Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040816.t1 | XP_013466739.1 | 94.2 | 308 | 16 | 1 | 1 | 308 | 1 | 306 | 2.30E-145 | 525 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040816.t1 | A0A072VRN1 | 94.2 | 308 | 16 | 1 | 1 | 308 | 1 | 306 | 1.7e-145 | 525.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene040816.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040816.t1 | MTR_1g034500 | 94.156 | 308 | 16 | 1 | 1 | 308 | 1 | 306 | 0.0 | 601 |
| MS.gene040816.t1 | MTR_2g045670 | 63.666 | 311 | 62 | 8 | 1 | 309 | 20 | 281 | 1.98e-122 | 352 |
| MS.gene040816.t1 | MTR_2g045700 | 64.309 | 311 | 69 | 9 | 1 | 309 | 1 | 271 | 2.25e-120 | 347 |
| MS.gene040816.t1 | MTR_2g045630 | 66.129 | 248 | 57 | 7 | 76 | 308 | 42 | 277 | 2.46e-98 | 291 |
| MS.gene040816.t1 | MTR_8g077950 | 48.750 | 80 | 41 | 0 | 224 | 303 | 200 | 279 | 3.75e-20 | 88.6 |
| MS.gene040816.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 286 | 380 | 4.66e-12 | 66.6 |
| MS.gene040816.t1 | MTR_5g028850 | 35.354 | 99 | 60 | 1 | 198 | 296 | 284 | 378 | 5.18e-12 | 66.2 |
| MS.gene040816.t1 | MTR_8g070820 | 36.709 | 79 | 50 | 0 | 213 | 291 | 296 | 374 | 4.41e-11 | 63.5 |
| MS.gene040816.t1 | MTR_7g116890 | 24.384 | 365 | 189 | 14 | 3 | 296 | 6 | 354 | 8.91e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040816.t1 | AT4G36730 | 25.000 | 304 | 203 | 6 | 12 | 303 | 9 | 299 | 1.05e-23 | 99.0 |
| MS.gene040816.t1 | AT4G36730 | 25.649 | 308 | 198 | 8 | 12 | 303 | 9 | 301 | 9.66e-23 | 96.3 |
| MS.gene040816.t1 | AT2G35530 | 41.176 | 68 | 40 | 0 | 224 | 291 | 305 | 372 | 9.14e-13 | 68.6 |
| MS.gene040816.t1 | AT2G46270 | 24.516 | 310 | 200 | 10 | 4 | 291 | 6 | 303 | 1.46e-11 | 64.7 |
| MS.gene040816.t1 | AT2G46270 | 24.516 | 310 | 200 | 10 | 4 | 291 | 6 | 303 | 1.46e-11 | 64.7 |
| MS.gene040816.t1 | AT1G32150 | 31.515 | 165 | 97 | 5 | 138 | 291 | 203 | 362 | 4.48e-11 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGTCTGGCTCAGAATTT+AGG | 0.161997 | 1.2:+19091878 | MS.gene040816:CDS |
| AACAACTACGTGAGGTTTAT+TGG | 0.185748 | 1.2:-19090895 | None:intergenic |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | 1.2:+19091195 | MS.gene040816:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | 1.2:-19091677 | None:intergenic |
| ACTGGGGAATCAAGAGAATT+TGG | 0.246551 | 1.2:+19091276 | MS.gene040816:CDS |
| TGCAAGTGGATGATTATAAA+AGG | 0.250430 | 1.2:-19090672 | None:intergenic |
| TCCCCAGTCATTAAACTTAC+AGG | 0.268465 | 1.2:-19091261 | None:intergenic |
| TAGCAAATAAGTTGAAATCT+TGG | 0.305874 | 1.2:-19091227 | None:intergenic |
| TGTGGTAACATAGGTTTGTT+TGG | 0.349768 | 1.2:-19090485 | None:intergenic |
| CTGGTCTGGCTCAGAATTTA+GGG | 0.370245 | 1.2:+19091879 | MS.gene040816:CDS |
| GAAGAGCTAGTTAAGAAGTA+TGG | 0.383568 | 1.2:+19096350 | MS.gene040816:CDS |
| AATAGATCTGCAATTGATTC+TGG | 0.403345 | 1.2:-19096374 | None:intergenic |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | 1.2:+19090715 | MS.gene040816:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 1.2:+19093271 | MS.gene040816:CDS |
| AAGGAAGAATCCACTCCGTT+TGG | 0.441874 | 1.2:+19090317 | MS.gene040816:CDS |
| TTCCTTGTAGAAAATCCATC+TGG | 0.463105 | 1.2:+19091860 | MS.gene040816:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | 1.2:+19094424 | MS.gene040816:CDS |
| GCAAGTGGATGATTATAAAA+GGG | 0.464969 | 1.2:-19090671 | None:intergenic |
| GGATGATTATAAAAGGGGCT+TGG | 0.468279 | 1.2:-19090665 | None:intergenic |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | 1.2:+19090337 | MS.gene040816:CDS |
| TGTAGAAAATCCATCTGGTC+TGG | 0.486514 | 1.2:+19091865 | MS.gene040816:intron |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | 1.2:+19094370 | MS.gene040816:CDS |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | 1.2:-19094406 | None:intergenic |
| AACAGGCTTATTACAATCCC+GGG | 0.494380 | 1.2:+19090636 | MS.gene040816:intron |
| GTTAAAATGATGGACCTCAA+TGG | 0.494777 | 1.2:-19094468 | None:intergenic |
| AAACAGGCTTATTACAATCC+CGG | 0.495086 | 1.2:+19090635 | MS.gene040816:intron |
| GGTTTATTGGAGAGCCTCAC+GGG | 0.499606 | 1.2:-19090882 | None:intergenic |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | 1.2:-19090344 | None:intergenic |
| CAACCTGTAAGTTTAATGAC+TGG | 0.518291 | 1.2:+19091258 | MS.gene040816:CDS |
| AACCTGTAAGTTTAATGACT+GGG | 0.521729 | 1.2:+19091259 | MS.gene040816:CDS |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | 1.2:-19090701 | None:intergenic |
| AAATTCTGAGCCAGACCAGA+TGG | 0.553977 | 1.2:-19091875 | None:intergenic |
| ACATTGGACTACAGCTATGC+AGG | 0.556528 | 1.2:+19090505 | MS.gene040816:CDS |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | 1.2:-19091337 | None:intergenic |
| GTAGTCCAATGTGGTAACAT+AGG | 0.564454 | 1.2:-19090494 | None:intergenic |
| AGGTTTATTGGAGAGCCTCA+CGG | 0.566356 | 1.2:-19090883 | None:intergenic |
| TGGAAGCAAGAGATCACCAG+AGG | 0.574208 | 1.2:+19091435 | MS.gene040816:CDS |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | 1.2:+19091698 | MS.gene040816:CDS |
| AAAGGGGCTTGGAGTAGACC+CGG | 0.576933 | 1.2:-19090654 | None:intergenic |
| AAATTGTAAGGTCTTCCAAA+CGG | 0.581928 | 1.2:-19090332 | None:intergenic |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | 1.2:-19090686 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | 1.2:+19090298 | None:intergenic |
| ACAAACCTATGTTACCACAT+TGG | 0.603220 | 1.2:+19090489 | MS.gene040816:CDS |
| CAAGTGGATGATTATAAAAG+GGG | 0.603697 | 1.2:-19090670 | None:intergenic |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | 1.2:+19094415 | MS.gene040816:CDS |
| TAAACCTCACGTAGTTGTTG+AGG | 0.609827 | 1.2:+19090899 | MS.gene040816:CDS |
| CACCACAAAGAGTTTCAAGT+AGG | 0.611543 | 1.2:-19096407 | None:intergenic |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | 1.2:+19094454 | MS.gene040816:CDS |
| GGAAGCAAGAGATCACCAGA+GGG | 0.616601 | 1.2:+19091436 | MS.gene040816:CDS |
| AACATCAACGTCAACAACGT+CGG | 0.620687 | 1.2:-19091924 | None:intergenic |
| GAATTTAGGGACAGTCGTCA+AGG | 0.625189 | 1.2:+19091892 | MS.gene040816:CDS |
| ACCTGTAAGTTTAATGACTG+GGG | 0.644193 | 1.2:+19091260 | MS.gene040816:CDS |
| CTCACCTCAACAACTACGTG+AGG | 0.653028 | 1.2:-19090903 | None:intergenic |
| AAGGGGCTTGGAGTAGACCC+GGG | 0.660338 | 1.2:-19090653 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | 1.2:-19090362 | None:intergenic |
| TGTGTGCGCAGTGCAGCAAG+TGG | 0.664216 | 1.2:+19091415 | MS.gene040816:intron |
| GTAAGGTCTTCCAAACGGAG+TGG | 0.675114 | 1.2:-19090327 | None:intergenic |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | 1.2:+19091694 | MS.gene040816:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | 1.2:+19091325 | MS.gene040816:CDS |
| TGCATAGCTGTAGTCCAATG+TGG | 0.721179 | 1.2:-19090503 | None:intergenic |
| ATGCTCTACATGATCCCGTG+AGG | 0.722666 | 1.2:+19090868 | MS.gene040816:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAACTAAAAAACT+AGG | + | chr1.2:19094623-19094642 | MS.gene040816:intron | 10.0% |
| !! | ATTTATTTATGATATACTAT+TGG | - | chr1.2:19095778-19095797 | None:intergenic | 10.0% |
| !! | TATTAAATAAAATTAGAGTA+CGG | - | chr1.2:19093505-19093524 | None:intergenic | 10.0% |
| !! | TTTATTATAAGATAATCAAA+AGG | - | chr1.2:19091740-19091759 | None:intergenic | 10.0% |
| !! | AAAATGTAAAAAGAAAAAGA+TGG | + | chr1.2:19093422-19093441 | MS.gene040816:intron | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | + | chr1.2:19092420-19092439 | MS.gene040816:intron | 15.0% |
| !! | TATCATAGGTTATAAATAAT+AGG | - | chr1.2:19096113-19096132 | None:intergenic | 15.0% |
| !! | TTAAAATTATTCTTTAGTAC+AGG | + | chr1.2:19091597-19091616 | MS.gene040816:intron | 15.0% |
| !! | TTCTTTAATGAATACTAAAA+CGG | - | chr1.2:19095369-19095388 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | - | chr1.2:19091396-19091415 | None:intergenic | 15.0% |
| !!! | ATACTTTTGTACTTAATAAA+AGG | + | chr1.2:19094648-19094667 | MS.gene040816:intron | 15.0% |
| !!! | ATATTTTCTGTAATTATATG+AGG | - | chr1.2:19093359-19093378 | None:intergenic | 15.0% |
| !!! | GAAATTTTCATATTTCTTTA+GGG | + | chr1.2:19091024-19091043 | MS.gene040816:intron | 15.0% |
| !!! | TCTTCTTTTAAATTTTAAAC+AGG | + | chr1.2:19090619-19090638 | MS.gene040816:intron | 15.0% |
| !!! | TGAAATTTTCATATTTCTTT+AGG | + | chr1.2:19091023-19091042 | MS.gene040816:intron | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | - | chr1.2:19094269-19094288 | None:intergenic | 15.0% |
| !! | AAATGTCAAGTAGAAAAAAT+AGG | - | chr1.2:19093604-19093623 | None:intergenic | 20.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | + | chr1.2:19091572-19091591 | MS.gene040816:intron | 20.0% |
| !! | AAGTTTAATTCATAACTATC+TGG | + | chr1.2:19093148-19093167 | MS.gene040816:intron | 20.0% |
| !! | ACCTTCTTAAAAAATATGTT+TGG | - | chr1.2:19095905-19095924 | None:intergenic | 20.0% |
| !! | ATAAAACTCAACAAATAAAG+AGG | - | chr1.2:19094497-19094516 | None:intergenic | 20.0% |
| !! | ATATATCTATTGAAAGGTTT+AGG | - | chr1.2:19090929-19090948 | None:intergenic | 20.0% |
| !! | ATGATGTCTATAAATAACAA+GGG | - | chr1.2:19094951-19094970 | None:intergenic | 20.0% |
| !! | ATTTATGATATACTATTGGA+GGG | - | chr1.2:19095774-19095793 | None:intergenic | 20.0% |
| !! | CAATGAATATATCTATTGAA+AGG | - | chr1.2:19090935-19090954 | None:intergenic | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | + | chr1.2:19092531-19092550 | MS.gene040816:intron | 20.0% |
| !! | TAAAACTCAACAAATAAAGA+GGG | - | chr1.2:19094496-19094515 | None:intergenic | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | + | chr1.2:19094031-19094050 | MS.gene040816:intron | 20.0% |
| !! | TATATCATCTCAAAATCTTA+AGG | + | chr1.2:19094819-19094838 | MS.gene040816:intron | 20.0% |
| !! | TATTTATGATATACTATTGG+AGG | - | chr1.2:19095775-19095794 | None:intergenic | 20.0% |
| !! | TCTTTAATGAATACTAAAAC+GGG | - | chr1.2:19095368-19095387 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | - | chr1.2:19093767-19093786 | None:intergenic | 20.0% |
| !! | TTGTAACAAACTTTCTAATT+AGG | + | chr1.2:19096138-19096157 | MS.gene040816:intron | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | + | chr1.2:19091147-19091166 | MS.gene040816:intron | 20.0% |
| !!! | ATGTTTGAAAAGTTTTTTTG+TGG | + | chr1.2:19091997-19092016 | MS.gene040816:intron | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | - | chr1.2:19091397-19091416 | None:intergenic | 20.0% |
| !!! | GAGTTGAAAAAAAACTTTTT+GGG | - | chr1.2:19093483-19093502 | None:intergenic | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | - | chr1.2:19092906-19092925 | None:intergenic | 20.0% |
| !!! | GTTTTAGTATTCATTAAAGA+AGG | + | chr1.2:19095368-19095387 | MS.gene040816:intron | 20.0% |
| !!! | TAAGATTTTGAGATGATATA+TGG | - | chr1.2:19094819-19094838 | None:intergenic | 20.0% |
| !!! | TAGTAATGGAAGATAATATT+TGG | - | chr1.2:19094170-19094189 | None:intergenic | 20.0% |
| !!! | TTATTCAAAGCTTTTGATAT+TGG | + | chr1.2:19096230-19096249 | MS.gene040816:intron | 20.0% |
| !!! | TTTTTTCCAAATAAAGAAGT+AGG | + | chr1.2:19096069-19096088 | MS.gene040816:intron | 20.0% |
| ! | AAAACTCAACAAATAAAGAG+GGG | - | chr1.2:19094495-19094514 | None:intergenic | 25.0% |
| ! | AAAGAAAAAGATTGTCAAAC+AGG | + | chr1.2:19093237-19093256 | MS.gene040816:CDS | 25.0% |
| ! | AACTCATACACAATTCATTA+TGG | - | chr1.2:19091116-19091135 | None:intergenic | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | - | chr1.2:19094161-19094180 | None:intergenic | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr1.2:19093271-19093290 | MS.gene040816:CDS | 25.0% |
| ! | AAGGAACTTATATAAGCAAA+AGG | + | chr1.2:19095461-19095480 | MS.gene040816:intron | 25.0% |
| ! | AATGTCTATAAATTCGACAA+TGG | + | chr1.2:19093382-19093401 | MS.gene040816:intron | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr1.2:19094008-19094027 | None:intergenic | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | + | chr1.2:19092534-19092553 | MS.gene040816:intron | 25.0% |
| ! | AGAAAGTAAATTCCTTCTTA+AGG | + | chr1.2:19093120-19093139 | MS.gene040816:intron | 25.0% |
| ! | AGGCAATTATTATTAATGAG+TGG | + | chr1.2:19094839-19094858 | MS.gene040816:intron | 25.0% |
| ! | ATACATATTACTGCTTTGTA+TGG | + | chr1.2:19090745-19090764 | MS.gene040816:intron | 25.0% |
| ! | ATGAGGATAACTATGTATAA+CGG | - | chr1.2:19093342-19093361 | None:intergenic | 25.0% |
| ! | ATGTAAAAAGAAAAAGATGG+TGG | + | chr1.2:19093425-19093444 | MS.gene040816:intron | 25.0% |
| ! | ATGTCTATAAATTCGACAAT+GGG | + | chr1.2:19093383-19093402 | MS.gene040816:intron | 25.0% |
| ! | ATTATCTTCCATTACTATTG+TGG | + | chr1.2:19094173-19094192 | MS.gene040816:intron | 25.0% |
| ! | ATTCAACTAAGATACTTGTT+TGG | + | chr1.2:19094524-19094543 | MS.gene040816:intron | 25.0% |
| ! | CAAATAGGTACAAGAATATT+GGG | - | chr1.2:19093730-19093749 | None:intergenic | 25.0% |
| ! | CATGATGTCTATAAATAACA+AGG | - | chr1.2:19094952-19094971 | None:intergenic | 25.0% |
| ! | CTAGATATGCTTAAATTTGT+TGG | + | chr1.2:19092683-19092702 | MS.gene040816:intron | 25.0% |
| ! | CTTTAATGAATACTAAAACG+GGG | - | chr1.2:19095367-19095386 | None:intergenic | 25.0% |
| ! | GAATAGAAAAACAAAGATTG+TGG | - | chr1.2:19094916-19094935 | None:intergenic | 25.0% |
| ! | GAATTAGGAACAATAAACAA+TGG | - | chr1.2:19095155-19095174 | None:intergenic | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | + | chr1.2:19094036-19094055 | MS.gene040816:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | - | chr1.2:19091680-19091699 | None:intergenic | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | - | chr1.2:19091064-19091083 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | + | chr1.2:19091694-19091713 | MS.gene040816:CDS | 25.0% |
| ! | TAAGGGATATAACAAAATGT+AGG | - | chr1.2:19095536-19095555 | None:intergenic | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | + | chr1.2:19094370-19094389 | MS.gene040816:CDS | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr1.2:19094009-19094028 | None:intergenic | 25.0% |
| ! | TAGAATGCTAGATTGAAAAA+TGG | - | chr1.2:19093073-19093092 | None:intergenic | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | - | chr1.2:19094266-19094285 | None:intergenic | 25.0% |
| ! | TATACATACAATATGTCGAT+GGG | - | chr1.2:19092627-19092646 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | - | chr1.2:19093764-19093783 | None:intergenic | 25.0% |
| ! | TATGTTTATGGTTCAATTTG+AGG | - | chr1.2:19095107-19095126 | None:intergenic | 25.0% |
| ! | TCTGTAATTTGAATTTCAGA+AGG | + | chr1.2:19091779-19091798 | MS.gene040816:intron | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+CGG | + | chr1.2:19091946-19091965 | MS.gene040816:CDS | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | + | chr1.2:19094035-19094054 | MS.gene040816:intron | 25.0% |
| ! | TTACCAATTAGTTGGTTAAT+TGG | - | chr1.2:19094995-19095014 | None:intergenic | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | - | chr1.2:19092941-19092960 | None:intergenic | 25.0% |
| ! | TTGGAAAAAAAACTTCGAAT+GGG | - | chr1.2:19096059-19096078 | None:intergenic | 25.0% |
| ! | TTGTTACAAAGAGATATCAT+AGG | - | chr1.2:19096127-19096146 | None:intergenic | 25.0% |
| ! | TTTATGATATACTATTGGAG+GGG | - | chr1.2:19095773-19095792 | None:intergenic | 25.0% |
| ! | TTTCCAATTAACCAACTAAT+TGG | + | chr1.2:19094989-19095008 | MS.gene040816:intron | 25.0% |
| ! | TTTGGAAAAAAAACTTCGAA+TGG | - | chr1.2:19096060-19096079 | None:intergenic | 25.0% |
| !! | ATGTGCGATTTTATATAGAA+GGG | - | chr1.2:19095573-19095592 | None:intergenic | 25.0% |
| !! | ATTCTAGCTAAATATGTATG+GGG | + | chr1.2:19093087-19093106 | MS.gene040816:intron | 25.0% |
| !! | CATTCTAGCTAAATATGTAT+GGG | + | chr1.2:19093086-19093105 | MS.gene040816:intron | 25.0% |
| !! | GGAGTTGAAAAAAAACTTTT+TGG | - | chr1.2:19093484-19093503 | None:intergenic | 25.0% |
| !! | TAATTGGTAACTAACTCATT+AGG | + | chr1.2:19095005-19095024 | MS.gene040816:intron | 25.0% |
| !! | TACAATTTGTTCTTGTTCTT+CGG | + | chr1.2:19091348-19091367 | MS.gene040816:intron | 25.0% |
| !! | TAGCAAATAAGTTGAAATCT+TGG | - | chr1.2:19091230-19091249 | None:intergenic | 25.0% |
| !! | TATACATACAATGTGTTGAT+GGG | - | chr1.2:19092798-19092817 | None:intergenic | 25.0% |
| !! | TATTGTTGTTGTATGATCAT+AGG | + | chr1.2:19094125-19094144 | MS.gene040816:intron | 25.0% |
| !! | TGTCTATGAAATTCATTTTC+TGG | + | chr1.2:19090985-19091004 | MS.gene040816:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr1.2:19094008-19094027 | MS.gene040816:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | - | chr1.2:19092900-19092919 | None:intergenic | 25.0% |
| !!! | AGTTGAAATCTTGGTTTTTT+TGG | - | chr1.2:19091221-19091240 | None:intergenic | 25.0% |
| !!! | ATTTTCATATTTCTTTAGGG+TGG | + | chr1.2:19091027-19091046 | MS.gene040816:intron | 25.0% |
| !!! | CAGTTTTTTAGTAAGATAAC+TGG | + | chr1.2:19092030-19092049 | MS.gene040816:intron | 25.0% |
| !!! | CATATTTTTTAAGAAGGTCT+TGG | + | chr1.2:19095907-19095926 | MS.gene040816:intron | 25.0% |
| !!! | CTTATTTTTCTTGTGTAAGA+AGG | + | chr1.2:19095942-19095961 | MS.gene040816:intron | 25.0% |
| !!! | GCCAAACATATTTTTTAAGA+AGG | + | chr1.2:19095901-19095920 | MS.gene040816:intron | 25.0% |
| !!! | TTGTTTTGAGGTTATGTTTA+TGG | - | chr1.2:19095119-19095138 | None:intergenic | 25.0% |
| !!! | TTTTCATATTTCTTTAGGGT+GGG | + | chr1.2:19091028-19091047 | MS.gene040816:intron | 25.0% |
| AAAAGTTATGTTGTAACACG+AGG | - | chr1.2:19092364-19092383 | None:intergenic | 30.0% | |
| AAAGCACATAACAAAACTCT+GGG | + | chr1.2:19093774-19093793 | MS.gene040816:intron | 30.0% | |
| AAATTGTAAGGTCTTCCAAA+CGG | - | chr1.2:19090335-19090354 | None:intergenic | 30.0% | |
| AACCTGTAAGTTTAATGACT+GGG | + | chr1.2:19091259-19091278 | MS.gene040816:CDS | 30.0% | |
| AATGCTAGATTGAAAAATGG+TGG | - | chr1.2:19093070-19093089 | None:intergenic | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | - | chr1.2:19092180-19092199 | None:intergenic | 30.0% | |
| AGGGGAATAAGAATTGAATA+AGG | - | chr1.2:19095554-19095573 | None:intergenic | 30.0% | |
| ATAAATAACAAGGGTTGAGA+GGG | - | chr1.2:19094942-19094961 | None:intergenic | 30.0% | |
| ATACATACAATATGTCGATG+GGG | - | chr1.2:19092626-19092645 | None:intergenic | 30.0% | |
| ATTCTTTAGTACAGGTCATA+TGG | + | chr1.2:19091605-19091624 | MS.gene040816:intron | 30.0% | |
| CAACAATCTTTCCCTTTATT+TGG | + | chr1.2:19093994-19094013 | MS.gene040816:intron | 30.0% | |
| CAAGTGGATGATTATAAAAG+GGG | - | chr1.2:19090673-19090692 | None:intergenic | 30.0% | |
| CAATCATTCACACATGTTAT+AGG | + | chr1.2:19092114-19092133 | MS.gene040816:intron | 30.0% | |
| CAATGAAAATGATTCCATTG+AGG | + | chr1.2:19094454-19094473 | MS.gene040816:CDS | 30.0% | |
| CACATATTAAGCACTAATGT+AGG | + | chr1.2:19092309-19092328 | MS.gene040816:intron | 30.0% | |
| CCAAATAGGTACAAGAATAT+TGG | - | chr1.2:19093731-19093750 | None:intergenic | 30.0% | |
| CCAATATTCTTGTACCTATT+TGG | + | chr1.2:19093728-19093747 | MS.gene040816:intron | 30.0% | |
| CGATTGAAAACACTAGTTAT+AGG | + | chr1.2:19092212-19092231 | MS.gene040816:intron | 30.0% | |
| CTACTAATTTGAGTGTGATT+TGG | + | chr1.2:19096316-19096335 | MS.gene040816:intron | 30.0% | |
| CTATACATACAATATGTCGA+TGG | - | chr1.2:19092628-19092647 | None:intergenic | 30.0% | |
| CTATACATACAATGTGTTGA+TGG | - | chr1.2:19092799-19092818 | None:intergenic | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | - | chr1.2:19094162-19094181 | None:intergenic | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | + | chr1.2:19090371-19090390 | MS.gene040816:intron | 30.0% | |
| GCAAGTGGATGATTATAAAA+GGG | - | chr1.2:19090674-19090693 | None:intergenic | 30.0% | |
| GGGGAATAAGAATTGAATAA+GGG | - | chr1.2:19095553-19095572 | None:intergenic | 30.0% | |
| GTCCTAAACATGCATTTAAA+TGG | + | chr1.2:19093672-19093691 | MS.gene040816:intron | 30.0% | |
| GTCGCAAAAATAAAACTCTA+AGG | + | chr1.2:19092556-19092575 | MS.gene040816:intron | 30.0% | |
| TAAACTTAGCAACCTTAAGA+AGG | - | chr1.2:19093135-19093154 | None:intergenic | 30.0% | |
| TAAAGCACATAACAAAACTC+TGG | + | chr1.2:19093773-19093792 | MS.gene040816:intron | 30.0% | |
| TAATATGTGCTCATAAAGCT+AGG | - | chr1.2:19092298-19092317 | None:intergenic | 30.0% | |
| TATAAATAACAAGGGTTGAG+AGG | - | chr1.2:19094943-19094962 | None:intergenic | 30.0% | |
| TCAGGACTTTCTTGTTAAAT+GGG | + | chr1.2:19095601-19095620 | MS.gene040816:intron | 30.0% | |
| TGAGTTAGTTACCAATTAGT+TGG | - | chr1.2:19095003-19095022 | None:intergenic | 30.0% | |
| TGCAAGTGGATGATTATAAA+AGG | - | chr1.2:19090675-19090694 | None:intergenic | 30.0% | |
| TTATAGGCACTCTTTGATAT+TGG | + | chr1.2:19092228-19092247 | MS.gene040816:intron | 30.0% | |
| TTATTGTTCCTAATTCAGCA+GGG | + | chr1.2:19095159-19095178 | MS.gene040816:intron | 30.0% | |
| TTCAACTTCCACAATAGTAA+TGG | - | chr1.2:19094184-19094203 | None:intergenic | 30.0% | |
| TTCAGGACTTTCTTGTTAAA+TGG | + | chr1.2:19095600-19095619 | MS.gene040816:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | - | chr1.2:19093899-19093918 | None:intergenic | 30.0% | |
| TTTATTGTTCCTAATTCAGC+AGG | + | chr1.2:19095158-19095177 | MS.gene040816:intron | 30.0% | |
| ! | AAATGCATGTTTAGGACATA+AGG | - | chr1.2:19093669-19093688 | None:intergenic | 30.0% |
| ! | AACTTAGCTACTTTCATGTT+AGG | - | chr1.2:19096188-19096207 | None:intergenic | 30.0% |
| ! | AATAGATCTGCAATTGATTC+TGG | - | chr1.2:19096377-19096396 | None:intergenic | 30.0% |
| ! | ATACATACAATGTGTTGATG+GGG | - | chr1.2:19092797-19092816 | None:intergenic | 30.0% |
| ! | ATGTACTGATGATACAAGTA+AGG | - | chr1.2:19090704-19090723 | None:intergenic | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | - | chr1.2:19094456-19094475 | None:intergenic | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | + | chr1.2:19091195-19091214 | MS.gene040816:CDS | 30.0% |
| ! | GATGTGCGATTTTATATAGA+AGG | - | chr1.2:19095574-19095593 | None:intergenic | 30.0% |
| ! | GCATTCTAGCTAAATATGTA+TGG | + | chr1.2:19093085-19093104 | MS.gene040816:intron | 30.0% |
| ! | GTTGTTGTTGTTGTTGTATA+TGG | - | chr1.2:19094766-19094785 | None:intergenic | 30.0% |
| ! | TGCCATTTAAATGCATGTTT+AGG | - | chr1.2:19093677-19093696 | None:intergenic | 30.0% |
| ! | TGGTGGTTCATTTTCATTAT+TGG | + | chr1.2:19093442-19093461 | MS.gene040816:intron | 30.0% |
| ! | TGTGCGATTTTATATAGAAG+GGG | - | chr1.2:19095572-19095591 | None:intergenic | 30.0% |
| ! | TGTTAGTTTCGTACAAATGT+CGG | + | chr1.2:19092457-19092476 | MS.gene040816:intron | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | - | chr1.2:19092893-19092912 | None:intergenic | 30.0% |
| !! | AATGTTTATGCATTTTGGTC+AGG | + | chr1.2:19091152-19091171 | MS.gene040816:intron | 30.0% |
| !! | AATTTGTTATAGTTTCCTCC+TGG | + | chr1.2:19094248-19094267 | MS.gene040816:intron | 30.0% |
| !! | CAAAAATAAAACTCTAAGGC+TGG | + | chr1.2:19092560-19092579 | MS.gene040816:intron | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | + | chr1.2:19090815-19090834 | MS.gene040816:intron | 30.0% |
| !! | TAGTTCTGAGTATTGTATTG+TGG | + | chr1.2:19096266-19096285 | MS.gene040816:intron | 30.0% |
| !! | TTTCATATTTCTTTAGGGTG+GGG | + | chr1.2:19091029-19091048 | MS.gene040816:intron | 30.0% |
| !!! | ATTACAAGTTGGTCTTTTGA+TGG | - | chr1.2:19095245-19095264 | None:intergenic | 30.0% |
| AAACAGGCTTATTACAATCC+CGG | + | chr1.2:19090635-19090654 | MS.gene040816:intron | 35.0% | |
| AAAGAGGGGAGTTAAAATGA+TGG | - | chr1.2:19094481-19094500 | None:intergenic | 35.0% | |
| AACAACTACGTGAGGTTTAT+TGG | - | chr1.2:19090898-19090917 | None:intergenic | 35.0% | |
| AAGAAACGAAAACTGTTAGG+AGG | + | chr1.2:19094671-19094690 | MS.gene040816:intron | 35.0% | |
| AAGCAAAAGGAGAATGAACT+AGG | + | chr1.2:19095474-19095493 | MS.gene040816:intron | 35.0% | |
| AAGGTCACAAGAAAAAGCAA+AGG | - | chr1.2:19093650-19093669 | None:intergenic | 35.0% | |
| ACAAACCTATGTTACCACAT+TGG | + | chr1.2:19090489-19090508 | MS.gene040816:CDS | 35.0% | |
| ACCTGTAAGTTTAATGACTG+GGG | + | chr1.2:19091260-19091279 | MS.gene040816:CDS | 35.0% | |
| ACGAAGATACCATCACAAAT+TGG | - | chr1.2:19090554-19090573 | None:intergenic | 35.0% | |
| ACTCTCACTAACTCATTCTA+CGG | + | chr1.2:19095505-19095524 | MS.gene040816:intron | 35.0% | |
| ACTGACAAATGTCAAACACT+CGG | + | chr1.2:19092482-19092501 | MS.gene040816:intron | 35.0% | |
| AGGAAGAAACGAAAACTGTT+AGG | + | chr1.2:19094668-19094687 | MS.gene040816:intron | 35.0% | |
| ATAGGTAGAAGAGATTAGAG+AGG | - | chr1.2:19096095-19096114 | None:intergenic | 35.0% | |
| ATATCTAGCAAGATTCGAGA+TGG | - | chr1.2:19092671-19092690 | None:intergenic | 35.0% | |
| ATATTACTGCTTTGTATGGC+AGG | + | chr1.2:19090749-19090768 | MS.gene040816:intron | 35.0% | |
| ATCAAAGAAACGATGTTCTG+AGG | + | chr1.2:19093864-19093883 | MS.gene040816:intron | 35.0% | |
| ATGCAGTACTCAAACAGAAA+AGG | + | chr1.2:19095442-19095461 | MS.gene040816:intron | 35.0% | |
| ATGTAATTGAATCCACCTAG+TGG | + | chr1.2:19094080-19094099 | MS.gene040816:intron | 35.0% | |
| CAACCTGTAAGTTTAATGAC+TGG | + | chr1.2:19091258-19091277 | MS.gene040816:CDS | 35.0% | |
| CATTATGATATGCACACACT+TGG | + | chr1.2:19092070-19092089 | MS.gene040816:intron | 35.0% | |
| CATTTGACACAATGTATCTG+AGG | - | chr1.2:19095425-19095444 | None:intergenic | 35.0% | |
| CCTAGTCCTATAAAACTCTA+AGG | + | chr1.2:19092727-19092746 | MS.gene040816:intron | 35.0% | |
| CTAACTTCGAAACATAACAG+TGG | - | chr1.2:19091545-19091564 | None:intergenic | 35.0% | |
| CTATAAATTCGACAATGGGT+TGG | + | chr1.2:19093387-19093406 | MS.gene040816:intron | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | - | chr1.2:19091340-19091359 | None:intergenic | 35.0% | |
| GAAGAGCTAGTTAAGAAGTA+TGG | + | chr1.2:19096350-19096369 | MS.gene040816:CDS | 35.0% | |
| GATAACAAAACAGCTGTGTT+TGG | + | chr1.2:19093571-19093590 | MS.gene040816:intron | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | - | chr1.2:19090365-19090384 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | + | chr1.2:19091645-19091664 | MS.gene040816:intron | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | + | chr1.2:19094132-19094151 | MS.gene040816:intron | 35.0% | |
| TACTCTGAACCAATTTGTGA+TGG | + | chr1.2:19090542-19090561 | MS.gene040816:intron | 35.0% | |
| TAGGAAAGCCTAAAATAAGC+CGG | - | chr1.2:19095860-19095879 | None:intergenic | 35.0% | |
| TAGGTACAAGAATATTGGGT+AGG | - | chr1.2:19093726-19093745 | None:intergenic | 35.0% | |
| TATGGTTCAATTTGAGGACA+GGG | - | chr1.2:19095101-19095120 | None:intergenic | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | + | chr1.2:19090715-19090734 | MS.gene040816:CDS | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | + | chr1.2:19090337-19090356 | MS.gene040816:CDS | 35.0% | |
| TTAAGCACTAATGTAGGACT+CGG | + | chr1.2:19092315-19092334 | MS.gene040816:intron | 35.0% | |
| TTATGGTTCAATTTGAGGAC+AGG | - | chr1.2:19095102-19095121 | None:intergenic | 35.0% | |
| TTCCTTGTAGAAAATCCATC+TGG | + | chr1.2:19091860-19091879 | MS.gene040816:intron | 35.0% | |
| ! | AAGTGATGGAATGTAACCAT+GGG | + | chr1.2:19092434-19092453 | MS.gene040816:intron | 35.0% |
| ! | AATGAGTTAGTGAGAGTATG+TGG | - | chr1.2:19095502-19095521 | None:intergenic | 35.0% |
| ! | ACTAGGTGGATTCAATTACA+TGG | - | chr1.2:19094081-19094100 | None:intergenic | 35.0% |
| ! | ATAGGGATGAAACTTTTGAG+GGG | - | chr1.2:19095222-19095241 | None:intergenic | 35.0% |
| ! | CTAATTTGAGTGTGATTTGG+TGG | + | chr1.2:19096319-19096338 | MS.gene040816:intron | 35.0% |
| ! | GATAGGGATGAAACTTTTGA+GGG | - | chr1.2:19095223-19095242 | None:intergenic | 35.0% |
| ! | TGTGGTAACATAGGTTTGTT+TGG | - | chr1.2:19090488-19090507 | None:intergenic | 35.0% |
| ! | TTAGCTGCATTTCTTTTGAC+AGG | + | chr1.2:19093193-19093212 | MS.gene040816:intron | 35.0% |
| !! | ATCCAGCCTTAGAGTTTTAT+AGG | - | chr1.2:19092565-19092584 | None:intergenic | 35.0% |
| !! | ATCTGAGGATTGTTTTGTCA+CGG | - | chr1.2:19095410-19095429 | None:intergenic | 35.0% |
| !! | CCTTAGAGTTTTATAGGACT+AGG | - | chr1.2:19092730-19092749 | None:intergenic | 35.0% |
| !! | GTTAAAATGATGGACCTCAA+TGG | - | chr1.2:19094471-19094490 | None:intergenic | 35.0% |
| !!! | AAGTTGGTCTTTTGATGGAT+AGG | - | chr1.2:19095240-19095259 | None:intergenic | 35.0% |
| !!! | AGTTGGTCTTTTGATGGATA+GGG | - | chr1.2:19095239-19095258 | None:intergenic | 35.0% |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | + | chr1.2:19091179-19091198 | MS.gene040816:CDS | 35.0% |
| AACAGGCTTATTACAATCCC+GGG | + | chr1.2:19090636-19090655 | MS.gene040816:intron | 40.0% | |
| AACATCAACGTCAACAACGT+CGG | - | chr1.2:19091927-19091946 | None:intergenic | 40.0% | |
| AACCTCAAAACAATCCCTCT+AGG | + | chr1.2:19095126-19095145 | MS.gene040816:intron | 40.0% | |
| AATAAACAATGGCACCCTAG+AGG | - | chr1.2:19095144-19095163 | None:intergenic | 40.0% | |
| AATACTAAAACGGGGTAGAG+AGG | - | chr1.2:19095359-19095378 | None:intergenic | 40.0% | |
| AATCGCACATCATGTTGTTC+AGG | + | chr1.2:19095583-19095602 | MS.gene040816:intron | 40.0% | |
| AATTACATCCTTTCTGTGGC+AGG | + | chr1.2:19091649-19091668 | MS.gene040816:intron | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | - | chr1.2:19092513-19092532 | None:intergenic | 40.0% | |
| ACATTCCTTACCTTACGAGT+CGG | - | chr1.2:19092275-19092294 | None:intergenic | 40.0% | |
| ACCAACTTGTAATCTCTGCA+TGG | + | chr1.2:19095252-19095271 | MS.gene040816:intron | 40.0% | |
| ACCTCAAAACAATCCCTCTA+GGG | + | chr1.2:19095127-19095146 | MS.gene040816:intron | 40.0% | |
| ACTCTGTAAAAGGAGAAGCA+CGG | + | chr1.2:19095879-19095898 | MS.gene040816:intron | 40.0% | |
| ACTGGGGAATCAAGAGAATT+TGG | + | chr1.2:19091276-19091295 | MS.gene040816:CDS | 40.0% | |
| AGGAAAGCCTAAAATAAGCC+GGG | - | chr1.2:19095859-19095878 | None:intergenic | 40.0% | |
| AGGCTTTCCTACTCTGTAAA+AGG | + | chr1.2:19095869-19095888 | MS.gene040816:intron | 40.0% | |
| AGGTTGTTATGCAAGTCGAT+AGG | + | chr1.2:19095962-19095981 | MS.gene040816:intron | 40.0% | |
| AGTGGAATTCACATCGTTAC+TGG | + | chr1.2:19094857-19094876 | MS.gene040816:intron | 40.0% | |
| ATAAACAATGGCACCCTAGA+GGG | - | chr1.2:19095143-19095162 | None:intergenic | 40.0% | |
| ATAGCTCTTCACATTCTTGC+TGG | - | chr1.2:19094349-19094368 | None:intergenic | 40.0% | |
| CAAGTACCAACAATCCCTAT+AGG | + | chr1.2:19095029-19095048 | MS.gene040816:intron | 40.0% | |
| CAATCGCAGATGACACAAAA+TGG | - | chr1.2:19092198-19092217 | None:intergenic | 40.0% | |
| CTTTCTTAGACTAGGACAGA+GGG | + | chr1.2:19090775-19090794 | MS.gene040816:intron | 40.0% | |
| GACAATACAACCCACCTATA+GGG | - | chr1.2:19095046-19095065 | None:intergenic | 40.0% | |
| GAGAGGCCTACTTCTTTATT+TGG | - | chr1.2:19096078-19096097 | None:intergenic | 40.0% | |
| GGATGATTATAAAAGGGGCT+TGG | - | chr1.2:19090668-19090687 | None:intergenic | 40.0% | |
| GTAGTCCAATGTGGTAACAT+AGG | - | chr1.2:19090497-19090516 | None:intergenic | 40.0% | |
| GTGGTATCATACTCAAAGGT+GGG | - | chr1.2:19095815-19095834 | None:intergenic | 40.0% | |
| GTGGTTGCAAAGTTCCAAAT+AGG | - | chr1.2:19093745-19093764 | None:intergenic | 40.0% | |
| TAAACCTCACGTAGTTGTTG+AGG | + | chr1.2:19090899-19090918 | MS.gene040816:CDS | 40.0% | |
| TAATTAGCAGCAACACACGA+TGG | + | chr1.2:19095323-19095342 | MS.gene040816:intron | 40.0% | |
| TACCAACAATCCCTATAGGT+GGG | + | chr1.2:19095033-19095052 | MS.gene040816:intron | 40.0% | |
| TACTGCGGATGGTAAGATTA+TGG | + | chr1.2:19091709-19091728 | MS.gene040816:intron | 40.0% | |
| TCATTTGACCCTGCTGAATT+AGG | - | chr1.2:19095170-19095189 | None:intergenic | 40.0% | |
| TCCATGCAGAGATTACAAGT+TGG | - | chr1.2:19095256-19095275 | None:intergenic | 40.0% | |
| TCCCCAGTCATTAAACTTAC+AGG | - | chr1.2:19091264-19091283 | None:intergenic | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | + | chr1.2:19091698-19091717 | MS.gene040816:CDS | 40.0% | |
| TGAAGATGAATCCCGTCAAT+TGG | + | chr1.2:19094712-19094731 | MS.gene040816:intron | 40.0% | |
| TGACAATACAACCCACCTAT+AGG | - | chr1.2:19095047-19095066 | None:intergenic | 40.0% | |
| TGAGGGGATTGACAGTAAAA+GGG | - | chr1.2:19095206-19095225 | None:intergenic | 40.0% | |
| TGTAGAAAATCCATCTGGTC+TGG | + | chr1.2:19091865-19091884 | MS.gene040816:intron | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | + | chr1.2:19091308-19091327 | MS.gene040816:CDS | 40.0% | |
| TTGAGGGGATTGACAGTAAA+AGG | - | chr1.2:19095207-19095226 | None:intergenic | 40.0% | |
| TTGGGGTTACCAATTACTAG+TGG | + | chr1.2:19091052-19091071 | MS.gene040816:intron | 40.0% | |
| TTGTACGAAACTAACACCCA+TGG | - | chr1.2:19092453-19092472 | None:intergenic | 40.0% | |
| ! | AAGTCTGCTCTTTTACCACT+AGG | - | chr1.2:19094098-19094117 | None:intergenic | 40.0% |
| ! | ATTGACCAAGAGTTGGTTCT+TGG | - | chr1.2:19094890-19094909 | None:intergenic | 40.0% |
| ! | CTGCATTTCTTTTGACAGGA+AGG | + | chr1.2:19093197-19093216 | MS.gene040816:intron | 40.0% |
| ! | GAAGTGATGGAATGTAACCA+TGG | + | chr1.2:19092433-19092452 | MS.gene040816:intron | 40.0% |
| ! | GGATAGGGATGAAACTTTTG+AGG | - | chr1.2:19095224-19095243 | None:intergenic | 40.0% |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | + | chr1.2:19094424-19094443 | MS.gene040816:CDS | 40.0% |
| ! | TGCTTCTCCTTTTACAGAGT+AGG | - | chr1.2:19095879-19095898 | None:intergenic | 40.0% |
| ! | TTGACCAAGAGTTGGTTCTT+GGG | - | chr1.2:19094889-19094908 | None:intergenic | 40.0% |
| !! | ATATTTCTTTAGGGTGGGGT+TGG | + | chr1.2:19091033-19091052 | MS.gene040816:intron | 40.0% |
| !! | ATTTGAGTGTGATTTGGTGG+TGG | + | chr1.2:19096322-19096341 | MS.gene040816:intron | 40.0% |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | + | chr1.2:19090821-19090840 | MS.gene040816:intron | 40.0% |
| !! | GACCAGATGGATTTTCTACA+AGG | - | chr1.2:19091865-19091884 | None:intergenic | 40.0% |
| !! | GTCCTATAAAACTCTAAGGC+TGG | + | chr1.2:19092731-19092750 | MS.gene040816:intron | 40.0% |
| !! | TATTTCTTTAGGGTGGGGTT+GGG | + | chr1.2:19091034-19091053 | MS.gene040816:intron | 40.0% |
| !!! | AGGACAGGGTGAATGTTTTT+TGG | - | chr1.2:19095087-19095106 | None:intergenic | 40.0% |
| !!! | GACAGGGTGAATGTTTTTTG+GGG | - | chr1.2:19095085-19095104 | None:intergenic | 40.0% |
| !!! | GGACAGGGTGAATGTTTTTT+GGG | - | chr1.2:19095086-19095105 | None:intergenic | 40.0% |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | - | chr1.2:19091318-19091337 | None:intergenic | 40.0% |
| AAAACTGTTAGGAGGTCAGG+TGG | + | chr1.2:19094679-19094698 | MS.gene040816:intron | 45.0% | |
| AAAGTGCAGGTAGCCAAGTT+AGG | - | chr1.2:19095701-19095720 | None:intergenic | 45.0% | |
| AAATTCTGAGCCAGACCAGA+TGG | - | chr1.2:19091878-19091897 | None:intergenic | 45.0% | |
| AACCCACCTATAGGGATTGT+TGG | - | chr1.2:19095038-19095057 | None:intergenic | 45.0% | |
| AAGGAAGAATCCACTCCGTT+TGG | + | chr1.2:19090317-19090336 | MS.gene040816:CDS | 45.0% | |
| AATCCCGTCAATTGGCAAAG+AGG | + | chr1.2:19094720-19094739 | MS.gene040816:intron | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | + | chr1.2:19090505-19090524 | MS.gene040816:CDS | 45.0% | |
| ACGAAAACTGTTAGGAGGTC+AGG | + | chr1.2:19094676-19094695 | MS.gene040816:intron | 45.0% | |
| ACGAGGTAGTGTGGACTTAT+TGG | - | chr1.2:19092347-19092366 | None:intergenic | 45.0% | |
| AGGTTTATTGGAGAGCCTCA+CGG | - | chr1.2:19090886-19090905 | None:intergenic | 45.0% | |
| CTTCTGCACCCAAAAATGAC+AGG | + | chr1.2:19091307-19091326 | MS.gene040816:CDS | 45.0% | |
| GAATTTAGGGACAGTCGTCA+AGG | + | chr1.2:19091892-19091911 | MS.gene040816:CDS | 45.0% | |
| GCTTTCTTAGACTAGGACAG+AGG | + | chr1.2:19090774-19090793 | MS.gene040816:intron | 45.0% | |
| GGAGGGGAAAAAAATTGCAC+AGG | - | chr1.2:19095757-19095776 | None:intergenic | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | + | chr1.2:19093292-19093311 | MS.gene040816:intron | 45.0% | |
| GGTGGTATCATACTCAAAGG+TGG | - | chr1.2:19095816-19095835 | None:intergenic | 45.0% | |
| GGTTCCTCTTTGCCAATTGA+CGG | - | chr1.2:19094727-19094746 | None:intergenic | 45.0% | |
| GTACCAACAATCCCTATAGG+TGG | + | chr1.2:19095032-19095051 | MS.gene040816:intron | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | - | chr1.2:19090802-19090821 | None:intergenic | 45.0% | |
| GTTCCTCTTTGCCAATTGAC+GGG | - | chr1.2:19094726-19094745 | None:intergenic | 45.0% | |
| TAAGCCCACTTAGTGGGATA+AGG | - | chr1.2:19094793-19094812 | None:intergenic | 45.0% | |
| TCCACAACGCTATGCCAAAT+TGG | + | chr1.2:19092924-19092943 | MS.gene040816:intron | 45.0% | |
| TCCATCTGATGTGCCTAACT+TGG | + | chr1.2:19095685-19095704 | MS.gene040816:intron | 45.0% | |
| TCTTCACATTCTTGCTGGCA+AGG | - | chr1.2:19094344-19094363 | None:intergenic | 45.0% | |
| TGAGCTGCAGTTCATGTCTT+TGG | - | chr1.2:19091814-19091833 | None:intergenic | 45.0% | |
| TGCATAGCTGTAGTCCAATG+TGG | - | chr1.2:19090506-19090525 | None:intergenic | 45.0% | |
| TGTTGTAACACGAGGTAGTG+TGG | - | chr1.2:19092356-19092375 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | + | chr1.2:19094415-19094434 | MS.gene040816:CDS | 45.0% |
| ! | ATATGGTGTTAAGCCCACTG+TGG | - | chr1.2:19094749-19094768 | None:intergenic | 45.0% |
| ! | ATGGTGTTAAGCCCACTTAG+TGG | - | chr1.2:19094800-19094819 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1.2:19094786-19094805 | MS.gene040816:intron | 45.0% |
| ! | CTGGTCTGGCTCAGAATTTA+GGG | + | chr1.2:19091879-19091898 | MS.gene040816:CDS | 45.0% |
| ! | TATGGTGTTAAGCCCACTGT+GGG | - | chr1.2:19094748-19094767 | None:intergenic | 45.0% |
| ! | TCTGCTCTTTTACCACTAGG+TGG | - | chr1.2:19094095-19094114 | None:intergenic | 45.0% |
| ! | TCTGGTCTGGCTCAGAATTT+AGG | + | chr1.2:19091878-19091897 | MS.gene040816:CDS | 45.0% |
| ! | TGGTGTTAAGCCCACTTAGT+GGG | - | chr1.2:19094799-19094818 | None:intergenic | 45.0% |
| ! | TTTTGGTCAGGATGCTGCAA+AGG | + | chr1.2:19091164-19091183 | MS.gene040816:intron | 45.0% |
| !! | ACCCTAGAGGGATTGTTTTG+AGG | - | chr1.2:19095131-19095150 | None:intergenic | 45.0% |
| !! | ATTTCTTTAGGGTGGGGTTG+GGG | + | chr1.2:19091035-19091054 | MS.gene040816:intron | 45.0% |
| !! | TAAGACCGACTCGTAAGGTA+AGG | + | chr1.2:19092267-19092286 | MS.gene040816:intron | 45.0% |
| !! | TCTCATAAGACCGACTCGTA+AGG | + | chr1.2:19092262-19092281 | MS.gene040816:intron | 45.0% |
| !! | TGAGGCACCGTGAAATTGTA+AGG | - | chr1.2:19090347-19090366 | None:intergenic | 45.0% |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | - | chr1.2:19091305-19091324 | None:intergenic | 45.0% |
| !!! | CTGTCATTTTGATCTCCCTC+TGG | - | chr1.2:19091454-19091473 | None:intergenic | 45.0% |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | - | chr1.2:19091319-19091338 | None:intergenic | 45.0% |
| !!! | AATTTTTTTATATAAATATG+TGG | + | chr1.2:19091496-19091515 | MS.gene040816:intron | 5.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | - | chr1.2:19092414-19092433 | None:intergenic | 5.0% |
| AAGTAAGGAGCAGCTGCAAG+TGG | - | chr1.2:19090689-19090708 | None:intergenic | 50.0% | |
| ACAAGATCAGTTGCGCATGC+AGG | - | chr1.2:19092970-19092989 | None:intergenic | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | + | chr1.2:19091325-19091344 | MS.gene040816:CDS | 50.0% | |
| AGGAGAATCCTGCCACAGAA+AGG | - | chr1.2:19091660-19091679 | None:intergenic | 50.0% | |
| AGGCACATCAGATGGACAAG+TGG | - | chr1.2:19095681-19095700 | None:intergenic | 50.0% | |
| ATGCTCTACATGATCCCGTG+AGG | + | chr1.2:19090868-19090887 | MS.gene040816:CDS | 50.0% | |
| CAGATGGACAAGTGGGAGTA+GGG | - | chr1.2:19095673-19095692 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1.2:19094788-19094807 | None:intergenic | 50.0% | |
| CTACCTGCACTTTGCTGACA+TGG | + | chr1.2:19095708-19095727 | MS.gene040816:intron | 50.0% | |
| CTCACCTCAACAACTACGTG+AGG | - | chr1.2:19090906-19090925 | None:intergenic | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | + | chr1.2:19091312-19091331 | MS.gene040816:CDS | 50.0% | |
| GCCAAGTTAGGCACATCAGA+TGG | - | chr1.2:19095689-19095708 | None:intergenic | 50.0% | |
| GCCAATTTGGCATAGCGTTG+TGG | - | chr1.2:19092928-19092947 | None:intergenic | 50.0% | |
| GCTTAGCAAGCGTTTGTGCT+AGG | - | chr1.2:19094409-19094428 | None:intergenic | 50.0% | |
| GGAAGCAAGAGATCACCAGA+GGG | + | chr1.2:19091436-19091455 | MS.gene040816:CDS | 50.0% | |
| GGCACATCAGATGGACAAGT+GGG | - | chr1.2:19095680-19095699 | None:intergenic | 50.0% | |
| GGCGGTGGTATCATACTCAA+AGG | - | chr1.2:19095819-19095838 | None:intergenic | 50.0% | |
| GGTTTATTGGAGAGCCTCAC+GGG | - | chr1.2:19090885-19090904 | None:intergenic | 50.0% | |
| GTAAGGTCTTCCAAACGGAG+TGG | - | chr1.2:19090330-19090349 | None:intergenic | 50.0% | |
| GTATGATACCACCGCCACTT+AGG | + | chr1.2:19095823-19095842 | MS.gene040816:intron | 50.0% | |
| TCAGATGGACAAGTGGGAGT+AGG | - | chr1.2:19095674-19095693 | None:intergenic | 50.0% | |
| TGGAAGCAAGAGATCACCAG+AGG | + | chr1.2:19091435-19091454 | MS.gene040816:CDS | 50.0% | |
| ! | ACCAAGAGTTGGTTCTTGGG+CGG | - | chr1.2:19094886-19094905 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1.2:19094785-19094804 | MS.gene040816:intron | 50.0% |
| ! | GCAGGCTGCTTTCTTAGACT+AGG | + | chr1.2:19090767-19090786 | MS.gene040816:intron | 50.0% |
| ! | GTGCATTGCAGCAGGTTTTG+TGG | + | chr1.2:19093314-19093333 | MS.gene040816:intron | 50.0% |
| ! | TGTTGATGGGGCATCTCATG+TGG | - | chr1.2:19092785-19092804 | None:intergenic | 50.0% |
| !! | CGTTTGGCCCGGCTTATTTT+AGG | + | chr1.2:19095849-19095868 | MS.gene040816:intron | 50.0% |
| !! | GTGGAGCATTGACCAAGAGT+TGG | - | chr1.2:19094897-19094916 | None:intergenic | 50.0% |
| !! | GTGTGATTTGGTGGTGGAAC+AGG | + | chr1.2:19096328-19096347 | MS.gene040816:intron | 50.0% |
| AAACGCTACCTAAGTGGCGG+TGG | - | chr1.2:19095834-19095853 | None:intergenic | 55.0% | |
| AAAGGGGCTTGGAGTAGACC+CGG | - | chr1.2:19090657-19090676 | None:intergenic | 55.0% | |
| ACCGCCACTTAGGTAGCGTT+TGG | + | chr1.2:19095833-19095852 | MS.gene040816:intron | 55.0% | |
| ACCGCCCAAGAACCAACTCT+TGG | + | chr1.2:19094882-19094901 | MS.gene040816:intron | 55.0% | |
| CACTTAGGTAGCGTTTGGCC+CGG | + | chr1.2:19095838-19095857 | MS.gene040816:intron | 55.0% | |
| CATGACTGGTGCATTGCAGC+AGG | + | chr1.2:19093306-19093325 | MS.gene040816:intron | 55.0% | |
| CTGCTGCAATGCACCAGTCA+TGG | - | chr1.2:19093308-19093327 | None:intergenic | 55.0% | |
| GAGCCATGTCAGCAAAGTGC+AGG | - | chr1.2:19095714-19095733 | None:intergenic | 55.0% | |
| GCCAAACGCTACCTAAGTGG+CGG | - | chr1.2:19095837-19095856 | None:intergenic | 55.0% | |
| GGCAAAGAGGAACCCACAGT+GGG | + | chr1.2:19094733-19094752 | MS.gene040816:intron | 55.0% | |
| TGGCAAAGAGGAACCCACAG+TGG | + | chr1.2:19094732-19094751 | MS.gene040816:intron | 55.0% | |
| ! | AGTAGGGAGTGTGTGAGGAG+AGG | - | chr1.2:19095657-19095676 | None:intergenic | 55.0% |
| ! | GTCGATGGGGCATCTCATGT+GGG | - | chr1.2:19092613-19092632 | None:intergenic | 55.0% |
| ! | TGTCGATGGGGCATCTCATG+TGG | - | chr1.2:19092614-19092633 | None:intergenic | 55.0% |
| AAGGGGCTTGGAGTAGACCC+GGG | - | chr1.2:19090656-19090675 | None:intergenic | 60.0% | |
| CGGGCCAAACGCTACCTAAG+TGG | - | chr1.2:19095840-19095859 | None:intergenic | 60.0% | |
| TGTGTGCGCAGTGCAGCAAG+TGG | + | chr1.2:19091415-19091434 | MS.gene040816:intron | 60.0% | |
| ! | GTGGGAGTAGGGAGTGTGTG+AGG | - | chr1.2:19095662-19095681 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 19090311 | 19096415 | 19090311 | ID=MS.gene040816 |
| chr1.2 | mRNA | 19090311 | 19096415 | 19090311 | ID=MS.gene040816.t1;Parent=MS.gene040816 |
| chr1.2 | exon | 19090311 | 19090373 | 19090311 | ID=MS.gene040816.t1.exon1;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19090311 | 19090373 | 19090311 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19090479 | 19090526 | 19090479 | ID=MS.gene040816.t1.exon2;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19090479 | 19090526 | 19090479 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19090641 | 19090736 | 19090641 | ID=MS.gene040816.t1.exon3;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19090641 | 19090736 | 19090641 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19090843 | 19090920 | 19090843 | ID=MS.gene040816.t1.exon4;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19090843 | 19090920 | 19090843 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19091174 | 19091346 | 19091174 | ID=MS.gene040816.t1.exon5;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19091174 | 19091346 | 19091174 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19091426 | 19091480 | 19091426 | ID=MS.gene040816.t1.exon6;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19091426 | 19091480 | 19091426 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19091671 | 19091719 | 19091671 | ID=MS.gene040816.t1.exon7;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19091671 | 19091719 | 19091671 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19091870 | 19091967 | 19091870 | ID=MS.gene040816.t1.exon8;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19091870 | 19091967 | 19091870 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19093215 | 19093292 | 19093215 | ID=MS.gene040816.t1.exon9;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19093215 | 19093292 | 19093215 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19094350 | 19094475 | 19094350 | ID=MS.gene040816.t1.exon10;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19094350 | 19094475 | 19094350 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| chr1.2 | exon | 19096350 | 19096415 | 19096350 | ID=MS.gene040816.t1.exon11;Parent=MS.gene040816.t1 |
| chr1.2 | CDS | 19096350 | 19096415 | 19096350 | ID=cds.MS.gene040816.t1;Parent=MS.gene040816.t1 |
| Gene Sequence |
| Protein sequence |
