Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040551.t1 | XP_003596151.2 | 90.4 | 312 | 29 | 1 | 1 | 311 | 1 | 312 | 4.70E-162 | 580.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040551.t1 | Q9SK55 | 49.2 | 301 | 122 | 10 | 3 | 303 | 1 | 270 | 1.1e-66 | 255.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040551.t1 | G7IGZ8 | 90.4 | 312 | 29 | 1 | 1 | 311 | 1 | 312 | 3.4e-162 | 580.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene040551.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040551.t1 | MTR_2g068880 | 92.308 | 312 | 23 | 1 | 1 | 311 | 1 | 312 | 0.0 | 607 |
MS.gene040551.t1 | MTR_2g068920 | 80.128 | 312 | 40 | 4 | 1 | 311 | 1 | 291 | 0.0 | 512 |
MS.gene040551.t1 | MTR_5g090970 | 53.061 | 294 | 127 | 7 | 18 | 307 | 14 | 300 | 2.25e-97 | 290 |
MS.gene040551.t1 | MTR_5g090970 | 52.381 | 294 | 128 | 7 | 18 | 307 | 14 | 299 | 4.96e-96 | 286 |
MS.gene040551.t1 | MTR_5g040420 | 51.653 | 242 | 97 | 8 | 19 | 249 | 11 | 243 | 2.49e-74 | 233 |
MS.gene040551.t1 | MTR_8g467490 | 59.239 | 184 | 67 | 5 | 20 | 200 | 12 | 190 | 1.07e-72 | 229 |
MS.gene040551.t1 | MTR_6g011860 | 59.412 | 170 | 51 | 4 | 23 | 186 | 16 | 173 | 3.30e-67 | 215 |
MS.gene040551.t1 | MTR_4g134460 | 50.888 | 169 | 66 | 4 | 18 | 186 | 50 | 201 | 1.08e-50 | 173 |
MS.gene040551.t1 | MTR_2g080010 | 46.512 | 172 | 81 | 4 | 24 | 191 | 17 | 181 | 1.60e-49 | 168 |
MS.gene040551.t1 | MTR_7g085220 | 47.929 | 169 | 75 | 5 | 24 | 187 | 10 | 170 | 2.32e-49 | 167 |
MS.gene040551.t1 | MTR_5g012080 | 42.654 | 211 | 96 | 6 | 21 | 223 | 7 | 200 | 3.05e-49 | 167 |
MS.gene040551.t1 | MTR_2g079990 | 50.289 | 173 | 70 | 4 | 24 | 196 | 18 | 174 | 5.85e-49 | 167 |
MS.gene040551.t1 | MTR_8g059170 | 52.299 | 174 | 63 | 6 | 24 | 194 | 16 | 172 | 1.38e-48 | 165 |
MS.gene040551.t1 | MTR_3g088110 | 53.374 | 163 | 62 | 5 | 24 | 186 | 9 | 157 | 1.79e-48 | 164 |
MS.gene040551.t1 | MTR_5g041940 | 50.000 | 164 | 68 | 4 | 24 | 186 | 5 | 155 | 5.20e-48 | 162 |
MS.gene040551.t1 | MTR_8g094580 | 46.354 | 192 | 90 | 6 | 24 | 215 | 9 | 187 | 6.42e-48 | 162 |
MS.gene040551.t1 | MTR_4g036030 | 46.199 | 171 | 72 | 4 | 21 | 189 | 7 | 159 | 7.72e-48 | 164 |
MS.gene040551.t1 | MTR_4g089135 | 47.191 | 178 | 79 | 4 | 24 | 189 | 17 | 191 | 1.11e-47 | 163 |
MS.gene040551.t1 | MTR_4g101680 | 46.448 | 183 | 76 | 6 | 21 | 199 | 7 | 171 | 1.21e-47 | 164 |
MS.gene040551.t1 | MTR_4g081870 | 49.091 | 165 | 68 | 4 | 24 | 186 | 11 | 161 | 1.66e-47 | 160 |
MS.gene040551.t1 | MTR_2157s0010 | 45.783 | 166 | 82 | 4 | 24 | 187 | 10 | 169 | 2.87e-47 | 160 |
MS.gene040551.t1 | MTR_7g100990 | 40.580 | 207 | 106 | 5 | 24 | 230 | 13 | 202 | 4.84e-47 | 161 |
MS.gene040551.t1 | MTR_2g064090 | 47.590 | 166 | 72 | 4 | 24 | 188 | 8 | 159 | 4.84e-47 | 162 |
MS.gene040551.t1 | MTR_2g079990 | 45.789 | 190 | 81 | 5 | 24 | 196 | 18 | 202 | 6.19e-47 | 162 |
MS.gene040551.t1 | MTR_6g477900 | 37.778 | 225 | 108 | 5 | 24 | 242 | 8 | 206 | 4.44e-46 | 156 |
MS.gene040551.t1 | MTR_5g021710 | 41.379 | 203 | 99 | 4 | 18 | 218 | 5 | 189 | 4.95e-46 | 159 |
MS.gene040551.t1 | MTR_3g435150 | 45.455 | 187 | 84 | 5 | 9 | 192 | 1 | 172 | 5.48e-46 | 157 |
MS.gene040551.t1 | MTR_8g024480 | 44.828 | 174 | 87 | 4 | 15 | 186 | 9 | 175 | 1.54e-45 | 160 |
MS.gene040551.t1 | MTR_2g093810 | 45.087 | 173 | 84 | 5 | 24 | 196 | 16 | 177 | 4.44e-45 | 156 |
MS.gene040551.t1 | MTR_3g096920 | 40.367 | 218 | 115 | 7 | 24 | 240 | 9 | 212 | 5.99e-45 | 154 |
MS.gene040551.t1 | MTR_4g108760 | 44.944 | 178 | 81 | 5 | 16 | 192 | 12 | 173 | 6.41e-45 | 156 |
MS.gene040551.t1 | MTR_3g064580 | 49.091 | 165 | 69 | 4 | 24 | 187 | 8 | 158 | 6.68e-45 | 162 |
MS.gene040551.t1 | MTR_7g085260 | 46.328 | 177 | 84 | 4 | 16 | 192 | 12 | 177 | 7.52e-45 | 157 |
MS.gene040551.t1 | MTR_6g012670 | 36.803 | 269 | 145 | 10 | 16 | 278 | 15 | 264 | 1.51e-44 | 154 |
MS.gene040551.t1 | MTR_2g062730 | 37.450 | 251 | 122 | 9 | 18 | 263 | 7 | 227 | 1.80e-44 | 155 |
MS.gene040551.t1 | MTR_6g032770 | 45.304 | 181 | 84 | 4 | 10 | 187 | 3 | 171 | 3.49e-44 | 155 |
MS.gene040551.t1 | MTR_8g076110 | 44.828 | 174 | 76 | 4 | 18 | 189 | 3 | 158 | 3.53e-44 | 153 |
MS.gene040551.t1 | MTR_5g076850 | 47.590 | 166 | 71 | 4 | 24 | 188 | 8 | 158 | 3.69e-44 | 159 |
MS.gene040551.t1 | MTR_7g005280 | 46.471 | 170 | 72 | 4 | 24 | 193 | 17 | 167 | 4.59e-44 | 151 |
MS.gene040551.t1 | MTR_3g070030 | 34.343 | 297 | 164 | 9 | 3 | 284 | 1 | 281 | 3.36e-43 | 152 |
MS.gene040551.t1 | MTR_1g096430 | 43.678 | 174 | 78 | 4 | 15 | 186 | 1 | 156 | 2.33e-42 | 149 |
MS.gene040551.t1 | MTR_3g096920 | 54.286 | 140 | 56 | 5 | 18 | 157 | 4 | 135 | 2.49e-42 | 149 |
MS.gene040551.t1 | MTR_2g064470 | 36.531 | 271 | 142 | 9 | 24 | 293 | 13 | 254 | 4.24e-42 | 147 |
MS.gene040551.t1 | MTR_6g084430 | 42.045 | 176 | 81 | 5 | 18 | 192 | 2 | 157 | 1.11e-41 | 147 |
MS.gene040551.t1 | MTR_8g099750 | 45.783 | 166 | 79 | 4 | 24 | 189 | 16 | 170 | 1.84e-41 | 144 |
MS.gene040551.t1 | MTR_7g011130 | 42.786 | 201 | 96 | 6 | 1 | 193 | 1 | 190 | 1.88e-41 | 147 |
MS.gene040551.t1 | MTR_5g014300 | 42.857 | 168 | 78 | 3 | 24 | 187 | 8 | 161 | 5.36e-41 | 145 |
MS.gene040551.t1 | MTR_4g098630 | 38.571 | 210 | 106 | 6 | 24 | 232 | 8 | 195 | 5.37e-41 | 145 |
MS.gene040551.t1 | MTR_4g075980 | 41.361 | 191 | 87 | 4 | 1 | 191 | 1 | 166 | 8.59e-41 | 144 |
MS.gene040551.t1 | MTR_1g090723 | 44.186 | 172 | 79 | 4 | 24 | 193 | 10 | 166 | 1.72e-40 | 149 |
MS.gene040551.t1 | MTR_1g090723 | 44.767 | 172 | 77 | 4 | 24 | 193 | 10 | 165 | 2.37e-40 | 149 |
MS.gene040551.t1 | MTR_7g011120 | 35.125 | 279 | 161 | 7 | 9 | 284 | 1 | 262 | 2.39e-40 | 143 |
MS.gene040551.t1 | MTR_1g090723 | 44.767 | 172 | 77 | 4 | 24 | 193 | 10 | 165 | 2.41e-40 | 148 |
MS.gene040551.t1 | MTR_3g109340 | 44.886 | 176 | 79 | 6 | 18 | 192 | 19 | 177 | 9.38e-40 | 143 |
MS.gene040551.t1 | MTR_4g035590 | 37.619 | 210 | 100 | 7 | 21 | 228 | 8 | 188 | 1.05e-39 | 142 |
MS.gene040551.t1 | MTR_3g109340 | 43.750 | 176 | 80 | 5 | 18 | 192 | 19 | 176 | 1.57e-39 | 142 |
MS.gene040551.t1 | MTR_2g078700 | 44.848 | 165 | 77 | 5 | 24 | 187 | 25 | 176 | 3.26e-39 | 142 |
MS.gene040551.t1 | MTR_3g098810 | 37.850 | 214 | 107 | 4 | 13 | 226 | 6 | 193 | 7.53e-39 | 137 |
MS.gene040551.t1 | MTR_1g008740 | 41.622 | 185 | 91 | 6 | 9 | 192 | 1 | 169 | 1.07e-38 | 140 |
MS.gene040551.t1 | MTR_0036s0150 | 45.349 | 172 | 76 | 5 | 24 | 193 | 7 | 162 | 1.22e-38 | 143 |
MS.gene040551.t1 | MTR_1g008740 | 41.270 | 189 | 94 | 6 | 5 | 192 | 11 | 183 | 1.30e-38 | 140 |
MS.gene040551.t1 | MTR_3g096140 | 39.665 | 179 | 92 | 3 | 18 | 195 | 3 | 166 | 2.57e-38 | 137 |
MS.gene040551.t1 | MTR_1g069805 | 36.866 | 217 | 108 | 7 | 24 | 238 | 12 | 201 | 3.68e-38 | 136 |
MS.gene040551.t1 | MTR_8g063550 | 40.805 | 174 | 87 | 3 | 23 | 195 | 7 | 165 | 1.12e-37 | 137 |
MS.gene040551.t1 | MTR_1g097300 | 41.279 | 172 | 85 | 4 | 23 | 193 | 20 | 176 | 1.19e-37 | 141 |
MS.gene040551.t1 | MTR_3g096140 | 39.665 | 179 | 92 | 3 | 18 | 195 | 3 | 166 | 1.58e-37 | 137 |
MS.gene040551.t1 | MTR_8g063550 | 40.805 | 174 | 87 | 3 | 23 | 195 | 7 | 165 | 2.88e-37 | 138 |
MS.gene040551.t1 | MTR_5g069030 | 42.614 | 176 | 84 | 5 | 12 | 186 | 16 | 175 | 4.34e-37 | 140 |
MS.gene040551.t1 | MTR_8g063550 | 40.805 | 174 | 87 | 3 | 23 | 195 | 7 | 165 | 5.52e-37 | 137 |
MS.gene040551.t1 | MTR_1g090720 | 43.636 | 165 | 83 | 3 | 24 | 187 | 44 | 199 | 7.50e-37 | 137 |
MS.gene040551.t1 | MTR_2g086880 | 40.351 | 171 | 85 | 4 | 12 | 169 | 2 | 168 | 8.46e-37 | 139 |
MS.gene040551.t1 | MTR_2g086880 | 40.116 | 172 | 86 | 4 | 12 | 170 | 2 | 169 | 1.27e-36 | 137 |
MS.gene040551.t1 | MTR_3g093050 | 40.884 | 181 | 90 | 5 | 8 | 187 | 9 | 173 | 1.46e-36 | 138 |
MS.gene040551.t1 | MTR_8g093580 | 39.655 | 174 | 89 | 3 | 23 | 195 | 7 | 165 | 2.36e-36 | 136 |
MS.gene040551.t1 | MTR_3g093050 | 40.884 | 181 | 90 | 5 | 8 | 187 | 9 | 173 | 2.38e-36 | 137 |
MS.gene040551.t1 | MTR_3g116070 | 42.593 | 162 | 88 | 4 | 1 | 161 | 3 | 160 | 3.47e-36 | 133 |
MS.gene040551.t1 | MTR_3g070040 | 32.482 | 274 | 153 | 8 | 26 | 284 | 12 | 268 | 1.50e-34 | 128 |
MS.gene040551.t1 | MTR_7g097090 | 40.994 | 161 | 77 | 3 | 24 | 184 | 12 | 154 | 1.83e-34 | 127 |
MS.gene040551.t1 | MTR_3g098810 | 45.070 | 142 | 74 | 3 | 13 | 154 | 6 | 143 | 7.39e-34 | 122 |
MS.gene040551.t1 | MTR_3g093040 | 40.476 | 168 | 83 | 4 | 21 | 187 | 108 | 259 | 9.51e-34 | 125 |
MS.gene040551.t1 | MTR_8g023840 | 46.617 | 133 | 65 | 5 | 20 | 150 | 10 | 138 | 3.72e-32 | 123 |
MS.gene040551.t1 | MTR_4g052620 | 41.053 | 190 | 93 | 8 | 20 | 204 | 3 | 178 | 3.92e-31 | 117 |
MS.gene040551.t1 | MTR_8g023860 | 39.157 | 166 | 79 | 6 | 21 | 184 | 12 | 157 | 4.96e-29 | 115 |
MS.gene040551.t1 | MTR_2g086690 | 32.727 | 220 | 128 | 7 | 24 | 236 | 6 | 212 | 3.31e-28 | 109 |
MS.gene040551.t1 | MTR_3g096140 | 36.478 | 159 | 85 | 3 | 38 | 195 | 2 | 145 | 2.13e-27 | 109 |
MS.gene040551.t1 | MTR_7g105170 | 34.737 | 190 | 107 | 8 | 24 | 208 | 6 | 183 | 7.89e-27 | 106 |
MS.gene040551.t1 | MTR_8g023900 | 37.805 | 164 | 81 | 5 | 25 | 186 | 196 | 340 | 1.08e-26 | 109 |
MS.gene040551.t1 | MTR_8g023900 | 37.725 | 167 | 84 | 6 | 23 | 186 | 12 | 161 | 1.81e-26 | 108 |
MS.gene040551.t1 | MTR_8g023930 | 36.232 | 207 | 102 | 9 | 23 | 226 | 24 | 203 | 9.34e-26 | 107 |
MS.gene040551.t1 | MTR_4g094302 | 31.707 | 164 | 96 | 4 | 24 | 187 | 13 | 160 | 7.35e-25 | 99.4 |
MS.gene040551.t1 | MTR_8g094580 | 48.214 | 112 | 46 | 5 | 75 | 186 | 5 | 104 | 7.46e-25 | 100 |
MS.gene040551.t1 | MTR_4g094302 | 37.879 | 132 | 65 | 4 | 24 | 152 | 13 | 130 | 1.98e-23 | 94.7 |
MS.gene040551.t1 | MTR_7g070140 | 46.316 | 95 | 40 | 2 | 76 | 161 | 17 | 109 | 2.35e-19 | 83.2 |
MS.gene040551.t1 | MTR_8g023880 | 33.846 | 195 | 89 | 10 | 18 | 195 | 2 | 173 | 5.43e-19 | 85.1 |
MS.gene040551.t1 | MTR_7g083330 | 34.839 | 155 | 82 | 7 | 1 | 150 | 1 | 141 | 9.26e-19 | 82.8 |
MS.gene040551.t1 | MTR_7g083370 | 33.333 | 144 | 86 | 6 | 14 | 155 | 3 | 138 | 3.23e-18 | 80.1 |
MS.gene040551.t1 | MTR_8g093790 | 30.675 | 163 | 77 | 7 | 24 | 186 | 12 | 138 | 2.25e-17 | 79.0 |
MS.gene040551.t1 | MTR_7g083360 | 34.783 | 138 | 82 | 5 | 14 | 150 | 3 | 133 | 6.53e-17 | 77.0 |
MS.gene040551.t1 | MTR_1g087190 | 67.391 | 46 | 14 | 1 | 24 | 68 | 7 | 52 | 1.90e-16 | 72.4 |
MS.gene040551.t1 | MTR_3g096400 | 29.545 | 176 | 100 | 7 | 24 | 194 | 9 | 165 | 1.73e-15 | 74.3 |
MS.gene040551.t1 | MTR_7g070150 | 41.892 | 74 | 27 | 2 | 122 | 193 | 7 | 66 | 7.93e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040551.t1 | AT2G43000 | 52.083 | 288 | 109 | 10 | 16 | 303 | 12 | 270 | 4.36e-86 | 259 |
MS.gene040551.t1 | AT3G12910 | 47.855 | 303 | 136 | 9 | 10 | 305 | 9 | 296 | 3.21e-84 | 256 |
MS.gene040551.t1 | AT1G26870 | 45.517 | 290 | 121 | 8 | 20 | 306 | 14 | 269 | 8.80e-70 | 223 |
MS.gene040551.t1 | AT5G39820 | 57.292 | 192 | 59 | 5 | 14 | 186 | 4 | 191 | 5.76e-69 | 218 |
MS.gene040551.t1 | AT3G04070 | 48.108 | 185 | 81 | 5 | 16 | 187 | 5 | 187 | 1.37e-54 | 182 |
MS.gene040551.t1 | AT3G04070 | 50.289 | 173 | 79 | 5 | 16 | 187 | 5 | 171 | 1.40e-54 | 181 |
MS.gene040551.t1 | AT1G61110 | 46.939 | 196 | 88 | 5 | 8 | 197 | 3 | 188 | 3.80e-52 | 174 |
MS.gene040551.t1 | AT2G02450 | 51.829 | 164 | 62 | 4 | 23 | 186 | 52 | 198 | 3.02e-51 | 173 |
MS.gene040551.t1 | AT2G02450 | 51.829 | 164 | 62 | 4 | 23 | 186 | 52 | 198 | 3.24e-51 | 174 |
MS.gene040551.t1 | AT1G69490 | 50.581 | 172 | 72 | 5 | 15 | 186 | 3 | 161 | 4.04e-51 | 170 |
MS.gene040551.t1 | AT5G08790 | 46.078 | 204 | 89 | 8 | 25 | 227 | 10 | 193 | 1.28e-49 | 166 |
MS.gene040551.t1 | AT1G01720 | 39.922 | 258 | 132 | 8 | 24 | 279 | 9 | 245 | 3.23e-49 | 166 |
MS.gene040551.t1 | AT1G12260 | 37.786 | 262 | 131 | 6 | 21 | 270 | 7 | 248 | 1.51e-48 | 166 |
MS.gene040551.t1 | AT3G15510 | 47.647 | 170 | 78 | 4 | 26 | 191 | 21 | 183 | 2.77e-48 | 165 |
MS.gene040551.t1 | AT5G07680 | 36.559 | 279 | 151 | 8 | 16 | 289 | 12 | 269 | 2.94e-48 | 164 |
MS.gene040551.t1 | AT1G12260 | 46.067 | 178 | 76 | 4 | 21 | 196 | 7 | 166 | 4.68e-48 | 166 |
MS.gene040551.t1 | AT1G52890 | 49.714 | 175 | 68 | 4 | 24 | 196 | 16 | 172 | 6.44e-48 | 163 |
MS.gene040551.t1 | AT4G27410 | 48.864 | 176 | 73 | 5 | 24 | 198 | 16 | 175 | 7.38e-48 | 162 |
MS.gene040551.t1 | AT3G15500 | 50.292 | 171 | 65 | 4 | 24 | 192 | 16 | 168 | 9.76e-48 | 162 |
MS.gene040551.t1 | AT5G07680 | 36.727 | 275 | 148 | 8 | 20 | 289 | 2 | 255 | 2.47e-47 | 161 |
MS.gene040551.t1 | AT5G63790 | 45.833 | 192 | 86 | 7 | 25 | 216 | 63 | 236 | 4.37e-47 | 161 |
MS.gene040551.t1 | AT5G63790 | 45.833 | 192 | 86 | 7 | 25 | 216 | 53 | 226 | 4.48e-47 | 160 |
MS.gene040551.t1 | AT5G61430 | 45.763 | 177 | 81 | 4 | 16 | 192 | 11 | 172 | 8.94e-47 | 160 |
MS.gene040551.t1 | AT2G43000 | 64.122 | 131 | 30 | 4 | 85 | 212 | 2 | 118 | 1.02e-46 | 156 |
MS.gene040551.t1 | AT5G13180 | 45.405 | 185 | 83 | 3 | 9 | 193 | 1 | 167 | 2.39e-46 | 157 |
MS.gene040551.t1 | AT1G71930 | 38.583 | 254 | 115 | 8 | 24 | 263 | 11 | 237 | 3.21e-46 | 159 |
MS.gene040551.t1 | AT1G71930 | 38.583 | 254 | 115 | 8 | 24 | 263 | 11 | 237 | 3.21e-46 | 159 |
MS.gene040551.t1 | AT4G36160 | 45.977 | 174 | 74 | 4 | 15 | 186 | 4 | 159 | 3.57e-46 | 160 |
MS.gene040551.t1 | AT4G36160 | 45.977 | 174 | 74 | 4 | 15 | 186 | 4 | 159 | 3.57e-46 | 160 |
MS.gene040551.t1 | AT4G36160 | 45.977 | 174 | 74 | 4 | 15 | 186 | 8 | 163 | 3.70e-46 | 160 |
MS.gene040551.t1 | AT3G61910 | 35.798 | 257 | 148 | 7 | 15 | 261 | 5 | 254 | 4.32e-46 | 159 |
MS.gene040551.t1 | AT3G17730 | 42.132 | 197 | 91 | 4 | 24 | 219 | 8 | 182 | 6.03e-46 | 156 |
MS.gene040551.t1 | AT5G62380 | 45.833 | 168 | 72 | 4 | 24 | 189 | 9 | 159 | 6.16e-46 | 159 |
MS.gene040551.t1 | AT5G62380 | 45.833 | 168 | 72 | 4 | 24 | 189 | 9 | 159 | 6.16e-46 | 159 |
MS.gene040551.t1 | AT1G77450 | 47.429 | 175 | 78 | 5 | 24 | 198 | 12 | 172 | 1.08e-45 | 155 |
MS.gene040551.t1 | AT1G65910 | 47.368 | 171 | 72 | 4 | 24 | 192 | 8 | 162 | 1.48e-45 | 163 |
MS.gene040551.t1 | AT2G46770 | 43.750 | 176 | 90 | 4 | 15 | 186 | 10 | 180 | 2.05e-45 | 158 |
MS.gene040551.t1 | AT5G39610 | 38.247 | 251 | 134 | 7 | 14 | 261 | 11 | 243 | 3.31e-45 | 155 |
MS.gene040551.t1 | AT3G03200 | 41.315 | 213 | 103 | 6 | 24 | 234 | 8 | 200 | 4.05e-45 | 160 |
MS.gene040551.t1 | AT2G18060 | 46.023 | 176 | 74 | 5 | 21 | 193 | 9 | 166 | 4.21e-45 | 157 |
MS.gene040551.t1 | AT2G18060 | 46.023 | 176 | 74 | 5 | 21 | 193 | 9 | 166 | 4.21e-45 | 157 |
MS.gene040551.t1 | AT3G12977 | 39.419 | 241 | 108 | 10 | 18 | 255 | 15 | 220 | 4.83e-45 | 154 |
MS.gene040551.t1 | AT4G27410 | 44.000 | 200 | 80 | 6 | 24 | 206 | 16 | 200 | 7.14e-45 | 155 |
MS.gene040551.t1 | AT1G62700 | 45.087 | 173 | 75 | 4 | 19 | 189 | 5 | 159 | 9.14e-45 | 157 |
MS.gene040551.t1 | AT1G62700 | 45.087 | 173 | 75 | 4 | 19 | 189 | 5 | 159 | 9.14e-45 | 157 |
MS.gene040551.t1 | AT2G33480 | 47.590 | 166 | 68 | 4 | 24 | 189 | 17 | 163 | 7.78e-44 | 151 |
MS.gene040551.t1 | AT1G52880 | 51.220 | 164 | 76 | 3 | 26 | 189 | 21 | 180 | 8.52e-44 | 152 |
MS.gene040551.t1 | AT1G54330 | 46.386 | 166 | 70 | 3 | 24 | 188 | 8 | 155 | 9.00e-44 | 152 |
MS.gene040551.t1 | AT5G18270 | 47.337 | 169 | 73 | 5 | 20 | 187 | 20 | 173 | 9.64e-44 | 153 |
MS.gene040551.t1 | AT2G17040 | 44.186 | 172 | 78 | 3 | 20 | 191 | 4 | 157 | 1.15e-43 | 151 |
MS.gene040551.t1 | AT2G33480 | 47.590 | 166 | 66 | 4 | 24 | 189 | 17 | 161 | 1.52e-43 | 150 |
MS.gene040551.t1 | AT5G17260 | 44.118 | 170 | 80 | 4 | 24 | 192 | 8 | 163 | 2.00e-43 | 155 |
MS.gene040551.t1 | AT1G32510 | 42.222 | 180 | 90 | 4 | 24 | 199 | 8 | 177 | 2.35e-43 | 150 |
MS.gene040551.t1 | AT5G18270 | 46.746 | 169 | 74 | 5 | 20 | 187 | 20 | 173 | 3.50e-43 | 151 |
MS.gene040551.t1 | AT3G04060 | 49.412 | 170 | 70 | 7 | 20 | 188 | 19 | 173 | 5.37e-43 | 151 |
MS.gene040551.t1 | AT5G66300 | 41.361 | 191 | 91 | 5 | 24 | 209 | 14 | 188 | 9.30e-43 | 149 |
MS.gene040551.t1 | AT3G18400 | 44.571 | 175 | 79 | 5 | 18 | 192 | 2 | 158 | 9.90e-43 | 149 |
MS.gene040551.t1 | AT1G76420 | 42.857 | 182 | 85 | 6 | 17 | 197 | 18 | 181 | 1.22e-42 | 150 |
MS.gene040551.t1 | AT3G10500 | 45.614 | 171 | 77 | 4 | 24 | 193 | 11 | 166 | 3.14e-42 | 153 |
MS.gene040551.t1 | AT2G24430 | 37.652 | 247 | 131 | 8 | 17 | 262 | 12 | 236 | 4.67e-42 | 148 |
MS.gene040551.t1 | AT2G24430 | 37.652 | 247 | 131 | 8 | 17 | 262 | 12 | 236 | 4.67e-42 | 148 |
MS.gene040551.t1 | AT4G17980 | 44.848 | 165 | 79 | 4 | 24 | 187 | 8 | 161 | 9.61e-42 | 145 |
MS.gene040551.t1 | AT3G29035 | 49.045 | 157 | 72 | 4 | 15 | 169 | 16 | 166 | 1.20e-41 | 147 |
MS.gene040551.t1 | AT5G46590 | 50.000 | 130 | 61 | 2 | 24 | 152 | 8 | 134 | 1.74e-41 | 145 |
MS.gene040551.t1 | AT4G17980 | 44.848 | 165 | 79 | 4 | 24 | 187 | 8 | 161 | 2.10e-41 | 145 |
MS.gene040551.t1 | AT5G46590 | 50.000 | 130 | 61 | 2 | 24 | 152 | 8 | 134 | 2.95e-41 | 145 |
MS.gene040551.t1 | AT1G79580 | 42.424 | 165 | 76 | 4 | 24 | 186 | 19 | 166 | 6.83e-41 | 146 |
MS.gene040551.t1 | AT1G79580 | 42.424 | 165 | 76 | 4 | 24 | 186 | 19 | 166 | 6.83e-41 | 146 |
MS.gene040551.t1 | AT1G79580 | 42.424 | 165 | 76 | 4 | 24 | 186 | 19 | 166 | 6.83e-41 | 146 |
MS.gene040551.t1 | AT1G79580 | 42.424 | 165 | 76 | 4 | 24 | 186 | 19 | 166 | 6.83e-41 | 146 |
MS.gene040551.t1 | AT1G79580 | 42.424 | 165 | 76 | 4 | 24 | 186 | 19 | 166 | 6.83e-41 | 146 |
MS.gene040551.t1 | AT1G56010 | 37.705 | 244 | 107 | 9 | 24 | 252 | 21 | 234 | 1.40e-40 | 144 |
MS.gene040551.t1 | AT5G04410 | 44.444 | 171 | 79 | 3 | 24 | 193 | 11 | 166 | 1.58e-40 | 149 |
MS.gene040551.t1 | AT1G32770 | 40.761 | 184 | 91 | 6 | 15 | 191 | 10 | 182 | 2.59e-40 | 144 |
MS.gene040551.t1 | AT3G15170 | 43.094 | 181 | 88 | 6 | 16 | 194 | 15 | 182 | 5.41e-40 | 142 |
MS.gene040551.t1 | AT3G10480 | 43.636 | 165 | 77 | 4 | 24 | 187 | 29 | 178 | 7.98e-40 | 145 |
MS.gene040551.t1 | AT3G10480 | 43.636 | 165 | 78 | 4 | 24 | 187 | 29 | 179 | 8.28e-40 | 145 |
MS.gene040551.t1 | AT4G10350 | 39.899 | 198 | 87 | 6 | 21 | 216 | 9 | 176 | 1.06e-39 | 142 |
MS.gene040551.t1 | AT2G27300 | 40.940 | 149 | 84 | 1 | 23 | 171 | 15 | 159 | 2.78e-38 | 138 |
MS.gene040551.t1 | AT1G34190 | 42.105 | 171 | 83 | 4 | 24 | 193 | 18 | 173 | 4.07e-38 | 142 |
MS.gene040551.t1 | AT1G33280 | 41.818 | 165 | 76 | 3 | 24 | 186 | 10 | 156 | 4.17e-38 | 137 |
MS.gene040551.t1 | AT3G10490 | 41.818 | 165 | 81 | 5 | 24 | 187 | 29 | 179 | 7.30e-38 | 135 |
MS.gene040551.t1 | AT1G34180 | 41.520 | 171 | 84 | 4 | 24 | 193 | 18 | 173 | 2.94e-37 | 138 |
MS.gene040551.t1 | AT3G10490 | 41.566 | 166 | 80 | 5 | 24 | 187 | 29 | 179 | 3.28e-37 | 138 |
MS.gene040551.t1 | AT5G09330 | 38.728 | 173 | 90 | 3 | 24 | 195 | 8 | 165 | 3.66e-37 | 138 |
MS.gene040551.t1 | AT5G09330 | 38.728 | 173 | 90 | 3 | 24 | 195 | 8 | 165 | 3.66e-37 | 138 |
MS.gene040551.t1 | AT5G09330 | 38.728 | 173 | 90 | 3 | 24 | 195 | 8 | 165 | 3.66e-37 | 138 |
MS.gene040551.t1 | AT5G09330 | 38.728 | 173 | 90 | 3 | 24 | 195 | 8 | 165 | 3.66e-37 | 138 |
MS.gene040551.t1 | AT5G09330 | 38.728 | 173 | 90 | 3 | 24 | 195 | 8 | 165 | 3.66e-37 | 138 |
MS.gene040551.t1 | AT1G34180 | 41.520 | 171 | 84 | 4 | 24 | 193 | 18 | 173 | 1.06e-36 | 138 |
MS.gene040551.t1 | AT3G44290 | 42.188 | 128 | 70 | 1 | 23 | 150 | 15 | 138 | 1.09e-36 | 131 |
MS.gene040551.t1 | AT4G35580 | 51.515 | 132 | 58 | 3 | 21 | 151 | 9 | 135 | 1.93e-36 | 137 |
MS.gene040551.t1 | AT4G35580 | 51.515 | 132 | 58 | 3 | 21 | 151 | 9 | 135 | 2.05e-36 | 137 |
MS.gene040551.t1 | AT4G35580 | 51.515 | 132 | 58 | 3 | 21 | 151 | 9 | 135 | 2.17e-36 | 137 |
MS.gene040551.t1 | AT5G53950 | 43.636 | 165 | 81 | 4 | 24 | 188 | 19 | 171 | 2.73e-36 | 134 |
MS.gene040551.t1 | AT5G22290 | 42.105 | 133 | 73 | 1 | 18 | 150 | 17 | 145 | 3.68e-36 | 133 |
MS.gene040551.t1 | AT3G44290 | 42.188 | 128 | 70 | 1 | 23 | 150 | 15 | 138 | 7.82e-36 | 132 |
MS.gene040551.t1 | AT1G33060 | 45.833 | 144 | 72 | 3 | 9 | 151 | 12 | 150 | 1.18e-35 | 136 |
MS.gene040551.t1 | AT1G33060 | 45.833 | 144 | 72 | 3 | 9 | 151 | 12 | 150 | 1.24e-35 | 136 |
MS.gene040551.t1 | AT5G64060 | 39.394 | 165 | 84 | 3 | 24 | 187 | 8 | 157 | 1.33e-35 | 132 |
MS.gene040551.t1 | AT1G34180 | 38.798 | 183 | 84 | 4 | 24 | 193 | 18 | 185 | 2.17e-35 | 133 |
MS.gene040551.t1 | AT1G34180 | 38.798 | 183 | 84 | 4 | 24 | 193 | 18 | 185 | 7.57e-35 | 133 |
MS.gene040551.t1 | AT3G10480 | 36.364 | 198 | 78 | 4 | 24 | 187 | 29 | 212 | 1.58e-34 | 132 |
MS.gene040551.t1 | AT5G24590 | 49.618 | 131 | 61 | 3 | 23 | 151 | 13 | 140 | 1.37e-33 | 128 |
MS.gene040551.t1 | AT3G49530 | 40.361 | 166 | 83 | 5 | 23 | 186 | 13 | 164 | 2.06e-33 | 127 |
MS.gene040551.t1 | AT3G49530 | 40.361 | 166 | 83 | 5 | 23 | 186 | 13 | 164 | 7.19e-33 | 126 |
MS.gene040551.t1 | AT4G28530 | 40.884 | 181 | 69 | 6 | 24 | 186 | 12 | 172 | 1.67e-31 | 120 |
MS.gene040551.t1 | AT5G04395 | 40.000 | 150 | 76 | 3 | 18 | 155 | 25 | 172 | 2.40e-31 | 116 |
MS.gene040551.t1 | AT3G12977 | 39.683 | 189 | 76 | 9 | 70 | 255 | 14 | 167 | 7.42e-30 | 113 |
MS.gene040551.t1 | AT5G61430 | 47.458 | 118 | 49 | 2 | 75 | 192 | 5 | 109 | 2.12e-29 | 113 |
MS.gene040551.t1 | AT5G64530 | 33.898 | 177 | 91 | 6 | 24 | 193 | 5 | 162 | 1.50e-28 | 108 |
MS.gene040551.t1 | AT5G22380 | 30.085 | 236 | 138 | 6 | 25 | 247 | 8 | 229 | 4.77e-28 | 108 |
MS.gene040551.t1 | AT1G32870 | 46.324 | 136 | 66 | 3 | 18 | 152 | 6 | 135 | 2.47e-27 | 111 |
MS.gene040551.t1 | AT1G32870 | 46.324 | 136 | 66 | 3 | 18 | 152 | 6 | 135 | 2.71e-27 | 111 |
MS.gene040551.t1 | AT1G32870 | 46.324 | 136 | 66 | 3 | 18 | 152 | 42 | 171 | 3.86e-27 | 111 |
MS.gene040551.t1 | AT5G64530 | 40.000 | 130 | 63 | 4 | 24 | 153 | 5 | 119 | 6.04e-26 | 101 |
MS.gene040551.t1 | AT3G44350 | 31.020 | 245 | 139 | 10 | 25 | 262 | 8 | 229 | 9.99e-25 | 100 |
MS.gene040551.t1 | AT1G56010 | 35.263 | 190 | 80 | 7 | 77 | 252 | 7 | 167 | 1.40e-24 | 100 |
MS.gene040551.t1 | AT4G01550 | 40.909 | 132 | 75 | 3 | 23 | 152 | 5 | 135 | 8.09e-24 | 101 |
MS.gene040551.t1 | AT3G44350 | 39.850 | 133 | 69 | 4 | 25 | 151 | 8 | 135 | 1.76e-23 | 94.7 |
MS.gene040551.t1 | AT4G01540 | 42.105 | 133 | 73 | 4 | 23 | 152 | 5 | 136 | 4.16e-23 | 98.6 |
MS.gene040551.t1 | AT4G01540 | 42.105 | 133 | 73 | 4 | 23 | 152 | 5 | 136 | 5.14e-23 | 98.6 |
MS.gene040551.t1 | AT2G33480 | 44.348 | 115 | 49 | 3 | 75 | 189 | 7 | 106 | 5.72e-23 | 94.7 |
MS.gene040551.t1 | AT4G01540 | 42.105 | 133 | 73 | 4 | 23 | 152 | 5 | 136 | 6.30e-23 | 99.0 |
MS.gene040551.t1 | AT4G01540 | 42.105 | 133 | 73 | 4 | 23 | 152 | 5 | 136 | 6.42e-23 | 98.6 |
MS.gene040551.t1 | AT4G01520 | 40.458 | 131 | 74 | 4 | 25 | 152 | 7 | 136 | 6.86e-23 | 96.7 |
MS.gene040551.t1 | AT4G10350 | 38.298 | 141 | 58 | 4 | 76 | 216 | 18 | 129 | 8.88e-21 | 90.9 |
MS.gene040551.t1 | AT1G02230 | 39.850 | 133 | 73 | 5 | 25 | 154 | 6 | 134 | 4.45e-20 | 89.7 |
MS.gene040551.t1 | AT1G02250 | 40.310 | 129 | 70 | 5 | 25 | 150 | 6 | 130 | 1.30e-19 | 88.6 |
MS.gene040551.t1 | AT3G04420 | 37.984 | 129 | 73 | 4 | 25 | 150 | 6 | 130 | 5.67e-19 | 85.5 |
MS.gene040551.t1 | AT3G04420 | 37.984 | 129 | 73 | 4 | 25 | 150 | 6 | 130 | 1.67e-18 | 85.1 |
MS.gene040551.t1 | AT5G14000 | 30.000 | 160 | 102 | 4 | 9 | 166 | 3 | 154 | 1.04e-17 | 79.3 |
MS.gene040551.t1 | AT4G28530 | 42.991 | 107 | 42 | 3 | 24 | 113 | 12 | 116 | 1.99e-17 | 81.6 |
MS.gene040551.t1 | AT5G14000 | 30.189 | 159 | 101 | 4 | 9 | 165 | 3 | 153 | 1.11e-16 | 77.4 |
MS.gene040551.t1 | AT5G50820 | 35.556 | 135 | 72 | 5 | 24 | 155 | 19 | 141 | 2.09e-16 | 76.6 |
MS.gene040551.t1 | AT2G18060 | 42.553 | 94 | 36 | 3 | 101 | 193 | 2 | 78 | 6.66e-16 | 76.6 |
MS.gene040551.t1 | AT1G02220 | 36.434 | 129 | 72 | 5 | 25 | 150 | 6 | 127 | 1.08e-14 | 74.3 |
MS.gene040551.t1 | AT1G01010 | 34.591 | 159 | 88 | 8 | 25 | 170 | 6 | 161 | 1.98e-14 | 73.9 |
MS.gene040551.t1 | AT3G56530 | 30.882 | 136 | 88 | 2 | 24 | 157 | 54 | 185 | 5.37e-13 | 68.9 |
MS.gene040551.t1 | AT3G10490 | 36.559 | 93 | 43 | 4 | 96 | 187 | 2 | 79 | 3.79e-12 | 66.6 |
MS.gene040551.t1 | AT3G10490 | 36.559 | 93 | 43 | 4 | 96 | 187 | 2 | 79 | 3.79e-12 | 66.6 |
Find 47 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTATTATCATTTGATAAT+TGG | 0.114896 | 2.3:-27052454 | MS.gene040551:CDS |
CCTCATTGTGATGATGTTCT+TGG | 0.175150 | 2.3:+27052618 | None:intergenic |
CAAGAAACATATATCAATTT+TGG | 0.178717 | 2.3:-27052647 | MS.gene040551:CDS |
TATACGACATGCAGGAAATT+TGG | 0.191903 | 2.3:-27052805 | MS.gene040551:intron |
GAGTCACTGGGTCTGGATTT+TGG | 0.213679 | 2.3:-27053656 | MS.gene040551:CDS |
AGCATAGGAAATGTTTGTTT+TGG | 0.292918 | 2.3:+27053473 | None:intergenic |
GTTATTATCATTTGATAATT+GGG | 0.315345 | 2.3:-27052453 | MS.gene040551:CDS |
CCAGACCCAGTGACTCTATT+TGG | 0.319659 | 2.3:+27053663 | None:intergenic |
GAAAATGATGTTCCACTTCC+TGG | 0.355284 | 2.3:-27054647 | MS.gene040551:CDS |
ATGCATCATCCAATCAGTTT+TGG | 0.361511 | 2.3:+27053524 | None:intergenic |
CCAAATAGAGTCACTGGGTC+TGG | 0.392963 | 2.3:-27053663 | MS.gene040551:CDS |
TTGATGAGATCAATAGCAAT+AGG | 0.399965 | 2.3:+27054557 | None:intergenic |
GTCAAAGAGGAAGAAAATAT+AGG | 0.422731 | 2.3:-27053698 | MS.gene040551:CDS |
TTCATGAATGGTTTGACGCT+TGG | 0.438624 | 2.3:+27052712 | None:intergenic |
CAATGTACCTGGAGCAGAAA+AGG | 0.440217 | 2.3:-27053736 | MS.gene040551:CDS |
ATATCTACAAATATGATCCT+TGG | 0.441210 | 2.3:-27054526 | MS.gene040551:CDS |
TAGTAGAATGAATAGCAGTA+TGG | 0.446759 | 2.3:-27052684 | MS.gene040551:CDS |
TTTGATAATTGGGATGAGCT+TGG | 0.467447 | 2.3:-27052443 | MS.gene040551:CDS |
GACAAAGCAATATACTCAAA+TGG | 0.469362 | 2.3:-27053618 | MS.gene040551:CDS |
GGTTTGACGCTTGGTAGCTA+AGG | 0.470329 | 2.3:+27052721 | None:intergenic |
TATCTACAAATATGATCCTT+GGG | 0.485955 | 2.3:-27054525 | MS.gene040551:CDS |
GTTAGACCAAATAGAGTCAC+TGG | 0.491150 | 2.3:-27053669 | MS.gene040551:CDS |
AGAATTACTATTTACAAACT+AGG | 0.491310 | 2.3:+27052392 | None:intergenic |
GAAAAGGTACCAAAACTGAT+TGG | 0.495807 | 2.3:-27053533 | MS.gene040551:CDS |
CTGCTTGTATAATTGTTGAC+TGG | 0.500791 | 2.3:+27052590 | None:intergenic |
TATGCAGAAGCCAATGTACC+TGG | 0.508560 | 2.3:-27053747 | MS.gene040551:intron |
TACCGTGGTAGTGCCGGAAA+AGG | 0.516742 | 2.3:-27053549 | MS.gene040551:CDS |
GTTTACTACCGTGGTAGTGC+CGG | 0.518269 | 2.3:-27053555 | MS.gene040551:CDS |
TGGAAACGAAATCCAGGAAG+TGG | 0.529636 | 2.3:+27054635 | None:intergenic |
ATATACTCAAATGGAGGAGA+AGG | 0.533042 | 2.3:-27053609 | MS.gene040551:CDS |
CAAGTTCTTCATCTGTAGGA+TGG | 0.540071 | 2.3:+27054615 | None:intergenic |
GCAACAAGTTCTTCATCTGT+AGG | 0.546135 | 2.3:+27054611 | None:intergenic |
GTTTGACGCTTGGTAGCTAA+GGG | 0.553957 | 2.3:+27052722 | None:intergenic |
GTAGGATGGAAACGAAATCC+AGG | 0.566609 | 2.3:+27054629 | None:intergenic |
GACATACTTGGAAGATCCCA+AGG | 0.569277 | 2.3:+27054509 | None:intergenic |
GGAGAAGGAAATGATTGTGT+TGG | 0.583944 | 2.3:-27053594 | MS.gene040551:CDS |
ATCAGCATCATTCTTAGCAT+AGG | 0.603706 | 2.3:+27053458 | None:intergenic |
AAAACACTTGTTTACTACCG+TGG | 0.605694 | 2.3:-27053564 | MS.gene040551:CDS |
AGAGAAGATGGGTATGAACG+AGG | 0.606606 | 2.3:-27054705 | None:intergenic |
AGATCAATTGAGCTCTTCAG+TGG | 0.611925 | 2.3:-27052543 | MS.gene040551:CDS |
TGTGTTACATTAATTTGTTG+AGG | 0.634779 | 2.3:+27052512 | None:intergenic |
TCAAAAGAAATGTATCACAA+AGG | 0.638749 | 2.3:-27052766 | MS.gene040551:CDS |
AAAGCAATATACTCAAATGG+AGG | 0.648134 | 2.3:-27053615 | MS.gene040551:CDS |
GTACCTGGAGCAGAAAAGGA+AGG | 0.664754 | 2.3:-27053732 | MS.gene040551:CDS |
TTAGACCAAATAGAGTCACT+GGG | 0.677648 | 2.3:-27053668 | MS.gene040551:CDS |
TATGAACGAGGATTTCAACA+TGG | 0.688452 | 2.3:-27054693 | MS.gene040551:CDS |
CCAAGAACATCATCACAATG+AGG | 0.697223 | 2.3:-27052618 | MS.gene040551:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAATATATATATATT+TGG | - | chr2.3:27053191-27053210 | MS.gene040551:intron | 0.0% |
!! | ATATATATATATATATATAT+AGG | - | chr2.3:27053032-27053051 | MS.gene040551:intron | 0.0% |
!! | AATAAATCAAAAAGAAAAAA+AGG | + | chr2.3:27052631-27052650 | None:intergenic | 10.0% |
!! | CTATTGTAAAAATAAGAATA+GGG | - | chr2.3:27052729-27052748 | MS.gene040551:CDS | 15.0% |
!! | TCTATTGTAAAAATAAGAAT+AGG | - | chr2.3:27052728-27052747 | MS.gene040551:CDS | 15.0% |
!!! | AGTTATTATCATTTGATAAT+TGG | - | chr2.3:27054647-27054666 | MS.gene040551:CDS | 15.0% |
!!! | GTTATTATCATTTGATAATT+GGG | - | chr2.3:27054648-27054667 | MS.gene040551:CDS | 15.0% |
!!! | TTCTGAAATATAGAATATAA+GGG | + | chr2.3:27052872-27052891 | None:intergenic | 15.0% |
!! | AAATTAATAAGGCCAAAATT+TGG | + | chr2.3:27053707-27053726 | None:intergenic | 20.0% |
!! | AAGTTACTAACTAAATTTGA+TGG | + | chr2.3:27053953-27053972 | None:intergenic | 20.0% |
!! | ATATAGTTACCAATAATGAA+GGG | + | chr2.3:27053309-27053328 | None:intergenic | 20.0% |
!! | ATATATCTTAGCTATATTCA+AGG | - | chr2.3:27052833-27052852 | MS.gene040551:intron | 20.0% |
!! | TATATAGTTACCAATAATGA+AGG | + | chr2.3:27053310-27053329 | None:intergenic | 20.0% |
!!! | CAAGAAACATATATCAATTT+TGG | - | chr2.3:27054454-27054473 | MS.gene040551:intron | 20.0% |
!!! | CTTCTGAAATATAGAATATA+AGG | + | chr2.3:27052873-27052892 | None:intergenic | 20.0% |
!!! | TAACACAATCTTCAAATTTT+TGG | - | chr2.3:27054605-27054624 | MS.gene040551:CDS | 20.0% |
! | AAGGAAGAGAGAAATTAATA+AGG | + | chr2.3:27053718-27053737 | None:intergenic | 25.0% |
! | AATAATGAAGGGAAAAGTAA+AGG | + | chr2.3:27053298-27053317 | None:intergenic | 25.0% |
! | AGAAATAGATGGTTTGATTA+TGG | - | chr2.3:27052805-27052824 | MS.gene040551:intron | 25.0% |
! | ATAAATTAGAGAGACATACT+TGG | + | chr2.3:27052607-27052626 | None:intergenic | 25.0% |
! | ATAATGAAGGGAAAAGTAAA+GGG | + | chr2.3:27053297-27053316 | None:intergenic | 25.0% |
! | ATATCTACAAATATGATCCT+TGG | - | chr2.3:27052575-27052594 | MS.gene040551:CDS | 25.0% |
! | TATCTACAAATATGATCCTT+GGG | - | chr2.3:27052576-27052595 | MS.gene040551:CDS | 25.0% |
! | TCAAAAGAAATGTATCACAA+AGG | - | chr2.3:27054335-27054354 | MS.gene040551:intron | 25.0% |
!! | ACATAATACCTACCAAATTT+TGG | - | chr2.3:27053692-27053711 | MS.gene040551:CDS | 25.0% |
!! | ACCTATAAAACCTTTTGATA+AGG | + | chr2.3:27053864-27053883 | None:intergenic | 25.0% |
!! | TAAACCGCTCTTAAATTTTA+GGG | + | chr2.3:27053912-27053931 | None:intergenic | 25.0% |
!! | TGATTAATGAAGAGTACAAT+GGG | + | chr2.3:27054117-27054136 | None:intergenic | 25.0% |
!! | TTAAACCGCTCTTAAATTTT+AGG | + | chr2.3:27053913-27053932 | None:intergenic | 25.0% |
!! | TTAGAACAAGTTTGTTTAAG+AGG | + | chr2.3:27054267-27054286 | None:intergenic | 25.0% |
!! | TTGATTAATGAAGAGTACAA+TGG | + | chr2.3:27054118-27054137 | None:intergenic | 25.0% |
!!! | CTAATTTGTTCTCTTTGTAA+TGG | - | chr2.3:27054082-27054101 | MS.gene040551:intron | 25.0% |
!!! | TCCTTATCAAAAGGTTTTAT+AGG | - | chr2.3:27053860-27053879 | MS.gene040551:intron | 25.0% |
!!! | TGTGTTACATTAATTTGTTG+AGG | + | chr2.3:27054592-27054611 | None:intergenic | 25.0% |
!!! | TTTACTTTTCCCTTCATTAT+TGG | - | chr2.3:27053297-27053316 | MS.gene040551:intron | 25.0% |
AAAATAAGAATAGGGTTTCC+AGG | - | chr2.3:27052737-27052756 | MS.gene040551:CDS | 30.0% | |
AAAGCAATATACTCAAATGG+AGG | - | chr2.3:27053486-27053505 | MS.gene040551:CDS | 30.0% | |
AGAGAGTTATCCTTATCAAA+AGG | - | chr2.3:27053851-27053870 | MS.gene040551:intron | 30.0% | |
ATATGCCAAAAAAATGAGAC+TGG | + | chr2.3:27053742-27053761 | None:intergenic | 30.0% | |
ATTTGCACTATGTAGAAAAG+TGG | + | chr2.3:27053261-27053280 | None:intergenic | 30.0% | |
CATGCACAAATAGAAATAGA+TGG | - | chr2.3:27052794-27052813 | MS.gene040551:CDS | 30.0% | |
CTCTCATATAACACATTATC+CGG | + | chr2.3:27053835-27053854 | None:intergenic | 30.0% | |
GACAAAGCAATATACTCAAA+TGG | - | chr2.3:27053483-27053502 | MS.gene040551:CDS | 30.0% | |
GATACCCTAAAATTTAAGAG+CGG | - | chr2.3:27053905-27053924 | MS.gene040551:intron | 30.0% | |
GTCAAAGAGGAAGAAAATAT+AGG | - | chr2.3:27053403-27053422 | MS.gene040551:intron | 30.0% | |
GTTAGATTAGATATGATGAC+CGG | - | chr2.3:27053813-27053832 | MS.gene040551:intron | 30.0% | |
TAATAAGGCCAAAATTTGGT+AGG | + | chr2.3:27053703-27053722 | None:intergenic | 30.0% | |
TAGTAGAATGAATAGCAGTA+TGG | - | chr2.3:27054417-27054436 | MS.gene040551:intron | 30.0% | |
TGTATCACAAAGGAAAAACA+TGG | - | chr2.3:27054345-27054364 | MS.gene040551:intron | 30.0% | |
TTGATGAGATCAATAGCAAT+AGG | + | chr2.3:27052547-27052566 | None:intergenic | 30.0% | |
TTTGCACTATGTAGAAAAGT+GGG | + | chr2.3:27053260-27053279 | None:intergenic | 30.0% | |
! | AGCATAGGAAATGTTTGTTT+TGG | + | chr2.3:27053631-27053650 | None:intergenic | 30.0% |
! | TCTACTACTCTTTTCATGAA+TGG | + | chr2.3:27054404-27054423 | None:intergenic | 30.0% |
!! | AGAAAAGTGGGTTAGAATAT+AGG | + | chr2.3:27053248-27053267 | None:intergenic | 30.0% |
!! | TTGTTCTCTTTGTAATGGAT+TGG | - | chr2.3:27054087-27054106 | MS.gene040551:intron | 30.0% |
!!! | GGTTACTTTTTTTGTCAAAG+AGG | - | chr2.3:27053390-27053409 | MS.gene040551:intron | 30.0% |
AAAACACTTGTTTACTACCG+TGG | - | chr2.3:27053537-27053556 | MS.gene040551:CDS | 35.0% | |
ATATACTCAAATGGAGGAGA+AGG | - | chr2.3:27053492-27053511 | MS.gene040551:CDS | 35.0% | |
ATCAGCATCATTCTTAGCAT+AGG | + | chr2.3:27053646-27053665 | None:intergenic | 35.0% | |
CCAAAAAAATGAGACTGGAA+AGG | + | chr2.3:27053737-27053756 | None:intergenic | 35.0% | |
CTGCTTGTATAATTGTTGAC+TGG | + | chr2.3:27054514-27054533 | None:intergenic | 35.0% | |
TATACGACATGCAGGAAATT+TGG | - | chr2.3:27054296-27054315 | MS.gene040551:intron | 35.0% | |
TATGAACGAGGATTTCAACA+TGG | - | chr2.3:27052408-27052427 | MS.gene040551:CDS | 35.0% | |
TTAGACCAAATAGAGTCACT+GGG | - | chr2.3:27053433-27053452 | MS.gene040551:intron | 35.0% | |
! | ATGCATCATCCAATCAGTTT+TGG | + | chr2.3:27053580-27053599 | None:intergenic | 35.0% |
! | GATTTTTCTATACGACATGC+AGG | - | chr2.3:27054288-27054307 | MS.gene040551:intron | 35.0% |
! | TTTGATAATTGGGATGAGCT+TGG | - | chr2.3:27054658-27054677 | MS.gene040551:CDS | 35.0% |
! | TTTTCTTCATTCTTCCTTCC+TGG | + | chr2.3:27052758-27052777 | None:intergenic | 35.0% |
!! | ATCAGTTTTGGTACCTTTTC+CGG | + | chr2.3:27053568-27053587 | None:intergenic | 35.0% |
!! | GAAAAGGTACCAAAACTGAT+TGG | - | chr2.3:27053568-27053587 | MS.gene040551:CDS | 35.0% |
!! | GTTTTGGCATCAATGTTTGA+TGG | + | chr2.3:27053615-27053634 | None:intergenic | 35.0% |
!!! | CCTTTCCAGTCTCATTTTTT+TGG | - | chr2.3:27053734-27053753 | MS.gene040551:CDS | 35.0% |
ACTATTCCTCTTGTAGCTGA+TGG | + | chr2.3:27053001-27053020 | None:intergenic | 40.0% | |
AGATCAATTGAGCTCTTCAG+TGG | - | chr2.3:27054558-27054577 | MS.gene040551:CDS | 40.0% | |
CAAGTTCTTCATCTGTAGGA+TGG | + | chr2.3:27052489-27052508 | None:intergenic | 40.0% | |
CCAAGAACATCATCACAATG+AGG | - | chr2.3:27054483-27054502 | MS.gene040551:intron | 40.0% | |
GAAAATGATGTTCCACTTCC+TGG | - | chr2.3:27052454-27052473 | MS.gene040551:CDS | 40.0% | |
GCAACAAGTTCTTCATCTGT+AGG | + | chr2.3:27052493-27052512 | None:intergenic | 40.0% | |
GGAGAAGGAAATGATTGTGT+TGG | - | chr2.3:27053507-27053526 | MS.gene040551:CDS | 40.0% | |
GTTAGACCAAATAGAGTCAC+TGG | - | chr2.3:27053432-27053451 | MS.gene040551:intron | 40.0% | |
TAAGAATAGGGTTTCCAGGA+AGG | - | chr2.3:27052741-27052760 | MS.gene040551:CDS | 40.0% | |
TTCATGAATGGTTTGACGCT+TGG | + | chr2.3:27054392-27054411 | None:intergenic | 40.0% | |
! | CCTCATTGTGATGATGTTCT+TGG | + | chr2.3:27054486-27054505 | None:intergenic | 40.0% |
!! | TCTGGATTTTGGAAAGCAAC+TGG | - | chr2.3:27053456-27053475 | MS.gene040551:CDS | 40.0% |
CAATGTACCTGGAGCAGAAA+AGG | - | chr2.3:27053365-27053384 | MS.gene040551:intron | 45.0% | |
GACATACTTGGAAGATCCCA+AGG | + | chr2.3:27052595-27052614 | None:intergenic | 45.0% | |
GTAGGATGGAAACGAAATCC+AGG | + | chr2.3:27052475-27052494 | None:intergenic | 45.0% | |
TATGCAGAAGCCAATGTACC+TGG | - | chr2.3:27053354-27053373 | MS.gene040551:intron | 45.0% | |
TGGAAACGAAATCCAGGAAG+TGG | + | chr2.3:27052469-27052488 | None:intergenic | 45.0% | |
! | CTTTTCTGCTCCAGGTACAT+TGG | + | chr2.3:27053367-27053386 | None:intergenic | 45.0% |
! | GTTTGACGCTTGGTAGCTAA+GGG | + | chr2.3:27054382-27054401 | None:intergenic | 45.0% |
! | TAACCTTCCTTTTCTGCTCC+AGG | + | chr2.3:27053375-27053394 | None:intergenic | 45.0% |
CCAAATAGAGTCACTGGGTC+TGG | - | chr2.3:27053438-27053457 | MS.gene040551:intron | 50.0% | |
CCAGACCCAGTGACTCTATT+TGG | + | chr2.3:27053441-27053460 | None:intergenic | 50.0% | |
GAGCATCCATCAGCTACAAG+AGG | - | chr2.3:27052992-27053011 | MS.gene040551:intron | 50.0% | |
GTACCTGGAGCAGAAAAGGA+AGG | - | chr2.3:27053369-27053388 | MS.gene040551:intron | 50.0% | |
! | GAGTCACTGGGTCTGGATTT+TGG | - | chr2.3:27053445-27053464 | MS.gene040551:CDS | 50.0% |
! | GGTTTGACGCTTGGTAGCTA+AGG | + | chr2.3:27054383-27054402 | None:intergenic | 50.0% |
! | GTTTACTACCGTGGTAGTGC+CGG | - | chr2.3:27053546-27053565 | MS.gene040551:CDS | 50.0% |
! | TACCTTTTCCGGCACTACCA+CGG | + | chr2.3:27053557-27053576 | None:intergenic | 50.0% |
! | TACCGTGGTAGTGCCGGAAA+AGG | - | chr2.3:27053552-27053571 | MS.gene040551:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 27052403 | 27054720 | 27052403 | ID=MS.gene040551 |
chr2.3 | mRNA | 27052403 | 27054720 | 27052403 | ID=MS.gene040551.t1;Parent=MS.gene040551 |
chr2.3 | exon | 27054516 | 27054720 | 27054516 | ID=MS.gene040551.t1.exon1;Parent=MS.gene040551.t1 |
chr2.3 | CDS | 27054516 | 27054720 | 27054516 | ID=cds.MS.gene040551.t1;Parent=MS.gene040551.t1 |
chr2.3 | exon | 27053443 | 27053762 | 27053443 | ID=MS.gene040551.t1.exon2;Parent=MS.gene040551.t1 |
chr2.3 | CDS | 27053443 | 27053762 | 27053443 | ID=cds.MS.gene040551.t1;Parent=MS.gene040551.t1 |
chr2.3 | exon | 27052403 | 27052813 | 27052403 | ID=MS.gene040551.t1.exon3;Parent=MS.gene040551.t1 |
chr2.3 | CDS | 27052403 | 27052813 | 27052403 | ID=cds.MS.gene040551.t1;Parent=MS.gene040551.t1 |
Gene Sequence |
Protein sequence |