAGAACATA+AGG | 0.393301 | 7.1:-64569736 | MS.gene040211:CDS |
| GGATTTGGAGGATTTGGGTT+TGG | 0.408606 | 7.1:+64569492 | None:intergenic |
| CCTTGTTCTCCTTCCAATGT+TGG | 0.412278 | 7.1:+64571097 | None:intergenic |
| CAGTCTTGTGCCAGCGTACA+TGG | 0.417800 | 7.1:+64569775 | None:intergenic |
| TGTCCTGGATAAACTGGAAT+TGG | 0.418051 | 7.1:-64568477 | MS.gene040211:CDS |
| GATCCTGAATATCAGATTGC+AGG | 0.419901 | 7.1:+64568777 | None:intergenic |
| TCTATTTACTGATTCTCAAT+TGG | 0.425400 | 7.1:-64568576 | MS.gene040211:CDS |
| TGAAACTTCAACTGCTGTCC+TGG | 0.427456 | 7.1:-64568492 | MS.gene040211:CDS |
| AACAACTCTGCATGGTTGGC+TGG | 0.431062 | 7.1:-64568680 | MS.gene040211:CDS |
| CTGTGTAGGTTTCTAGTGAA+TGG | 0.431292 | 7.1:-64571237 | MS.gene040211:intron |
| ATCGCAGGCTATGGAAAATT+CGG | 0.436700 | 7.1:-64568654 | MS.gene040211:CDS |
| TTCAACTCTGCATGGTTGGC+TGG | 0.436796 | 7.1:-64568815 | MS.gene040211:CDS |
| GCGGTGGATTTGGAGGATTT+GGG | 0.438699 | 7.1:+64569487 | None:intergenic |
| CACATTCAACTCTGCATGGT+TGG | 0.439730 | 7.1:-64568819 | MS.gene040211:CDS |
| ACAATTTGATATTCAGGATC+AGG | 0.442249 | 7.1:-64568846 | MS.gene040211:CDS |
| GACAGTATCCTTGGTTTGAT+AGG | 0.443883 | 7.1:-64568309 | MS.gene040211:CDS |
| AAAATGCATCAGTACCATCT+AGG | 0.444254 | 7.1:-64569645 | MS.gene040211:CDS |
| CAGGGCAGCTTGCGATTCAC+CGG | 0.446866 | 7.1:+64568733 | None:intergenic |
| AACCACGATGATGAATCTTT+CGG | 0.451588 | 7.1:+64569808 | None:intergenic |
| CCTGTACGCGGTGGATTTGG+AGG | 0.456268 | 7.1:+64569480 | None:intergenic |
| CACAAACAACTCTGCATGGT+TGG | 0.457938 | 7.1:-64568684 | MS.gene040211:CDS |
| TCTATACGAGAATGACAGTT+TGG | 0.458285 | 7.1:+64571784 | None:intergenic |
| GCAATCCGATATTCAGGATC+AGG | 0.460300 | 7.1:-64568918 | MS.gene040211:CDS |
| TACAACTTTGCATGGTTGGC+TGG | 0.462824 | 7.1:-64568887 | MS.gene040211:CDS |
| CGTCTTCATCAGTCCCTAGA+TGG | 0.465866 | 7.1:+64569631 | None:intergenic |
| GTTCGCGATGTTATACTGTC+AGG | 0.467320 | 7.1:+64569528 | None:intergenic |
| GACAACTCTGCATGGTTGGC+CGG | 0.472780 | 7.1:-64568752 | MS.gene040211:CDS |
| TTGTTACACACCTCTGCAAA+TGG | 0.484050 | 7.1:+64569414 | None:intergenic |
| CTTACCGAAAGATCATAATC+TGG | 0.486131 | 7.1:+64568446 | None:intergenic |
| TAAGGGATTTAAGAAGATCA+TGG | 0.488299 | 7.1:-64569718 | MS.gene040211:CDS |
| CTCTTCAGCTGATCAGATCA+AGG | 0.488697 | 7.1:-64571830 | MS.gene040211:CDS |
| GTATCCTTGGTTTGATAGGC+GGG | 0.489513 | 7.1:-64568305 | MS.gene040211:CDS |
| CATGTACGCTGGCACAAGAC+TGG | 0.493768 | 7.1:-64569774 | MS.gene040211:CDS |
| GATCCTGAATATCAAATTGT+GGG | 0.494451 | 7.1:+64568849 | None:intergenic |
| CTTTGATTTCAATAATGGCT+AGG | 0.494505 | 7.1:-64572872 | None:intergenic |
| GGCTGGTGAATCGCAGGCTA+TGG | 0.495395 | 7.1:-64568663 | MS.gene040211:CDS |
| CGAGGAGTTCATACCAACAT+TGG | 0.496522 | 7.1:-64571110 | MS.gene040211:CDS |
| TCTCAAGACGACAGTATCCT+TGG | 0.497503 | 7.1:-64568318 | MS.gene040211:CDS |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.504683 | 7.1:-64568804 | MS.gene040211:CDS |
| CCAAGTCCTACAAATCTGAC+TGG | 0.505991 | 7.1:-64569668 | MS.gene040211:CDS |
| CCTCCAAATCCACCGCGTAC+AGG | 0.506008 | 7.1:-64569480 | MS.gene040211:CDS |
| GGAAATATTGGAGCATTTAG+CGG | 0.509677 | 7.1:-64571173 | MS.gene040211:CDS |
| TATCCAATTCCAGTTTATCC+AGG | 0.513615 | 7.1:+64568474 | None:intergenic |
| ATAGAACATGGAGAACATAA+GGG | 0.517209 | 7.1:-64569735 | MS.gene040211:CDS |
| AAAACACATACAACTTTGCA+TGG | 0.525483 | 7.1:-64568895 | MS.gene040211:CDS |
| ACTGATGAAGACGAGAAGAA+TGG | 0.528383 | 7.1:-64569621 | MS.gene040211:CDS |
| TTTATGCCGAGGGGAAAGCC+AGG | 0.532538 | 7.1:+64571214 | None:intergenic |
| TTAGCGGCTAAATGTGGTGT+GGG | 0.532638 | 7.1:-64571157 | MS.gene040211:CDS |
| CAATAAAAGGTCATCCAAGC+CGG | 0.532658 | 7.1:+64568625 | None:intergenic |
| CACTACGAAAACAAAATGAC+AGG | 0.538985 | 7.1:-64568533 | MS.gene040211:CDS |
| TCCAATATTTCCACATCAGA+AGG | 0.541653 | 7.1:+64571184 | None:intergenic |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.543839 | 7.1:-64568876 | MS.gene040211:CDS |
| TAGGTTTCTAGTGAATGGCC+TGG | 0.544927 | 7.1:-64571232 | MS.gene040211:CDS |
| AAAGTTTGATCCTTCTGATG+TGG | 0.545313 | 7.1:-64571194 | MS.gene040211:CDS |
| GAATGGCTAATTAACATAAG+AGG | 0.545620 | 7.1:-64571883 | MS.gene040211:CDS |
| TCACGACAACTCTGCATGGT+TGG | 0.547089 | 7.1:-64568756 | MS.gene040211:CDS |
| ATGGAAAATTCGGATTATGC+CGG | 0.551046 | 7.1:-64568644 | MS.gene040211:CDS |
| AAATTCGGATTATGCCGGCT+TGG | 0.554157 | 7.1:-64568639 | MS.gene040211:CDS |
| TTCACTGTTGCCATTTGCAG+AGG | 0.555067 | 7.1:-64569424 | MS.gene040211:intron |
| TGATCCTGAATATCAAATTG+TGG | 0.555124 | 7.1:+64568848 | None:intergenic |
| GGTTTGATAGGCGGGCTATG+AGG | 0.556981 | 7.1:-64568297 | None:intergenic |
| AGTATCCTTGGTTTGATAGG+CGG | 0.559174 | 7.1:-64568306 | MS.gene040211:CDS |
| AAATGCATCAGTACCATCTA+GGG | 0.560385 | 7.1:-64569644 | MS.gene040211:CDS |
| ATGGTTGGCTGGTGAATCGC+AGG | 0.562987 | 7.1:-64568669 | MS.gene040211:CDS |
| CCAACATTGGAAGGAGAACA+AGG | 0.565627 | 7.1:-64571097 | MS.gene040211:CDS |
| ATCCTGAATATCGGATTGCA+TGG | 0.580983 | 7.1:+64568922 | None:intergenic |
| GAATGGCCTGGCTTTCCCCT+CGG | 0.583639 | 7.1:-64571220 | MS.gene040211:CDS |
| ATTCTGAATATCAGTTTGCA+GGG | 0.585363 | 7.1:+64568715 | None:intergenic |
| ATCCTGAATATCAGATTGCA+GGG | 0.587600 | 7.1:+64568778 | None:intergenic |
| AGGATCAAACTTTATGCCGA+GGG | 0.591558 | 7.1:+64571204 | None:intergenic |
| GAGTTCATACCAACATTGGA+AGG | 0.612629 | 7.1:-64571106 | MS.gene040211:CDS |
| AAGGATCAAACTTTATGCCG+AGG | 0.614282 | 7.1:+64571203 | None:intergenic |
| GAGCATTTAGCGGCTAAATG+TGG | 0.621733 | 7.1:-64571163 | MS.gene040211:CDS |
| ACCAAAGCTATAATAGAACA+TGG | 0.626362 | 7.1:-64569747 | MS.gene040211:CDS |
| ACAACACATTCAACTCTGCA+TGG | 0.632912 | 7.1:-64568823 | MS.gene040211:CDS |
| GCATGGCATTTGATTCTACA+GGG | 0.633182 | 7.1:+64568939 | None:intergenic |
| ATAACACAAACAACTCTGCA+TGG | 0.636499 | 7.1:-64568688 | MS.gene040211:CDS |
| TTTAGCGGCTAAATGTGGTG+TGG | 0.639141 | 7.1:-64571158 | MS.gene040211:CDS |
| TAACATCGCGAACAAGTCCA+AGG | 0.642484 | 7.1:-64569518 | MS.gene040211:CDS |
| CGACTGAAGACCATGTACGC+TGG | 0.649864 | 7.1:-64569785 | MS.gene040211:CDS |
| ACCGAAAGATCATAATCTGG+AGG | 0.651380 | 7.1:+64568449 | None:intergenic |
| ACAGGAAAATGTGTTGACAA+TGG | 0.656459 | 7.1:-64569462 | MS.gene040211:CDS |
| AACTCCTCGATAAACATGTG+AGG | 0.657869 | 7.1:+64571124 | None:intergenic |
| AGGATCACGACAACTCTGCA+TGG | 0.659418 | 7.1:-64568760 | MS.gene040211:CDS |
| GCTGATCAGATCAAGGATTG+CGG | 0.663553 | 7.1:-64571823 | MS.gene040211:CDS |
| ATCCTGAATATCAAATTGTG+GGG | 0.667524 | 7.1:+64568850 | None:intergenic |
| CGCCGAAAGATTCATCATCG+TGG | 0.681320 | 7.1:-64569810 | MS.gene040211:CDS |
| AAAGCCTCACATGTTTATCG+AGG | 0.687510 | 7.1:-64571128 | MS.gene040211:CDS |
| TAGCGGCTAAATGTGGTGTG+GGG | 0.695454 | 7.1:-64571156 | MS.gene040211:CDS |
| ATAGCCCGCCTATCAAACCA+AGG | 0.702047 | 7.1:+64568301 | None:intergenic |
| GGATCAAACTTTATGCCGAG+GGG | 0.712709 | 7.1:+64571205 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTATTAATTTTTTTAC+TGG | - | chr7.1:64571877-64571896 | MS.gene040211:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTCTTTTGA+GGG | - | chr7.1:64568408-64568427 | MS.gene040211:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTCTTTTG+AGG | - | chr7.1:64568407-64568426 | MS.gene040211:intron | 10.0% |
| !! | AAAATCTAAAAAATGAAGTA+TGG | + | chr7.1:64572761-64572780 | None:intergenic | 15.0% |
| !! | AAATAAAGGAATTTACAATT+TGG | - | chr7.1:64568713-64568732 | MS.gene040211:CDS | 15.0% |
| !! | AAATCTAAAAAATGAAGTAT+GGG | + | chr7.1:64572760-64572779 | None:intergenic | 15.0% |
| !! | AATAAAGGAATTTACAATTT+GGG | - | chr7.1:64568714-64568733 | MS.gene040211:CDS | 15.0% |
| !! | ACTCAAAATGAATAAAAAAA+AGG | + | chr7.1:64569637-64569656 | None:intergenic | 15.0% |
| !! | ATTATAAGAGTAATAAACAT+AGG | + | chr7.1:64570852-64570871 | None:intergenic | 15.0% |
| !! | CTCAAAATGAATAAAAAAAA+GGG | + | chr7.1:64569636-64569655 | None:intergenic | 15.0% |
| !!! | AACTTTAAATTTTATGAACT+AGG | - | chr7.1:64572182-64572201 | MS.gene040211:intron | 15.0% |
| !!! | TATGATTATTATTGACTTTT+GGG | - | chr7.1:64568615-64568634 | MS.gene040211:CDS | 15.0% |
| !!! | TATTATCTGTTTTGTTTTTT+AGG | - | chr7.1:64571251-64571270 | MS.gene040211:intron | 15.0% |
| !!! | TGTTTTTATGTAGTATAAAT+TGG | + | chr7.1:64570133-64570152 | None:intergenic | 15.0% |
| !!! | TTATGATTATTATTGACTTT+TGG | - | chr7.1:64568614-64568633 | MS.gene040211:CDS | 15.0% |
| !!! | TTTTATACACAACAAAAAAT+GGG | + | chr7.1:64568376-64568395 | None:intergenic | 15.0% |
| !!! | TTTTTATACACAACAAAAAA+TGG | + | chr7.1:64568377-64568396 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTCTTTTGAG+GGG | - | chr7.1:64568409-64568428 | MS.gene040211:intron | 15.0% |
| !! | AAAAATCTTGAAAGTGATAA+GGG | - | chr7.1:64570553-64570572 | MS.gene040211:intron | 20.0% |
| !! | ATAAAGGAATTTACAATTTG+GGG | - | chr7.1:64568715-64568734 | MS.gene040211:CDS | 20.0% |
| !! | ATAAGACATTATCTATTGTT+TGG | - | chr7.1:64570465-64570484 | MS.gene040211:intron | 20.0% |
| !! | CATATGAAAGGTTTAAATAA+AGG | - | chr7.1:64568867-64568886 | MS.gene040211:CDS | 20.0% |
| !! | CCTTAACTTATAAAATATGA+TGG | + | chr7.1:64570708-64570727 | None:intergenic | 20.0% |
| !! | TCTAATCATTAAGAAGAATT+TGG | - | chr7.1:64570403-64570422 | MS.gene040211:intron | 20.0% |
| !! | TGAATGCATATAGTAAATAA+GGG | - | chr7.1:64571151-64571170 | MS.gene040211:CDS | 20.0% |
| !! | TTATTTAAACCTTTCATATG+TGG | + | chr7.1:64568867-64568886 | None:intergenic | 20.0% |
| !! | TTTATGTAGTATAAATTGGA+CGG | + | chr7.1:64570129-64570148 | None:intergenic | 20.0% |
| !!! | ACAATGAACTAGATTTTTTT+GGG | + | chr7.1:64570946-64570965 | None:intergenic | 20.0% |
| !!! | AGTAAAAACAGTGTTATTTT+TGG | + | chr7.1:64571847-64571866 | None:intergenic | 20.0% |
| !!! | ATATATGGAATGATATTTTG+TGG | - | chr7.1:64568688-64568707 | MS.gene040211:CDS | 20.0% |
| !!! | ATGATTATTATTGACTTTTG+GGG | - | chr7.1:64568616-64568635 | MS.gene040211:CDS | 20.0% |
| !!! | ATTTTTTTTCTCCTTTGTTA+GGG | - | chr7.1:64568479-64568498 | MS.gene040211:CDS | 20.0% |
| !!! | CCATCATATTTTATAAGTTA+AGG | - | chr7.1:64570705-64570724 | MS.gene040211:intron | 20.0% |
| !!! | GTTAGTTATAGATTTTATGT+TGG | - | chr7.1:64569065-64569084 | MS.gene040211:intron | 20.0% |
| !!! | TATATGGAATGATATTTTGT+GGG | - | chr7.1:64568689-64568708 | MS.gene040211:CDS | 20.0% |
| !!! | TATCAATGAACTAGATTTTT+GGG | + | chr7.1:64570898-64570917 | None:intergenic | 20.0% |
| !!! | TATTTTTTTTCTCCTTTGTT+AGG | - | chr7.1:64568478-64568497 | MS.gene040211:CDS | 20.0% |
| !!! | TTATCAATGAACTAGATTTT+TGG | + | chr7.1:64570899-64570918 | None:intergenic | 20.0% |
| !!! | TTTTGGCTTTTATCTATATA+TGG | - | chr7.1:64568673-64568692 | MS.gene040211:CDS | 20.0% |
| ! | AAACAGAGAAAAGTGAAAAA+AGG | - | chr7.1:64571922-64571941 | MS.gene040211:intron | 25.0% |
| ! | AAATGAACTGAATCTTGATT+AGG | + | chr7.1:64570820-64570839 | None:intergenic | 25.0% |
| ! | AGTTACAAATTACATGTGAA+GGG | - | chr7.1:64570360-64570379 | MS.gene040211:intron | 25.0% |
| ! | ATAAATAACAACCAAAGCAT+TGG | + | chr7.1:64570521-64570540 | None:intergenic | 25.0% |
| ! | ATGAATAAAAAAAAGGGCAA+AGG | + | chr7.1:64569630-64569649 | None:intergenic | 25.0% |
| ! | ATTAGGTACAGTTATTCATA+AGG | + | chr7.1:64570492-64570511 | None:intergenic | 25.0% |
| ! | ATTCTTGAAAAAGTTTAGCA+TGG | - | chr7.1:64569847-64569866 | MS.gene040211:CDS | 25.0% |
| ! | ATTTGTTTATTTGTCTAGCA+GGG | - | chr7.1:64569252-64569271 | MS.gene040211:intron | 25.0% |
| ! | CAAAAATCTTGAAAGTGATA+AGG | - | chr7.1:64570552-64570571 | MS.gene040211:intron | 25.0% |
| ! | GAATGCATATAGTAAATAAG+GGG | - | chr7.1:64571152-64571171 | MS.gene040211:CDS | 25.0% |
| ! | GTGAATGCATATAGTAAATA+AGG | - | chr7.1:64571150-64571169 | MS.gene040211:CDS | 25.0% |
| ! | TAAAGGAATTTACAATTTGG+GGG | - | chr7.1:64568716-64568735 | MS.gene040211:CDS | 25.0% |
| ! | TAGTTACAAATTACATGTGA+AGG | - | chr7.1:64570359-64570378 | MS.gene040211:intron | 25.0% |
| ! | TATAATGTAACTGACATTCT+TGG | - | chr7.1:64570744-64570763 | MS.gene040211:intron | 25.0% |
| ! | TATTTGTTTATTTGTCTAGC+AGG | - | chr7.1:64569251-64569270 | MS.gene040211:intron | 25.0% |
| ! | TGAATAAAAAAAAGGGCAAA+GGG | + | chr7.1:64569629-64569648 | None:intergenic | 25.0% |
| ! | TGTAATTAAGATTTGAAGAC+AGG | - | chr7.1:64571954-64571973 | MS.gene040211:intron | 25.0% |
| ! | TTCTTGAAAAAGTTTAGCAT+GGG | - | chr7.1:64569848-64569867 | MS.gene040211:CDS | 25.0% |
| !! | AAAATCTAGTTCATTGTGTT+AGG | - | chr7.1:64570949-64570968 | MS.gene040211:intron | 25.0% |
| !! | AAATCTAGTTCATTGTGTTA+GGG | - | chr7.1:64570950-64570969 | MS.gene040211:intron | 25.0% |
| !! | AAGGTGGAAATGATTTATTT+TGG | - | chr7.1:64568656-64568675 | MS.gene040211:CDS | 25.0% |
| !! | CACATGTAATTTGTAACTAT+GGG | + | chr7.1:64570358-64570377 | None:intergenic | 25.0% |
| !! | GATATTTTGTGGGTAAATAA+AGG | - | chr7.1:64568699-64568718 | MS.gene040211:CDS | 25.0% |
| !! | TCACATGTAATTTGTAACTA+TGG | + | chr7.1:64570359-64570378 | None:intergenic | 25.0% |
| !!! | AACTACTTTTATCTTCTATG+AGG | + | chr7.1:64572029-64572048 | None:intergenic | 25.0% |
| !!! | AATCTAGTTCATTGATAATG+TGG | - | chr7.1:64570901-64570920 | MS.gene040211:intron | 25.0% |
| !!! | ATCTAGTTCATTGATAATGT+GGG | - | chr7.1:64570902-64570921 | MS.gene040211:intron | 25.0% |
| !!! | CACAATGAACTAGATTTTTT+TGG | + | chr7.1:64570947-64570966 | None:intergenic | 25.0% |
| !!! | TATGAACTGACTGTTTTAAA+TGG | - | chr7.1:64570307-64570326 | MS.gene040211:intron | 25.0% |
| !!! | TCTATTTACTGATTCTCAAT+TGG | - | chr7.1:64572581-64572600 | MS.gene040211:intron | 25.0% |
| AAAACACATACAACTTTGCA+TGG | - | chr7.1:64572262-64572281 | MS.gene040211:intron | 30.0% | |
| AAAAGAAAAATGCAGGGTAT+AGG | + | chr7.1:64569767-64569786 | None:intergenic | 30.0% | |
| AAATCTCGTCACACAATAAA+AGG | + | chr7.1:64572548-64572567 | None:intergenic | 30.0% | |
| AAGCCTCTAATTATGGTTAT+TGG | - | chr7.1:64572731-64572750 | MS.gene040211:intron | 30.0% | |
| AATAGAACATGGAGAACATA+AGG | - | chr7.1:64571421-64571440 | MS.gene040211:intron | 30.0% | |
| ACAATGAATGCATATAGTTC+TGG | - | chr7.1:64571314-64571333 | MS.gene040211:intron | 30.0% | |
| ACAATTTGATATTCAGGATC+AGG | - | chr7.1:64572311-64572330 | MS.gene040211:intron | 30.0% | |
| ACCAAAGCTATAATAGAACA+TGG | - | chr7.1:64571410-64571429 | MS.gene040211:intron | 30.0% | |
| AGAAAACCACCAAAAATACA+AGG | + | chr7.1:64569019-64569038 | None:intergenic | 30.0% | |
| AGCTCAGTAATCAAATACAA+TGG | + | chr7.1:64570169-64570188 | None:intergenic | 30.0% | |
| ATAGAACATGGAGAACATAA+GGG | - | chr7.1:64571422-64571441 | MS.gene040211:intron | 30.0% | |
| ATCAAATACAATGGACAAAG+TGG | + | chr7.1:64570160-64570179 | None:intergenic | 30.0% | |
| ATCCTGAATATCAAATTGTG+GGG | + | chr7.1:64572310-64572329 | None:intergenic | 30.0% | |
| ATTCTGAATATCAGTTTGCA+GGG | + | chr7.1:64572445-64572464 | None:intergenic | 30.0% | |
| ATTGTATTTGATTACTGAGC+TGG | - | chr7.1:64570168-64570187 | MS.gene040211:intron | 30.0% | |
| ATTTACAATTTGGGGGTTTA+TGG | - | chr7.1:64568723-64568742 | MS.gene040211:CDS | 30.0% | |
| CAACCAATAACCATAATTAG+AGG | + | chr7.1:64572737-64572756 | None:intergenic | 30.0% | |
| CATTAGACTAATATGCAATG+CGG | + | chr7.1:64570613-64570632 | None:intergenic | 30.0% | |
| GAAAAATGAAGAGAAAGCAA+TGG | - | chr7.1:64571598-64571617 | MS.gene040211:intron | 30.0% | |
| GAAAACCACCAAAAATACAA+GGG | + | chr7.1:64569018-64569037 | None:intergenic | 30.0% | |
| GAATGGCTAATTAACATAAG+AGG | - | chr7.1:64569274-64569293 | MS.gene040211:intron | 30.0% | |
| GATCCTGAATATCAAATTGT+GGG | + | chr7.1:64572311-64572330 | None:intergenic | 30.0% | |
| TAAGATTTGAAGACAGGAAT+TGG | - | chr7.1:64571960-64571979 | MS.gene040211:intron | 30.0% | |
| TAAGGGATTTAAGAAGATCA+TGG | - | chr7.1:64571439-64571458 | MS.gene040211:intron | 30.0% | |
| TCCAACAAAAGAAAAATGCA+GGG | + | chr7.1:64569773-64569792 | None:intergenic | 30.0% | |
| TCCATGTTCTATTATAGCTT+TGG | + | chr7.1:64571414-64571433 | None:intergenic | 30.0% | |
| TGATCCTGAATATCAAATTG+TGG | + | chr7.1:64572312-64572331 | None:intergenic | 30.0% | |
| TTCATGCAGAATTTGACATT+TGG | - | chr7.1:64572815-64572834 | MS.gene040211:intron | 30.0% | |
| TTCCAACAAAAGAAAAATGC+AGG | + | chr7.1:64569774-64569793 | None:intergenic | 30.0% | |
| TTCTATGAGGTGGAATAATA+AGG | + | chr7.1:64572016-64572035 | None:intergenic | 30.0% | |
| TTTACAATTTGGGGGTTTAT+GGG | - | chr7.1:64568724-64568743 | MS.gene040211:CDS | 30.0% | |
| ! | AAAATATGATGGAGTACTTC+TGG | + | chr7.1:64570697-64570716 | None:intergenic | 30.0% |
| ! | AAATTTGGCCCTTGTATTTT+TGG | - | chr7.1:64569007-64569026 | MS.gene040211:intron | 30.0% |
| ! | TACTTTTATCTTCTATGAGG+TGG | + | chr7.1:64572026-64572045 | None:intergenic | 30.0% |
| ! | TCAAGTTTTTAATGTGCTTG+TGG | - | chr7.1:64569806-64569825 | MS.gene040211:CDS | 30.0% |
| !! | ATGACATTTGCTGATCTTTT+AGG | - | chr7.1:64571084-64571103 | MS.gene040211:CDS | 30.0% |
| !! | TTTTAGGTGCTAAGAAACAT+GGG | - | chr7.1:64571100-64571119 | MS.gene040211:CDS | 30.0% |
| !! | TTTTAGGTGCTAAGAAAGAT+GGG | - | chr7.1:64571267-64571286 | MS.gene040211:intron | 30.0% |
| !!! | CGTCATATTCATTTTGAGTT+CGG | - | chr7.1:64569430-64569449 | MS.gene040211:CDS | 30.0% |
| !!! | GATTTTTTTGGGATTGAGTT+AGG | + | chr7.1:64570935-64570954 | None:intergenic | 30.0% |
| !!! | GTCATATTCATTTTGAGTTC+GGG | - | chr7.1:64569431-64569450 | MS.gene040211:CDS | 30.0% |
| !!! | TCATATTCATTTTGAGTTCG+GGG | - | chr7.1:64569432-64569451 | MS.gene040211:CDS | 30.0% |
| !!! | TTTTTAGGTGCTAAGAAAGA+TGG | - | chr7.1:64571266-64571285 | MS.gene040211:intron | 30.0% |
| !!! | TTTTTTCTTTTGAGGGGTTT+TGG | - | chr7.1:64568415-64568434 | MS.gene040211:intron | 30.0% |
| AAAATGCAGGGTATAGGAAT+TGG | + | chr7.1:64569761-64569780 | None:intergenic | 35.0% | |
| AAAATGCATCAGTACCATCT+AGG | - | chr7.1:64571512-64571531 | MS.gene040211:intron | 35.0% | |
| AAAGTTTGATCCTTCTGATG+TGG | - | chr7.1:64569963-64569982 | MS.gene040211:intron | 35.0% | |
| AAATGCATCAGTACCATCTA+GGG | - | chr7.1:64571513-64571532 | MS.gene040211:intron | 35.0% | |
| AACCACGATGATGAATCTTT+CGG | + | chr7.1:64571352-64571371 | None:intergenic | 35.0% | |
| AACTGTTCAAACCCTAACAA+AGG | + | chr7.1:64568493-64568512 | None:intergenic | 35.0% | |
| AATGTGGTATTGTGTAGTCA+AGG | - | chr7.1:64568570-64568589 | MS.gene040211:CDS | 35.0% | |
| AGAACATACACATCCTGAAA+TGG | - | chr7.1:64570208-64570227 | MS.gene040211:intron | 35.0% | |
| AGATAGAACAGAAACCAAAC+TGG | - | chr7.1:64571990-64572009 | MS.gene040211:intron | 35.0% | |
| AGCTGGTAAAATGAATTGAG+TGG | - | chr7.1:64570185-64570204 | MS.gene040211:intron | 35.0% | |
| AGTTGAACTATCCAGTTTCT+CGG | - | chr7.1:64568538-64568557 | MS.gene040211:CDS | 35.0% | |
| ATAACACAAACAACTCTGCA+TGG | - | chr7.1:64572469-64572488 | MS.gene040211:intron | 35.0% | |
| ATCCTGAATATCAGATTGCA+GGG | + | chr7.1:64572382-64572401 | None:intergenic | 35.0% | |
| ATCTTGAAAGTGATAAGGGA+TGG | - | chr7.1:64570557-64570576 | MS.gene040211:intron | 35.0% | |
| ATGGAAAATTCGGATTATGC+CGG | - | chr7.1:64572513-64572532 | MS.gene040211:intron | 35.0% | |
| ATGTGGTATTGTGTAGTCAA+GGG | - | chr7.1:64568571-64568590 | MS.gene040211:CDS | 35.0% | |
| CAAAAACATTCCTCCATTTC+AGG | + | chr7.1:64570224-64570243 | None:intergenic | 35.0% | |
| CAAGAAATACATGTCATGCT+CGG | - | chr7.1:64570978-64570997 | MS.gene040211:intron | 35.0% | |
| CACTACGAAAACAAAATGAC+AGG | - | chr7.1:64572624-64572643 | MS.gene040211:intron | 35.0% | |
| CTAATGATAGACCAATGCTT+TGG | - | chr7.1:64570507-64570526 | MS.gene040211:intron | 35.0% | |
| CTATACCAAAGATTGCTACA+CGG | - | chr7.1:64568974-64568993 | MS.gene040211:intron | 35.0% | |
| CTTACCGAAAGATCATAATC+TGG | + | chr7.1:64572714-64572733 | None:intergenic | 35.0% | |
| GAATCAGTTGTATTGCAATG+TGG | - | chr7.1:64568944-64568963 | MS.gene040211:CDS | 35.0% | |
| GACATTGACAATGCAGAAAA+TGG | - | chr7.1:64568763-64568782 | MS.gene040211:CDS | 35.0% | |
| GATAATGTTGCAGCATCAAT+TGG | - | chr7.1:64568802-64568821 | MS.gene040211:CDS | 35.0% | |
| GATTCTGAATATCAGTTTGC+AGG | + | chr7.1:64572446-64572465 | None:intergenic | 35.0% | |
| GCAAACTGATATTCAGAATC+AGG | - | chr7.1:64572446-64572465 | MS.gene040211:intron | 35.0% | |
| GCAAAGTCAATAGAAACATG+AGG | + | chr7.1:64569731-64569750 | None:intergenic | 35.0% | |
| TAAGGGGTTTATGAAGATCA+TGG | - | chr7.1:64571168-64571187 | MS.gene040211:CDS | 35.0% | |
| TATCCAATTCCAGTTTATCC+AGG | + | chr7.1:64572686-64572705 | None:intergenic | 35.0% | |
| TCAAAATATGCACCAGAAAC+AGG | - | chr7.1:64569671-64569690 | MS.gene040211:CDS | 35.0% | |
| TCCAATATTTCCACATCAGA+AGG | + | chr7.1:64569976-64569995 | None:intergenic | 35.0% | |
| TCCTCCAGATTATGATCTTT+CGG | - | chr7.1:64572707-64572726 | MS.gene040211:intron | 35.0% | |
| TCCTTCTGATGTGGAAATAT+TGG | - | chr7.1:64569972-64569991 | MS.gene040211:intron | 35.0% | |
| TCTATACGAGAATGACAGTT+TGG | + | chr7.1:64569376-64569395 | None:intergenic | 35.0% | |
| TGATGCTGCAACATTATCAT+CGG | + | chr7.1:64568800-64568819 | None:intergenic | 35.0% | |
| TGCTAGAGTTATGATATTGC+TGG | + | chr7.1:64570770-64570789 | None:intergenic | 35.0% | |
| TGTAGCAATCTTTGGTATAG+TGG | + | chr7.1:64568974-64568993 | None:intergenic | 35.0% | |
| TTTAGGTGCTAAGAAACATG+GGG | - | chr7.1:64571101-64571120 | MS.gene040211:CDS | 35.0% | |
| TTTATTTGTCTAGCAGGGAA+TGG | - | chr7.1:64569257-64569276 | MS.gene040211:intron | 35.0% | |
| TTTCGGTAAGCCTCTAATTA+TGG | - | chr7.1:64572724-64572743 | MS.gene040211:intron | 35.0% | |
| ! | AACTGATTCATCCTCAATCA+TGG | + | chr7.1:64568933-64568952 | None:intergenic | 35.0% |
| ! | ACAGGAAAATGTGTTGACAA+TGG | - | chr7.1:64571695-64571714 | MS.gene040211:intron | 35.0% |
| ! | ACCCTGCATTTTTCTTTTGT+TGG | - | chr7.1:64569769-64569788 | MS.gene040211:CDS | 35.0% |
| ! | CATTTTCCAGTCAGATTTGT+AGG | + | chr7.1:64571498-64571517 | None:intergenic | 35.0% |
| ! | GCTTCAAATTTTCCTGTTTC+TGG | + | chr7.1:64569686-64569705 | None:intergenic | 35.0% |
| ! | GGAAATATTGGAGCATTTAG+CGG | - | chr7.1:64569984-64570003 | MS.gene040211:intron | 35.0% |
| ! | GTAACAATCTATGCTGCTTA+TGG | - | chr7.1:64571759-64571778 | MS.gene040211:intron | 35.0% |
| ! | GTTTTCCTGATCCTGAATAT+CGG | + | chr7.1:64572247-64572266 | None:intergenic | 35.0% |
| ! | TGATTAGGTTCTAGTCTGAA+GGG | + | chr7.1:64570805-64570824 | None:intergenic | 35.0% |
| ! | TTGATTAGGTTCTAGTCTGA+AGG | + | chr7.1:64570806-64570825 | None:intergenic | 35.0% |
| !! | CAAAGCATTGGTCTATCATT+AGG | + | chr7.1:64570509-64570528 | None:intergenic | 35.0% |
| !! | CAATGACCTCTAAAATATCG+CGG | + | chr7.1:64568900-64568919 | None:intergenic | 35.0% |
| !! | CGATATTTTAGAGGTCATTG+TGG | - | chr7.1:64568900-64568919 | MS.gene040211:CDS | 35.0% |
| !! | CTTTTAGGTGCTAAGAAACA+TGG | - | chr7.1:64571099-64571118 | MS.gene040211:CDS | 35.0% |
| !! | TAGATTTTTGGGCTTGAGTT+AGG | + | chr7.1:64570887-64570906 | None:intergenic | 35.0% |
| !!! | AATGTTGTTTTTGCCTGTGT+AGG | - | chr7.1:64569906-64569925 | MS.gene040211:intron | 35.0% |
| !!! | ATATTCATTTTGAGTTCGGG+GGG | - | chr7.1:64569434-64569453 | MS.gene040211:CDS | 35.0% |
| !!! | CATATTCATTTTGAGTTCGG+GGG | - | chr7.1:64569433-64569452 | MS.gene040211:CDS | 35.0% |
| !!! | TTTTGTTTTCGTAGTGAGTG+AGG | + | chr7.1:64572620-64572639 | None:intergenic | 35.0% |
| AAAGCCTCACATGTTTATCG+AGG | - | chr7.1:64570029-64570048 | MS.gene040211:intron | 40.0% | |
| AACAGCCTCTTGTGTTAAAC+AGG | - | chr7.1:64569523-64569542 | MS.gene040211:CDS | 40.0% | |
| AACTCCTCGATAAACATGTG+AGG | + | chr7.1:64570036-64570055 | None:intergenic | 40.0% | |
| AAGGATCAAACTTTATGCCG+AGG | + | chr7.1:64569957-64569976 | None:intergenic | 40.0% | |
| AAGGGCCAAATTTCAGATTG+CGG | + | chr7.1:64569000-64569019 | None:intergenic | 40.0% | |
| ACAACACATTCAACTCTGCA+TGG | - | chr7.1:64572334-64572353 | MS.gene040211:intron | 40.0% | |
| ACACATCCTGAAAATCTTCC+AGG | - | chr7.1:64570093-64570112 | MS.gene040211:intron | 40.0% | |
| ACAGCCTCTTGTGTTAAACA+GGG | - | chr7.1:64569524-64569543 | MS.gene040211:CDS | 40.0% | |
| ACATACACATCCTGAAATGG+AGG | - | chr7.1:64570211-64570230 | MS.gene040211:intron | 40.0% | |
| ACCGAAAGATCATAATCTGG+AGG | + | chr7.1:64572711-64572730 | None:intergenic | 40.0% | |
| ACTCTTTGTTAATGGGACTG+AGG | - | chr7.1:64571002-64571021 | MS.gene040211:intron | 40.0% | |
| ACTGATGAAGACGAGAAGAA+TGG | - | chr7.1:64571536-64571555 | MS.gene040211:intron | 40.0% | |
| AGGATCAAACTTTATGCCGA+GGG | + | chr7.1:64569956-64569975 | None:intergenic | 40.0% | |
| ATCCTGAATATCGGATTGCA+TGG | + | chr7.1:64572238-64572257 | None:intergenic | 40.0% | |
| ATCGCAGGCTATGGAAAATT+CGG | - | chr7.1:64572503-64572522 | MS.gene040211:intron | 40.0% | |
| ATCTCAGCACCACATATGAA+AGG | - | chr7.1:64568855-64568874 | MS.gene040211:CDS | 40.0% | |
| CAATAAAAGGTCATCCAAGC+CGG | + | chr7.1:64572535-64572554 | None:intergenic | 40.0% | |
| CACATACAACTTTGCATGGT+TGG | - | chr7.1:64572266-64572285 | MS.gene040211:intron | 40.0% | |
| CACATAGCATGTCAGTAACT+TGG | + | chr7.1:64572785-64572804 | None:intergenic | 40.0% | |
| CATTCACTAGAAACCTACAC+AGG | + | chr7.1:64569922-64569941 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr7.1:64569555-64569574 | MS.gene040211:CDS | 40.0% | |
| CTCTTGTGTTAAACAGGGTA+AGG | - | chr7.1:64569529-64569548 | MS.gene040211:CDS | 40.0% | |
| CTTACCCTGTTTAACACAAG+AGG | + | chr7.1:64569531-64569550 | None:intergenic | 40.0% | |
| GAGAAACTGGATAGTTCAAC+TGG | + | chr7.1:64568539-64568558 | None:intergenic | 40.0% | |
| GAGTTCATACCAACATTGGA+AGG | - | chr7.1:64570051-64570070 | MS.gene040211:intron | 40.0% | |
| GATCCTGAATATCAGATTGC+AGG | + | chr7.1:64572383-64572402 | None:intergenic | 40.0% | |
| GCATGGCATTTGATTCTACA+GGG | + | chr7.1:64572221-64572240 | None:intergenic | 40.0% | |
| GCTCGGTACTCTTTGTTAAT+GGG | - | chr7.1:64570995-64571014 | MS.gene040211:intron | 40.0% | |
| GGGAAACTAAAGCAAACTAC+AGG | - | chr7.1:64570380-64570399 | MS.gene040211:intron | 40.0% | |
| GGTTTGTGATGGTCAATGAA+AGG | - | chr7.1:64568637-64568656 | MS.gene040211:CDS | 40.0% | |
| GTATTGAAGAACTGATGCAC+TGG | + | chr7.1:64569113-64569132 | None:intergenic | 40.0% | |
| GTGGAATAATAAGGCCAGTT+TGG | + | chr7.1:64572007-64572026 | None:intergenic | 40.0% | |
| GTTGAACTATCCAGTTTCTC+GGG | - | chr7.1:64568539-64568558 | MS.gene040211:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr7.1:64569480-64569499 | MS.gene040211:CDS | 40.0% | |
| TGCATGGCATTTGATTCTAC+AGG | + | chr7.1:64572222-64572241 | None:intergenic | 40.0% | |
| TGCCCCACAATTTGATATTC+AGG | - | chr7.1:64572305-64572324 | MS.gene040211:intron | 40.0% | |
| TGCTCGGTACTCTTTGTTAA+TGG | - | chr7.1:64570994-64571013 | MS.gene040211:intron | 40.0% | |
| TGTCCTGGATAAACTGGAAT+TGG | - | chr7.1:64572680-64572699 | MS.gene040211:intron | 40.0% | |
| TTAGGTGCTAAGAAACATGG+GGG | - | chr7.1:64571102-64571121 | MS.gene040211:CDS | 40.0% | |
| TTGTGATGGTCAATGAAAGG+TGG | - | chr7.1:64568640-64568659 | MS.gene040211:CDS | 40.0% | |
| TTGTTACACACCTCTGCAAA+TGG | + | chr7.1:64571746-64571765 | None:intergenic | 40.0% | |
| ! | AGTATCCTTGGTTTGATAGG+CGG | - | chr7.1:64572851-64572870 | MS.gene040211:intron | 40.0% |
| ! | ATTAGGTTCTAGTCTGAAGG+GGG | + | chr7.1:64570803-64570822 | None:intergenic | 40.0% |
| ! | GACAGTATCCTTGGTTTGAT+AGG | - | chr7.1:64572848-64572867 | MS.gene040211:intron | 40.0% |
| ! | GATTAGGTTCTAGTCTGAAG+GGG | + | chr7.1:64570804-64570823 | None:intergenic | 40.0% |
| ! | TCAACACATTTTCCTGTACG+CGG | + | chr7.1:64571692-64571711 | None:intergenic | 40.0% |
| ! | TTCTCACCTGGAAGATTTTC+AGG | + | chr7.1:64570102-64570121 | None:intergenic | 40.0% |
| !! | ATGTGACCGCGATATTTTAG+AGG | - | chr7.1:64568891-64568910 | MS.gene040211:CDS | 40.0% |
| !! | CTGTGTAGGTTTCTAGTGAA+TGG | - | chr7.1:64569920-64569939 | MS.gene040211:intron | 40.0% |
| !! | GTGGCTTTAAACCATGATTG+AGG | - | chr7.1:64568919-64568938 | MS.gene040211:CDS | 40.0% |
| !! | GTTCAACTGGTTTGAGCTAA+CGG | + | chr7.1:64568526-64568545 | None:intergenic | 40.0% |
| !! | TGAGGGGTTTTGGTGATTTT+TGG | - | chr7.1:64568425-64568444 | MS.gene040211:intron | 40.0% |
| !!! | TATTCATTTTGAGTTCGGGG+GGG | - | chr7.1:64569435-64569454 | MS.gene040211:CDS | 40.0% |
| !!! | TTGACTTTTGGGGTTTGTGA+TGG | - | chr7.1:64568626-64568645 | MS.gene040211:CDS | 40.0% |
| !!! | TTTGGCCCTTGTATTTTTGG+TGG | - | chr7.1:64569010-64569029 | MS.gene040211:intron | 40.0% |
| AACTGCTGTCCTGGATAAAC+TGG | - | chr7.1:64572674-64572693 | MS.gene040211:intron | 45.0% | |
| CACAAACAACTCTGCATGGT+TGG | - | chr7.1:64572473-64572492 | MS.gene040211:intron | 45.0% | |
| CACATTCAACTCTGCATGGT+TGG | - | chr7.1:64572338-64572357 | MS.gene040211:intron | 45.0% | |
| CCAACATTGGAAGGAGAACA+AGG | - | chr7.1:64570060-64570079 | MS.gene040211:intron | 45.0% | |
| CCAAGTCCTACAAATCTGAC+TGG | - | chr7.1:64571489-64571508 | MS.gene040211:intron | 45.0% | |
| CCAGTCAGATTTGTAGGACT+TGG | + | chr7.1:64571492-64571511 | None:intergenic | 45.0% | |
| CCTTGTTCTCCTTCCAATGT+TGG | + | chr7.1:64570063-64570082 | None:intergenic | 45.0% | |
| CGAGGAGTTCATACCAACAT+TGG | - | chr7.1:64570047-64570066 | MS.gene040211:intron | 45.0% | |
| CTATCCAGTTTCTCGGGTTT+CGG | - | chr7.1:64568545-64568564 | MS.gene040211:CDS | 45.0% | |
| CTCTTCAGCTGATCAGATCA+AGG | - | chr7.1:64569327-64569346 | MS.gene040211:intron | 45.0% | |
| GAGCATTTAGCGGCTAAATG+TGG | - | chr7.1:64569994-64570013 | MS.gene040211:intron | 45.0% | |
| GCAATCCGATATTCAGGATC+AGG | - | chr7.1:64572239-64572258 | MS.gene040211:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr7.1:64569554-64569573 | MS.gene040211:CDS | 45.0% | |
| GCTGATCAGATCAAGGATTG+CGG | - | chr7.1:64569334-64569353 | MS.gene040211:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7.1:64569551-64569570 | MS.gene040211:CDS | 45.0% | |
| GCTTAAAAAGACGTCTGCTG+AGG | + | chr7.1:64569161-64569180 | None:intergenic | 45.0% | |
| GGATCAAACTTTATGCCGAG+GGG | + | chr7.1:64569955-64569974 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr7.1:64569486-64569505 | MS.gene040211:CDS | 45.0% | |
| GTTCGCGATGTTATACTGTC+AGG | + | chr7.1:64571632-64571651 | None:intergenic | 45.0% | |
| TAACATCGCGAACAAGTCCA+AGG | - | chr7.1:64571639-64571658 | MS.gene040211:intron | 45.0% | |
| TACAACTTTGCATGGTTGGC+TGG | - | chr7.1:64572270-64572289 | MS.gene040211:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr7.1:64569487-64569506 | MS.gene040211:CDS | 45.0% | |
| TCTCAAGACGACAGTATCCT+TGG | - | chr7.1:64572839-64572858 | MS.gene040211:intron | 45.0% | |
| TGAAACTTCAACTGCTGTCC+TGG | - | chr7.1:64572665-64572684 | MS.gene040211:intron | 45.0% | |
| TGCCATGCAATCCGATATTC+AGG | - | chr7.1:64572233-64572252 | MS.gene040211:intron | 45.0% | |
| TGCCCTGCAATCTGATATTC+AGG | - | chr7.1:64572377-64572396 | MS.gene040211:intron | 45.0% | |
| TTAGCGGCTAAATGTGGTGT+GGG | - | chr7.1:64570000-64570019 | MS.gene040211:intron | 45.0% | |
| TTTAGCGGCTAAATGTGGTG+TGG | - | chr7.1:64569999-64570018 | MS.gene040211:intron | 45.0% | |
| ! | AAATTCGGATTATGCCGGCT+TGG | - | chr7.1:64572518-64572537 | MS.gene040211:intron | 45.0% |
| ! | GGATTTGGAGGATTTGGGTT+TGG | + | chr7.1:64571668-64571687 | None:intergenic | 45.0% |
| ! | GTATCCTTGGTTTGATAGGC+GGG | - | chr7.1:64572852-64572871 | MS.gene040211:intron | 45.0% |
| ! | TTCACTGTTGCCATTTGCAG+AGG | - | chr7.1:64571733-64571752 | MS.gene040211:intron | 45.0% |
| !! | TAGGTTTCTAGTGAATGGCC+TGG | - | chr7.1:64569925-64569944 | MS.gene040211:intron | 45.0% |
| AAAAAGGGCAAAGGGCAACC+CGG | + | chr7.1:64569621-64569640 | None:intergenic | 50.0% | |
| AACAACTCTGCATGGTTGGC+TGG | - | chr7.1:64572477-64572496 | MS.gene040211:intron | 50.0% | |
| AAGGGATGGTCTCTAGTCTG+TGG | - | chr7.1:64570571-64570590 | MS.gene040211:intron | 50.0% | |
| AAGGTCACGGGTTCAAGTCT+TGG | - | chr7.1:64569499-64569518 | MS.gene040211:CDS | 50.0% | |
| AGGATCACGACAACTCTGCA+TGG | - | chr7.1:64572397-64572416 | MS.gene040211:intron | 50.0% | |
| ATAGCCCGCCTATCAAACCA+AGG | + | chr7.1:64572859-64572878 | None:intergenic | 50.0% | |
| ATGGTCTCTAGTCTGTGGAG+TGG | - | chr7.1:64570576-64570595 | MS.gene040211:intron | 50.0% | |
| CGCCGAAAGATTCATCATCG+TGG | - | chr7.1:64571347-64571366 | MS.gene040211:intron | 50.0% | |
| CGTCTTCATCAGTCCCTAGA+TGG | + | chr7.1:64571529-64571548 | None:intergenic | 50.0% | |
| CTTCTGCATACAGCACACAG+TGG | - | chr7.1:64570641-64570660 | MS.gene040211:intron | 50.0% | |
| GTTCTAGTCTGAAGGGGGAA+CGG | + | chr7.1:64570798-64570817 | None:intergenic | 50.0% | |
| TAGCGGCTAAATGTGGTGTG+GGG | - | chr7.1:64570001-64570020 | MS.gene040211:intron | 50.0% | |
| TCACGACAACTCTGCATGGT+TGG | - | chr7.1:64572401-64572420 | MS.gene040211:intron | 50.0% | |
| TGGTCTCTAGTCTGTGGAGT+GGG | - | chr7.1:64570577-64570596 | MS.gene040211:intron | 50.0% | |
| TTCAACTCTGCATGGTTGGC+TGG | - | chr7.1:64572342-64572361 | MS.gene040211:intron | 50.0% | |
| TTCTCCGAAACCCGAGAAAC+TGG | + | chr7.1:64568552-64568571 | None:intergenic | 50.0% | |
| TTCTCGGGTTTCGGAGAATG+TGG | - | chr7.1:64568554-64568573 | MS.gene040211:CDS | 50.0% | |
| TTGGACGGAGAATTCTCACC+TGG | + | chr7.1:64570114-64570133 | None:intergenic | 50.0% | |
| ! | ACACATTTTCCTGTACGCGG+TGG | + | chr7.1:64571689-64571708 | None:intergenic | 50.0% |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | - | chr7.1:64572281-64572300 | MS.gene040211:intron | 50.0% |
| ! | CACGGCCGCAATCTGAAATT+TGG | - | chr7.1:64568992-64569011 | MS.gene040211:intron | 50.0% |
| ! | GCGGTGGATTTGGAGGATTT+GGG | + | chr7.1:64571673-64571692 | None:intergenic | 50.0% |
| ! | GGATTTGGGTTTGGAGTCCT+TGG | + | chr7.1:64571659-64571678 | None:intergenic | 50.0% |
| ! | GTGTAGTCAAGGGTGTGACA+GGG | - | chr7.1:64568581-64568600 | MS.gene040211:CDS | 50.0% |
| ! | TGTGTAGTCAAGGGTGTGAC+AGG | - | chr7.1:64568580-64568599 | MS.gene040211:CDS | 50.0% |
| ! | TTTCCTGTACGCGGTGGATT+TGG | + | chr7.1:64571683-64571702 | None:intergenic | 50.0% |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr7.1:64569595-64569614 | None:intergenic | 55.0% | |
| CATGTACGCTGGCACAAGAC+TGG | - | chr7.1:64571383-64571402 | MS.gene040211:intron | 55.0% | |
| CGACTGAAGACCATGTACGC+TGG | - | chr7.1:64571372-64571391 | MS.gene040211:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr7.1:64569594-64569613 | None:intergenic | 55.0% | |
| GACAACTCTGCATGGTTGGC+CGG | - | chr7.1:64572405-64572424 | MS.gene040211:intron | 55.0% | |
| TGAGTTCGGGGGGGTAACTT+TGG | - | chr7.1:64569444-64569463 | MS.gene040211:CDS | 55.0% | |
| TGCGGCCGTGTAGCAATCTT+TGG | + | chr7.1:64568982-64569001 | None:intergenic | 55.0% | |
| TTTATGCCGAGGGGAAAGCC+AGG | + | chr7.1:64569946-64569965 | None:intergenic | 55.0% | |
| ! | ATGGTTGGCTGGTGAATCGC+AGG | - | chr7.1:64572488-64572507 | MS.gene040211:intron | 55.0% |
| ! | CAGTCTTGTGCCAGCGTACA+TGG | + | chr7.1:64571385-64571404 | None:intergenic | 55.0% |
| ! | CGCGGTGGATTTGGAGGATT+TGG | + | chr7.1:64571674-64571693 | None:intergenic | 55.0% |
| CAGGGCAGCTTGCGATTCAC+CGG | + | chr7.1:64572427-64572446 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr7.1:64569582-64569601 | None:intergenic | 60.0% | |
| CCTCCAAATCCACCGCGTAC+AGG | - | chr7.1:64571677-64571696 | MS.gene040211:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr7.1:64569582-64569601 | MS.gene040211:CDS | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr7.1:64569583-64569602 | None:intergenic | 60.0% | |
| GGCTGGTGAATCGCAGGCTA+TGG | - | chr7.1:64572494-64572513 | MS.gene040211:intron | 60.0% | |
| GGGGGTAACTTTGGCGCAAC+TGG | - | chr7.1:64569453-64569472 | MS.gene040211:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr7.1:64569583-64569602 | MS.gene040211:CDS | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr7.1:64569599-64569618 | MS.gene040211:CDS | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7.1:64569567-64569586 | MS.gene040211:CDS | 60.0% |
| ! | CCTGTACGCGGTGGATTTGG+AGG | + | chr7.1:64571680-64571699 | None:intergenic | 60.0% |
| ! | GAATGGCCTGGCTTTCCCCT+CGG | - | chr7.1:64569937-64569956 | MS.gene040211:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr7.1:64569584-64569603 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7.1:64569569-64569588 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr7.1:64569588-64569607 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr7.1:64569589-64569608 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr7.1:64569600-64569619 | MS.gene040211:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 64568299 | 64572880 | 64568299 | ID=MS.gene040211 |
| chr7.1 | mRNA | 64568299 | 64572880 | 64568299 | ID=MS.gene040211.t1;Parent=MS.gene040211 |
| chr7.1 | exon | 64572873 | 64572880 | 64572873 | ID=MS.gene040211.t1.exon1;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64572873 | 64572880 | 64572873 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| chr7.1 | exon | 64571774 | 64571906 | 64571774 | ID=MS.gene040211.t1.exon2;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64571774 | 64571906 | 64571774 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| chr7.1 | exon | 64571065 | 64571251 | 64571065 | ID=MS.gene040211.t1.exon3;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64571065 | 64571251 | 64571065 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| chr7.1 | exon | 64569425 | 64569906 | 64569425 | ID=MS.gene040211.t1.exon4;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64569425 | 64569906 | 64569425 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| chr7.1 | exon | 64568451 | 64568975 | 64568451 | ID=MS.gene040211.t1.exon5;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64568451 | 64568975 | 64568451 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| chr7.1 | exon | 64568299 | 64568355 | 64568299 | ID=MS.gene040211.t1.exon6;Parent=MS.gene040211.t1 |
| chr7.1 | CDS | 64568299 | 64568355 | 64568299 | ID=cds.MS.gene040211.t1;Parent=MS.gene040211.t1 |
| Gene Sequence |
| Protein sequence |
