AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040552

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040552.t1 MTR_2g068920 87.584 298 30 1 1 298 1 291 0.0 550
MS.gene040552.t1 MTR_2g068880 79.167 312 51 2 1 298 1 312 0.0 509
MS.gene040552.t1 MTR_5g090970 51.171 299 129 8 9 294 6 300 1.27e-95 285
MS.gene040552.t1 MTR_5g090970 50.502 299 130 8 9 294 6 299 1.18e-93 280
MS.gene040552.t1 MTR_5g040420 50.746 268 107 11 18 279 11 259 1.42e-74 234
MS.gene040552.t1 MTR_8g467490 61.905 168 59 3 18 185 11 173 1.37e-71 226
MS.gene040552.t1 MTR_6g011860 47.529 263 106 9 18 261 13 262 9.51e-69 219
MS.gene040552.t1 MTR_4g134460 50.888 169 66 4 17 185 50 201 3.46e-50 172
MS.gene040552.t1 MTR_2g079990 51.744 172 67 4 23 194 18 173 8.70e-50 169
MS.gene040552.t1 MTR_8g059170 52.571 175 63 6 23 194 16 173 4.04e-49 166
MS.gene040552.t1 MTR_3g088110 53.529 170 65 6 23 192 9 164 4.10e-49 165
MS.gene040552.t1 MTR_7g085220 47.929 169 75 5 23 186 10 170 8.67e-49 166
MS.gene040552.t1 MTR_2g080010 45.143 175 85 4 23 193 17 184 1.41e-48 165
MS.gene040552.t1 MTR_2157s0010 40.865 208 108 6 23 221 10 211 5.21e-48 161
MS.gene040552.t1 MTR_4g089135 45.213 188 84 4 23 196 17 199 6.03e-48 163
MS.gene040552.t1 MTR_2g079990 47.090 189 78 5 23 194 18 201 1.60e-47 163
MS.gene040552.t1 MTR_8g094580 46.196 184 82 5 23 202 9 179 1.84e-47 160
MS.gene040552.t1 MTR_5g041940 48.466 163 72 3 23 185 5 155 2.59e-47 159
MS.gene040552.t1 MTR_4g036030 45.614 171 73 4 20 188 7 159 2.74e-47 162
MS.gene040552.t1 MTR_4g081870 49.091 165 68 4 23 185 11 161 4.43e-47 159
MS.gene040552.t1 MTR_5g012080 46.512 172 72 5 20 188 7 161 1.34e-46 160
MS.gene040552.t1 MTR_7g100990 44.643 168 83 3 23 190 13 170 5.22e-46 158
MS.gene040552.t1 MTR_2g093810 45.238 168 82 3 23 190 16 173 1.03e-45 157
MS.gene040552.t1 MTR_3g435150 40.758 211 105 5 17 223 12 206 1.13e-45 156
MS.gene040552.t1 MTR_4g101680 44.199 181 81 5 20 198 7 169 1.48e-45 158
MS.gene040552.t1 MTR_5g021710 39.806 206 104 4 20 223 8 195 3.12e-45 157
MS.gene040552.t1 MTR_7g085260 46.067 178 83 5 19 196 16 180 2.32e-44 155
MS.gene040552.t1 MTR_4g108760 42.708 192 91 5 19 206 16 192 2.53e-44 154
MS.gene040552.t1 MTR_2g064090 45.665 173 75 5 23 194 8 162 3.88e-44 154
MS.gene040552.t1 MTR_6g032770 43.158 190 95 4 17 205 13 190 5.85e-44 154
MS.gene040552.t1 MTR_3g096920 50.000 160 66 6 23 182 9 154 1.59e-43 150
MS.gene040552.t1 MTR_6g477900 44.848 165 75 3 23 186 8 157 1.67e-43 149
MS.gene040552.t1 MTR_2g062730 41.538 195 92 7 20 211 10 185 1.77e-43 152
MS.gene040552.t1 MTR_6g012670 46.471 170 75 5 23 191 22 176 2.23e-43 151
MS.gene040552.t1 MTR_8g024480 44.643 168 84 4 20 185 15 175 2.88e-43 153
MS.gene040552.t1 MTR_7g005280 46.286 175 73 6 13 185 6 161 3.85e-43 148
MS.gene040552.t1 MTR_3g064580 47.619 168 69 5 23 187 8 159 7.02e-43 156
MS.gene040552.t1 MTR_5g076850 46.386 166 73 4 23 187 8 158 1.37e-42 155
MS.gene040552.t1 MTR_8g076110 43.860 171 76 4 20 188 6 158 1.42e-42 149
MS.gene040552.t1 MTR_3g096920 55.814 129 51 3 23 151 9 131 4.89e-42 147
MS.gene040552.t1 MTR_8g099750 46.386 166 78 4 23 188 16 170 8.55e-42 144
MS.gene040552.t1 MTR_6g084430 41.143 175 84 4 17 191 2 157 8.97e-42 147
MS.gene040552.t1 MTR_3g109340 42.246 187 92 5 5 191 7 177 6.07e-41 145
MS.gene040552.t1 MTR_3g109340 41.176 187 93 4 5 191 7 176 1.12e-40 145
MS.gene040552.t1 MTR_4g075980 45.455 165 82 3 1 165 1 157 1.16e-40 143
MS.gene040552.t1 MTR_1g096430 43.030 165 75 3 23 185 9 156 1.80e-40 144
MS.gene040552.t1 MTR_2g078700 53.488 129 57 2 23 151 25 150 2.35e-40 144
MS.gene040552.t1 MTR_4g098630 38.571 210 106 6 23 231 8 195 4.81e-40 142
MS.gene040552.t1 MTR_7g011130 39.171 217 114 6 1 209 1 207 5.52e-40 143
MS.gene040552.t1 MTR_5g014300 42.262 168 79 3 23 186 8 161 6.34e-40 142
MS.gene040552.t1 MTR_2g064470 37.083 240 122 8 23 262 13 223 9.05e-40 141
MS.gene040552.t1 MTR_1g008740 39.362 188 98 4 5 191 11 183 1.53e-39 142
MS.gene040552.t1 MTR_3g070030 38.000 200 109 5 16 213 13 199 1.53e-39 142
MS.gene040552.t1 MTR_4g035590 37.879 198 94 5 20 215 8 178 1.75e-39 141
MS.gene040552.t1 MTR_1g008740 39.674 184 95 4 9 191 1 169 1.91e-39 141
MS.gene040552.t1 MTR_1g090723 44.444 171 78 5 23 191 10 165 9.80e-39 144
MS.gene040552.t1 MTR_1g090723 43.275 171 79 4 23 191 10 164 1.73e-38 143
MS.gene040552.t1 MTR_1g090723 43.275 171 79 4 23 191 10 164 2.00e-38 143
MS.gene040552.t1 MTR_1g069805 34.375 224 122 5 23 246 12 210 2.30e-38 137
MS.gene040552.t1 MTR_7g011120 38.350 206 114 5 9 213 1 194 4.99e-38 137
MS.gene040552.t1 MTR_2g086880 42.581 155 78 3 22 169 19 169 1.04e-37 140
MS.gene040552.t1 MTR_2g086880 42.581 155 78 3 22 169 19 169 1.37e-37 139
MS.gene040552.t1 MTR_1g097300 48.855 131 62 2 22 151 20 146 1.46e-37 140
MS.gene040552.t1 MTR_3g098810 37.441 211 111 5 23 233 16 205 1.66e-37 133
MS.gene040552.t1 MTR_3g096140 40.606 165 82 3 22 185 8 157 5.80e-37 133
MS.gene040552.t1 MTR_3g116070 49.242 132 63 3 23 153 25 153 9.22e-37 134
MS.gene040552.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 1.08e-36 134
MS.gene040552.t1 MTR_0036s0150 43.860 171 78 5 23 191 7 161 1.98e-36 137
MS.gene040552.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 2.51e-36 135
MS.gene040552.t1 MTR_1g090720 43.636 165 83 3 23 186 44 199 2.61e-36 135
MS.gene040552.t1 MTR_3g096140 40.606 165 82 3 22 185 8 157 2.83e-36 133
MS.gene040552.t1 MTR_8g063550 41.212 165 81 3 22 185 7 156 5.30e-36 134
MS.gene040552.t1 MTR_5g069030 42.515 167 79 5 20 185 25 175 5.80e-36 136
MS.gene040552.t1 MTR_3g093050 41.011 178 88 5 10 186 12 173 1.06e-35 135
MS.gene040552.t1 MTR_8g093580 40.000 165 83 3 22 185 7 156 2.00e-35 133
MS.gene040552.t1 MTR_3g093050 41.011 178 88 5 10 186 12 173 2.01e-35 134
MS.gene040552.t1 MTR_7g097090 40.373 161 78 3 23 183 12 154 8.43e-34 125
MS.gene040552.t1 MTR_3g093040 40.476 168 83 6 20 186 108 259 1.75e-33 125
MS.gene040552.t1 MTR_3g098810 47.328 131 66 2 23 153 16 143 2.38e-33 120
MS.gene040552.t1 MTR_8g023840 39.521 167 79 6 19 183 10 156 3.62e-32 123
MS.gene040552.t1 MTR_4g052620 37.273 220 112 8 18 223 2 209 9.45e-32 119
MS.gene040552.t1 MTR_3g070040 38.690 168 87 4 25 191 12 164 1.46e-31 120
MS.gene040552.t1 MTR_8g023860 39.286 168 80 6 18 183 10 157 2.77e-30 118
MS.gene040552.t1 MTR_8g023900 36.313 179 94 6 9 185 1 161 1.05e-27 112
MS.gene040552.t1 MTR_8g023900 38.415 164 80 5 24 185 196 340 3.27e-27 110
MS.gene040552.t1 MTR_7g105170 34.270 178 102 6 18 190 2 169 1.59e-27 107
MS.gene040552.t1 MTR_2g086690 37.576 165 87 5 23 182 6 159 1.85e-27 107
MS.gene040552.t1 MTR_3g096140 36.667 150 79 3 37 185 2 136 1.98e-26 106
MS.gene040552.t1 MTR_8g023930 36.471 170 86 6 18 185 22 171 1.17e-25 106
MS.gene040552.t1 MTR_4g094302 31.707 164 96 4 23 186 13 160 9.84e-25 98.6
MS.gene040552.t1 MTR_8g094580 44.643 112 50 3 74 185 5 104 4.49e-24 97.8
MS.gene040552.t1 MTR_4g094302 36.434 129 71 3 23 151 13 130 4.56e-24 95.9
MS.gene040552.t1 MTR_7g083330 34.839 155 81 7 1 149 1 141 1.43e-19 85.1
MS.gene040552.t1 MTR_7g070140 50.000 80 38 1 75 154 17 94 2.13e-19 82.8
MS.gene040552.t1 MTR_8g023880 32.692 208 93 10 24 215 10 186 9.65e-19 84.3
MS.gene040552.t1 MTR_7g083370 33.333 135 80 6 17 149 7 133 1.19e-17 78.2
MS.gene040552.t1 MTR_7g083360 34.286 140 84 5 19 156 7 140 6.57e-17 76.6
MS.gene040552.t1 MTR_8g093790 30.675 163 77 7 23 185 12 138 9.27e-17 77.0
MS.gene040552.t1 MTR_1g087190 67.391 46 14 1 23 67 7 52 1.56e-16 72.8
MS.gene040552.t1 MTR_3g096400 30.303 165 95 6 23 182 9 158 7.64e-16 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040552.t1 AT2G43000 70.286 175 37 4 16 190 13 172 7.35e-84 253
MS.gene040552.t1 AT3G12910 57.798 218 76 6 16 230 16 220 5.04e-80 245
MS.gene040552.t1 AT5G39820 54.245 212 77 6 18 213 17 224 7.26e-72 225
MS.gene040552.t1 AT1G26870 61.310 168 60 3 18 185 13 175 2.14e-67 216
MS.gene040552.t1 AT2G02450 49.215 191 76 7 22 211 52 222 2.71e-53 178
MS.gene040552.t1 AT2G02450 49.215 191 76 7 22 211 52 222 3.81e-53 179
MS.gene040552.t1 AT3G04070 48.588 177 77 4 23 186 12 187 5.98e-53 177
MS.gene040552.t1 AT3G04070 50.909 165 75 4 23 186 12 171 7.85e-53 176
MS.gene040552.t1 AT1G61110 48.333 180 78 4 23 196 18 188 3.07e-51 171
MS.gene040552.t1 AT1G69490 51.534 163 67 4 23 185 11 161 3.50e-50 167
MS.gene040552.t1 AT1G01720 50.867 173 71 5 23 194 9 168 9.86e-49 164
MS.gene040552.t1 AT3G15510 42.254 213 93 6 25 214 21 226 1.04e-48 166
MS.gene040552.t1 AT4G27410 47.283 184 80 5 23 205 16 183 1.77e-48 164
MS.gene040552.t1 AT1G52890 48.404 188 76 5 23 208 16 184 2.32e-48 164
MS.gene040552.t1 AT5G08790 40.455 220 107 7 24 238 10 210 5.41e-48 162
MS.gene040552.t1 AT3G15500 50.581 172 65 4 23 192 16 169 5.52e-48 163
MS.gene040552.t1 AT1G71930 36.823 277 132 9 23 284 11 259 1.09e-46 160
MS.gene040552.t1 AT1G71930 36.823 277 132 9 23 284 11 259 1.09e-46 160
MS.gene040552.t1 AT5G63790 47.368 171 78 5 24 194 63 221 1.58e-46 159
MS.gene040552.t1 AT5G63790 47.368 171 78 5 24 194 53 211 1.68e-46 159
MS.gene040552.t1 AT1G12260 44.886 176 77 4 20 193 7 164 3.14e-46 159
MS.gene040552.t1 AT1G12260 44.886 176 77 4 20 193 7 164 4.71e-46 160
MS.gene040552.t1 AT5G61430 46.591 176 78 5 19 194 15 174 9.32e-46 157
MS.gene040552.t1 AT2G43000 72.897 107 15 3 84 190 2 94 9.91e-46 153
MS.gene040552.t1 AT5G62380 44.643 168 74 3 23 188 9 159 1.24e-45 157
MS.gene040552.t1 AT5G62380 44.643 168 74 3 23 188 9 159 1.24e-45 157
MS.gene040552.t1 AT4G27410 43.500 200 81 6 23 205 16 200 2.32e-45 156
MS.gene040552.t1 AT1G77450 49.123 171 72 7 23 192 12 168 4.35e-45 153
MS.gene040552.t1 AT5G07680 45.506 178 80 5 16 191 11 173 5.39e-45 155
MS.gene040552.t1 AT5G39610 44.751 181 85 4 12 191 10 176 6.52e-45 154
MS.gene040552.t1 AT3G04060 45.503 189 82 6 19 201 19 192 7.34e-45 155
MS.gene040552.t1 AT5G07680 45.977 174 77 5 19 191 2 159 7.99e-45 154
MS.gene040552.t1 AT5G13180 46.023 176 76 4 9 183 1 158 8.40e-45 152
MS.gene040552.t1 AT4G36160 44.886 176 77 4 12 185 6 163 1.39e-44 155
MS.gene040552.t1 AT4G36160 44.886 176 77 4 12 185 2 159 1.62e-44 155
MS.gene040552.t1 AT4G36160 44.886 176 77 4 12 185 2 159 1.62e-44 155
MS.gene040552.t1 AT2G17040 32.609 276 162 4 19 288 4 261 1.94e-44 152
MS.gene040552.t1 AT5G18270 47.337 169 73 5 19 186 20 173 5.76e-44 153
MS.gene040552.t1 AT2G18060 44.444 171 75 4 20 188 9 161 5.84e-44 154
MS.gene040552.t1 AT2G18060 44.444 171 75 4 20 188 9 161 5.84e-44 154
MS.gene040552.t1 AT1G62700 45.029 171 74 4 20 188 7 159 9.02e-44 154
MS.gene040552.t1 AT1G62700 45.029 171 74 4 20 188 7 159 9.02e-44 154
MS.gene040552.t1 AT1G52880 51.220 164 76 3 25 188 21 180 9.95e-44 152
MS.gene040552.t1 AT3G03200 37.097 248 132 7 23 265 8 236 1.38e-43 155
MS.gene040552.t1 AT3G17730 44.848 165 75 3 23 186 8 157 1.69e-43 149
MS.gene040552.t1 AT5G18270 46.746 169 74 5 19 186 20 173 1.99e-43 151
MS.gene040552.t1 AT1G65910 43.229 192 80 5 23 212 8 172 3.61e-43 156
MS.gene040552.t1 AT2G33480 46.988 166 69 4 23 188 17 163 4.93e-43 149
MS.gene040552.t1 AT3G18400 44.000 175 80 5 17 191 2 158 5.76e-43 150
MS.gene040552.t1 AT2G46770 43.275 171 81 4 23 185 18 180 6.27e-43 151
MS.gene040552.t1 AT3G29035 49.682 157 71 4 14 168 16 166 7.35e-43 149
MS.gene040552.t1 AT2G33480 46.988 166 67 4 23 188 17 161 1.04e-42 147
MS.gene040552.t1 AT3G61910 42.857 168 88 3 23 186 13 176 1.52e-42 149
MS.gene040552.t1 AT5G17260 40.500 200 101 5 23 221 8 190 3.03e-42 151
MS.gene040552.t1 AT2G24430 43.575 179 83 6 16 193 12 173 4.98e-42 147
MS.gene040552.t1 AT2G24430 43.575 179 83 6 16 193 12 173 4.98e-42 147
MS.gene040552.t1 AT1G76420 43.429 175 81 5 23 196 24 181 5.45e-42 147
MS.gene040552.t1 AT3G12977 39.815 216 96 7 23 238 20 201 5.81e-42 146
MS.gene040552.t1 AT5G66300 42.614 176 80 5 23 193 14 173 7.40e-42 146
MS.gene040552.t1 AT1G54330 44.318 176 75 4 23 197 8 161 1.15e-41 146
MS.gene040552.t1 AT1G32510 40.838 191 99 4 23 209 8 188 2.07e-41 145
MS.gene040552.t1 AT3G15170 43.503 177 87 4 16 191 15 179 4.84e-41 144
MS.gene040552.t1 AT3G10500 44.706 170 78 4 23 191 11 165 9.06e-41 149
MS.gene040552.t1 AT1G79580 41.818 165 77 4 23 185 19 166 1.10e-40 145
MS.gene040552.t1 AT1G79580 41.818 165 77 4 23 185 19 166 1.10e-40 145
MS.gene040552.t1 AT1G79580 41.818 165 77 4 23 185 19 166 1.10e-40 145
MS.gene040552.t1 AT1G79580 41.818 165 77 4 23 185 19 166 1.10e-40 145
MS.gene040552.t1 AT1G79580 41.818 165 77 4 23 185 19 166 1.10e-40 145
MS.gene040552.t1 AT5G46590 49.231 130 62 2 23 151 8 134 2.32e-40 142
MS.gene040552.t1 AT5G46590 49.231 130 62 2 23 151 8 134 3.79e-40 142
MS.gene040552.t1 AT4G17980 44.242 165 80 4 23 186 8 161 7.61e-40 140
MS.gene040552.t1 AT1G32770 40.556 180 93 5 23 196 18 189 1.07e-39 142
MS.gene040552.t1 AT4G17980 44.242 165 80 4 23 186 8 161 1.43e-39 140
MS.gene040552.t1 AT4G10350 42.105 171 80 5 20 187 9 163 1.89e-39 141
MS.gene040552.t1 AT5G04410 46.667 165 72 5 23 186 11 160 2.06e-39 145
MS.gene040552.t1 AT3G10480 43.030 165 78 4 23 186 29 178 3.53e-39 143
MS.gene040552.t1 AT1G56010 43.976 166 79 4 23 187 21 173 3.98e-39 140
MS.gene040552.t1 AT3G10480 43.030 165 79 4 23 186 29 179 4.23e-39 142
MS.gene040552.t1 AT2G27300 40.940 149 84 1 22 170 15 159 1.56e-38 139
MS.gene040552.t1 AT1G33280 42.424 165 75 4 23 185 10 156 3.66e-38 137
MS.gene040552.t1 AT3G10490 41.212 165 82 5 23 186 29 179 1.63e-37 133
MS.gene040552.t1 AT3G44290 42.188 128 70 1 22 149 15 138 2.29e-37 132
MS.gene040552.t1 AT1G34190 49.231 130 61 2 23 151 18 143 2.40e-37 139
MS.gene040552.t1 AT5G53950 50.365 137 64 3 15 151 12 144 5.20e-37 135
MS.gene040552.t1 AT4G35580 49.645 141 64 4 18 157 7 141 5.21e-37 138
MS.gene040552.t1 AT4G35580 49.645 141 64 4 18 157 7 141 6.19e-37 138
MS.gene040552.t1 AT4G35580 49.645 141 64 4 18 157 7 141 6.77e-37 138
MS.gene040552.t1 AT1G34180 49.231 130 61 2 23 151 18 143 8.25e-37 136
MS.gene040552.t1 AT5G22290 42.969 128 69 1 22 149 22 145 1.17e-36 134
MS.gene040552.t1 AT3G10490 41.212 165 82 5 23 186 29 179 1.29e-36 136
MS.gene040552.t1 AT3G44290 42.188 128 70 1 22 149 15 138 1.85e-36 133
MS.gene040552.t1 AT1G34180 49.231 130 61 2 23 151 18 143 2.87e-36 136
MS.gene040552.t1 AT5G09330 38.788 165 85 3 23 186 8 157 5.22e-36 135
MS.gene040552.t1 AT5G09330 38.788 165 85 3 23 186 8 157 5.22e-36 135
MS.gene040552.t1 AT5G09330 38.788 165 85 3 23 186 8 157 5.22e-36 135
MS.gene040552.t1 AT5G09330 38.788 165 85 3 23 186 8 157 5.22e-36 135
MS.gene040552.t1 AT5G09330 38.788 165 85 3 23 186 8 157 5.22e-36 135
MS.gene040552.t1 AT1G33060 48.485 132 62 3 20 150 24 150 6.37e-36 136
MS.gene040552.t1 AT1G33060 48.485 132 62 3 20 150 24 150 7.02e-36 136
MS.gene040552.t1 AT5G64060 32.710 214 128 3 23 235 8 206 5.72e-35 130
MS.gene040552.t1 AT1G34180 45.070 142 61 2 23 151 18 155 5.73e-35 132
MS.gene040552.t1 AT1G34180 45.070 142 61 2 23 151 18 155 1.42e-34 132
MS.gene040552.t1 AT3G10480 37.374 198 76 5 23 186 29 212 1.01e-33 129
MS.gene040552.t1 AT3G49530 45.390 141 72 4 11 150 4 140 1.26e-33 127
MS.gene040552.t1 AT5G24590 49.618 131 61 3 22 150 13 140 1.36e-33 128
MS.gene040552.t1 AT3G49530 45.390 141 72 4 11 150 4 140 4.85e-33 126
MS.gene040552.t1 AT5G04395 39.333 150 77 3 14 151 22 169 6.63e-31 114
MS.gene040552.t1 AT4G28530 40.000 180 72 6 23 185 12 172 6.27e-30 116
MS.gene040552.t1 AT5G64530 34.091 176 90 6 23 191 5 161 6.30e-28 107
MS.gene040552.t1 AT5G61430 46.281 121 51 3 74 194 5 111 7.66e-28 108
MS.gene040552.t1 AT1G32870 46.923 130 62 3 23 151 12 135 2.04e-27 111
MS.gene040552.t1 AT5G22380 31.556 225 124 8 18 228 3 211 2.15e-27 107
MS.gene040552.t1 AT1G32870 46.923 130 62 3 23 151 12 135 2.23e-27 111
MS.gene040552.t1 AT1G32870 46.923 130 62 3 23 151 48 171 3.17e-27 111
MS.gene040552.t1 AT3G12977 40.000 170 67 7 69 238 14 148 4.25e-27 105
MS.gene040552.t1 AT5G64530 40.000 130 63 4 23 152 5 119 2.79e-26 102
MS.gene040552.t1 AT3G44350 37.356 174 86 7 24 190 8 165 2.87e-26 103
MS.gene040552.t1 AT3G44350 41.259 143 71 5 24 159 8 144 3.04e-26 101
MS.gene040552.t1 AT4G01550 40.909 132 75 3 22 151 5 135 7.12e-24 101
MS.gene040552.t1 AT4G01540 42.105 133 73 4 22 151 5 136 9.92e-24 100
MS.gene040552.t1 AT4G01540 42.105 133 73 4 22 151 5 136 1.78e-23 99.8
MS.gene040552.t1 AT4G01520 40.458 131 74 4 24 151 7 136 1.99e-23 97.8
MS.gene040552.t1 AT4G01540 42.105 133 73 4 22 151 5 136 2.08e-23 99.4
MS.gene040552.t1 AT4G01540 42.105 133 73 4 22 151 5 136 2.35e-23 99.8
MS.gene040552.t1 AT1G56010 42.857 119 54 3 69 187 2 106 3.33e-23 96.3
MS.gene040552.t1 AT2G33480 43.478 115 50 3 74 188 7 106 6.08e-22 91.7
MS.gene040552.t1 AT1G02230 39.850 133 73 5 24 153 6 134 2.60e-20 90.1
MS.gene040552.t1 AT4G10350 41.228 114 51 3 75 187 18 116 2.80e-20 89.0
MS.gene040552.t1 AT1G02250 40.310 129 70 5 24 149 6 130 6.16e-20 89.0
MS.gene040552.t1 AT3G04420 37.984 129 73 4 24 149 6 130 3.35e-19 85.9
MS.gene040552.t1 AT3G04420 37.984 129 73 4 24 149 6 130 9.42e-19 85.5
MS.gene040552.t1 AT4G28530 42.991 107 42 3 23 112 12 116 2.01e-17 81.3
MS.gene040552.t1 AT5G50820 35.556 135 72 5 23 154 19 141 2.18e-17 79.0
MS.gene040552.t1 AT5G14000 29.677 155 99 4 14 165 7 154 3.11e-16 75.1
MS.gene040552.t1 AT5G14000 29.870 154 98 4 14 164 7 153 2.67e-15 73.6
MS.gene040552.t1 AT1G02220 36.434 129 72 5 24 149 6 127 7.36e-15 74.7
MS.gene040552.t1 AT2G18060 39.326 89 37 2 100 188 2 73 7.84e-15 73.6
MS.gene040552.t1 AT1G01010 35.220 159 87 8 24 169 6 161 9.73e-15 74.3
MS.gene040552.t1 AT3G56530 30.882 136 88 2 23 156 54 185 1.60e-13 70.1

Find 45 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGTTATCATTTGATAAT+TGG 0.118959 2.3:-27039421 MS.gene040552:CDS
TAACACCATCACCAAATATT+TGG 0.162351 2.3:-27039463 MS.gene040552:CDS
TCTATGGCATGCAGGAAATT+TGG 0.174862 2.3:-27039736 MS.gene040552:intron
CAACAAACATATATAAATTT+TGG 0.178717 2.3:-27039578 MS.gene040552:CDS
TCCTGCTTAATCCAAATATT+TGG 0.198103 2.3:+27039452 None:intergenic
GAGTGACTGGCTCTGGATTT+TGG 0.217161 2.3:-27040890 MS.gene040552:CDS
CTCCATATTGTTGTTCATTC+TGG 0.222827 2.3:+27039613 None:intergenic
CCAGAGCCAGTCACTCTATT+TGG 0.315771 2.3:+27040897 None:intergenic
GATGATGATGTTCCACTTCC+TGG 0.336439 2.3:-27042449 MS.gene040552:CDS
ATGCATCATCCAATCAGTTT+TGG 0.355638 2.3:+27040758 None:intergenic
TTGATAAGATCAATAGCAAT+AGG 0.382635 2.3:+27042359 None:intergenic
GTTGTTATCATTTGATAATT+GGG 0.385673 2.3:-27039420 MS.gene040552:CDS
GCCAAAGAGGAAGAAAATAT+AGG 0.410785 2.3:-27040932 MS.gene040552:CDS
CACCAGAATGAACAACAATA+TGG 0.411184 2.3:-27039615 MS.gene040552:CDS
CCAAATAGAGTGACTGGCTC+TGG 0.412912 2.3:-27040897 MS.gene040552:CDS
ATATCTACAAATATGATCCT+TGG 0.441210 2.3:-27042328 MS.gene040552:CDS
ACCAAATATTTGGATTAAGC+AGG 0.451212 2.3:-27039453 MS.gene040552:CDS
AATTATACTATTTACAAACT+AGG 0.458098 2.3:+27039359 None:intergenic
TTTGATAATTGGGATGAGCT+TGG 0.467447 2.3:-27039410 MS.gene040552:CDS
GACAAAGCAATATACTCAAA+TGG 0.469362 2.3:-27040852 MS.gene040552:CDS
TATCTACAAATATGATCCTT+GGG 0.485955 2.3:-27042327 MS.gene040552:CDS
AGTAACAAGTTCTTCATCAG+TGG 0.489640 2.3:+27042412 None:intergenic
GAAAAGGCACCAAAACTGAT+TGG 0.493016 2.3:-27040767 MS.gene040552:CDS
GTTTACTATCGTGGTAGTGC+CGG 0.501396 2.3:-27040789 MS.gene040552:CDS
AAATGTAGCTGGAGCAGAGA+AGG 0.513323 2.3:-27040970 MS.gene040552:CDS
TATCGTGGTAGTGCCGGAAA+AGG 0.518878 2.3:-27040783 MS.gene040552:CDS
TATGCAGAAGCAAATGTAGC+TGG 0.529620 2.3:-27040981 MS.gene040552:intron
ATATACTCAAATGGAGGAGA+AGG 0.533042 2.3:-27040843 MS.gene040552:CDS
GTGGGATGGAATCGAAATCC+AGG 0.534091 2.3:+27042431 None:intergenic
AGAGAAGATGGGTGTGAACG+AGG 0.535024 2.3:-27042504 None:intergenic
TGGAATCGAAATCCAGGAAG+TGG 0.540063 2.3:+27042437 None:intergenic
AAAACACTTGTTTACTATCG+TGG 0.541680 2.3:-27040798 MS.gene040552:CDS
GTTAGACCAAATAGAGTGAC+TGG 0.567495 2.3:-27040903 MS.gene040552:CDS
CAAGTTCTTCATCAGTGGGA+TGG 0.573307 2.3:+27042417 None:intergenic
GTAACAAGTTCTTCATCAGT+GGG 0.577779 2.3:+27042413 None:intergenic
GGAGAAGGAAATGATTGTGT+TGG 0.583944 2.3:-27040828 MS.gene040552:CDS
AACATACTTGGAAGATCCCA+AGG 0.589388 2.3:+27042311 None:intergenic
ATCAGCATCATTCTTAGCAT+AGG 0.603706 2.3:+27040692 None:intergenic
TTAATCCAAATATTTGGTGA+TGG 0.619082 2.3:+27039458 None:intergenic
ATGAGCTTGGATCAGTTGTG+AGG 0.626748 2.3:-27039397 MS.gene040552:CDS
CATGAATGTGATGATGTCCA+TGG 0.639287 2.3:+27039549 None:intergenic
AAAGCAATATACTCAAATGG+AGG 0.648134 2.3:-27040849 MS.gene040552:CDS
TCAAAAGAAATGTATCACAA+AGG 0.663587 2.3:-27039697 MS.gene040552:CDS
TGTGAACGAGGATTTCAACA+TGG 0.689393 2.3:-27042492 MS.gene040552:CDS
TGGACATCATCACATTCATG+AGG 0.690719 2.3:-27039546 MS.gene040552:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTGTAAAAATTATGT+AGG + chr2.3:27041320-27041339 None:intergenic 10.0%
!! ATAAAATAATTAAGGATTAA+AGG + chr2.3:27041674-27041693 None:intergenic 10.0%
!! TAAAATAATTAAGGATTAAA+GGG + chr2.3:27041673-27041692 None:intergenic 10.0%
!!! ATTATTTTATTATTTTCTCT+TGG - chr2.3:27041684-27041703 MS.gene040552:intron 10.0%
!! AAAAAAAAGAAAGAAAAGAA+TGG + chr2.3:27040204-27040223 None:intergenic 15.0%
!! AAAAAAAGAAAGAAAAGAAT+GGG + chr2.3:27040203-27040222 None:intergenic 15.0%
!! ATAATGAAAAGGAAAAATAA+AGG + chr2.3:27040833-27040852 None:intergenic 15.0%
!! CAATACTTAGATTTATAAAA+AGG + chr2.3:27039925-27039944 None:intergenic 15.0%
!!! CAACAAACATATATAAATTT+TGG - chr2.3:27042289-27042308 MS.gene040552:intron 15.0%
!!! TTATTTTTCCTTTTCATTAT+AGG - chr2.3:27040833-27040852 MS.gene040552:CDS 15.0%
!!! TTTTTACAAATTTTGTACAT+AGG - chr2.3:27041326-27041345 MS.gene040552:intron 15.0%
!! AAATTTATAGATAGTATGAG+AGG - chr2.3:27041546-27041565 MS.gene040552:intron 20.0%
!! CTCATACTATCTATAAATTT+GGG + chr2.3:27041546-27041565 None:intergenic 20.0%
!! TACATACAATAAAAGTTTGA+TGG + chr2.3:27041235-27041254 None:intergenic 20.0%
!! TATAGTTACCTATAATGAAA+AGG + chr2.3:27040844-27040863 None:intergenic 20.0%
!! TCTCATACTATCTATAAATT+TGG + chr2.3:27041547-27041566 None:intergenic 20.0%
!! TGATCATGATTATCAATAAT+TGG - chr2.3:27039896-27039915 MS.gene040552:intron 20.0%
!!! AATATTTTCACATAGAATCA+GGG + chr2.3:27040735-27040754 None:intergenic 20.0%
!!! AATATTTTTCAGTGTAATTG+AGG + chr2.3:27040761-27040780 None:intergenic 20.0%
!!! AGTTGTTATCATTTGATAAT+TGG - chr2.3:27042446-27042465 MS.gene040552:CDS 20.0%
!!! ATAAGCAAGAGTATTATTAA+TGG - chr2.3:27042006-27042025 MS.gene040552:intron 20.0%
!!! ATCTGAGATTAAATTATTAG+TGG + chr2.3:27040708-27040727 None:intergenic 20.0%
!!! CATAATGTGAAATCATATTT+TGG - chr2.3:27040297-27040316 MS.gene040552:intron 20.0%
!!! CATTTTTTTTTTTTTACTGC+TGG - chr2.3:27039868-27039887 MS.gene040552:intron 20.0%
!!! GTATGTATATATGTTGATTT+TGG - chr2.3:27041248-27041267 MS.gene040552:intron 20.0%
!!! GTTGTTATCATTTGATAATT+GGG - chr2.3:27042447-27042466 MS.gene040552:CDS 20.0%
!!! TAAGCAAGAGTATTATTAAT+GGG - chr2.3:27042007-27042026 MS.gene040552:intron 20.0%
!!! TAATATTTTCACATAGAATC+AGG + chr2.3:27040736-27040755 None:intergenic 20.0%
!!! TCTGAGATTAAATTATTAGT+GGG + chr2.3:27040707-27040726 None:intergenic 20.0%
! AAACATAATATTCTATGCAG+GGG - chr2.3:27040132-27040151 MS.gene040552:intron 25.0%
! ACAAACATAATATTCTATGC+AGG - chr2.3:27040130-27040149 MS.gene040552:intron 25.0%
! ACACAAACTATAAGGAAAAA+TGG - chr2.3:27039718-27039737 MS.gene040552:CDS 25.0%
! ATACAATAAAAGTTTGATGG+TGG + chr2.3:27041232-27041251 None:intergenic 25.0%
! ATATATAGAGAGAATTACGT+GGG + chr2.3:27040788-27040807 None:intergenic 25.0%
! ATATCTACAAATATGATCCT+TGG - chr2.3:27039539-27039558 MS.gene040552:CDS 25.0%
! ATTATTAATGGGGATTACAA+GGG - chr2.3:27042018-27042037 MS.gene040552:intron 25.0%
! CAAACATAATATTCTATGCA+GGG - chr2.3:27040131-27040150 MS.gene040552:intron 25.0%
! CATTCTCAATCTTATAAAAC+CGG + chr2.3:27041521-27041540 None:intergenic 25.0%
! CTGAGATTAAATTATTAGTG+GGG + chr2.3:27040706-27040725 None:intergenic 25.0%
! CTTGAATGTAGTTATAACTA+AGG + chr2.3:27039809-27039828 None:intergenic 25.0%
! TATATATAGAGAGAATTACG+TGG + chr2.3:27040789-27040808 None:intergenic 25.0%
! TATCTACAAATATGATCCTT+GGG - chr2.3:27039540-27039559 MS.gene040552:CDS 25.0%
! TATTATTAATGGGGATTACA+AGG - chr2.3:27042017-27042036 MS.gene040552:intron 25.0%
! TCAAAAGAAATGTATCACAA+AGG - chr2.3:27042170-27042189 MS.gene040552:intron 25.0%
! TCTAAATGACACAAACTATA+AGG - chr2.3:27039710-27039729 MS.gene040552:CDS 25.0%
! TTATAAAACCGGCTAATAAA+AGG + chr2.3:27041510-27041529 None:intergenic 25.0%
! TTGATAAGATCAATAGCAAT+AGG + chr2.3:27039511-27039530 None:intergenic 25.0%
!! ACTTTAGATTAGTTAATGTG+AGG - chr2.3:27041596-27041615 MS.gene040552:intron 25.0%
!! ATATTTTCACATAGAATCAG+GGG + chr2.3:27040734-27040753 None:intergenic 25.0%
!! CTTTAGATTAGTTAATGTGA+GGG - chr2.3:27041597-27041616 MS.gene040552:intron 25.0%
!! TTAATCCAAATATTTGGTGA+TGG + chr2.3:27042412-27042431 None:intergenic 25.0%
!! TTTAGATTAGTTAATGTGAG+GGG - chr2.3:27041598-27041617 MS.gene040552:intron 25.0%
!! TTTTGTCTTAATCATCTTTC+TGG - chr2.3:27039836-27039855 MS.gene040552:intron 25.0%
!!! AAGCAAGAGTATTATTAATG+GGG - chr2.3:27042008-27042027 MS.gene040552:intron 25.0%
!!! AATGTTTGTTTTGACATCAA+TGG + chr2.3:27041154-27041173 None:intergenic 25.0%
!!! CACATTTTTCACTTTTTCTT+GGG - chr2.3:27041398-27041417 MS.gene040552:intron 25.0%
!!! GGAAGTAAGACTAAATTTTT+TGG + chr2.3:27040666-27040685 None:intergenic 25.0%
!!! GGGGCTATTTTTTTTTTTAA+AGG + chr2.3:27040687-27040706 None:intergenic 25.0%
!!! TCACATTTTTCACTTTTTCT+TGG - chr2.3:27041397-27041416 MS.gene040552:intron 25.0%
!!! TTAGCTAATTGTTTTATCTG+CGG + chr2.3:27042205-27042224 None:intergenic 25.0%
AAAACACTTGTTTACTATCG+TGG - chr2.3:27041069-27041088 MS.gene040552:intron 30.0%
AAAGCAATATACTCAAATGG+AGG - chr2.3:27041018-27041037 MS.gene040552:intron 30.0%
AAGAAGAAATCACTATCGAA+AGG - chr2.3:27039683-27039702 MS.gene040552:CDS 30.0%
ACCAAATATTTGGATTAAGC+AGG - chr2.3:27042414-27042433 MS.gene040552:CDS 30.0%
AGAAGAAATCACTATCGAAA+GGG - chr2.3:27039684-27039703 MS.gene040552:CDS 30.0%
ATAATCAAACTATGTGTGTC+TGG + chr2.3:27039774-27039793 None:intergenic 30.0%
ATGTTTCATGTTGATCGTAA+TGG + chr2.3:27042054-27042073 None:intergenic 30.0%
GACAAAGCAATATACTCAAA+TGG - chr2.3:27041015-27041034 MS.gene040552:intron 30.0%
TAACACCATCACCAAATATT+TGG - chr2.3:27042404-27042423 MS.gene040552:CDS 30.0%
TAATCAAACTATGTGTGTCT+GGG + chr2.3:27039773-27039792 None:intergenic 30.0%
TAGGTTAATTCTTACACACA+TGG - chr2.3:27041345-27041364 MS.gene040552:intron 30.0%
TAGTTAGATGACAACATACT+TGG + chr2.3:27039571-27039590 None:intergenic 30.0%
TCCTGCTTAATCCAAATATT+TGG + chr2.3:27042418-27042437 None:intergenic 30.0%
TGCCATAGACAAAAATCATT+AGG + chr2.3:27042120-27042139 None:intergenic 30.0%
TGTTTCATGTTGATCGTAAT+GGG + chr2.3:27042053-27042072 None:intergenic 30.0%
TTGCAAGCATTATAGCTTAT+TGG + chr2.3:27040497-27040516 None:intergenic 30.0%
! GTCCTAATGATTTTTGTCTA+TGG - chr2.3:27042115-27042134 MS.gene040552:intron 30.0%
! TCCTATATTTTCTTCCTCTT+TGG + chr2.3:27040939-27040958 None:intergenic 30.0%
!!! GAAATCATATTTTGGTCTAG+TGG - chr2.3:27040305-27040324 MS.gene040552:intron 30.0%
!!! TGTTACTTTTTTTGCCAAAG+AGG - chr2.3:27040922-27040941 MS.gene040552:CDS 30.0%
AAAGAAAGAAAAGAATGGGC+TGG + chr2.3:27040199-27040218 None:intergenic 35.0%
AGTAACAAGTTCTTCATCAG+TGG + chr2.3:27039458-27039477 None:intergenic 35.0%
ATATACTCAAATGGAGGAGA+AGG - chr2.3:27041024-27041043 MS.gene040552:intron 35.0%
ATCAGCATCATTCTTAGCAT+AGG + chr2.3:27041178-27041197 None:intergenic 35.0%
CACCAGAATGAACAACAATA+TGG - chr2.3:27042252-27042271 MS.gene040552:intron 35.0%
CATTTGTGTTTGGTTGTTGT+CGG - chr2.3:27040333-27040352 MS.gene040552:intron 35.0%
GAAATGTTAATGAGTGCCTT+CGG + chr2.3:27041978-27041997 None:intergenic 35.0%
GAAGAAATCACTATCGAAAG+GGG - chr2.3:27039685-27039704 MS.gene040552:CDS 35.0%
GATAACCAAGTCAATGTGTT+TGG + chr2.3:27040472-27040491 None:intergenic 35.0%
GCCAAAGAGGAAGAAAATAT+AGG - chr2.3:27040935-27040954 MS.gene040552:CDS 35.0%
GTAACAAGTTCTTCATCAGT+GGG + chr2.3:27039457-27039476 None:intergenic 35.0%
! AAGAAAGAAAAGAATGGGCT+GGG + chr2.3:27040198-27040217 None:intergenic 35.0%
! ATGCATCATCCAATCAGTTT+TGG + chr2.3:27041112-27041131 None:intergenic 35.0%
! CTCCATATTGTTGTTCATTC+TGG + chr2.3:27042257-27042276 None:intergenic 35.0%
! TAATCATCTTTCTGGAGAAG+TGG - chr2.3:27039844-27039863 MS.gene040552:intron 35.0%
! TTTGATAATTGGGATGAGCT+TGG - chr2.3:27042457-27042476 MS.gene040552:CDS 35.0%
!! ATAAATTTTGGTGCAAGCCA+TGG - chr2.3:27042301-27042320 MS.gene040552:intron 35.0%
!! GTTTTGACATCAATGGTTGA+TGG + chr2.3:27041147-27041166 None:intergenic 35.0%
AACATACTTGGAAGATCCCA+AGG + chr2.3:27039559-27039578 None:intergenic 40.0%
ATAATATTCTATGCAGGGGC+GGG - chr2.3:27040136-27040155 MS.gene040552:intron 40.0%
CATAATATTCTATGCAGGGG+CGG - chr2.3:27040135-27040154 MS.gene040552:intron 40.0%
GGAGAAGGAAATGATTGTGT+TGG - chr2.3:27041039-27041058 MS.gene040552:intron 40.0%
GTTAGACCAAATAGAGTGAC+TGG - chr2.3:27040964-27040983 MS.gene040552:CDS 40.0%
TATGCAGAAGCAAATGTAGC+TGG - chr2.3:27040886-27040905 MS.gene040552:CDS 40.0%
TCTATGGCATGCAGGAAATT+TGG - chr2.3:27042131-27042150 MS.gene040552:intron 40.0%
TGATCAGTCATCAGCTACAA+AGG - chr2.3:27040037-27040056 MS.gene040552:intron 40.0%
TGGACATCATCACATTCATG+AGG - chr2.3:27042321-27042340 MS.gene040552:CDS 40.0%
TGTGAACGAGGATTTCAACA+TGG - chr2.3:27039375-27039394 MS.gene040552:CDS 40.0%
! CATGAATGTGATGATGTCCA+TGG + chr2.3:27042321-27042340 None:intergenic 40.0%
! GAACTCCAAACACATTGACT+TGG - chr2.3:27040464-27040483 MS.gene040552:intron 40.0%
! GATTTTTGTCTATGGCATGC+AGG - chr2.3:27042123-27042142 MS.gene040552:intron 40.0%
! TTACCTCGCCTTTTATTAGC+CGG - chr2.3:27041499-27041518 MS.gene040552:intron 40.0%
! TTTTCACATAGAATCAGGGG+CGG + chr2.3:27040731-27040750 None:intergenic 40.0%
!! GAAAAGGCACCAAAACTGAT+TGG - chr2.3:27041100-27041119 MS.gene040552:intron 40.0%
!! TCATGTTGATCGTAATGGGT+TGG + chr2.3:27042049-27042068 None:intergenic 40.0%
!! TCTGGATTTTGGAAAGCAAC+TGG - chr2.3:27040988-27041007 MS.gene040552:intron 40.0%
!!! ATCAGTTTTGGTGCCTTTTC+CGG + chr2.3:27041100-27041119 None:intergenic 40.0%
AAACCGGCTAATAAAAGGCG+AGG + chr2.3:27041505-27041524 None:intergenic 45.0%
AAATGTAGCTGGAGCAGAGA+AGG - chr2.3:27040897-27040916 MS.gene040552:CDS 45.0%
AACCCTAGTAGTTCGATAGC+AGG + chr2.3:27041574-27041593 None:intergenic 45.0%
ATGAGCTTGGATCAGTTGTG+AGG - chr2.3:27042470-27042489 MS.gene040552:CDS 45.0%
CAAGTTCTTCATCAGTGGGA+TGG + chr2.3:27039453-27039472 None:intergenic 45.0%
CACCTGCTATCGAACTACTA+GGG - chr2.3:27041569-27041588 MS.gene040552:intron 45.0%
TATGTGTGTGTGTGTGTGTG+TGG - chr2.3:27040546-27040565 MS.gene040552:intron 45.0%
TGGAATCGAAATCCAGGAAG+TGG + chr2.3:27039433-27039452 None:intergenic 45.0%
! GATGATGATGTTCCACTTCC+TGG - chr2.3:27039418-27039437 MS.gene040552:CDS 45.0%
! GTTTACTATCGTGGTAGTGC+CGG - chr2.3:27041078-27041097 MS.gene040552:intron 45.0%
!! AGAAAATAATAAAATAATTA+AGG + chr2.3:27041682-27041701 None:intergenic 5.0%
!! ATAAAAAATTTACTAATTAA+AGG - chr2.3:27041938-27041957 MS.gene040552:intron 5.0%
!! TAAAAAATTTACTAATTAAA+GGG - chr2.3:27041939-27041958 MS.gene040552:intron 5.0%
AGTGGCGCGACATTTGTGTT+TGG - chr2.3:27040323-27040342 MS.gene040552:intron 50.0%
CCAGAGCCAGTCACTCTATT+TGG + chr2.3:27040973-27040992 None:intergenic 50.0%
GCACCTGCTATCGAACTACT+AGG - chr2.3:27041568-27041587 MS.gene040552:intron 50.0%
GTGGGATGGAATCGAAATCC+AGG + chr2.3:27039439-27039458 None:intergenic 50.0%
! CCAAATAGAGTGACTGGCTC+TGG - chr2.3:27040970-27040989 MS.gene040552:CDS 50.0%
! TATCGTGGTAGTGCCGGAAA+AGG - chr2.3:27041084-27041103 MS.gene040552:intron 50.0%
!! AAGAAAAGAATGGGCTGGGC+TGG + chr2.3:27040194-27040213 None:intergenic 50.0%
!!! GAGTGACTGGCTCTGGATTT+TGG - chr2.3:27040977-27040996 MS.gene040552:CDS 50.0%
! GGGCTTAAAGAGTGCACCGA+AGG - chr2.3:27041959-27041978 MS.gene040552:intron 55.0%
!! AAGAATGGGCTGGGCTGGTG+TGG + chr2.3:27040189-27040208 None:intergenic 60.0%
CTATGCAGGGGCGGGTCTGT+GGG - chr2.3:27040144-27040163 MS.gene040552:intron 65.0%
GGTCTGTGGGAGGCTGAGTG+TGG - chr2.3:27040157-27040176 MS.gene040552:intron 65.0%
TCTATGCAGGGGCGGGTCTG+TGG - chr2.3:27040143-27040162 MS.gene040552:intron 65.0%
TGCAGGGGCGGGTCTGTGGG+AGG - chr2.3:27040147-27040166 MS.gene040552:intron 75.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 27039370 27042519 27039370 ID=MS.gene040552
chr2.3 mRNA 27039370 27042519 27039370 ID=MS.gene040552.t1;Parent=MS.gene040552
chr2.3 exon 27042318 27042519 27042318 ID=MS.gene040552.t1.exon1;Parent=MS.gene040552.t1
chr2.3 CDS 27042318 27042519 27042318 ID=cds.MS.gene040552.t1;Parent=MS.gene040552.t1
chr2.3 exon 27040677 27040996 27040677 ID=MS.gene040552.t1.exon2;Parent=MS.gene040552.t1
chr2.3 CDS 27040677 27040996 27040677 ID=cds.MS.gene040552.t1;Parent=MS.gene040552.t1
chr2.3 exon 27039370 27039744 27039370 ID=MS.gene040552.t1.exon3;Parent=MS.gene040552.t1
chr2.3 CDS 27039370 27039744 27039370 ID=cds.MS.gene040552.t1;Parent=MS.gene040552.t1
Gene Sequence

>MS.gene040552

ATGGGTGTGAACGAGGATTTCAACATGGATAATGAATATGTTGCAGATGATGATGATGTTCCACTTCCTGGATTTCGATTCCATCCCACTGATGAAGAACTTGTTACTTTTTATCTTCGAAGAAAACTTGATAAGAAACCTATTGCTATTGATCTTATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAGTATGTTGTCATCTAACTAATACTTTTGCTTTTTCTTTTATAAATTTTCAATTGATTCTTTTATAGTTCACACTTAAATTTACAAATATTAAAGATTAATAAATTTCTTATAAGAAGAAATCACTATCGAAAGGGGTTTCTAAATGACACAAACTATAAGGAAAAATGGAAGAAAAACATGTTGACAATATTTGCATGCCCAGACACACATAGTTTGATTATTGCATACATATACCTTAGTTATAACTACATTCAAGATTTTTCTTTTGTCTTAATCATCTTTCTGGAGAAGTGGTCATTTTTTTTTTTTTACTGCTGGAGACGTGATCATGATTATCAATAATTGGAAACCTTTTTATAAATCTAAGTATTGTGACAATTAATAAGAAAAAGTTATATTAGCTATGAAAATTTTAAAATAGAAAACATGAAATTTGTTACTAAATATATAAAATTGCAATATAGTGATCAGTCATCAGCTACAAAGGAATAATTACAATATATCTTAAATATACATGATTTTTTGCAGACATATAAAAACATGTAAAAGAAAAACACACAAACATAATATTCTATGCAGGGGCGGGTCTGTGGGAGGCTGAGTGTGGCTATTGCCACACCAGCCCAGCCCATTCTTTTCTTTCTTTTTTTTATATACAAAGCATAATTTTTTTTTTTGAAATATAATGAGCATAATTATATAATATATATGTTCTATTTCGAAACATAATGTGAAATCATATTTTGGTCTAGTGGCGCGACATTTGTGTTTGGTTGTTGTCGGTTCAACTTTTAACTTTTGCGTTTTTTTAATAATTTTTTCATGATAATATAAACAACATAAACAAATAAATTTACTTGTAAAAATAAACTCAATGAGAGTCGAACTTGTGAACTCCAAACACATTGACTTGGTTATCTTCCAATAAGCTATAATGCTTGCAATGTTTTTTTTTTTTTTTGCAACTTTGATATATGTGTGTGTGTGTGTGTGTGGCGCGCGCGCGTGAATGTGTGCGTGTGCGCGCGCACGAGTTCTAAGATAAGATTTTGTAACTTACGTTGTGCATTATCTATTAATATTTATTTCTCCAAAAAATTTAGTCTTACTTCCTTTAAAAAAAAAAATAGCCCCACTAATAATTTAATCTCAGATCCGCCCCTGATTCTATGTGAAAATATTATGCCTCAATTACACTGAAAAATATTCTATCCCACGTAATTCTCTCTATATATAGTGCAACTAATATTTGTTCTTCCTTTATTTTTCCTTTTCATTATAGGTAACTATACTAATTAATTAGTTACATACATTATGCAGAAGCAAATGTAGCTGGAGCAGAGAAGGAATGTTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTGACTGGCTCTGGATTTTGGAAAGCAACTGGAATAGACAAAGCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTACTATCGTGGTAGTGCCGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCAACCATTGATGTCAAAACAAACATTTCCTATGCTAAGAATGATGCTGATTATGCTCATGAAGCTGTAAGTAACTTATATACCACCATCAAACTTTTATTGTATGTATATATGTTGATTTTGGAGTAGCTTTGCTCATAAAAGTTTGCTTATCAAAAACAAATATAAGACCTACATAATTTTTACAAATTTTGTACATAGGTTAATTCTTACACACATGGAATTTATTTCTCTCTTTCTAAATTTCTAGTCACATTTTTCACTTTTTCTTGGGATAAACATTCTTTACACTAAAAATTAAATTAGCTAGAGAGACTCATTTAATGAGATATGATTTAAACATGTTTGAGTTTTACCTCGCCTTTTATTAGCCGGTTTTATAAGATTGAGAATGAACCCAAATTTATAGATAGTATGAGAGGCACCTGCTATCGAACTACTAGGGTTGCACTTTAGATTAGTTAATGTGAGGGGATGTAGTGCAAGTCTCACATTTAATTGATGCATGAATAATTTTATCATACCCTTTAATCCTTAATTATTTTATTATTTTCTCTTGGTAGTGACAAAAAAAAAAATAGAGTGCATTTATTTAAACATTTTATTTTAAAAAATGTTAATAGAAATGAAAAGTGCTTGTTATCATCACAATAATCTAACTTGTAAAATTTTCTATCTTACATAAAAATGTAAAAAAAAAAAAAATGTTCTTTAAACATAACAAATTTAGCGATTATTCTTTTAAAAAGTCAACTATTATAATTTCTAATGCACTCAATACACAACTTTTCATAAAAAATTTACTAATTAAAGGGCTTAAAGAGTGCACCGAAGGCACTCATTAACATTTCTCTTTTTTATAAGCAAGAGTATTATTAATGGGGATTACAAGGGTTACTCCAACCCATTACGATCAACATGAAACATCAAATTAATTTATTTTATATTTTTATATTGAACAAACATATGTCCTAATGATTTTTGTCTATGGCATGCAGGAAATTTGGACATTGTGTAGAATTCTCAAAAGAAATGTATCACAAAGGAAACAAATACCGCAGATAAAACAATTAGCTAACAAGCATCAAGTCAGTCATAACACGAGCACCAGAATGAACAACAATATGGAGTTCAACATAAATCAACAAACATATATAAATTTTGGTGCAAGCCATGGACATCATCACATTCATGAGGACAAATCAATCAATAACTATACAAGCAGTGAAAAAAGCAATCAGTTTCATGCAAACAATGTAACACCATCACCAAATATTTGGATTAAGCAGGATGCTAATGAGTTGTTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAGGTTTGCTGTTGATTCACCTAGTTTGTAA
Protein sequence

>MS.gene040552.t1

MGVNEDFNMDNEYVADDDDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKANVAGAEKECYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKAIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSTIDVKTNISYAKNDADYAHEAEIWTLCRILKRNVSQRKQIPQIKQLANKHQVSHNTSTRMNNNMEFNINQQTYINFGASHGHHHIHEDKSINNYTSSEKSNQFHANNVTPSPNIWIKQDANELLSFDNWDELGSVVRFAVDSPSL