Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040602.t1 | XP_003595973.1 | 99 | 307 | 2 | 1 | 1 | 307 | 1 | 306 | 3.50E-178 | 634 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040602.t1 | Q84TE6 | 60.6 | 322 | 101 | 10 | 2 | 305 | 10 | 323 | 1.1e-100 | 367.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040602.t1 | F6KIF1 | 99.0 | 307 | 2 | 1 | 1 | 307 | 1 | 306 | 2.6e-178 | 634.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene040602.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040602.t1 | MTR_2g064470 | 99.023 | 307 | 2 | 1 | 1 | 307 | 1 | 306 | 0.0 | 637 |
MS.gene040602.t1 | MTR_6g084430 | 47.982 | 223 | 108 | 4 | 7 | 226 | 1 | 218 | 1.56e-67 | 214 |
MS.gene040602.t1 | MTR_4g108760 | 44.558 | 294 | 127 | 11 | 1 | 262 | 1 | 290 | 1.69e-67 | 215 |
MS.gene040602.t1 | MTR_1g069805 | 46.862 | 239 | 107 | 5 | 7 | 241 | 6 | 228 | 3.81e-66 | 209 |
MS.gene040602.t1 | MTR_7g097090 | 62.581 | 155 | 49 | 3 | 7 | 157 | 6 | 155 | 5.13e-66 | 209 |
MS.gene040602.t1 | MTR_6g012670 | 47.679 | 237 | 107 | 5 | 10 | 242 | 19 | 242 | 1.55e-65 | 209 |
MS.gene040602.t1 | MTR_7g085260 | 55.721 | 201 | 66 | 8 | 11 | 192 | 17 | 213 | 3.49e-65 | 209 |
MS.gene040602.t1 | MTR_2g078700 | 62.420 | 157 | 54 | 3 | 8 | 159 | 20 | 176 | 1.14e-62 | 203 |
MS.gene040602.t1 | MTR_3g435150 | 51.741 | 201 | 81 | 5 | 1 | 187 | 1 | 199 | 1.17e-61 | 198 |
MS.gene040602.t1 | MTR_6g032770 | 53.723 | 188 | 75 | 5 | 11 | 186 | 18 | 205 | 1.18e-61 | 200 |
MS.gene040602.t1 | MTR_1g008740 | 57.485 | 167 | 62 | 4 | 8 | 168 | 10 | 173 | 2.01e-60 | 196 |
MS.gene040602.t1 | MTR_1g008740 | 57.485 | 167 | 62 | 4 | 8 | 168 | 24 | 187 | 2.98e-60 | 196 |
MS.gene040602.t1 | MTR_3g070030 | 47.768 | 224 | 87 | 7 | 10 | 217 | 18 | 227 | 8.27e-60 | 195 |
MS.gene040602.t1 | MTR_3g109340 | 58.333 | 156 | 56 | 4 | 8 | 158 | 19 | 170 | 8.98e-59 | 192 |
MS.gene040602.t1 | MTR_3g109340 | 58.599 | 157 | 55 | 5 | 8 | 158 | 19 | 171 | 1.09e-57 | 189 |
MS.gene040602.t1 | MTR_2g064090 | 56.707 | 164 | 67 | 2 | 6 | 165 | 1 | 164 | 1.27e-57 | 189 |
MS.gene040602.t1 | MTR_4g036030 | 55.128 | 156 | 60 | 4 | 9 | 158 | 5 | 156 | 1.20e-55 | 184 |
MS.gene040602.t1 | MTR_1g096430 | 53.797 | 158 | 63 | 4 | 7 | 158 | 3 | 156 | 2.88e-55 | 182 |
MS.gene040602.t1 | MTR_4g101680 | 54.321 | 162 | 66 | 3 | 9 | 165 | 5 | 163 | 4.11e-55 | 183 |
MS.gene040602.t1 | MTR_3g116070 | 56.164 | 146 | 59 | 2 | 8 | 148 | 20 | 165 | 1.66e-54 | 181 |
MS.gene040602.t1 | MTR_5g012080 | 42.570 | 249 | 123 | 9 | 1 | 237 | 1 | 241 | 3.61e-54 | 180 |
MS.gene040602.t1 | MTR_5g021710 | 52.532 | 158 | 65 | 4 | 7 | 158 | 4 | 157 | 8.05e-54 | 179 |
MS.gene040602.t1 | MTR_8g076110 | 50.000 | 166 | 73 | 4 | 6 | 165 | 1 | 162 | 1.59e-53 | 177 |
MS.gene040602.t1 | MTR_4g035590 | 52.500 | 160 | 67 | 3 | 4 | 158 | 1 | 156 | 3.85e-53 | 177 |
MS.gene040602.t1 | MTR_7g011130 | 42.424 | 231 | 109 | 7 | 8 | 217 | 16 | 243 | 8.33e-53 | 177 |
MS.gene040602.t1 | MTR_8g024480 | 48.824 | 170 | 74 | 4 | 8 | 164 | 12 | 181 | 2.80e-52 | 177 |
MS.gene040602.t1 | MTR_8g059170 | 35.093 | 322 | 174 | 8 | 6 | 301 | 9 | 321 | 4.19e-52 | 174 |
MS.gene040602.t1 | MTR_7g085220 | 46.199 | 171 | 78 | 3 | 8 | 164 | 5 | 175 | 3.09e-51 | 172 |
MS.gene040602.t1 | MTR_3g064580 | 51.744 | 172 | 76 | 3 | 6 | 173 | 1 | 169 | 4.30e-51 | 179 |
MS.gene040602.t1 | MTR_2g079990 | 50.000 | 166 | 73 | 4 | 6 | 166 | 11 | 171 | 9.43e-51 | 171 |
MS.gene040602.t1 | MTR_2g062730 | 50.955 | 157 | 68 | 4 | 8 | 158 | 7 | 160 | 1.25e-50 | 171 |
MS.gene040602.t1 | MTR_7g011120 | 51.190 | 168 | 58 | 4 | 8 | 158 | 5 | 165 | 2.87e-50 | 169 |
MS.gene040602.t1 | MTR_5g041940 | 50.000 | 154 | 72 | 3 | 10 | 158 | 2 | 155 | 3.76e-50 | 167 |
MS.gene040602.t1 | MTR_7g100990 | 52.201 | 159 | 61 | 4 | 8 | 155 | 8 | 162 | 5.54e-50 | 169 |
MS.gene040602.t1 | MTR_6g477900 | 47.953 | 171 | 84 | 3 | 6 | 172 | 1 | 170 | 2.06e-49 | 164 |
MS.gene040602.t1 | MTR_4g081870 | 48.428 | 159 | 77 | 3 | 5 | 158 | 3 | 161 | 4.27e-49 | 164 |
MS.gene040602.t1 | MTR_2157s0010 | 38.710 | 248 | 127 | 8 | 4 | 238 | 1 | 236 | 4.65e-49 | 164 |
MS.gene040602.t1 | MTR_3g088110 | 40.476 | 252 | 116 | 7 | 8 | 227 | 4 | 253 | 8.66e-49 | 164 |
MS.gene040602.t1 | MTR_5g076850 | 48.087 | 183 | 87 | 5 | 6 | 184 | 1 | 179 | 9.38e-49 | 172 |
MS.gene040602.t1 | MTR_2g080010 | 48.485 | 165 | 71 | 4 | 8 | 158 | 12 | 176 | 2.48e-48 | 165 |
MS.gene040602.t1 | MTR_8g094580 | 40.889 | 225 | 118 | 6 | 10 | 225 | 6 | 224 | 2.54e-48 | 163 |
MS.gene040602.t1 | MTR_7g005280 | 46.739 | 184 | 73 | 6 | 8 | 175 | 12 | 186 | 2.70e-48 | 162 |
MS.gene040602.t1 | MTR_4g089135 | 43.979 | 191 | 81 | 4 | 11 | 175 | 15 | 205 | 1.03e-47 | 163 |
MS.gene040602.t1 | MTR_6g011860 | 50.000 | 164 | 71 | 4 | 11 | 163 | 15 | 178 | 3.60e-47 | 163 |
MS.gene040602.t1 | MTR_2g079990 | 43.684 | 190 | 77 | 4 | 6 | 166 | 11 | 199 | 4.61e-47 | 162 |
MS.gene040602.t1 | MTR_3g070040 | 43.556 | 225 | 97 | 7 | 8 | 217 | 5 | 214 | 1.66e-46 | 160 |
MS.gene040602.t1 | MTR_2g093810 | 48.026 | 152 | 72 | 3 | 11 | 155 | 14 | 165 | 6.73e-46 | 158 |
MS.gene040602.t1 | MTR_8g467490 | 46.784 | 171 | 79 | 4 | 7 | 165 | 10 | 180 | 2.20e-45 | 158 |
MS.gene040602.t1 | MTR_3g096920 | 51.250 | 160 | 71 | 5 | 8 | 162 | 4 | 161 | 4.82e-45 | 155 |
MS.gene040602.t1 | MTR_5g069030 | 49.689 | 161 | 66 | 4 | 10 | 161 | 24 | 178 | 4.72e-44 | 159 |
MS.gene040602.t1 | MTR_5g040420 | 46.341 | 164 | 77 | 3 | 13 | 165 | 16 | 179 | 1.00e-43 | 154 |
MS.gene040602.t1 | MTR_3g093050 | 48.750 | 160 | 67 | 4 | 11 | 161 | 22 | 175 | 7.87e-43 | 155 |
MS.gene040602.t1 | MTR_3g096140 | 49.383 | 162 | 68 | 6 | 6 | 158 | 1 | 157 | 1.01e-42 | 148 |
MS.gene040602.t1 | MTR_3g093050 | 48.750 | 160 | 67 | 4 | 11 | 161 | 22 | 175 | 1.63e-42 | 154 |
MS.gene040602.t1 | MTR_5g014300 | 46.821 | 173 | 67 | 5 | 6 | 162 | 1 | 164 | 2.09e-42 | 149 |
MS.gene040602.t1 | MTR_3g096140 | 49.383 | 162 | 68 | 6 | 6 | 158 | 1 | 157 | 4.36e-42 | 149 |
MS.gene040602.t1 | MTR_0036s0150 | 48.701 | 154 | 68 | 4 | 13 | 159 | 7 | 156 | 2.35e-41 | 150 |
MS.gene040602.t1 | MTR_2g068920 | 36.508 | 252 | 130 | 8 | 13 | 234 | 23 | 274 | 2.44e-41 | 145 |
MS.gene040602.t1 | MTR_4g098630 | 48.538 | 171 | 73 | 6 | 6 | 164 | 1 | 168 | 2.50e-41 | 145 |
MS.gene040602.t1 | MTR_4g134460 | 38.776 | 245 | 133 | 7 | 13 | 251 | 56 | 289 | 3.51e-41 | 148 |
MS.gene040602.t1 | MTR_3g093040 | 39.437 | 213 | 111 | 8 | 1 | 204 | 100 | 303 | 5.12e-41 | 145 |
MS.gene040602.t1 | MTR_1g090723 | 49.342 | 152 | 69 | 4 | 13 | 158 | 10 | 159 | 6.85e-41 | 150 |
MS.gene040602.t1 | MTR_5g090970 | 40.094 | 212 | 93 | 6 | 13 | 195 | 20 | 226 | 1.55e-40 | 144 |
MS.gene040602.t1 | MTR_1g090720 | 47.826 | 161 | 69 | 4 | 11 | 159 | 42 | 199 | 2.35e-40 | 147 |
MS.gene040602.t1 | MTR_3g096920 | 55.814 | 129 | 54 | 3 | 8 | 134 | 4 | 131 | 2.89e-40 | 143 |
MS.gene040602.t1 | MTR_2g068880 | 38.589 | 241 | 108 | 9 | 13 | 225 | 24 | 252 | 3.77e-40 | 142 |
MS.gene040602.t1 | MTR_1g090723 | 48.366 | 153 | 68 | 5 | 13 | 158 | 10 | 158 | 8.84e-40 | 147 |
MS.gene040602.t1 | MTR_1g090723 | 48.052 | 154 | 69 | 5 | 13 | 159 | 10 | 159 | 1.11e-39 | 146 |
MS.gene040602.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 3.24e-38 | 138 |
MS.gene040602.t1 | MTR_5g090970 | 39.623 | 212 | 93 | 7 | 13 | 195 | 20 | 225 | 4.02e-38 | 137 |
MS.gene040602.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 5.54e-38 | 139 |
MS.gene040602.t1 | MTR_8g063550 | 43.671 | 158 | 82 | 4 | 6 | 158 | 1 | 156 | 7.47e-38 | 139 |
MS.gene040602.t1 | MTR_8g093580 | 42.767 | 159 | 82 | 4 | 6 | 158 | 1 | 156 | 7.32e-37 | 137 |
MS.gene040602.t1 | MTR_4g075980 | 43.373 | 166 | 78 | 5 | 1 | 158 | 4 | 161 | 1.11e-36 | 133 |
MS.gene040602.t1 | MTR_1g097300 | 51.181 | 127 | 58 | 3 | 13 | 135 | 21 | 147 | 2.93e-36 | 137 |
MS.gene040602.t1 | MTR_2g086880 | 42.675 | 157 | 79 | 4 | 2 | 155 | 9 | 157 | 2.99e-36 | 136 |
MS.gene040602.t1 | MTR_2g086880 | 42.675 | 157 | 79 | 4 | 2 | 155 | 9 | 157 | 4.47e-36 | 136 |
MS.gene040602.t1 | MTR_8g023840 | 45.395 | 152 | 69 | 5 | 11 | 155 | 11 | 155 | 9.46e-35 | 130 |
MS.gene040602.t1 | MTR_3g096140 | 45.000 | 140 | 63 | 4 | 28 | 158 | 2 | 136 | 2.26e-33 | 125 |
MS.gene040602.t1 | MTR_3g098810 | 40.491 | 163 | 84 | 6 | 9 | 160 | 12 | 172 | 3.17e-33 | 122 |
MS.gene040602.t1 | MTR_8g099750 | 38.125 | 160 | 89 | 5 | 9 | 160 | 12 | 169 | 7.84e-33 | 121 |
MS.gene040602.t1 | MTR_8g023860 | 43.421 | 152 | 72 | 5 | 11 | 155 | 12 | 156 | 3.82e-32 | 124 |
MS.gene040602.t1 | MTR_8g094580 | 42.038 | 157 | 78 | 5 | 58 | 207 | 2 | 152 | 4.98e-32 | 119 |
MS.gene040602.t1 | MTR_2g086690 | 41.509 | 159 | 76 | 7 | 12 | 156 | 5 | 160 | 6.94e-32 | 119 |
MS.gene040602.t1 | MTR_4g052620 | 38.650 | 163 | 84 | 6 | 7 | 156 | 1 | 160 | 6.10e-31 | 117 |
MS.gene040602.t1 | MTR_3g098810 | 43.182 | 132 | 67 | 4 | 9 | 134 | 12 | 141 | 5.77e-30 | 112 |
MS.gene040602.t1 | MTR_8g023880 | 40.828 | 169 | 68 | 8 | 11 | 158 | 7 | 164 | 8.57e-27 | 106 |
MS.gene040602.t1 | MTR_4g094302 | 34.225 | 187 | 102 | 5 | 1 | 176 | 1 | 177 | 9.65e-27 | 104 |
MS.gene040602.t1 | MTR_8g023930 | 35.955 | 178 | 96 | 7 | 11 | 180 | 24 | 191 | 2.67e-26 | 108 |
MS.gene040602.t1 | MTR_8g023900 | 38.608 | 158 | 80 | 6 | 14 | 161 | 196 | 346 | 3.15e-26 | 108 |
MS.gene040602.t1 | MTR_8g023900 | 36.585 | 164 | 92 | 5 | 2 | 158 | 3 | 161 | 3.31e-26 | 108 |
MS.gene040602.t1 | MTR_7g105170 | 32.370 | 173 | 101 | 5 | 11 | 167 | 4 | 176 | 7.41e-25 | 100 |
MS.gene040602.t1 | MTR_4g094302 | 36.429 | 140 | 73 | 4 | 1 | 134 | 1 | 130 | 1.07e-24 | 97.8 |
MS.gene040602.t1 | MTR_7g070140 | 48.148 | 81 | 40 | 1 | 63 | 141 | 18 | 98 | 1.70e-22 | 91.3 |
MS.gene040602.t1 | MTR_8g093790 | 36.471 | 170 | 81 | 8 | 9 | 175 | 8 | 153 | 1.83e-22 | 92.8 |
MS.gene040602.t1 | MTR_3g096400 | 31.217 | 189 | 101 | 7 | 9 | 178 | 5 | 183 | 3.39e-20 | 87.0 |
MS.gene040602.t1 | MTR_7g070150 | 46.269 | 67 | 32 | 1 | 105 | 171 | 8 | 70 | 3.01e-16 | 73.2 |
MS.gene040602.t1 | MTR_7g083330 | 27.684 | 177 | 122 | 4 | 10 | 182 | 17 | 191 | 1.92e-15 | 73.9 |
MS.gene040602.t1 | MTR_7g083370 | 28.966 | 145 | 87 | 5 | 4 | 139 | 3 | 140 | 7.16e-14 | 68.2 |
MS.gene040602.t1 | MTR_7g083360 | 27.972 | 143 | 97 | 4 | 4 | 142 | 3 | 143 | 2.45e-13 | 67.0 |
MS.gene040602.t1 | MTR_4g088245 | 26.667 | 240 | 128 | 15 | 11 | 226 | 68 | 283 | 3.23e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene040602.t1 | AT1G56010 | 60.559 | 322 | 101 | 10 | 2 | 305 | 10 | 323 | 3.77e-128 | 368 |
MS.gene040602.t1 | AT3G12977 | 54.839 | 310 | 92 | 11 | 3 | 305 | 10 | 278 | 3.00e-104 | 306 |
MS.gene040602.t1 | AT1G56010 | 59.091 | 264 | 83 | 10 | 58 | 305 | 2 | 256 | 1.62e-94 | 280 |
MS.gene040602.t1 | AT3G12977 | 48.571 | 280 | 85 | 11 | 30 | 305 | 1 | 225 | 6.64e-72 | 222 |
MS.gene040602.t1 | AT5G61430 | 51.464 | 239 | 94 | 7 | 11 | 232 | 16 | 249 | 1.51e-69 | 219 |
MS.gene040602.t1 | AT3G18400 | 62.987 | 154 | 53 | 2 | 7 | 158 | 1 | 152 | 2.58e-68 | 216 |
MS.gene040602.t1 | AT5G07680 | 44.850 | 301 | 136 | 8 | 11 | 298 | 3 | 286 | 7.16e-67 | 212 |
MS.gene040602.t1 | AT5G07680 | 44.850 | 301 | 136 | 8 | 11 | 298 | 17 | 300 | 9.43e-67 | 212 |
MS.gene040602.t1 | AT5G18270 | 60.870 | 161 | 59 | 3 | 11 | 167 | 21 | 181 | 3.80e-65 | 208 |
MS.gene040602.t1 | AT5G18270 | 60.870 | 161 | 59 | 3 | 11 | 167 | 21 | 181 | 4.10e-65 | 208 |
MS.gene040602.t1 | AT5G39610 | 51.643 | 213 | 91 | 5 | 4 | 208 | 9 | 217 | 3.69e-64 | 204 |
MS.gene040602.t1 | AT3G04060 | 46.154 | 247 | 117 | 6 | 11 | 243 | 20 | 264 | 1.70e-62 | 201 |
MS.gene040602.t1 | AT1G76420 | 60.000 | 155 | 56 | 3 | 8 | 158 | 19 | 171 | 2.78e-62 | 201 |
MS.gene040602.t1 | AT4G28530 | 56.571 | 175 | 51 | 4 | 7 | 161 | 6 | 175 | 7.22e-62 | 200 |
MS.gene040602.t1 | AT5G53950 | 61.635 | 159 | 56 | 3 | 11 | 164 | 17 | 175 | 4.11e-61 | 199 |
MS.gene040602.t1 | AT3G29035 | 48.908 | 229 | 95 | 8 | 11 | 220 | 24 | 249 | 5.80e-61 | 197 |
MS.gene040602.t1 | AT3G15170 | 48.230 | 226 | 92 | 5 | 8 | 220 | 17 | 230 | 1.74e-60 | 195 |
MS.gene040602.t1 | AT2G24430 | 59.615 | 156 | 55 | 4 | 8 | 158 | 13 | 165 | 4.82e-60 | 194 |
MS.gene040602.t1 | AT2G24430 | 59.615 | 156 | 55 | 4 | 8 | 158 | 13 | 165 | 4.82e-60 | 194 |
MS.gene040602.t1 | AT1G71930 | 53.049 | 164 | 65 | 5 | 1 | 158 | 1 | 158 | 5.96e-57 | 186 |
MS.gene040602.t1 | AT1G71930 | 53.049 | 164 | 65 | 5 | 1 | 158 | 1 | 158 | 5.96e-57 | 186 |
MS.gene040602.t1 | AT1G12260 | 39.262 | 298 | 133 | 11 | 9 | 270 | 5 | 290 | 1.08e-55 | 184 |
MS.gene040602.t1 | AT2G18060 | 46.465 | 198 | 93 | 5 | 6 | 193 | 4 | 198 | 2.18e-55 | 184 |
MS.gene040602.t1 | AT2G18060 | 46.465 | 198 | 93 | 5 | 6 | 193 | 4 | 198 | 2.18e-55 | 184 |
MS.gene040602.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 10 | 159 | 1.98e-54 | 182 |
MS.gene040602.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 10 | 159 | 1.98e-54 | 182 |
MS.gene040602.t1 | AT5G62380 | 56.410 | 156 | 58 | 4 | 9 | 158 | 5 | 156 | 2.18e-54 | 181 |
MS.gene040602.t1 | AT5G62380 | 56.410 | 156 | 58 | 4 | 9 | 158 | 5 | 156 | 2.18e-54 | 181 |
MS.gene040602.t1 | AT4G36160 | 54.248 | 153 | 62 | 3 | 11 | 158 | 14 | 163 | 2.23e-54 | 181 |
MS.gene040602.t1 | AT1G12260 | 50.000 | 180 | 76 | 5 | 9 | 178 | 5 | 180 | 2.72e-54 | 182 |
MS.gene040602.t1 | AT3G04070 | 50.877 | 171 | 71 | 3 | 9 | 166 | 8 | 178 | 3.88e-54 | 180 |
MS.gene040602.t1 | AT1G62700 | 49.735 | 189 | 79 | 6 | 9 | 191 | 5 | 183 | 1.03e-53 | 180 |
MS.gene040602.t1 | AT1G62700 | 49.735 | 189 | 79 | 6 | 9 | 191 | 5 | 183 | 1.03e-53 | 180 |
MS.gene040602.t1 | AT4G10350 | 53.595 | 153 | 65 | 3 | 11 | 158 | 9 | 160 | 1.40e-53 | 178 |
MS.gene040602.t1 | AT3G61910 | 49.704 | 169 | 68 | 4 | 8 | 159 | 8 | 176 | 1.30e-52 | 176 |
MS.gene040602.t1 | AT1G33280 | 51.875 | 160 | 68 | 3 | 4 | 158 | 1 | 156 | 1.96e-52 | 174 |
MS.gene040602.t1 | AT2G46770 | 49.405 | 168 | 68 | 3 | 8 | 158 | 13 | 180 | 2.01e-52 | 176 |
MS.gene040602.t1 | AT4G27410 | 52.532 | 158 | 66 | 3 | 6 | 158 | 9 | 162 | 2.16e-52 | 174 |
MS.gene040602.t1 | AT1G54330 | 56.098 | 164 | 64 | 4 | 6 | 165 | 1 | 160 | 6.37e-52 | 173 |
MS.gene040602.t1 | AT5G66300 | 51.235 | 162 | 68 | 4 | 11 | 165 | 12 | 169 | 7.26e-52 | 172 |
MS.gene040602.t1 | AT3G04070 | 46.524 | 187 | 71 | 3 | 9 | 166 | 8 | 194 | 1.23e-51 | 174 |
MS.gene040602.t1 | AT3G17730 | 52.532 | 158 | 70 | 3 | 6 | 159 | 1 | 157 | 1.19e-50 | 168 |
MS.gene040602.t1 | AT1G79580 | 51.592 | 157 | 66 | 4 | 8 | 158 | 14 | 166 | 2.97e-50 | 171 |
MS.gene040602.t1 | AT1G79580 | 51.592 | 157 | 66 | 4 | 8 | 158 | 14 | 166 | 2.97e-50 | 171 |
MS.gene040602.t1 | AT1G79580 | 51.592 | 157 | 66 | 4 | 8 | 158 | 14 | 166 | 2.97e-50 | 171 |
MS.gene040602.t1 | AT1G79580 | 51.592 | 157 | 66 | 4 | 8 | 158 | 14 | 166 | 2.97e-50 | 171 |
MS.gene040602.t1 | AT1G79580 | 51.592 | 157 | 66 | 4 | 8 | 158 | 14 | 166 | 2.97e-50 | 171 |
MS.gene040602.t1 | AT5G17260 | 51.592 | 157 | 72 | 2 | 6 | 158 | 1 | 157 | 3.79e-50 | 173 |
MS.gene040602.t1 | AT1G32770 | 45.178 | 197 | 91 | 6 | 8 | 187 | 13 | 209 | 1.19e-49 | 169 |
MS.gene040602.t1 | AT5G61430 | 50.000 | 190 | 75 | 6 | 58 | 232 | 2 | 186 | 1.65e-49 | 166 |
MS.gene040602.t1 | AT3G03200 | 48.256 | 172 | 84 | 3 | 6 | 173 | 1 | 171 | 2.28e-49 | 171 |
MS.gene040602.t1 | AT3G15500 | 50.920 | 163 | 74 | 4 | 6 | 165 | 9 | 168 | 2.66e-49 | 167 |
MS.gene040602.t1 | AT1G52890 | 50.920 | 163 | 74 | 4 | 6 | 165 | 9 | 168 | 9.37e-49 | 165 |
MS.gene040602.t1 | AT1G65910 | 52.229 | 157 | 70 | 3 | 6 | 158 | 1 | 156 | 1.22e-48 | 171 |
MS.gene040602.t1 | AT1G01720 | 39.147 | 258 | 124 | 8 | 10 | 243 | 6 | 254 | 1.35e-48 | 164 |
MS.gene040602.t1 | AT1G61110 | 45.405 | 185 | 78 | 6 | 2 | 169 | 7 | 185 | 5.06e-48 | 163 |
MS.gene040602.t1 | AT4G27410 | 46.857 | 175 | 67 | 4 | 6 | 158 | 9 | 179 | 6.80e-48 | 163 |
MS.gene040602.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 6.89e-48 | 167 |
MS.gene040602.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 8.11e-48 | 168 |
MS.gene040602.t1 | AT4G35580 | 51.497 | 167 | 64 | 5 | 1 | 158 | 1 | 159 | 8.15e-48 | 168 |
MS.gene040602.t1 | AT1G69490 | 47.799 | 159 | 72 | 3 | 8 | 158 | 6 | 161 | 1.01e-46 | 158 |
MS.gene040602.t1 | AT5G08790 | 48.408 | 157 | 74 | 3 | 8 | 158 | 4 | 159 | 4.03e-46 | 157 |
MS.gene040602.t1 | AT5G63790 | 48.734 | 158 | 74 | 3 | 7 | 158 | 46 | 202 | 1.13e-45 | 157 |
MS.gene040602.t1 | AT5G63790 | 48.734 | 158 | 74 | 3 | 7 | 158 | 56 | 212 | 1.32e-45 | 157 |
MS.gene040602.t1 | AT1G77450 | 47.468 | 158 | 78 | 3 | 5 | 158 | 4 | 160 | 1.79e-45 | 155 |
MS.gene040602.t1 | AT3G10490 | 41.743 | 218 | 104 | 5 | 7 | 220 | 23 | 221 | 1.97e-45 | 154 |
MS.gene040602.t1 | AT5G39820 | 44.681 | 188 | 80 | 6 | 2 | 165 | 11 | 198 | 2.89e-45 | 157 |
MS.gene040602.t1 | AT3G10480 | 47.027 | 185 | 84 | 5 | 11 | 184 | 27 | 208 | 1.60e-44 | 157 |
MS.gene040602.t1 | AT3G10490 | 51.592 | 157 | 72 | 3 | 7 | 159 | 23 | 179 | 3.71e-44 | 156 |
MS.gene040602.t1 | AT5G46590 | 47.561 | 164 | 80 | 4 | 6 | 164 | 1 | 163 | 4.52e-44 | 152 |
MS.gene040602.t1 | AT2G33480 | 49.673 | 153 | 71 | 4 | 10 | 160 | 14 | 162 | 5.87e-44 | 151 |
MS.gene040602.t1 | AT2G33480 | 50.327 | 153 | 68 | 4 | 10 | 160 | 14 | 160 | 6.47e-44 | 151 |
MS.gene040602.t1 | AT5G13180 | 45.614 | 171 | 73 | 6 | 1 | 160 | 1 | 162 | 1.00e-43 | 150 |
MS.gene040602.t1 | AT2G43000 | 42.703 | 185 | 100 | 3 | 8 | 187 | 16 | 199 | 1.17e-43 | 150 |
MS.gene040602.t1 | AT1G26870 | 43.367 | 196 | 82 | 4 | 7 | 190 | 12 | 190 | 1.78e-43 | 154 |
MS.gene040602.t1 | AT3G10480 | 47.027 | 185 | 83 | 6 | 11 | 184 | 27 | 207 | 2.70e-43 | 154 |
MS.gene040602.t1 | AT1G32510 | 47.368 | 171 | 79 | 3 | 6 | 165 | 1 | 171 | 3.32e-43 | 150 |
MS.gene040602.t1 | AT3G15510 | 47.170 | 159 | 70 | 4 | 15 | 159 | 21 | 179 | 4.20e-43 | 152 |
MS.gene040602.t1 | AT5G04410 | 50.327 | 153 | 71 | 4 | 11 | 159 | 9 | 160 | 4.52e-43 | 155 |
MS.gene040602.t1 | AT1G33060 | 48.408 | 157 | 66 | 5 | 11 | 158 | 24 | 174 | 6.51e-43 | 156 |
MS.gene040602.t1 | AT1G33060 | 48.408 | 157 | 66 | 5 | 11 | 158 | 24 | 174 | 7.22e-43 | 156 |
MS.gene040602.t1 | AT3G10500 | 49.673 | 153 | 72 | 4 | 11 | 159 | 9 | 160 | 7.23e-43 | 155 |
MS.gene040602.t1 | AT4G17980 | 43.979 | 191 | 87 | 6 | 6 | 179 | 1 | 188 | 1.35e-42 | 147 |
MS.gene040602.t1 | AT4G17980 | 43.979 | 191 | 87 | 6 | 6 | 179 | 1 | 188 | 1.58e-42 | 148 |
MS.gene040602.t1 | AT5G46590 | 50.746 | 134 | 61 | 3 | 6 | 134 | 1 | 134 | 2.04e-41 | 145 |
MS.gene040602.t1 | AT1G52880 | 46.108 | 167 | 71 | 4 | 15 | 165 | 21 | 184 | 5.94e-41 | 145 |
MS.gene040602.t1 | AT2G02450 | 48.993 | 149 | 70 | 4 | 13 | 158 | 53 | 198 | 6.04e-41 | 146 |
MS.gene040602.t1 | AT2G02450 | 49.660 | 147 | 68 | 4 | 13 | 156 | 53 | 196 | 6.96e-41 | 147 |
MS.gene040602.t1 | AT3G10480 | 41.284 | 218 | 81 | 6 | 11 | 184 | 27 | 241 | 1.16e-40 | 148 |
MS.gene040602.t1 | AT5G24590 | 43.684 | 190 | 88 | 7 | 9 | 186 | 11 | 193 | 6.19e-40 | 145 |
MS.gene040602.t1 | AT2G17040 | 45.695 | 151 | 71 | 3 | 13 | 158 | 8 | 152 | 9.42e-38 | 135 |
MS.gene040602.t1 | AT4G28530 | 42.197 | 173 | 42 | 4 | 7 | 161 | 6 | 138 | 4.29e-37 | 134 |
MS.gene040602.t1 | AT3G12910 | 44.444 | 162 | 71 | 5 | 13 | 156 | 23 | 183 | 6.77e-37 | 134 |
MS.gene040602.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.18e-36 | 137 |
MS.gene040602.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.18e-36 | 137 |
MS.gene040602.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.18e-36 | 137 |
MS.gene040602.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.18e-36 | 137 |
MS.gene040602.t1 | AT5G09330 | 41.139 | 158 | 88 | 3 | 6 | 159 | 1 | 157 | 1.18e-36 | 137 |
MS.gene040602.t1 | AT3G49530 | 43.312 | 157 | 83 | 5 | 11 | 162 | 13 | 168 | 1.34e-36 | 135 |
MS.gene040602.t1 | AT2G27300 | 40.000 | 180 | 93 | 6 | 2 | 175 | 5 | 175 | 1.84e-36 | 133 |
MS.gene040602.t1 | AT1G34180 | 44.079 | 152 | 76 | 4 | 13 | 158 | 18 | 166 | 3.77e-36 | 135 |
MS.gene040602.t1 | AT3G49530 | 43.312 | 157 | 83 | 5 | 11 | 162 | 13 | 168 | 3.85e-36 | 135 |
MS.gene040602.t1 | AT1G34180 | 43.791 | 153 | 77 | 4 | 13 | 159 | 18 | 167 | 1.44e-35 | 135 |
MS.gene040602.t1 | AT4G10350 | 57.895 | 95 | 39 | 1 | 64 | 158 | 20 | 113 | 4.86e-35 | 129 |
MS.gene040602.t1 | AT1G34190 | 44.079 | 152 | 78 | 4 | 13 | 159 | 18 | 167 | 8.50e-35 | 132 |
MS.gene040602.t1 | AT5G64060 | 40.506 | 158 | 89 | 3 | 6 | 159 | 1 | 157 | 1.25e-34 | 129 |
MS.gene040602.t1 | AT1G34180 | 41.463 | 164 | 75 | 5 | 13 | 158 | 18 | 178 | 3.35e-34 | 130 |
MS.gene040602.t1 | AT1G34180 | 41.212 | 165 | 76 | 5 | 13 | 159 | 18 | 179 | 9.70e-34 | 130 |
MS.gene040602.t1 | AT5G22290 | 39.375 | 160 | 86 | 4 | 5 | 161 | 15 | 166 | 3.05e-33 | 125 |
MS.gene040602.t1 | AT3G44290 | 41.096 | 146 | 75 | 3 | 13 | 155 | 16 | 153 | 2.06e-32 | 120 |
MS.gene040602.t1 | AT3G44290 | 41.096 | 146 | 75 | 3 | 13 | 155 | 16 | 153 | 1.45e-31 | 120 |
MS.gene040602.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 2 | 171 | 5.81e-31 | 122 |
MS.gene040602.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 2 | 171 | 5.96e-31 | 122 |
MS.gene040602.t1 | AT1G32870 | 41.143 | 175 | 94 | 4 | 3 | 173 | 38 | 207 | 1.05e-30 | 121 |
MS.gene040602.t1 | AT5G04395 | 41.216 | 148 | 69 | 3 | 5 | 134 | 22 | 169 | 1.86e-29 | 111 |
MS.gene040602.t1 | AT2G33480 | 51.546 | 97 | 46 | 1 | 64 | 160 | 10 | 105 | 1.43e-28 | 109 |
MS.gene040602.t1 | AT1G02230 | 31.064 | 235 | 143 | 6 | 12 | 237 | 4 | 228 | 2.56e-27 | 109 |
MS.gene040602.t1 | AT5G22380 | 37.908 | 153 | 85 | 6 | 14 | 156 | 8 | 160 | 3.60e-25 | 101 |
MS.gene040602.t1 | AT3G04420 | 32.474 | 194 | 115 | 6 | 12 | 197 | 4 | 189 | 9.27e-25 | 101 |
MS.gene040602.t1 | AT3G44350 | 34.177 | 158 | 96 | 4 | 10 | 159 | 4 | 161 | 1.25e-24 | 100 |
MS.gene040602.t1 | AT2G18060 | 43.750 | 112 | 55 | 3 | 87 | 193 | 2 | 110 | 1.85e-24 | 100 |
MS.gene040602.t1 | AT3G04420 | 30.000 | 240 | 137 | 9 | 12 | 233 | 4 | 230 | 2.37e-24 | 101 |
MS.gene040602.t1 | AT4G01520 | 33.714 | 175 | 96 | 7 | 10 | 171 | 3 | 170 | 3.73e-23 | 97.4 |
MS.gene040602.t1 | AT4G01550 | 36.306 | 157 | 84 | 7 | 14 | 161 | 7 | 156 | 4.59e-23 | 99.0 |
MS.gene040602.t1 | AT5G64530 | 34.104 | 173 | 71 | 7 | 11 | 159 | 3 | 156 | 1.17e-22 | 93.2 |
MS.gene040602.t1 | AT5G64530 | 38.462 | 130 | 60 | 5 | 11 | 134 | 3 | 118 | 1.30e-22 | 92.4 |
MS.gene040602.t1 | AT3G10490 | 56.410 | 78 | 34 | 0 | 82 | 159 | 2 | 79 | 1.65e-22 | 96.3 |
MS.gene040602.t1 | AT3G10490 | 56.410 | 78 | 34 | 0 | 82 | 159 | 2 | 79 | 1.65e-22 | 96.3 |
MS.gene040602.t1 | AT3G44350 | 37.879 | 132 | 74 | 4 | 10 | 133 | 4 | 135 | 3.17e-22 | 91.3 |
MS.gene040602.t1 | AT4G01540 | 32.558 | 172 | 94 | 7 | 14 | 171 | 7 | 170 | 4.85e-22 | 95.5 |
MS.gene040602.t1 | AT4G01540 | 32.558 | 172 | 94 | 7 | 14 | 171 | 7 | 170 | 1.02e-21 | 95.1 |
MS.gene040602.t1 | AT2G43000 | 39.167 | 120 | 70 | 1 | 71 | 187 | 2 | 121 | 1.06e-21 | 90.9 |
MS.gene040602.t1 | AT4G01540 | 32.558 | 172 | 94 | 7 | 14 | 171 | 7 | 170 | 1.07e-21 | 94.7 |
MS.gene040602.t1 | AT4G01540 | 32.558 | 172 | 94 | 7 | 14 | 171 | 7 | 170 | 1.20e-21 | 95.1 |
MS.gene040602.t1 | AT1G02250 | 32.394 | 213 | 118 | 10 | 12 | 210 | 4 | 204 | 2.36e-20 | 90.5 |
MS.gene040602.t1 | AT1G02220 | 33.987 | 153 | 84 | 6 | 12 | 157 | 4 | 146 | 7.60e-20 | 89.4 |
MS.gene040602.t1 | AT5G50820 | 36.296 | 135 | 74 | 4 | 10 | 139 | 16 | 143 | 2.04e-18 | 82.0 |
MS.gene040602.t1 | AT1G01010 | 31.447 | 159 | 87 | 6 | 14 | 158 | 6 | 156 | 1.73e-16 | 79.7 |
MS.gene040602.t1 | AT5G14000 | 33.588 | 131 | 81 | 3 | 10 | 136 | 14 | 142 | 2.16e-15 | 72.8 |
MS.gene040602.t1 | AT3G56530 | 27.215 | 158 | 105 | 4 | 5 | 156 | 46 | 199 | 7.99e-15 | 74.3 |
MS.gene040602.t1 | AT3G55210 | 27.746 | 173 | 102 | 5 | 1 | 156 | 1 | 167 | 1.86e-14 | 72.8 |
MS.gene040602.t1 | AT5G14000 | 31.788 | 151 | 93 | 5 | 10 | 156 | 14 | 158 | 2.08e-14 | 71.2 |
MS.gene040602.t1 | AT5G22290 | 44.595 | 74 | 33 | 2 | 88 | 161 | 2 | 67 | 2.21e-14 | 71.6 |
MS.gene040602.t1 | AT3G04430 | 30.534 | 131 | 77 | 3 | 17 | 133 | 6 | 136 | 3.76e-12 | 64.7 |
MS.gene040602.t1 | AT1G28470 | 30.000 | 180 | 95 | 9 | 11 | 171 | 77 | 244 | 7.93e-11 | 62.4 |
Find 76 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATCACTTCCAGCATTAA+TGG | 0.146600 | 2.1:-28777981 | MS.gene040602:CDS |
ATTAATGATCAAAACCTAAA+AGG | 0.212913 | 2.1:-28777695 | MS.gene040602:CDS |
TCCTAAAATTTCATCTTCTA+AGG | 0.243571 | 2.1:-28779273 | MS.gene040602:intron |
GTTCCATATTGGTTGTTATA+TGG | 0.295352 | 2.1:+28777855 | None:intergenic |
TTGTTGGCTAGAGGTAATTT+TGG | 0.309334 | 2.1:+28777833 | None:intergenic |
CAACCATATAACAACCAATA+TGG | 0.320797 | 2.1:-28777858 | MS.gene040602:CDS |
GTAGCCCTGTTGCATATTTA+CGG | 0.328714 | 2.1:+28779477 | None:intergenic |
ACTTGCATTGTTGTTATTGT+TGG | 0.333988 | 2.1:+28777817 | None:intergenic |
AACAACAATGCAAGTACATT+TGG | 0.349859 | 2.1:-28777809 | MS.gene040602:CDS |
CTTCGTAAGGGCACTCTTGT+TGG | 0.373702 | 2.1:-28779395 | MS.gene040602:CDS |
GATAAAGGGTCTAAGCTATA+AGG | 0.378533 | 2.1:+28777779 | None:intergenic |
GTGCAACTGCATCAGGCTAT+TGG | 0.395249 | 2.1:-28779445 | MS.gene040602:CDS |
GGTTGTAGATTGGGTTGGTT+TGG | 0.395494 | 2.1:+28777876 | None:intergenic |
TTGTTATATGGTTGTAGATT+GGG | 0.402170 | 2.1:+28777867 | None:intergenic |
GTTGTTATATGGTTGTAGAT+TGG | 0.403136 | 2.1:+28777866 | None:intergenic |
TTGTGTATATCCAGGAAGAT+TGG | 0.408241 | 2.1:-28778087 | MS.gene040602:intron |
AGAGACCGTAAATATGCAAC+AGG | 0.409929 | 2.1:-28779482 | MS.gene040602:CDS |
TGTGTATATCCAGGAAGATT+GGG | 0.427064 | 2.1:-28778086 | MS.gene040602:intron |
TGTGAGCCATGGGATATTCC+TGG | 0.431452 | 2.1:-28782611 | MS.gene040602:intron |
TTTGAGTCAACTATCAAAGA+TGG | 0.431620 | 2.1:-28777729 | MS.gene040602:CDS |
TTGAGAAAACATGGAGAAGC+AGG | 0.435570 | 2.1:+28777901 | None:intergenic |
TTAATGATCAAAACCTAAAA+GGG | 0.436538 | 2.1:-28777694 | MS.gene040602:CDS |
CCCATGGCTCACACTTGTTA+AGG | 0.440925 | 2.1:+28782621 | None:intergenic |
CTTGCTCATATTCATCTGTA+TGG | 0.443475 | 2.1:+28777927 | None:intergenic |
ACAAATCGTGCAACTGCATC+AGG | 0.456004 | 2.1:-28779452 | MS.gene040602:CDS |
ATGCATGAGTTTCGTATTGA+GGG | 0.458720 | 2.1:-28779308 | MS.gene040602:CDS |
TCAGGCTATTGGAAGGCAAC+AGG | 0.459258 | 2.1:-28779434 | MS.gene040602:CDS |
ATCAAGGAAGGGCACCTAAA+GGG | 0.466310 | 2.1:-28779349 | MS.gene040602:CDS |
AAGACTTTAGTGTTCTATCA+AGG | 0.477018 | 2.1:-28779365 | MS.gene040602:CDS |
TATGCATGAGTTTCGTATTG+AGG | 0.481434 | 2.1:-28779309 | MS.gene040602:CDS |
GTCAACATCAATCATGAGAA+AGG | 0.483380 | 2.1:+28782643 | None:intergenic |
TTTCGTATTGAGGGTTCTCA+TGG | 0.486000 | 2.1:-28779299 | MS.gene040602:CDS |
TGCTACAAAACCTCCAAGCA+TGG | 0.497760 | 2.1:-28778029 | MS.gene040602:CDS |
TGAGAGTTACTTATCTGAAG+TGG | 0.505837 | 2.1:-28777642 | MS.gene040602:CDS |
CATCTGTATGGAATTGAGCT+TGG | 0.508894 | 2.1:+28777939 | None:intergenic |
AAAGGGTCATCACCAAGCTT+AGG | 0.523339 | 2.1:-28777677 | MS.gene040602:CDS |
CTTTAGTGTTCTATCAAGGA+AGG | 0.528388 | 2.1:-28779361 | MS.gene040602:CDS |
AACAATGCAAGTACATTTGG+AGG | 0.528454 | 2.1:-28777806 | MS.gene040602:CDS |
GGACAGAGCTATCCTTCGTA+AGG | 0.530042 | 2.1:-28779408 | MS.gene040602:CDS |
ATGTAAGAATCCATTAATGC+TGG | 0.533005 | 2.1:+28777971 | None:intergenic |
TCATAGCAACTACCCATGCT+TGG | 0.533828 | 2.1:+28778016 | None:intergenic |
TATCAAGGAAGGGCACCTAA+AGG | 0.534747 | 2.1:-28779350 | MS.gene040602:CDS |
GAACTTCCTTCACCTAAGCT+TGG | 0.537127 | 2.1:+28777665 | None:intergenic |
CCTTAACAAGTGTGAGCCAT+GGG | 0.539747 | 2.1:-28782621 | MS.gene040602:CDS |
CACACAAGCTCTTCATCTCT+AGG | 0.541777 | 2.1:+28782701 | None:intergenic |
TAGCAACTACCCATGCTTGG+AGG | 0.547765 | 2.1:+28778019 | None:intergenic |
GAGAGTTACTTATCTGAAGT+GGG | 0.548125 | 2.1:-28777641 | MS.gene040602:CDS |
TATATGGTTGTAGATTGGGT+TGG | 0.552281 | 2.1:+28777871 | None:intergenic |
GAGTAACATAAGCATGGTTG+AGG | 0.554745 | 2.1:-28782753 | MS.gene040602:CDS |
TTAGAAATTGTTCCACATGT+GGG | 0.570954 | 2.1:+28777613 | None:intergenic |
TAGAAATTGTTCCACATGTG+GGG | 0.571008 | 2.1:+28777614 | None:intergenic |
ATTAGAAATTGTTCCACATG+TGG | 0.572291 | 2.1:+28777612 | None:intergenic |
ACCTTAACAAGTGTGAGCCA+TGG | 0.592225 | 2.1:-28782622 | MS.gene040602:CDS |
GCTACAAAACCTCCAAGCAT+GGG | 0.600781 | 2.1:-28778028 | MS.gene040602:CDS |
GTTGAGGCAAAGCTACCACC+AGG | 0.601916 | 2.1:-28782737 | MS.gene040602:CDS |
GTGTGATTACTTGATGAAGA+AGG | 0.603211 | 2.1:-28782681 | MS.gene040602:CDS |
CATGTGTGGGAGGGAAAGAG+TGG | 0.608228 | 2.1:-28779520 | MS.gene040602:CDS |
CAGAAGCAGCATGTGTGGGA+GGG | 0.608897 | 2.1:-28779529 | MS.gene040602:CDS |
TTTAGTGTTCTATCAAGGAA+GGG | 0.615096 | 2.1:-28779360 | MS.gene040602:CDS |
CTATTGGAAGGCAACAGGAA+AGG | 0.619038 | 2.1:-28779429 | MS.gene040602:CDS |
TACTAACCAGGAATATCCCA+TGG | 0.624451 | 2.1:+28782605 | None:intergenic |
TCATCACCAAGCTTAGGTGA+AGG | 0.632923 | 2.1:-28777671 | MS.gene040602:CDS |
GACAGAGCTATCCTTCGTAA+GGG | 0.632999 | 2.1:-28779407 | MS.gene040602:CDS |
AACTGCATCAGGCTATTGGA+AGG | 0.636475 | 2.1:-28779441 | MS.gene040602:CDS |
TTGTTGTTATTGTTGGCTAG+AGG | 0.638919 | 2.1:+28777824 | None:intergenic |
TGAGAAAACATGGAGAAGCA+GGG | 0.639023 | 2.1:+28777902 | None:intergenic |
TGGTGCAGAAGCAGCATGTG+TGG | 0.642823 | 2.1:-28779534 | MS.gene040602:intron |
GCAGAAGCAGCATGTGTGGG+AGG | 0.644425 | 2.1:-28779530 | MS.gene040602:intron |
CTAGGATGAAATCTGAACCC+TGG | 0.649291 | 2.1:+28782719 | None:intergenic |
CAACAAGAGTGCCCTTACGA+AGG | 0.654867 | 2.1:+28779396 | None:intergenic |
GGTAGTTGCTATGATGACAC+AGG | 0.669164 | 2.1:-28778007 | MS.gene040602:CDS |
AAGTGGGTATGCCCCACATG+TGG | 0.670092 | 2.1:-28777625 | MS.gene040602:CDS |
GGTGCAGAAGCAGCATGTGT+GGG | 0.686440 | 2.1:-28779533 | MS.gene040602:intron |
GGATGAAATCTGAACCCTGG+TGG | 0.692300 | 2.1:+28782722 | None:intergenic |
GAGACCGTAAATATGCAACA+GGG | 0.752701 | 2.1:-28779481 | MS.gene040602:CDS |
TTGAGGCAAAGCTACCACCA+GGG | 0.776299 | 2.1:-28782736 | MS.gene040602:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATAAATAAAAAATAT+TGG | - | chr2.1:28778794-28778813 | MS.gene040602:intron | 0.0% |
!! | GATAAAAAAAATTATATCAT+CGG | + | chr2.1:28779522-28779541 | None:intergenic | 10.0% |
!! | TTTACACTAATTAATTATAT+TGG | - | chr2.1:28781314-28781333 | MS.gene040602:intron | 10.0% |
!!! | AAATAATTTTTCGTTTATAA+TGG | + | chr2.1:28780488-28780507 | None:intergenic | 10.0% |
!!! | ATTTTTTTTTATATCAACAA+GGG | - | chr2.1:28779809-28779828 | MS.gene040602:intron | 10.0% |
!!! | CTTTAAAAAAAAAAAAACTA+AGG | - | chr2.1:28779482-28779501 | MS.gene040602:CDS | 10.0% |
!!! | TCTTTATTAAATTTTGATAA+GGG | - | chr2.1:28778097-28778116 | MS.gene040602:intron | 10.0% |
!!! | TGTATTATTTTATATCTTTA+AGG | - | chr2.1:28779694-28779713 | MS.gene040602:intron | 10.0% |
!!! | TTCTTTATTAAATTTTGATA+AGG | - | chr2.1:28778096-28778115 | MS.gene040602:intron | 10.0% |
!!! | TTGTGTTTAAAATATTTATA+AGG | - | chr2.1:28781692-28781711 | MS.gene040602:intron | 10.0% |
!!! | TTTTATATGAATTATATTGT+GGG | + | chr2.1:28780441-28780460 | None:intergenic | 10.0% |
!!! | TTTTTATATGAATTATATTG+TGG | + | chr2.1:28780442-28780461 | None:intergenic | 10.0% |
!! | AAAGACAGAAAAAATAAATT+TGG | - | chr2.1:28778507-28778526 | MS.gene040602:intron | 15.0% |
!! | AAATGAATAAGTGTTATAAT+AGG | + | chr2.1:28782173-28782192 | None:intergenic | 15.0% |
!! | AAGATATAAAATAATACAAG+TGG | + | chr2.1:28779692-28779711 | None:intergenic | 15.0% |
!! | ACCATATATGTTAAATTAAA+TGG | - | chr2.1:28781836-28781855 | MS.gene040602:intron | 15.0% |
!! | AGATTGACAAATAAAAATTA+AGG | - | chr2.1:28781426-28781445 | MS.gene040602:intron | 15.0% |
!! | AGTTATTATAGATCAATAAA+AGG | + | chr2.1:28780307-28780326 | None:intergenic | 15.0% |
!! | ATTAATTAGTGTAAAGAAAA+TGG | + | chr2.1:28781309-28781328 | None:intergenic | 15.0% |
!! | CAACAAATAATTATGTTAAA+AGG | + | chr2.1:28780696-28780715 | None:intergenic | 15.0% |
!! | TACATACATAAATATGTAAA+TGG | - | chr2.1:28779595-28779614 | MS.gene040602:intron | 15.0% |
!! | TTTGTCAATTTAAATAGTTA+TGG | - | chr2.1:28779786-28779805 | MS.gene040602:intron | 15.0% |
!!! | AAATTTTCTCATAAAGAAAT+AGG | - | chr2.1:28777891-28777910 | MS.gene040602:CDS | 15.0% |
!!! | ACCATTTAATTTAACATATA+TGG | + | chr2.1:28781840-28781859 | None:intergenic | 15.0% |
!!! | ATTAATGTAATGGAAATATA+TGG | - | chr2.1:28780814-28780833 | MS.gene040602:intron | 15.0% |
!!! | GATTTTTTTTTATATCAACA+AGG | - | chr2.1:28779808-28779827 | MS.gene040602:intron | 15.0% |
!!! | GTTAATTTAATTTCCAATTA+AGG | - | chr2.1:28778250-28778269 | MS.gene040602:intron | 15.0% |
!! | AAATGAAAAAGAAACTGTTA+GGG | - | chr2.1:28779989-28780008 | MS.gene040602:intron | 20.0% |
!! | ACTATCAAAGTCTTTATAAT+AGG | + | chr2.1:28779109-28779128 | None:intergenic | 20.0% |
!! | AGAAAAATACTATTTGTATG+AGG | + | chr2.1:28780752-28780771 | None:intergenic | 20.0% |
!! | AGTATATATCAGTTTCTATT+AGG | + | chr2.1:28778424-28778443 | None:intergenic | 20.0% |
!! | ATAAAATAAGATACATCTTC+AGG | + | chr2.1:28780611-28780630 | None:intergenic | 20.0% |
!! | ATAAAATCCAAAACTAGTTA+TGG | + | chr2.1:28779952-28779971 | None:intergenic | 20.0% |
!! | ATAATTAAACTACAAACACA+TGG | + | chr2.1:28779893-28779912 | None:intergenic | 20.0% |
!! | ATACTTAGGATAAAATACAT+TGG | - | chr2.1:28778832-28778851 | MS.gene040602:intron | 20.0% |
!! | ATGTGACTTCAAAAATATAT+TGG | - | chr2.1:28781520-28781539 | MS.gene040602:intron | 20.0% |
!! | ATTAATGATCAAAACCTAAA+AGG | - | chr2.1:28782673-28782692 | MS.gene040602:CDS | 20.0% |
!! | CTTTCTAAACACAAATATAA+TGG | + | chr2.1:28779403-28779422 | None:intergenic | 20.0% |
!! | GTTTAATAAAAAATTCAGAG+AGG | + | chr2.1:28781565-28781584 | None:intergenic | 20.0% |
!! | TATTGAATAACTGATGTATT+AGG | + | chr2.1:28780554-28780573 | None:intergenic | 20.0% |
!! | TCTTAGTCTAATTAATGTAA+TGG | - | chr2.1:28780804-28780823 | MS.gene040602:intron | 20.0% |
!! | TGGAAAATAAATATGTCAAA+TGG | + | chr2.1:28780403-28780422 | None:intergenic | 20.0% |
!! | TGTGACTTCAAAAATATATT+GGG | - | chr2.1:28781521-28781540 | MS.gene040602:intron | 20.0% |
!! | TGTTCTAATAATTAAGACAA+AGG | - | chr2.1:28780160-28780179 | MS.gene040602:intron | 20.0% |
!! | TTAATGATCAAAACCTAAAA+GGG | - | chr2.1:28782674-28782693 | MS.gene040602:CDS | 20.0% |
!! | TTATCCAATCAAATATCAAA+AGG | + | chr2.1:28781650-28781669 | None:intergenic | 20.0% |
!! | TTCGTTAATTGTTAACTATT+CGG | + | chr2.1:28781937-28781956 | None:intergenic | 20.0% |
!!! | AAGAGTAAAAAAATTTTTGC+TGG | + | chr2.1:28779720-28779739 | None:intergenic | 20.0% |
!!! | AATAGTTGGCAAATTTTAAT+TGG | + | chr2.1:28782105-28782124 | None:intergenic | 20.0% |
!!! | AGAATTTTTCAAGAAATAGT+TGG | + | chr2.1:28782119-28782138 | None:intergenic | 20.0% |
!!! | ATTTAATTTCCAATTAAGGT+AGG | - | chr2.1:28778254-28778273 | MS.gene040602:intron | 20.0% |
!!! | TATTTCTTTCTCCTTTAAAA+AGG | + | chr2.1:28781203-28781222 | None:intergenic | 20.0% |
!!! | TCATTTTGCAACATATTTTT+TGG | - | chr2.1:28781356-28781375 | MS.gene040602:intron | 20.0% |
!!! | TTAGGTTTTGATCATTAATA+GGG | + | chr2.1:28782672-28782691 | None:intergenic | 20.0% |
!!! | TTTAATTTGTATGCACAAAT+AGG | + | chr2.1:28779656-28779675 | None:intergenic | 20.0% |
!!! | TTTAGGTTTTGATCATTAAT+AGG | + | chr2.1:28782673-28782692 | None:intergenic | 20.0% |
! | AAATATGTCAAATGGAACAT+GGG | + | chr2.1:28780395-28780414 | None:intergenic | 25.0% |
! | AACATGTCATGTGTATATAA+AGG | + | chr2.1:28777835-28777854 | None:intergenic | 25.0% |
! | AATAACATCAAGAATTCTTC+AGG | - | chr2.1:28781994-28782013 | MS.gene040602:intron | 25.0% |
! | AATGAAAAAGAAACTGTTAG+GGG | - | chr2.1:28779990-28780009 | MS.gene040602:intron | 25.0% |
! | ACTCATTTGTACTTTATCAA+TGG | + | chr2.1:28777986-28778005 | None:intergenic | 25.0% |
! | ATAGCAAACTGAAAAATTGA+TGG | + | chr2.1:28777961-28777980 | None:intergenic | 25.0% |
! | ATATTGTTAATGAGGACAAT+TGG | - | chr2.1:28780232-28780251 | MS.gene040602:intron | 25.0% |
! | ATGCCATACATTAAAATACA+AGG | + | chr2.1:28778701-28778720 | None:intergenic | 25.0% |
! | ATGTGAATTTAAGTAAGATG+AGG | + | chr2.1:28780339-28780358 | None:intergenic | 25.0% |
! | CATATATAATAGAGATAGGT+AGG | - | chr2.1:28778747-28778766 | MS.gene040602:intron | 25.0% |
! | GAAATGAAAAAGAAACTGTT+AGG | - | chr2.1:28779988-28780007 | MS.gene040602:intron | 25.0% |
! | GACAAAAATCATCTCAAATT+TGG | + | chr2.1:28778536-28778555 | None:intergenic | 25.0% |
! | GTTAAATTGGTTGGAAAATT+CGG | + | chr2.1:28781869-28781888 | None:intergenic | 25.0% |
! | GTTATTCAATCAAAATCGAT+CGG | - | chr2.1:28781731-28781750 | MS.gene040602:intron | 25.0% |
! | GTTTGAACTTAGAGTTAAAT+TGG | + | chr2.1:28781882-28781901 | None:intergenic | 25.0% |
! | TAAATATGTCAAATGGAACA+TGG | + | chr2.1:28780396-28780415 | None:intergenic | 25.0% |
! | TATCTCTATTATATATGCCT+GGG | + | chr2.1:28778744-28778763 | None:intergenic | 25.0% |
! | TATTATTAATTCCTAATCCC+AGG | - | chr2.1:28778724-28778743 | MS.gene040602:intron | 25.0% |
! | TCAGGATAATATTGTTAATG+AGG | - | chr2.1:28780224-28780243 | MS.gene040602:intron | 25.0% |
! | TCCTAAAATTTCATCTTCTA+AGG | - | chr2.1:28781095-28781114 | MS.gene040602:intron | 25.0% |
! | TGATATTTGATTGGATAACT+CGG | - | chr2.1:28781652-28781671 | MS.gene040602:intron | 25.0% |
! | TGCATACAAATTAAATCCAA+TGG | - | chr2.1:28779661-28779680 | MS.gene040602:intron | 25.0% |
! | TTAATTGTTAACTATTCGGA+GGG | + | chr2.1:28781933-28781952 | None:intergenic | 25.0% |
! | TTGTTATATGGTTGTAGATT+GGG | + | chr2.1:28782504-28782523 | None:intergenic | 25.0% |
! | TTTGGACAAAAATGACTATA+GGG | - | chr2.1:28781272-28781291 | MS.gene040602:intron | 25.0% |
!! | AAGACCTTTTGATATTTGAT+TGG | - | chr2.1:28781643-28781662 | MS.gene040602:intron | 25.0% |
!! | ACCTTAGAAGATGAAATTTT+AGG | + | chr2.1:28781099-28781118 | None:intergenic | 25.0% |
!! | ACTTTTCTATCACATGATAA+AGG | + | chr2.1:28782607-28782626 | None:intergenic | 25.0% |
!! | CTTTTCTATCACATGATAAA+GGG | + | chr2.1:28782606-28782625 | None:intergenic | 25.0% |
!! | TACTGAAGCTTTTATAAAGT+AGG | - | chr2.1:28779867-28779886 | MS.gene040602:intron | 25.0% |
!! | TTAGAAGATGAAATTTTAGG+AGG | + | chr2.1:28781096-28781115 | None:intergenic | 25.0% |
!! | TTTTGGACAAAAATGACTAT+AGG | - | chr2.1:28781271-28781290 | MS.gene040602:intron | 25.0% |
!!! | AAGCCTTGTATTTTAATGTA+TGG | - | chr2.1:28778695-28778714 | MS.gene040602:intron | 25.0% |
!!! | AATTTTGTTTGTGTCAAAAC+AGG | + | chr2.1:28780135-28780154 | None:intergenic | 25.0% |
!!! | ATTAAGGACTTTTGACTTTT+TGG | - | chr2.1:28781442-28781461 | MS.gene040602:intron | 25.0% |
!!! | ATTTTGTTTGTGTCAAAACA+GGG | + | chr2.1:28780134-28780153 | None:intergenic | 25.0% |
!!! | CCAATCTACATTTTTTATGT+GGG | - | chr2.1:28778658-28778677 | MS.gene040602:intron | 25.0% |
!!! | CTGTTATTTGTTTTGTAGAT+AGG | + | chr2.1:28781620-28781639 | None:intergenic | 25.0% |
!!! | TAGAAGATGAAATTTTAGGA+GGG | + | chr2.1:28781095-28781114 | None:intergenic | 25.0% |
!!! | TCCAATCTACATTTTTTATG+TGG | - | chr2.1:28778657-28778676 | MS.gene040602:intron | 25.0% |
!!! | TCGATCTAATTTTTTCACAA+AGG | + | chr2.1:28778624-28778643 | None:intergenic | 25.0% |
!!! | TTGTATTTTAATGTATGGCA+TGG | - | chr2.1:28778700-28778719 | MS.gene040602:intron | 25.0% |
!!! | TTTTTTAGGCTTGATATGAT+AGG | - | chr2.1:28779840-28779859 | MS.gene040602:intron | 25.0% |
AAAGGAGAAAGAAATAAGTC+AGG | - | chr2.1:28781207-28781226 | MS.gene040602:intron | 30.0% | |
AACAACAATGCAAGTACATT+TGG | - | chr2.1:28782559-28782578 | MS.gene040602:intron | 30.0% | |
AAGACTTTAGTGTTCTATCA+AGG | - | chr2.1:28781003-28781022 | MS.gene040602:intron | 30.0% | |
AGATTATAGCCTACCTTAAT+TGG | + | chr2.1:28778266-28778285 | None:intergenic | 30.0% | |
AGTTAATCACGTTTATGTGT+AGG | + | chr2.1:28779180-28779199 | None:intergenic | 30.0% | |
ATGAATTATATTGTGGGAGA+GGG | + | chr2.1:28780435-28780454 | None:intergenic | 30.0% | |
ATGGAAGAGGATATGTATAT+TGG | - | chr2.1:28780043-28780062 | MS.gene040602:intron | 30.0% | |
ATGTAAGAATCCATTAATGC+TGG | + | chr2.1:28782400-28782419 | None:intergenic | 30.0% | |
CAAAACAAGTGTCATAGTTT+AGG | + | chr2.1:28782229-28782248 | None:intergenic | 30.0% | |
CAAAAGGATTAAGTAAACTC+AGG | - | chr2.1:28780206-28780225 | MS.gene040602:intron | 30.0% | |
CAACCATATAACAACCAATA+TGG | - | chr2.1:28782510-28782529 | MS.gene040602:intron | 30.0% | |
CAGGCATATATAATAGAGAT+AGG | - | chr2.1:28778743-28778762 | MS.gene040602:intron | 30.0% | |
CCCACATAAAAAATGTAGAT+TGG | + | chr2.1:28778661-28778680 | None:intergenic | 30.0% | |
CTATCTCTATTATATATGCC+TGG | + | chr2.1:28778745-28778764 | None:intergenic | 30.0% | |
CTTACACTGCATATTCATTT+AGG | + | chr2.1:28778461-28778480 | None:intergenic | 30.0% | |
GAACTTAGAGTTAAATTGGT+TGG | + | chr2.1:28781878-28781897 | None:intergenic | 30.0% | |
GTCATGAGCATTTAATCAAA+AGG | - | chr2.1:28780190-28780209 | MS.gene040602:intron | 30.0% | |
GTTAATTGTTAACTATTCGG+AGG | + | chr2.1:28781934-28781953 | None:intergenic | 30.0% | |
GTTCAAGGATCAAAAGATTA+TGG | + | chr2.1:28778346-28778365 | None:intergenic | 30.0% | |
GTTGTTATATGGTTGTAGAT+TGG | + | chr2.1:28782505-28782524 | None:intergenic | 30.0% | |
TAAAGGGAGAAAAACTGAAT+GGG | - | chr2.1:28781035-28781054 | MS.gene040602:intron | 30.0% | |
TAGCTACGAAAATTTAGAGA+CGG | + | chr2.1:28778564-28778583 | None:intergenic | 30.0% | |
TATGAATTATATTGTGGGAG+AGG | + | chr2.1:28780436-28780455 | None:intergenic | 30.0% | |
TATTATATATGCCTGGGATT+AGG | + | chr2.1:28778738-28778757 | None:intergenic | 30.0% | |
TGGAAGAGGATATGTATATT+GGG | - | chr2.1:28780044-28780063 | MS.gene040602:intron | 30.0% | |
TGTTGAGATGTCTTCTAATT+TGG | + | chr2.1:28780019-28780038 | None:intergenic | 30.0% | |
TTAGAAATTGTTCCACATGT+GGG | + | chr2.1:28782758-28782777 | None:intergenic | 30.0% | |
TTTAGTGTTCTATCAAGGAA+GGG | - | chr2.1:28781008-28781027 | MS.gene040602:intron | 30.0% | |
TTTGAGTCAACTATCAAAGA+TGG | - | chr2.1:28782639-28782658 | MS.gene040602:CDS | 30.0% | |
! | AAAGGAATGCATGATAATGA+AGG | + | chr2.1:28777817-28777836 | None:intergenic | 30.0% |
! | AAGGAATGCATGATAATGAA+GGG | + | chr2.1:28777816-28777835 | None:intergenic | 30.0% |
! | ACTTGCATTGTTGTTATTGT+TGG | + | chr2.1:28782554-28782573 | None:intergenic | 30.0% |
! | ATCTTTTGATCCTTGAACAA+TGG | - | chr2.1:28778348-28778367 | MS.gene040602:intron | 30.0% |
! | ATGTGAGACAAATTTGGTTT+CGG | + | chr2.1:28781486-28781505 | None:intergenic | 30.0% |
! | CTTTTGACATGAAAGTAAGA+TGG | + | chr2.1:28779272-28779291 | None:intergenic | 30.0% |
! | GCTTGATCTAACCTTTTTAA+AGG | - | chr2.1:28781189-28781208 | MS.gene040602:intron | 30.0% |
! | GTTCCATATTGGTTGTTATA+TGG | + | chr2.1:28782516-28782535 | None:intergenic | 30.0% |
! | GTTTTGTAGATAGGAGAATT+TGG | + | chr2.1:28781611-28781630 | None:intergenic | 30.0% |
!! | AATACAAGTGGATTAACCAT+TGG | + | chr2.1:28779680-28779699 | None:intergenic | 30.0% |
!! | ATTTTGATAAGGGTAGATTG+AGG | - | chr2.1:28778107-28778126 | MS.gene040602:intron | 30.0% |
!!! | AGGTAATTTTGGTTCCATAT+TGG | + | chr2.1:28782527-28782546 | None:intergenic | 30.0% |
!!! | CAAGGGCAAAATAGTTTTTT+AGG | - | chr2.1:28779826-28779845 | MS.gene040602:intron | 30.0% |
!!! | TTTCGAGTTTTACATATTGC+TGG | - | chr2.1:28779228-28779247 | MS.gene040602:intron | 30.0% |
AACAATGCAAGTACATTTGG+AGG | - | chr2.1:28782562-28782581 | MS.gene040602:intron | 35.0% | |
AATTCAGAGAGGATCTACTT+AGG | + | chr2.1:28781554-28781573 | None:intergenic | 35.0% | |
AATTTGTCTCACATGGCTAT+TGG | - | chr2.1:28781492-28781511 | MS.gene040602:intron | 35.0% | |
AGAGAGACTTATCATTAGGA+GGG | - | chr2.1:28779310-28779329 | MS.gene040602:CDS | 35.0% | |
AGATGGACATAGACTTAGTT+TGG | + | chr2.1:28779255-28779274 | None:intergenic | 35.0% | |
ATAGCCATGTGAGACAAATT+TGG | + | chr2.1:28781492-28781511 | None:intergenic | 35.0% | |
ATAGCTGTAACCATTGTTCA+AGG | + | chr2.1:28778361-28778380 | None:intergenic | 35.0% | |
ATCTCAACAATTGATGGAAG+AGG | - | chr2.1:28780030-28780049 | MS.gene040602:intron | 35.0% | |
ATGCATGAGTTTCGTATTGA+GGG | - | chr2.1:28781060-28781079 | MS.gene040602:intron | 35.0% | |
ATTCATATATACACGCACCA+TGG | - | chr2.1:28778936-28778955 | MS.gene040602:intron | 35.0% | |
CATACCAGGAAAGTAATACA+AGG | + | chr2.1:28781388-28781407 | None:intergenic | 35.0% | |
CTAAAGGGAGAAAAACTGAA+TGG | - | chr2.1:28781034-28781053 | MS.gene040602:intron | 35.0% | |
CTTGCTCATATTCATCTGTA+TGG | + | chr2.1:28782444-28782463 | None:intergenic | 35.0% | |
CTTTAGTGTTCTATCAAGGA+AGG | - | chr2.1:28781007-28781026 | MS.gene040602:intron | 35.0% | |
GAAACCAAATTTGTCTCACA+TGG | - | chr2.1:28781485-28781504 | MS.gene040602:intron | 35.0% | |
GAAGACATCTCAACAATTGA+TGG | - | chr2.1:28780024-28780043 | MS.gene040602:intron | 35.0% | |
GATAAAGGGTCTAAGCTATA+AGG | + | chr2.1:28782592-28782611 | None:intergenic | 35.0% | |
GCATAATCTTGTGTATATCC+AGG | - | chr2.1:28782273-28782292 | MS.gene040602:intron | 35.0% | |
GTCAACATCAATCATGAGAA+AGG | + | chr2.1:28777728-28777747 | None:intergenic | 35.0% | |
GTGTGATTACTTGATGAAGA+AGG | - | chr2.1:28777687-28777706 | MS.gene040602:CDS | 35.0% | |
TAACTCTAAGTTCAAACCAG+TGG | - | chr2.1:28781885-28781904 | MS.gene040602:intron | 35.0% | |
TAATAGAGATAGGTAGGTAC+AGG | - | chr2.1:28778753-28778772 | MS.gene040602:intron | 35.0% | |
TACTTTCCTGGTATGAATGA+CGG | - | chr2.1:28781393-28781412 | MS.gene040602:intron | 35.0% | |
TAGAAATTGTTCCACATGTG+GGG | + | chr2.1:28782757-28782776 | None:intergenic | 35.0% | |
TATATGGTTGTAGATTGGGT+TGG | + | chr2.1:28782500-28782519 | None:intergenic | 35.0% | |
TATGCATGAGTTTCGTATTG+AGG | - | chr2.1:28781059-28781078 | MS.gene040602:intron | 35.0% | |
TGACTCGATGACCTTAATAT+GGG | - | chr2.1:28781765-28781784 | MS.gene040602:intron | 35.0% | |
TGAGAGTTACTTATCTGAAG+TGG | - | chr2.1:28782726-28782745 | MS.gene040602:CDS | 35.0% | |
TGTGTATATCCAGGAAGATT+GGG | - | chr2.1:28782282-28782301 | MS.gene040602:intron | 35.0% | |
TTCATCACTTCCAGCATTAA+TGG | - | chr2.1:28782387-28782406 | MS.gene040602:intron | 35.0% | |
TTGAACAATGGTTACAGCTA+TGG | - | chr2.1:28778360-28778379 | MS.gene040602:intron | 35.0% | |
TTGTGTATATCCAGGAAGAT+TGG | - | chr2.1:28782281-28782300 | MS.gene040602:intron | 35.0% | |
! | AAAAATGACTATAGGGCACT+TGG | - | chr2.1:28781279-28781298 | MS.gene040602:intron | 35.0% |
! | CATTCAGTTTTTCTCCCTTT+AGG | + | chr2.1:28781036-28781055 | None:intergenic | 35.0% |
! | GAGAGTTACTTATCTGAAGT+GGG | - | chr2.1:28782727-28782746 | MS.gene040602:CDS | 35.0% |
! | GTTTTATATGCATGATCGTG+AGG | - | chr2.1:28779355-28779374 | MS.gene040602:CDS | 35.0% |
! | TCAGAGCATTAATACTAACC+AGG | + | chr2.1:28777778-28777797 | None:intergenic | 35.0% |
! | TTGACTCGATGACCTTAATA+TGG | - | chr2.1:28781764-28781783 | MS.gene040602:intron | 35.0% |
! | TTGTTGTTATTGTTGGCTAG+AGG | + | chr2.1:28782547-28782566 | None:intergenic | 35.0% |
!! | ATAGCCTTGTATTACTTTCC+TGG | - | chr2.1:28781381-28781400 | MS.gene040602:intron | 35.0% |
!! | GAAATCGCCATAACTAGTTT+TGG | - | chr2.1:28779942-28779961 | MS.gene040602:intron | 35.0% |
!! | TTGTTGGCTAGAGGTAATTT+TGG | + | chr2.1:28782538-28782557 | None:intergenic | 35.0% |
!!! | GGTTTGGTTTTGAGAAAACA+TGG | + | chr2.1:28782479-28782498 | None:intergenic | 35.0% |
ACTGCACAATTGTACATGCA+GGG | + | chr2.1:28778162-28778181 | None:intergenic | 40.0% | |
AGAGACCGTAAATATGCAAC+AGG | - | chr2.1:28780886-28780905 | MS.gene040602:intron | 40.0% | |
ATATACACGCACCATGGAAA+GGG | - | chr2.1:28778942-28778961 | MS.gene040602:intron | 40.0% | |
ATTCGGAGGGATCTAAAGAA+GGG | + | chr2.1:28781920-28781939 | None:intergenic | 40.0% | |
CATCTGTATGGAATTGAGCT+TGG | + | chr2.1:28782432-28782451 | None:intergenic | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | - | chr2.1:28782043-28782062 | MS.gene040602:intron | 40.0% | |
GAAAAAGAAACTGTTAGGGG+TGG | - | chr2.1:28779993-28780012 | MS.gene040602:intron | 40.0% | |
GACTCGATGACCTTAATATG+GGG | - | chr2.1:28781766-28781785 | MS.gene040602:intron | 40.0% | |
GAGACCGTAAATATGCAACA+GGG | - | chr2.1:28780887-28780906 | MS.gene040602:intron | 40.0% | |
GAGAGAGACTTATCATTAGG+AGG | - | chr2.1:28779309-28779328 | MS.gene040602:CDS | 40.0% | |
GAGTAACATAAGCATGGTTG+AGG | - | chr2.1:28777615-28777634 | MS.gene040602:CDS | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | - | chr2.1:28782040-28782059 | MS.gene040602:intron | 40.0% | |
GCTGAGAGAGACTTATCATT+AGG | - | chr2.1:28779306-28779325 | MS.gene040602:CDS | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | + | chr2.1:28782032-28782051 | None:intergenic | 40.0% | |
GTAGCCCTGTTGCATATTTA+CGG | + | chr2.1:28780894-28780913 | None:intergenic | 40.0% | |
TACACAAAACCCAATCTTCC+TGG | + | chr2.1:28782294-28782313 | None:intergenic | 40.0% | |
TACTAACCAGGAATATCCCA+TGG | + | chr2.1:28777766-28777785 | None:intergenic | 40.0% | |
TATATACACGCACCATGGAA+AGG | - | chr2.1:28778941-28778960 | MS.gene040602:intron | 40.0% | |
TATTCGGAGGGATCTAAAGA+AGG | + | chr2.1:28781921-28781940 | None:intergenic | 40.0% | |
TGAGAAAACATGGAGAAGCA+GGG | + | chr2.1:28782469-28782488 | None:intergenic | 40.0% | |
TGTGGCTGAAAAATAGGAAG+TGG | - | chr2.1:28782066-28782085 | MS.gene040602:intron | 40.0% | |
TTGAGAAAACATGGAGAAGC+AGG | + | chr2.1:28782470-28782489 | None:intergenic | 40.0% | |
TTGTACATGCAGGGGATTAT+AGG | + | chr2.1:28778153-28778172 | None:intergenic | 40.0% | |
TTTCGTATTGAGGGTTCTCA+TGG | - | chr2.1:28781069-28781088 | MS.gene040602:intron | 40.0% | |
!! | AGGAAGATTGGGTTTTGTGT+AGG | - | chr2.1:28782293-28782312 | MS.gene040602:intron | 40.0% |
!! | GGAAGATTGGGTTTTGTGTA+GGG | - | chr2.1:28782294-28782313 | MS.gene040602:intron | 40.0% |
AAAGGGTCATCACCAAGCTT+AGG | - | chr2.1:28782691-28782710 | MS.gene040602:CDS | 45.0% | |
AACTGCATCAGGCTATTGGA+AGG | - | chr2.1:28780927-28780946 | MS.gene040602:intron | 45.0% | |
AATCCCACCACCCCATATTA+AGG | + | chr2.1:28781779-28781798 | None:intergenic | 45.0% | |
ACAAATCGTGCAACTGCATC+AGG | - | chr2.1:28780916-28780935 | MS.gene040602:intron | 45.0% | |
ACCTTAACAAGTGTGAGCCA+TGG | - | chr2.1:28777746-28777765 | MS.gene040602:CDS | 45.0% | |
ACTGTCTACATCCCTTTCCA+TGG | + | chr2.1:28778956-28778975 | None:intergenic | 45.0% | |
ATGACCTTAATATGGGGTGG+TGG | - | chr2.1:28781772-28781791 | MS.gene040602:intron | 45.0% | |
CACACAAGCTCTTCATCTCT+AGG | + | chr2.1:28777670-28777689 | None:intergenic | 45.0% | |
CACTGCACAATTGTACATGC+AGG | + | chr2.1:28778163-28778182 | None:intergenic | 45.0% | |
CCTTAACAAGTGTGAGCCAT+GGG | - | chr2.1:28777747-28777766 | MS.gene040602:CDS | 45.0% | |
CTAGGATGAAATCTGAACCC+TGG | + | chr2.1:28777652-28777671 | None:intergenic | 45.0% | |
CTATTGGAAGGCAACAGGAA+AGG | - | chr2.1:28780939-28780958 | MS.gene040602:intron | 45.0% | |
CTGCACAATTGTACATGCAG+GGG | + | chr2.1:28778161-28778180 | None:intergenic | 45.0% | |
GAAAGGGATGTAGACAGTTG+AGG | - | chr2.1:28778958-28778977 | MS.gene040602:intron | 45.0% | |
GAACTTCCTTCACCTAAGCT+TGG | + | chr2.1:28782706-28782725 | None:intergenic | 45.0% | |
GACAGAGCTATCCTTCGTAA+GGG | - | chr2.1:28780961-28780980 | MS.gene040602:intron | 45.0% | |
GCTACAAAACCTCCAAGCAT+GGG | - | chr2.1:28782340-28782359 | MS.gene040602:intron | 45.0% | |
GGTAGTTGCTATGATGACAC+AGG | - | chr2.1:28782361-28782380 | MS.gene040602:intron | 45.0% | |
GTGGGAGAGGGATTATGTAT+TGG | + | chr2.1:28780423-28780442 | None:intergenic | 45.0% | |
TAGAGATAGGTAGGTACAGG+TGG | - | chr2.1:28778756-28778775 | MS.gene040602:intron | 45.0% | |
TCATAGCAACTACCCATGCT+TGG | + | chr2.1:28782355-28782374 | None:intergenic | 45.0% | |
TCATCACCAAGCTTAGGTGA+AGG | - | chr2.1:28782697-28782716 | MS.gene040602:CDS | 45.0% | |
TCGATGACCTTAATATGGGG+TGG | - | chr2.1:28781769-28781788 | MS.gene040602:intron | 45.0% | |
TGACCTTAATATGGGGTGGT+GGG | - | chr2.1:28781773-28781792 | MS.gene040602:intron | 45.0% | |
TGCTACAAAACCTCCAAGCA+TGG | - | chr2.1:28782339-28782358 | MS.gene040602:intron | 45.0% | |
TTACCTCCGTCATTCATACC+AGG | + | chr2.1:28781402-28781421 | None:intergenic | 45.0% | |
TTTCCTGGTATGAATGACGG+AGG | - | chr2.1:28781396-28781415 | MS.gene040602:intron | 45.0% | |
! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr2.1:28782060-28782079 | MS.gene040602:intron | 45.0% |
!! | ATCAAGGAAGGGCACCTAAA+GGG | - | chr2.1:28781019-28781038 | MS.gene040602:intron | 45.0% |
!! | GGTTGTAGATTGGGTTGGTT+TGG | + | chr2.1:28782495-28782514 | None:intergenic | 45.0% |
!! | TATCAAGGAAGGGCACCTAA+AGG | - | chr2.1:28781018-28781037 | MS.gene040602:intron | 45.0% |
!!! | AGCTTGGTGATGACCCTTTT+AGG | + | chr2.1:28782690-28782709 | None:intergenic | 45.0% |
!! | AAATAATATTATTTATACTT+AGG | - | chr2.1:28778818-28778837 | MS.gene040602:intron | 5.0% |
!!! | AAAATATTTTTGATTAATTA+AGG | + | chr2.1:28779055-28779074 | None:intergenic | 5.0% |
!!! | ATTTTTTTATAAATAAATGA+TGG | + | chr2.1:28778891-28778910 | None:intergenic | 5.0% |
!!! | TAATCAAAAATATTTTTATT+TGG | - | chr2.1:28779059-28779078 | MS.gene040602:intron | 5.0% |
!!! | TTCTTTTTTATAAATATTTT+TGG | - | chr2.1:28781254-28781273 | MS.gene040602:intron | 5.0% |
AGCCACACCTCCTTGAATTG+TGG | + | chr2.1:28782053-28782072 | None:intergenic | 50.0% | |
GGACAGAGCTATCCTTCGTA+AGG | - | chr2.1:28780960-28780979 | MS.gene040602:intron | 50.0% | |
GGATGAAATCTGAACCCTGG+TGG | + | chr2.1:28777649-28777668 | None:intergenic | 50.0% | |
GTGCAACTGCATCAGGCTAT+TGG | - | chr2.1:28780923-28780942 | MS.gene040602:intron | 50.0% | |
TAGCAACTACCCATGCTTGG+AGG | + | chr2.1:28782352-28782371 | None:intergenic | 50.0% | |
TCAGGCTATTGGAAGGCAAC+AGG | - | chr2.1:28780934-28780953 | MS.gene040602:intron | 50.0% | |
TGCCACAATTCAAGGAGGTG+TGG | - | chr2.1:28782048-28782067 | MS.gene040602:intron | 50.0% | |
TGTGAGCCATGGGATATTCC+TGG | - | chr2.1:28777757-28777776 | MS.gene040602:CDS | 50.0% | |
TTGAGGCAAAGCTACCACCA+GGG | - | chr2.1:28777632-28777651 | MS.gene040602:CDS | 50.0% | |
! | CCCATGGCTCACACTTGTTA+AGG | + | chr2.1:28777750-28777769 | None:intergenic | 50.0% |
!! | CAACAAGAGTGCCCTTACGA+AGG | + | chr2.1:28780975-28780994 | None:intergenic | 50.0% |
!! | CTTCGTAAGGGCACTCTTGT+TGG | - | chr2.1:28780973-28780992 | MS.gene040602:intron | 50.0% |
AAGTGGGTATGCCCCACATG+TGG | - | chr2.1:28782743-28782762 | MS.gene040602:CDS | 55.0% | |
CAGAAGCAGCATGTGTGGGA+GGG | - | chr2.1:28780839-28780858 | MS.gene040602:intron | 55.0% | |
CATGTGTGGGAGGGAAAGAG+TGG | - | chr2.1:28780848-28780867 | MS.gene040602:intron | 55.0% | |
GGTGCAGAAGCAGCATGTGT+GGG | - | chr2.1:28780835-28780854 | MS.gene040602:intron | 55.0% | |
GTTGAGGCAAAGCTACCACC+AGG | - | chr2.1:28777631-28777650 | MS.gene040602:CDS | 55.0% | |
TGGTGCAGAAGCAGCATGTG+TGG | - | chr2.1:28780834-28780853 | MS.gene040602:intron | 55.0% | |
GCAGAAGCAGCATGTGTGGG+AGG | - | chr2.1:28780838-28780857 | MS.gene040602:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 28777613 | 28782777 | 28777613 | ID=MS.gene040602 |
chr2.1 | mRNA | 28777613 | 28782777 | 28777613 | ID=MS.gene040602.t1;Parent=MS.gene040602 |
chr2.1 | exon | 28782612 | 28782777 | 28782612 | ID=MS.gene040602.t1.exon1;Parent=MS.gene040602.t1 |
chr2.1 | CDS | 28782612 | 28782777 | 28782612 | ID=cds.MS.gene040602.t1;Parent=MS.gene040602.t1 |
chr2.1 | exon | 28779274 | 28779548 | 28779274 | ID=MS.gene040602.t1.exon2;Parent=MS.gene040602.t1 |
chr2.1 | CDS | 28779274 | 28779548 | 28779274 | ID=cds.MS.gene040602.t1;Parent=MS.gene040602.t1 |
chr2.1 | exon | 28777613 | 28778095 | 28777613 | ID=MS.gene040602.t1.exon3;Parent=MS.gene040602.t1 |
chr2.1 | CDS | 28777613 | 28778095 | 28777613 | ID=cds.MS.gene040602.t1;Parent=MS.gene040602.t1 |
Gene Sequence |
Protein sequence |