AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene040831

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040831.t1 MTR_1g034240 95.111 450 5 1 1 450 1 433 0.0 885
MS.gene040831.t1 MTR_4g068320 60.927 453 147 7 3 450 2 429 0.0 545
MS.gene040831.t1 MTR_1g034210 55.830 446 94 9 1 420 1 369 1.45e-153 440
MS.gene040831.t1 MTR_1g034210 53.117 401 85 9 1 375 1 324 2.17e-126 369
MS.gene040831.t1 MTR_5g070440 49.495 99 50 0 7 105 21 119 8.69e-30 117
MS.gene040831.t1 MTR_3g005480 44.828 116 63 1 7 122 21 135 4.98e-29 115
MS.gene040831.t1 MTR_3g005480 32.895 152 70 5 267 410 134 261 1.50e-12 68.2
MS.gene040831.t1 MTR_3g005490 46.789 109 53 1 2 105 11 119 9.57e-29 114
MS.gene040831.t1 MTR_3g005420 45.455 99 54 0 7 105 289 387 4.90e-24 105
MS.gene040831.t1 MTR_3g005420 38.793 116 65 2 7 116 40 155 6.14e-21 95.9
MS.gene040831.t1 MTR_3g005420 30.822 146 73 4 268 409 415 536 1.27e-12 70.1
MS.gene040831.t1 MTR_3g005495 44.444 99 55 0 7 105 243 341 1.09e-23 103
MS.gene040831.t1 MTR_3g005495 44.681 94 51 1 22 115 28 120 2.16e-19 90.9
MS.gene040831.t1 MTR_3g005460 44.037 109 60 1 7 115 25 132 1.30e-23 103
MS.gene040831.t1 MTR_3g005460 46.000 100 53 1 7 105 262 361 1.80e-23 103
MS.gene040831.t1 MTR_7g050580 41.525 118 65 2 4 120 9 123 3.32e-22 97.1
MS.gene040831.t1 MTR_3g005440 44.444 99 55 0 7 105 242 340 5.30e-22 98.2
MS.gene040831.t1 MTR_3g005440 44.706 85 47 0 21 105 34 118 1.14e-19 91.3
MS.gene040831.t1 MTR_3g061290 36.170 141 80 2 7 147 12 142 5.54e-22 94.0
MS.gene040831.t1 MTR_7g050710 44.444 99 55 0 7 105 13 111 9.75e-22 95.9
MS.gene040831.t1 MTR_7g050560 42.424 99 57 0 7 105 13 111 1.12e-21 95.5
MS.gene040831.t1 MTR_3g061320 42.424 99 55 1 7 105 12 108 3.27e-21 93.6
MS.gene040831.t1 MTR_7g050720 42.857 105 60 0 3 107 6 110 4.00e-21 94.0
MS.gene040831.t1 MTR_3g005420 38.793 116 65 2 7 116 21 136 4.36e-21 95.9
MS.gene040831.t1 MTR_3g005420 43.662 71 40 0 7 77 270 340 1.30e-15 79.3
MS.gene040831.t1 MTR_3g005420 30.612 147 74 4 268 410 361 483 1.18e-12 70.1
MS.gene040831.t1 MTR_3g061340 37.500 112 67 2 7 117 12 121 7.52e-21 92.4
MS.gene040831.t1 MTR_3g061330 41.176 102 58 1 7 108 12 111 1.25e-20 91.3
MS.gene040831.t1 MTR_3g061310 38.596 114 66 2 1 114 8 117 4.44e-20 90.5
MS.gene040831.t1 MTR_3g098790 41.414 99 58 0 7 105 13 111 4.76e-20 91.3
MS.gene040831.t1 MTR_3g098790 26.126 222 124 7 209 409 97 299 1.90e-13 71.6
MS.gene040831.t1 MTR_7g050590 44.578 83 46 0 23 105 2 84 1.93e-19 89.0
MS.gene040831.t1 MTR_8g103940 41.000 100 59 0 7 106 39 138 1.96e-19 90.9
MS.gene040831.t1 MTR_8g103940 27.586 174 98 5 243 415 191 337 4.62e-14 74.3
MS.gene040831.t1 MTR_5g044670 39.604 101 61 0 7 107 16 116 6.24e-19 87.8
MS.gene040831.t1 MTR_1g035460 36.585 123 65 2 23 142 2 114 9.40e-19 88.2
MS.gene040831.t1 MTR_1g035460 30.935 139 71 3 287 425 187 300 1.54e-14 75.5
MS.gene040831.t1 MTR_3g061350 37.963 108 65 1 7 114 12 117 3.88e-18 84.7
MS.gene040831.t1 MTR_1g021270 23.002 413 243 13 4 413 13 353 4.96e-17 84.0
MS.gene040831.t1 MTR_3g061370 35.185 108 68 1 7 114 9 114 6.97e-17 81.3
MS.gene040831.t1 MTR_7g050640 39.785 93 56 0 7 99 13 105 1.45e-16 75.9
MS.gene040831.t1 MTR_1g021330 22.194 392 229 10 19 406 38 357 5.19e-15 76.6
MS.gene040831.t1 MTR_3g061220 33.945 109 57 2 7 115 12 105 2.34e-14 69.7
MS.gene040831.t1 MTR_1g108780 36.364 121 62 3 22 142 12 117 2.51e-14 75.1
MS.gene040831.t1 MTR_1g108780 31.507 146 73 5 274 417 178 298 4.15e-13 71.2
MS.gene040831.t1 MTR_1g021400 44.304 79 44 0 19 97 42 120 1.29e-12 69.3
MS.gene040831.t1 MTR_1g021350 39.773 88 53 0 10 97 24 111 2.86e-12 68.2
MS.gene040831.t1 MTR_1g021440 38.462 91 55 1 7 97 23 112 7.12e-12 66.6
MS.gene040831.t1 MTR_1g021440 38.462 91 55 1 7 97 23 112 8.23e-12 66.2
MS.gene040831.t1 MTR_1g021320 37.931 87 53 1 11 97 187 272 1.27e-11 67.4
MS.gene040831.t1 MTR_1g021440 41.772 79 46 0 19 97 34 112 1.86e-11 65.9
MS.gene040831.t1 MTR_1g021360 39.560 91 54 1 7 97 26 115 2.03e-11 66.2
MS.gene040831.t1 MTR_1g021360 40.506 79 47 0 19 97 194 272 4.27e-11 65.1
MS.gene040831.t1 MTR_1g021440 41.772 79 46 0 19 97 34 112 2.14e-11 65.9
MS.gene040831.t1 MTR_1g035570 33.333 111 67 3 5 115 7 110 3.09e-11 65.5
MS.gene040831.t1 MTR_1g021410 41.772 79 46 0 19 97 34 112 5.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene040831.t1 AT3G18990 49.392 411 134 8 3 412 2 339 2.00e-126 370
MS.gene040831.t1 AT3G18990 49.148 411 135 8 3 412 2 339 6.11e-125 367
MS.gene040831.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene040831.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene040831.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene040831.t1 AT4G01580 42.718 103 59 0 3 105 26 128 5.36e-24 99.4
MS.gene040831.t1 AT3G18960 40.777 103 61 0 3 105 26 128 9.46e-23 95.9
MS.gene040831.t1 AT3G18960 40.777 103 61 0 3 105 26 128 1.19e-22 95.9
MS.gene040831.t1 AT1G49475 35.849 106 64 2 3 105 27 131 7.64e-17 79.0
MS.gene040831.t1 AT3G18960 40.000 90 54 0 16 105 2 91 1.38e-16 77.8

Find 104 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATTAGAGAACAATTT+AGG 0.133108 1.2:+18788129 MS.gene040831:CDS
AAGAATTTGAACGGTGTTTC+AGG 0.187714 1.2:+18788012 MS.gene040831:CDS
AAAAGGTTGACAACCGAATT+TGG 0.209979 1.2:+18786842 MS.gene040831:CDS
TCATTGCAGAATTTGTTTAA+TGG 0.251640 1.2:+18787189 MS.gene040831:CDS
CTAAACTCAACCACGTTAAC+TGG 0.274983 1.2:+18787217 MS.gene040831:CDS
CATTGCAGAATTTGTTTAAT+GGG 0.276665 1.2:+18787190 MS.gene040831:CDS
TTATTAACCCCTTCCTCATT+AGG 0.282526 1.2:-18787357 None:intergenic
TATCGACTCCTTTGAATTCC+TGG 0.294296 1.2:+18787071 MS.gene040831:CDS
TATTTCCTAAGAAAATTATC+TGG 0.317191 1.2:-18786751 None:intergenic
TTACATTAGAGAACAATTTA+GGG 0.336001 1.2:+18788130 MS.gene040831:CDS
CAAAGCAGGAAGGCAAATAC+TGG 0.378699 1.2:-18787984 None:intergenic
ATCCTTGGCTTAACTTTGCT+CGG 0.390374 1.2:-18788098 None:intergenic
CGTGTAAAAGAGGACGAGTC+AGG 0.395227 1.2:+18788219 MS.gene040831:CDS
TTACCAATTGTCTAGTTTGA+AGG 0.397207 1.2:-18784997 None:intergenic
ATCCCTTCAAACTAGACAAT+TGG 0.398966 1.2:+18784994 MS.gene040831:CDS
TTGCTCGGCCTCCTTTATAT+AGG 0.399413 1.2:-18788083 None:intergenic
TTTATATAGAGGATGTATAA+TGG 0.403472 1.2:+18787875 MS.gene040831:CDS
CTGGCGTCTAGGATTGAAAA+AGG 0.407049 1.2:+18786825 MS.gene040831:CDS
CGGCCCTCTTATTTATATAG+AGG 0.407946 1.2:+18787864 MS.gene040831:CDS
TTTCTAGTATTCACTTATGA+AGG 0.411457 1.2:+18786919 MS.gene040831:CDS
ATTCAGTCAACCAGAGATAT+AGG 0.424869 1.2:+18787276 MS.gene040831:CDS
AGCCATCGACAAACCAAATT+CGG 0.433503 1.2:-18786855 None:intergenic
CTGTTCCTGATGGCACTGTC+TGG 0.439890 1.2:+18786806 MS.gene040831:CDS
CTTGCAATGCACCAGGAGTA+AGG 0.441488 1.2:-18787110 None:intergenic
GAATTTGGTTTGTCGATGGC+TGG 0.442071 1.2:+18786857 MS.gene040831:CDS
TATATCTCTGGTTGACTGAA+TGG 0.443124 1.2:-18787274 None:intergenic
TTAAACAAATTCTGCAATGA+TGG 0.444180 1.2:-18787186 None:intergenic
ACATCCTCTATATAAATAAG+AGG 0.453294 1.2:-18787868 None:intergenic
TTTGTTCAACGTTACTCCAT+TGG 0.453832 1.2:+18786886 MS.gene040831:CDS
CAACGTTACTCCATTGGCAT+TGG 0.459331 1.2:+18786892 MS.gene040831:CDS
ATGTAAATTCATACCATCCT+TGG 0.460863 1.2:-18788113 None:intergenic
GATGGCACTGTCTGGCGTCT+AGG 0.462195 1.2:+18786814 MS.gene040831:CDS
TGTCTAGTTTGAAGGGATGA+AGG 0.472503 1.2:-18784989 None:intergenic
CCTTTATATAGGCAGCGAAC+AGG 0.472865 1.2:-18788072 None:intergenic
ATTAAGCTTCAGATCTCTGA+TGG 0.476714 1.2:+18788039 MS.gene040831:CDS
TACTTTGTTTCGTGTAAAAG+AGG 0.477036 1.2:+18788209 MS.gene040831:CDS
AACCAGAGAGGTAGTGCTGC+AGG 0.477376 1.2:+18788185 MS.gene040831:CDS
CACGTTAACTGGGGAGATAT+CGG 0.483067 1.2:+18787228 MS.gene040831:CDS
GCACCAGGAGTAAGGTTTGA+AGG 0.495370 1.2:-18787102 None:intergenic
GGGTTGCAATAGTCGAAAGC+TGG 0.499258 1.2:-18786780 None:intergenic
CCCTTCAGTACGGCTTCTCA+TGG 0.501141 1.2:-18787004 None:intergenic
TAACAGCAGAAGAAAGAGAA+AGG 0.504497 1.2:+18787784 MS.gene040831:CDS
GAACTGAACACCTATATCTC+TGG 0.504709 1.2:-18787286 None:intergenic
AACCTGCAGCACTACCTCTC+TGG 0.506330 1.2:-18788187 None:intergenic
ACTCTACAGAATGGATTGGT+TGG 0.509007 1.2:-18787834 None:intergenic
TAAACTCAACCACGTTAACT+GGG 0.517161 1.2:+18787218 MS.gene040831:CDS
TACCAATTGTCTAGTTTGAA+GGG 0.519590 1.2:-18784996 None:intergenic
CCTGTTCGCTGCCTATATAA+AGG 0.526982 1.2:+18788072 MS.gene040831:CDS
TCACCTTCAAACCTTACTCC+TGG 0.530653 1.2:+18787099 MS.gene040831:CDS
CATAGCAAGGCCCTTCAGTA+CGG 0.538460 1.2:-18787014 None:intergenic
AGACGCCAGACAGTGCCATC+AGG 0.540335 1.2:-18786811 None:intergenic
AACAGCAGAAGAAAGAGAAA+GGG 0.540440 1.2:+18787785 MS.gene040831:CDS
GTCTAGTTTGAAGGGATGAA+GGG 0.543517 1.2:-18784988 None:intergenic
GGTTTGAAGGTGATGAATCC+AGG 0.544026 1.2:-18787089 None:intergenic
GGATGATAATTTGCATAGCA+AGG 0.545527 1.2:-18787027 None:intergenic
AGAATGAGCTTGTGAAAAGA+AGG 0.547922 1.2:-18784965 None:intergenic
ATTGCAGAATTTGTTTAATG+GGG 0.548631 1.2:+18787191 MS.gene040831:CDS
TCCTGGTGCATTGCAAGACA+AGG 0.548892 1.2:+18787116 MS.gene040831:CDS
ACCTTGTCTTGCAATGCACC+AGG 0.549286 1.2:-18787117 None:intergenic
TTGTGTAACTGTAGGTGCAC+TGG 0.551946 1.2:+18787686 MS.gene040831:intron
GCCATGAGAAGCCGTACTGA+AGG 0.554864 1.2:+18787003 MS.gene040831:CDS
CTGACACGGTGCTGCAAGTG+AGG 0.554904 1.2:-18788300 None:intergenic
TTGCGCTATCCTAATGAGGA+AGG 0.562431 1.2:+18787348 MS.gene040831:CDS
TATATAAATAAGAGGGCCGC+AGG 0.564081 1.2:-18787860 None:intergenic
CTGATTTGGTTGAGCTGACA+CGG 0.566401 1.2:-18788314 None:intergenic
TTAGAGAACAATTTAGGGGA+AGG 0.568521 1.2:+18788135 MS.gene040831:CDS
GGCCGAGCAAAGTTAAGCCA+AGG 0.570951 1.2:+18788096 MS.gene040831:CDS
CATCCTCTATATAAATAAGA+GGG 0.573160 1.2:-18787867 None:intergenic
AACCGAATTTGGTTTGTCGA+TGG 0.576855 1.2:+18786853 MS.gene040831:CDS
TGCAGAATTTGTTTAATGGG+GGG 0.577486 1.2:+18787193 MS.gene040831:CDS
TTGCAGAATTTGTTTAATGG+GGG 0.578544 1.2:+18787192 MS.gene040831:CDS
TGCGCTATCCTAATGAGGAA+GGG 0.580496 1.2:+18787349 MS.gene040831:CDS
GAAATTGCGCTATCCTAATG+AGG 0.581484 1.2:+18787344 MS.gene040831:CDS
TTTGCAGAAAAGAATTTGAA+CGG 0.582980 1.2:+18788003 MS.gene040831:CDS
GGTTGCAATAGTCGAAAGCT+GGG 0.584695 1.2:-18786779 None:intergenic
TGATGAATCCAGGAATTCAA+AGG 0.585718 1.2:-18787079 None:intergenic
GCGCTATCCTAATGAGGAAG+GGG 0.586754 1.2:+18787350 MS.gene040831:CDS
GACAACTCTACAGAATGGAT+TGG 0.593488 1.2:-18787838 None:intergenic
TTTGGCTTGGCTGTGAAGAA+GGG 0.594915 1.2:-18788251 None:intergenic
CGATATCTCCCCAGTTAACG+TGG 0.595115 1.2:-18787227 None:intergenic
TAGAAAGTATCCAATGCCAA+TGG 0.595339 1.2:-18786902 None:intergenic
CACTGCTGAAAATGATGAGG+AGG 0.595680 1.2:+18787713 MS.gene040831:CDS
CGCAGGACAACTCTACAGAA+TGG 0.599765 1.2:-18787843 None:intergenic
GCAACCCTCACTGTTCCTGA+TGG 0.602871 1.2:+18786796 MS.gene040831:CDS
TTAAGCTTCAGATCTCTGAT+GGG 0.604595 1.2:+18788040 MS.gene040831:CDS
AGAAAACTTCAAGAAAGAAG+CGG 0.610439 1.2:+18787391 MS.gene040831:CDS
GCGCAATTTCAATCCTTCAG+TGG 0.610517 1.2:-18787331 None:intergenic
GATGGAGTATGATTCTTCGC+TGG 0.611475 1.2:-18787168 None:intergenic
CCATGAGAAGCCGTACTGAA+GGG 0.612450 1.2:+18787004 MS.gene040831:CDS
AGATCTCTGATGGGAGACAG+TGG 0.629937 1.2:+18788049 MS.gene040831:CDS
TACATTAGAGAACAATTTAG+GGG 0.630150 1.2:+18788131 MS.gene040831:CDS
GTGTAAAAGAGGACGAGTCA+GGG 0.630504 1.2:+18788220 MS.gene040831:CDS
GAGCAAAGTTAAGCCAAGGA+TGG 0.643193 1.2:+18788100 MS.gene040831:CDS
TGACACGGTGCTGCAAGTGA+GGG 0.655075 1.2:-18788299 None:intergenic
GTTCGCTGCCTATATAAAGG+AGG 0.657822 1.2:+18788075 MS.gene040831:CDS
AGTGCCATCAGGAACAGTGA+GGG 0.674235 1.2:-18786800 None:intergenic
TGAGCTGCTTAGAACCAGAG+AGG 0.682743 1.2:+18788173 MS.gene040831:CDS
AGCCACTGCTGAAAATGATG+AGG 0.685162 1.2:+18787710 MS.gene040831:CDS
CAGTGCCATCAGGAACAGTG+AGG 0.694859 1.2:-18786801 None:intergenic
TTGTGAAAAGAAGGACGAGG+AGG 0.697547 1.2:-18784956 None:intergenic
AGCTTGTGAAAAGAAGGACG+AGG 0.710821 1.2:-18784959 None:intergenic
AAACTCAACCACGTTAACTG+GGG 0.714026 1.2:+18787219 MS.gene040831:CDS
CATTCTGTAGAGTTGTCCTG+CGG 0.717327 1.2:+18787844 MS.gene040831:CDS
GTTAACTGGGGAGATATCGG+TGG 0.726802 1.2:+18787231 MS.gene040831:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTAAATAAAT+TGG - chr1.2:18786482-18786501 None:intergenic 0.0%
!! AATCCAAACTTTATAAAAAA+AGG - chr1.2:18785186-18785205 None:intergenic 15.0%
!! ATCCAAACTTTATAAAAAAA+GGG - chr1.2:18785185-18785204 None:intergenic 15.0%
!! CTTAAAATCATTAATATATG+TGG + chr1.2:18785540-18785559 MS.gene040831:intron 15.0%
!!! ATAATTTTCTTAGGAAATAT+GGG + chr1.2:18786755-18786774 MS.gene040831:CDS 15.0%
!!! CACATATATTAATGATTTTA+AGG - chr1.2:18785542-18785561 None:intergenic 15.0%
!!! CATTGATTTTTTTTTGAATT+GGG + chr1.2:18785039-18785058 MS.gene040831:intron 15.0%
!!! CTTTTTAATTTTGGTAAAAA+AGG + chr1.2:18786110-18786129 MS.gene040831:intron 15.0%
!!! TATAAAGTTTGGATTTTTTT+AGG + chr1.2:18785191-18785210 MS.gene040831:intron 15.0%
!!! TATGAATTTAAGTTTACATA+AGG + chr1.2:18786546-18786565 MS.gene040831:intron 15.0%
!!! TCATTGATTTTTTTTTGAAT+TGG + chr1.2:18785038-18785057 MS.gene040831:intron 15.0%
!!! TCTTTTGATCTTTTTAATTT+TGG + chr1.2:18786101-18786120 MS.gene040831:intron 15.0%
!! TATTTCCTAAGAAAATTATC+TGG - chr1.2:18786754-18786773 None:intergenic 20.0%
!! TCCAAACTTTATAAAAAAAG+GGG - chr1.2:18785184-18785203 None:intergenic 20.0%
!! TTACATTAGAGAACAATTTA+GGG + chr1.2:18788130-18788149 MS.gene040831:CDS 20.0%
!! TTATGAGCATTACTAATATT+TGG + chr1.2:18786696-18786715 MS.gene040831:intron 20.0%
!! TTATGATTGTTGTAAGAAAA+GGG + chr1.2:18785098-18785117 MS.gene040831:intron 20.0%
!! TTTAATTGAGACTATCATAT+TGG + chr1.2:18785696-18785715 MS.gene040831:intron 20.0%
!! TTTACATTAGAGAACAATTT+AGG + chr1.2:18788129-18788148 MS.gene040831:CDS 20.0%
!! TTTATATAGAGGATGTATAA+TGG + chr1.2:18787875-18787894 MS.gene040831:CDS 20.0%
!!! AAGCATAAAAGTATTTTTGT+TGG - chr1.2:18786527-18786546 None:intergenic 20.0%
!!! AATTTAATTTGTGTAACTGT+AGG + chr1.2:18787678-18787697 MS.gene040831:intron 20.0%
!!! GATAATTTTCTTAGGAAATA+TGG + chr1.2:18786754-18786773 MS.gene040831:CDS 20.0%
!!! TAATTTTCTTAGGAAATATG+GGG + chr1.2:18786756-18786775 MS.gene040831:CDS 20.0%
! AAAAACTACTCATTTCCAAA+TGG - chr1.2:18786221-18786240 None:intergenic 25.0%
! AAAACCTCTTCTATTAAGTA+TGG + chr1.2:18786170-18786189 MS.gene040831:intron 25.0%
! AAAAGATCAAAAGAAGTTCA+AGG - chr1.2:18786095-18786114 None:intergenic 25.0%
! ACATCCTCTATATAAATAAG+AGG - chr1.2:18787871-18787890 None:intergenic 25.0%
! AGACAATGAAATCATAAACA+TGG - chr1.2:18786630-18786649 None:intergenic 25.0%
! AGTCTCAATTAAAACACATT+TGG - chr1.2:18785689-18785708 None:intergenic 25.0%
! ATAAACATGGAATCATAACA+CGG - chr1.2:18786617-18786636 None:intergenic 25.0%
! ATTAACTACCATGCTAAAAA+CGG - chr1.2:18786257-18786276 None:intergenic 25.0%
! CATCCTCTATATAAATAAGA+GGG - chr1.2:18787870-18787889 None:intergenic 25.0%
! GTTATGATTGTTGTAAGAAA+AGG + chr1.2:18785097-18785116 MS.gene040831:intron 25.0%
! TACATTAGAGAACAATTTAG+GGG + chr1.2:18788131-18788150 MS.gene040831:CDS 25.0%
! TCTTCAATGTCTTCAAAAAT+AGG - chr1.2:18787051-18787070 None:intergenic 25.0%
! TTAAACAAATTCTGCAATGA+TGG - chr1.2:18787189-18787208 None:intergenic 25.0%
! TTCTATTAAGTATGGAAAGT+TGG + chr1.2:18786178-18786197 MS.gene040831:intron 25.0%
! TTTGCAGAAAAGAATTTGAA+CGG + chr1.2:18788003-18788022 MS.gene040831:CDS 25.0%
!! AACCAACCAATTCAATTTTA+GGG - chr1.2:18785410-18785429 None:intergenic 25.0%
!! ATTGCAGAATTTGTTTAATG+GGG + chr1.2:18787191-18787210 MS.gene040831:CDS 25.0%
!! CATTGCAGAATTTGTTTAAT+GGG + chr1.2:18787190-18787209 MS.gene040831:CDS 25.0%
!! TAACCAACCAATTCAATTTT+AGG - chr1.2:18785411-18785430 None:intergenic 25.0%
!! TCATTGCAGAATTTGTTTAA+TGG + chr1.2:18787189-18787208 MS.gene040831:CDS 25.0%
!! TTGTAAGAAAAGGGTTTTTA+GGG + chr1.2:18785107-18785126 MS.gene040831:intron 25.0%
!! TTTCTAGTATTCACTTATGA+AGG + chr1.2:18786919-18786938 MS.gene040831:CDS 25.0%
!! TTTTAGCCCTAAAATTGAAT+TGG + chr1.2:18785401-18785420 MS.gene040831:intron 25.0%
!!! AATGTTATTTTCAATTGCAG+AGG + chr1.2:18786725-18786744 MS.gene040831:intron 25.0%
!!! ACCCCTTTTTTTATAAAGTT+TGG + chr1.2:18785180-18785199 MS.gene040831:intron 25.0%
!!! TGTTGAAATTTTGATAAACC+TGG + chr1.2:18785366-18785385 MS.gene040831:intron 25.0%
!!! TTATAAAAAAAGGGGTATCA+GGG - chr1.2:18785176-18785195 None:intergenic 25.0%
!!! TTGTGTTTCATGTTTTTGAT+TGG + chr1.2:18785063-18785082 MS.gene040831:intron 25.0%
!!! TTTAGGTTTTGTGATTTTTC+TGG + chr1.2:18785339-18785358 MS.gene040831:intron 25.0%
!!! TTTATAAAAAAAGGGGTATC+AGG - chr1.2:18785177-18785196 None:intergenic 25.0%
AAAAGAAGTTCAAGGATTTG+GGG - chr1.2:18786087-18786106 None:intergenic 30.0%
AAACTCAGTGATCAAAATCA+TGG - chr1.2:18785230-18785249 None:intergenic 30.0%
AACTCAGTGATCAAAATCAT+GGG - chr1.2:18785229-18785248 None:intergenic 30.0%
AGAAAACTTCAAGAAAGAAG+CGG + chr1.2:18787391-18787410 MS.gene040831:CDS 30.0%
ATGTAAATTCATACCATCCT+TGG - chr1.2:18788116-18788135 None:intergenic 30.0%
CAAAAGAAGTTCAAGGATTT+GGG - chr1.2:18786088-18786107 None:intergenic 30.0%
CTGTTATGATTCTTGATGAA+GGG + chr1.2:18785257-18785276 MS.gene040831:intron 30.0%
CTTATCTAAAAGAGCTTACT+TGG - chr1.2:18787426-18787445 None:intergenic 30.0%
CTTTCCATACTTAATAGAAG+AGG - chr1.2:18786177-18786196 None:intergenic 30.0%
TCAAAAGAAGTTCAAGGATT+TGG - chr1.2:18786089-18786108 None:intergenic 30.0%
TCTGTTATGATTCTTGATGA+AGG + chr1.2:18785256-18785275 MS.gene040831:intron 30.0%
TCTTCTCTTTCACTTAAAAC+AGG - chr1.2:18785625-18785644 None:intergenic 30.0%
TTTAAACTCGAGATTTGACT+CGG - chr1.2:18786661-18786680 None:intergenic 30.0%
TTTAACTACCATGCTGAAAA+TGG - chr1.2:18785842-18785861 None:intergenic 30.0%
! ATTTTCAGTCACTCATTCAA+AGG - chr1.2:18785993-18786012 None:intergenic 30.0%
! GGATTCCAGATAATTTTCTT+AGG + chr1.2:18786746-18786765 MS.gene040831:CDS 30.0%
! GGTTTTTCATTTGCATATCT+AGG - chr1.2:18786156-18786175 None:intergenic 30.0%
! GTTGTAAGAAAAGGGTTTTT+AGG + chr1.2:18785106-18785125 MS.gene040831:intron 30.0%
! TACCAATTGTCTAGTTTGAA+GGG - chr1.2:18784999-18785018 None:intergenic 30.0%
! TACTTTGTTTCGTGTAAAAG+AGG + chr1.2:18788209-18788228 MS.gene040831:CDS 30.0%
! TTACCAATTGTCTAGTTTGA+AGG - chr1.2:18785000-18785019 None:intergenic 30.0%
! TTGCAGAATTTGTTTAATGG+GGG + chr1.2:18787192-18787211 MS.gene040831:CDS 30.0%
! TTTTTAACAGGTCATGTACT+CGG - chr1.2:18786367-18786386 None:intergenic 30.0%
!! ATGATTTTGATCACTGAGTT+TGG + chr1.2:18785229-18785248 MS.gene040831:intron 30.0%
!! TGATTTTAAGGAAAACATCG+AGG - chr1.2:18785530-18785549 None:intergenic 30.0%
!! TGTTTGATTCAGTGTTGTTT+AGG + chr1.2:18785322-18785341 MS.gene040831:intron 30.0%
!!! AAAGGTGCGTTTTTTTTAAC+AGG - chr1.2:18786379-18786398 None:intergenic 30.0%
!!! AGGGTTTTGGTTGATTTTTT+AGG + chr1.2:18785126-18785145 MS.gene040831:intron 30.0%
!!! GGGTTTTGGTTGATTTTTTA+GGG + chr1.2:18785127-18785146 MS.gene040831:intron 30.0%
AAAAGGTTGACAACCGAATT+TGG + chr1.2:18786842-18786861 MS.gene040831:CDS 35.0%
AACAGCAGAAGAAAGAGAAA+GGG + chr1.2:18787785-18787804 MS.gene040831:CDS 35.0%
AAGAATTTGAACGGTGTTTC+AGG + chr1.2:18788012-18788031 MS.gene040831:CDS 35.0%
ACACATTTCCAAATTGCTAC+TGG - chr1.2:18785802-18785821 None:intergenic 35.0%
AGAATGAGCTTGTGAAAAGA+AGG - chr1.2:18784968-18784987 None:intergenic 35.0%
AGCCCTAAAATTGAATTGGT+TGG + chr1.2:18785405-18785424 MS.gene040831:intron 35.0%
ATCCCTTCAAACTAGACAAT+TGG + chr1.2:18784994-18785013 MS.gene040831:CDS 35.0%
ATTAAGCTTCAGATCTCTGA+TGG + chr1.2:18788039-18788058 MS.gene040831:CDS 35.0%
ATTCAGTCAACCAGAGATAT+AGG + chr1.2:18787276-18787295 MS.gene040831:CDS 35.0%
CACTTAGTAAGTATGACCTT+TGG + chr1.2:18785766-18785785 MS.gene040831:intron 35.0%
GAAATGTCGAAGAAGACTAA+AGG - chr1.2:18787933-18787952 None:intergenic 35.0%
GAGTTTAAAAAGTCCACTGA+AGG + chr1.2:18787318-18787337 MS.gene040831:CDS 35.0%
TAAACTCAACCACGTTAACT+GGG + chr1.2:18787218-18787237 MS.gene040831:CDS 35.0%
TAACAGCAGAAGAAAGAGAA+AGG + chr1.2:18787784-18787803 MS.gene040831:CDS 35.0%
TACTGGCAATAACAATCCAA+AGG - chr1.2:18785785-18785804 None:intergenic 35.0%
TATATCTCTGGTTGACTGAA+TGG - chr1.2:18787277-18787296 None:intergenic 35.0%
TGATGAATCCAGGAATTCAA+AGG - chr1.2:18787082-18787101 None:intergenic 35.0%
TGTTATTGCCAGTAGCAATT+TGG + chr1.2:18785791-18785810 MS.gene040831:intron 35.0%
TTAAGCTTCAGATCTCTGAT+GGG + chr1.2:18788040-18788059 MS.gene040831:CDS 35.0%
TTAGAGAACAATTTAGGGGA+AGG + chr1.2:18788135-18788154 MS.gene040831:CDS 35.0%
TTATTAACCCCTTCCTCATT+AGG - chr1.2:18787360-18787379 None:intergenic 35.0%
TTGCATATCTAGGAAGTTTG+AGG - chr1.2:18786146-18786165 None:intergenic 35.0%
TTTGTTCAACGTTACTCCAT+TGG + chr1.2:18786886-18786905 MS.gene040831:CDS 35.0%
! AAACCTTTTCTCACCAGAAA+AGG + chr1.2:18786059-18786078 MS.gene040831:intron 35.0%
! ATGAATCTCCATTTTCAGCA+TGG + chr1.2:18785831-18785850 MS.gene040831:intron 35.0%
! CAAATTCTTTTCTGCAAAGC+AGG - chr1.2:18788001-18788020 None:intergenic 35.0%
! GGATGATAATTTGCATAGCA+AGG - chr1.2:18787030-18787049 None:intergenic 35.0%
! GGTTTTACATTTGCAGATCT+AGG - chr1.2:18786026-18786045 None:intergenic 35.0%
! TGCAGAATTTGTTTAATGGG+GGG + chr1.2:18787193-18787212 MS.gene040831:CDS 35.0%
! TTTTTGCATGGCTCACATTT+TGG - chr1.2:18788272-18788291 None:intergenic 35.0%
!! AAATTGGTTCGACCTAAGTA+TGG - chr1.2:18786466-18786485 None:intergenic 35.0%
!! AATTGGTTCGACCTAAGTAT+GGG - chr1.2:18786465-18786484 None:intergenic 35.0%
!! GCACTGACATTTTAGATCAA+AGG + chr1.2:18787475-18787494 MS.gene040831:intron 35.0%
!! GTTAGTTTGTTTGTGTCTTG+TGG + chr1.2:18785427-18785446 MS.gene040831:intron 35.0%
!! TAGAAAGTATCCAATGCCAA+TGG - chr1.2:18786905-18786924 None:intergenic 35.0%
!! TTGCAAGACAAGGTTTTTAG+TGG + chr1.2:18787126-18787145 MS.gene040831:CDS 35.0%
!!! ATGAATCTCCGTTTTTAGCA+TGG + chr1.2:18786246-18786265 MS.gene040831:intron 35.0%
!!! CAAGGTTTTTAGTGGATCTT+TGG + chr1.2:18787134-18787153 MS.gene040831:CDS 35.0%
!!! GAAAAGGGTTTTTAGGGTTT+TGG + chr1.2:18785113-18785132 MS.gene040831:intron 35.0%
!!! GGTTGATTTTTTAGGGTATG+TGG + chr1.2:18785134-18785153 MS.gene040831:intron 35.0%
!!! TCACCTTTTGAAATGATGAC+CGG + chr1.2:18787573-18787592 MS.gene040831:intron 35.0%
AAACTCAACCACGTTAACTG+GGG + chr1.2:18787219-18787238 MS.gene040831:CDS 40.0%
AAATTAACACACACGACCAC+AGG - chr1.2:18785957-18785976 None:intergenic 40.0%
AATGATGTGTGTCAGACACT+CGG - chr1.2:18787506-18787525 None:intergenic 40.0%
ACACCGGTCATCATTTCAAA+AGG - chr1.2:18787579-18787598 None:intergenic 40.0%
AGCCATCGACAAACCAAATT+CGG - chr1.2:18786858-18786877 None:intergenic 40.0%
ATATCGCACCTAATCACTGA+TGG + chr1.2:18786335-18786354 MS.gene040831:intron 40.0%
ATCCTTGGCTTAACTTTGCT+CGG - chr1.2:18788101-18788120 None:intergenic 40.0%
ATCTCAAACCTAATCGCAGA+TGG + chr1.2:18785925-18785944 MS.gene040831:intron 40.0%
CAAGGAAGTTTGAGGATTCT+CGG - chr1.2:18786412-18786431 None:intergenic 40.0%
CTAAAATCAACTCAGCAACC+AGG - chr1.2:18785387-18785406 None:intergenic 40.0%
CTAAACTCAACCACGTTAAC+TGG + chr1.2:18787217-18787236 MS.gene040831:CDS 40.0%
CTAGGAAGTTTGAGGATTTG+CGG - chr1.2:18786138-18786157 None:intergenic 40.0%
GAAATTGCGCTATCCTAATG+AGG + chr1.2:18787344-18787363 MS.gene040831:CDS 40.0%
GAACTGAACACCTATATCTC+TGG - chr1.2:18787289-18787308 None:intergenic 40.0%
GACAACTCTACAGAATGGAT+TGG - chr1.2:18787841-18787860 None:intergenic 40.0%
GGCAAAAACCATCAGTGATT+AGG - chr1.2:18786346-18786365 None:intergenic 40.0%
TATATAAATAAGAGGGCCGC+AGG - chr1.2:18787863-18787882 None:intergenic 40.0%
TGGTCGTGTGTGTTAATTTC+AGG + chr1.2:18785958-18785977 MS.gene040831:intron 40.0%
! CGGCCCTCTTATTTATATAG+AGG + chr1.2:18787864-18787883 MS.gene040831:CDS 40.0%
! GAAAGTTGGATTGCTATTGC+TGG + chr1.2:18786192-18786211 MS.gene040831:intron 40.0%
! GAGGGTTCAACATTTTTGCA+TGG - chr1.2:18788284-18788303 None:intergenic 40.0%
! GTCTAGTTTGAAGGGATGAA+GGG - chr1.2:18784991-18785010 None:intergenic 40.0%
! TCTGGTGAGAAAAGGTTTTC+TGG - chr1.2:18786057-18786076 None:intergenic 40.0%
! TGTCTAGTTTGAAGGGATGA+AGG - chr1.2:18784992-18785011 None:intergenic 40.0%
! TTCTTTTCTGCAAAGCAGGA+AGG - chr1.2:18787997-18788016 None:intergenic 40.0%
!! AAAGGTTTTCTGGTGAGAAG+AGG - chr1.2:18786047-18786066 None:intergenic 40.0%
!! AACCGAATTTGGTTTGTCGA+TGG + chr1.2:18786853-18786872 MS.gene040831:CDS 40.0%
!! ACTCTACAGAATGGATTGGT+TGG - chr1.2:18787837-18787856 None:intergenic 40.0%
!! TATCGACTCCTTTGAATTCC+TGG + chr1.2:18787071-18787090 MS.gene040831:CDS 40.0%
AGCCACTGCTGAAAATGATG+AGG + chr1.2:18787710-18787729 MS.gene040831:CDS 45.0%
AGCTTGTGAAAAGAAGGACG+AGG - chr1.2:18784962-18784981 None:intergenic 45.0%
ATGATGTGTGTCAGACACTC+GGG - chr1.2:18787505-18787524 None:intergenic 45.0%
ATTCTCGGTCACACGTTCAA+AGG - chr1.2:18786397-18786416 None:intergenic 45.0%
CAAAGCAGGAAGGCAAATAC+TGG - chr1.2:18787987-18788006 None:intergenic 45.0%
CAACGTTACTCCATTGGCAT+TGG + chr1.2:18786892-18786911 MS.gene040831:CDS 45.0%
CACGTTAACTGGGGAGATAT+CGG + chr1.2:18787228-18787247 MS.gene040831:CDS 45.0%
CACTGCTGAAAATGATGAGG+AGG + chr1.2:18787713-18787732 MS.gene040831:CDS 45.0%
CATTCTGTAGAGTTGTCCTG+CGG + chr1.2:18787844-18787863 MS.gene040831:CDS 45.0%
CCTGTTCGCTGCCTATATAA+AGG + chr1.2:18788072-18788091 MS.gene040831:CDS 45.0%
CCTTTATATAGGCAGCGAAC+AGG - chr1.2:18788075-18788094 None:intergenic 45.0%
CGAGAATCCTCAAACTTCCT+TGG + chr1.2:18786410-18786429 MS.gene040831:intron 45.0%
CTTTGAACGAGAAGTTCTCG+TGG + chr1.2:18785454-18785473 MS.gene040831:intron 45.0%
GAGCAAAGTTAAGCCAAGGA+TGG + chr1.2:18788100-18788119 MS.gene040831:CDS 45.0%
GATGGAGTATGATTCTTCGC+TGG - chr1.2:18787171-18787190 None:intergenic 45.0%
GCAAAGACCAAGGAAGTTTG+AGG - chr1.2:18786420-18786439 None:intergenic 45.0%
GCGCAATTTCAATCCTTCAG+TGG - chr1.2:18787334-18787353 None:intergenic 45.0%
GGCAAAAACCATCTGCGATT+AGG - chr1.2:18785936-18785955 None:intergenic 45.0%
GGTTGCAATAGTCGAAAGCT+GGG - chr1.2:18786782-18786801 None:intergenic 45.0%
GGTTTGAAGGTGATGAATCC+AGG - chr1.2:18787092-18787111 None:intergenic 45.0%
GTGTAAAAGAGGACGAGTCA+GGG + chr1.2:18788220-18788239 MS.gene040831:CDS 45.0%
GTTCGCTGCCTATATAAAGG+AGG + chr1.2:18788075-18788094 MS.gene040831:CDS 45.0%
TCACCTTCAAACCTTACTCC+TGG + chr1.2:18787099-18787118 MS.gene040831:CDS 45.0%
TGCGCTATCCTAATGAGGAA+GGG + chr1.2:18787349-18787368 MS.gene040831:CDS 45.0%
TGCTATTGCTGGTAGCCATT+TGG + chr1.2:18786203-18786222 MS.gene040831:intron 45.0%
TTGCAGATCTAGGAAGTTCG+AGG - chr1.2:18786016-18786035 None:intergenic 45.0%
TTGCGCTATCCTAATGAGGA+AGG + chr1.2:18787348-18787367 MS.gene040831:CDS 45.0%
TTGCTCGGCCTCCTTTATAT+AGG - chr1.2:18788086-18788105 None:intergenic 45.0%
TTGTGAAAAGAAGGACGAGG+AGG - chr1.2:18784959-18784978 None:intergenic 45.0%
TTGTGTAACTGTAGGTGCAC+TGG + chr1.2:18787686-18787705 MS.gene040831:intron 45.0%
! CACTCATTCAAAGGTGCGTT+CGG - chr1.2:18785984-18786003 None:intergenic 45.0%
! CTCCTCATCATTTTCAGCAG+TGG - chr1.2:18787715-18787734 None:intergenic 45.0%
! CTGGCGTCTAGGATTGAAAA+AGG + chr1.2:18786825-18786844 MS.gene040831:CDS 45.0%
!! CTGATTTGGTTGAGCTGACA+CGG - chr1.2:18788317-18788336 None:intergenic 45.0%
!! GAATTTGGTTTGTCGATGGC+TGG + chr1.2:18786857-18786876 MS.gene040831:CDS 45.0%
!! GCTCCTTTTCTGGTGAGAAA+AGG - chr1.2:18786065-18786084 None:intergenic 45.0%
!! TTTGGCTTGGCTGTGAAGAA+GGG - chr1.2:18788254-18788273 None:intergenic 45.0%
!!! TTTTGGCTTGGCTGTGAAGA+AGG - chr1.2:18788255-18788274 None:intergenic 45.0%
AACCACACGTGTCAGTGTAG+CGG - chr1.2:18787540-18787559 None:intergenic 50.0%
ACCTTGTCTTGCAATGCACC+AGG - chr1.2:18787120-18787139 None:intergenic 50.0%
AGATCTCTGATGGGAGACAG+TGG + chr1.2:18788049-18788068 MS.gene040831:CDS 50.0%
AGTGCCATCAGGAACAGTGA+GGG - chr1.2:18786803-18786822 None:intergenic 50.0%
AGTGTCGTGTCTTCCTGTGT+CGG + chr1.2:18787608-18787627 MS.gene040831:intron 50.0%
CATAGCAAGGCCCTTCAGTA+CGG - chr1.2:18787017-18787036 None:intergenic 50.0%
CCATGAGAAGCCGTACTGAA+GGG + chr1.2:18787004-18787023 MS.gene040831:CDS 50.0%
CGACACTGAGATGACAACAC+CGG - chr1.2:18787595-18787614 None:intergenic 50.0%
CGATATCTCCCCAGTTAACG+TGG - chr1.2:18787230-18787249 None:intergenic 50.0%
CGCAGGACAACTCTACAGAA+TGG - chr1.2:18787846-18787865 None:intergenic 50.0%
CGTGTAAAAGAGGACGAGTC+AGG + chr1.2:18788219-18788238 MS.gene040831:CDS 50.0%
CTACCAACGAGCAAAGACCA+AGG - chr1.2:18786430-18786449 None:intergenic 50.0%
CTTGCAATGCACCAGGAGTA+AGG - chr1.2:18787113-18787132 None:intergenic 50.0%
GCACCAGGAGTAAGGTTTGA+AGG - chr1.2:18787105-18787124 None:intergenic 50.0%
GCGCTATCCTAATGAGGAAG+GGG + chr1.2:18787350-18787369 MS.gene040831:CDS 50.0%
GGGTTGCAATAGTCGAAAGC+TGG - chr1.2:18786783-18786802 None:intergenic 50.0%
GTTAACTGGGGAGATATCGG+TGG + chr1.2:18787231-18787250 MS.gene040831:CDS 50.0%
TAGCCATGAAACACCGACAC+AGG - chr1.2:18787624-18787643 None:intergenic 50.0%
TCCTGGTGCATTGCAAGACA+AGG + chr1.2:18787116-18787135 MS.gene040831:CDS 50.0%
TGAGCTGCTTAGAACCAGAG+AGG + chr1.2:18788173-18788192 MS.gene040831:CDS 50.0%
! CTTCCTGTGTCGGTGTTTCA+TGG + chr1.2:18787618-18787637 MS.gene040831:intron 50.0%
! CTTCCTTGGTCTTTGCTCGT+TGG + chr1.2:18786424-18786443 MS.gene040831:intron 50.0%
! TCGCAGATGGTTTTTGCCTG+TGG + chr1.2:18785938-18785957 MS.gene040831:intron 50.0%
!! AGGATTTGGGGCTCCTTTTC+TGG - chr1.2:18786075-18786094 None:intergenic 50.0%
!! CTCGTTGGTAGTGCACCATT+GGG + chr1.2:18786439-18786458 MS.gene040831:intron 50.0%
!!! GCATGGCTCACATTTTGGCT+TGG - chr1.2:18788267-18788286 None:intergenic 50.0%
AACCAGAGAGGTAGTGCTGC+AGG + chr1.2:18788185-18788204 MS.gene040831:CDS 55.0%
AACCTGCAGCACTACCTCTC+TGG - chr1.2:18788190-18788209 None:intergenic 55.0%
CAGTGCCATCAGGAACAGTG+AGG - chr1.2:18786804-18786823 None:intergenic 55.0%
CCCTTCAGTACGGCTTCTCA+TGG - chr1.2:18787007-18787026 None:intergenic 55.0%
CGACCTAAGTATGGGCCCAA+TGG - chr1.2:18786457-18786476 None:intergenic 55.0%
CTGTTCCTGATGGCACTGTC+TGG + chr1.2:18786806-18786825 MS.gene040831:CDS 55.0%
GCAACCCTCACTGTTCCTGA+TGG + chr1.2:18786796-18786815 MS.gene040831:CDS 55.0%
GCACCATTGGGCCCATACTT+AGG + chr1.2:18786451-18786470 MS.gene040831:intron 55.0%
GCCATGAGAAGCCGTACTGA+AGG + chr1.2:18787003-18787022 MS.gene040831:CDS 55.0%
GGCCGAGCAAAGTTAAGCCA+AGG + chr1.2:18788096-18788115 MS.gene040831:CDS 55.0%
TGTCAGTGTAGCGGCAGAGT+AGG - chr1.2:18787531-18787550 None:intergenic 55.0%
!! GCTCGTTGGTAGTGCACCAT+TGG + chr1.2:18786438-18786457 MS.gene040831:intron 55.0%
!! TGACACGGTGCTGCAAGTGA+GGG - chr1.2:18788302-18788321 None:intergenic 55.0%
AGACGCCAGACAGTGCCATC+AGG - chr1.2:18786814-18786833 None:intergenic 60.0%
GATGGCACTGTCTGGCGTCT+AGG + chr1.2:18786814-18786833 MS.gene040831:CDS 60.0%
TGCCGCTACACTGACACGTG+TGG + chr1.2:18787535-18787554 MS.gene040831:intron 60.0%
!! CTGACACGGTGCTGCAAGTG+AGG - chr1.2:18788303-18788322 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 18784953 18788347 18784953 ID=MS.gene040831
chr1.2 mRNA 18784953 18788347 18784953 ID=MS.gene040831.t1;Parent=MS.gene040831
chr1.2 exon 18784953 18785015 18784953 ID=MS.gene040831.t1.exon1;Parent=MS.gene040831.t1
chr1.2 CDS 18784953 18785015 18784953 ID=cds.MS.gene040831.t1;Parent=MS.gene040831.t1
chr1.2 exon 18786745 18787426 18786745 ID=MS.gene040831.t1.exon2;Parent=MS.gene040831.t1
chr1.2 CDS 18786745 18787426 18786745 ID=cds.MS.gene040831.t1;Parent=MS.gene040831.t1
chr1.2 exon 18787700 18787896 18787700 ID=MS.gene040831.t1.exon3;Parent=MS.gene040831.t1
chr1.2 CDS 18787700 18787896 18787700 ID=cds.MS.gene040831.t1;Parent=MS.gene040831.t1
chr1.2 exon 18787937 18788347 18787937 ID=MS.gene040831.t1.exon4;Parent=MS.gene040831.t1
chr1.2 CDS 18787937 18788347 18787937 ID=cds.MS.gene040831.t1;Parent=MS.gene040831.t1
Gene Sequence

>MS.gene040831

ATGCCTCCTCGTCCTTCTTTTCACAAGCTCATTCTCCCTTCATCCCTTCAAACTAGACAATTGGTAACGAGTTTTCTCTTTTTACTCATTGATTTTTTTTTGAATTGGGTTTGTGTTTCATGTTTTTGATTGGATTTTATTGATGTTATGATTGTTGTAAGAAAAGGGTTTTTAGGGTTTTGGTTGATTTTTTAGGGTATGTGGCACTTTAACTTATAAACCCTGATACCCCTTTTTTTATAAAGTTTGGATTTTTTTAGGTTTTGTTTTAAACCCATGATTTTGATCACTGAGTTTGGATTTTCTGTTATGATTCTTGATGAAGGGTAGTGTTTTTTGTTTGATCAGTCATTGAAAAGTGTTGAAATTTGTTTGATTCAGTGTTGTTTAGGTTTTGTGATTTTTCTGGAAAGTGTTGAAATTTTGATAAACCTGGTTGCTGAGTTGATTTTAGCCCTAAAATTGAATTGGTTGGTTAGTTTGTTTGTGTCTTGTGGCATTCTTTGAACGAGAAGTTCTCGTGGTGTTGAAATTGAATTTGCTATCATATCGATTACTTGATAAAATTTATGCTCCTCGATGTTTTCCTTAAAATCATTAATATATGTGGTTCAGTGTATTAGAAAGAATTGATCTTTTTTTATTTTTTATTGAGAACTAGAAGTGTCACCTGTTTTAAGTGAAAGAGAAGAACATATAACAGAGTGAACAGATTTTTATGCTTCATATTTCTCCAAATGTGTTTTAATTGAGACTATCATATTGGAAATTTATCTATGTGTAGAAATTCTTTAGTGTAGTTACAAATTCTTGCACTTAGTAAGTATGACCTTTGGATTGTTATTGCCAGTAGCAATTTGGAAATGTGTCATTTTTTAATGAATCTCCATTTTCAGCATGGTAGTTAAATATCACATATTGACTTATTGAAATCATACAATTTTAAAATGTTTTGTGATCACTGCGATTCAGATCTCAAACCTAATCGCAGATGGTTTTTGCCTGTGGTCGTGTGTGTTAATTTCAGGCCGAACGCACCTTTGAATGAGTGACTGAAAATCCTCGAACTTCCTAGATCTGCAAATGTAAAACCTCTTCTCACCAGAAAACCTTTTCTCACCAGAAAAGGAGCCCCAAATCCTTGAACTTCTTTTGATCTTTTTAATTTTGGTAAAAAAGGAGCCGCAAATCCTCAAACTTCCTAGATATGCAAATGAAAAACCTCTTCTATTAAGTATGGAAAGTTGGATTGCTATTGCTGGTAGCCATTTGGAAATGAGTAGTTTTTTTTTAATGAATCTCCGTTTTTAGCATGGTAGTTAATATCACACATTGAATCATTTAATTCATACAGTTTTAAGATGTTTTGTGATCTCTGCGAGATATCGCACCTAATCACTGATGGTTTTTGCCGAGTACATGACCTGTTAAAAAAAACGCACCTTTGAACGTGTGACCGAGAATCCTCAAACTTCCTTGGTCTTTGCTCGTTGGTAGTGCACCATTGGGCCCATACTTAGGTCGAACCAATTTATTTAATAATAATAATCAAATAAAAATTCAAAAACGATCCAACAAAAATACTTTTATGCTTATGAATTTAAGTTTACATAAGGATTTGATGTGTTATTTAAATGCTCTCTTTGTGAATTATGTACTATCCGTGTTATGATTCCATGTTTATGATTTCATTGTCTTTTTGATTCCGAGTCAAATCTCGAGTTTAAAATCTTCAGTCATTTATTATGAGCATTACTAATATTTGGATGATCAATGTTATTTTCAATTGCAGAGGATTCCAGATAATTTTCTTAGGAAATATGGGGCCCAGCTTTCGACTATTGCAACCCTCACTGTTCCTGATGGCACTGTCTGGCGTCTAGGATTGAAAAAGGTTGACAACCGAATTTGGTTTGTCGATGGCTGGCAAGATTTTGTTCAACGTTACTCCATTGGCATTGGATACTTTCTAGTATTCACTTATGAAGGAAATTCAAATTTCATTGTTCATATCTTTAATATGAGTACTGCTGAGTTAAACTATCAATCAGCCATGAGAAGCCGTACTGAAGGGCCTTGCTATGCAAATTATCATCCTATTTTTGAAGACATTGAAGATATCGACTCCTTTGAATTCCTGGATTCATCACCTTCAAACCTTACTCCTGGTGCATTGCAAGACAAGGTTTTTAGTGGATCTTTGGATCAACTAACACCAGCGAAGAATCATACTCCATCATTGCAGAATTTGTTTAATGGGGGGTCTAAACTCAACCACGTTAACTGGGGAGATATCGGTGGTACTCTTTCTTCAAAGAGTGCCATTCAGTCAACCAGAGATATAGGTGTTCAGTTCAATGCTAATGAGTTTAAAAAGTCCACTGAAGGATTGAAATTGCGCTATCCTAATGAGGAAGGGGTTAATAATACTGATACGAAGAAAACTTCAAGAAAGAAGCGGAAATCAGATCCAAGTAAGCTCTTTTAGATAAGTTTTTTTTCTCTTTCTATTGTACTACGTAGCACTGACATTTTAGATCAAAGGCGTGCCCGAGTGTCTGACACACATCATTGTCCTACTCTGCCGCTACACTGACACGTGTGGTTACATTCAAATATTTCACCTTTTGAAATGATGACCGGTGTTGTCATCTCAGTGTCGTGTCTTCCTGTGTCGGTGTTTCATGGCTATTATCTAGTAACATAAAAAATTAATTTTGTCATCAATTTAATTTGTGTAACTGTAGGTGCACTGGAAGCCACTGCTGAAAATGATGAGGAGGCAGAGCGCTATCGATTCTATGAAAGTGCGTCAGCAAGAAAAAGAACTGTAACAGCAGAAGAAAGAGAAAGGGCAATTAATGAGTCAAAGACTTTTGAACCAACCAATCCATTCTGTAGAGTTGTCCTGCGGCCCTCTTATTTATATAGAGGATGTATAATGGTGAGATATTGAATTCAATTTTTTTGATATTTACCTTTAGTCTTCTTCGACATTTCGTGTTGCGTACTCAGCTCGTGTTTCTGTTTTCCAGTATTTGCCTTCCTGCTTTGCAGAAAAGAATTTGAACGGTGTTTCAGGATTCATTAAGCTTCAGATCTCTGATGGGAGACAGTGGCCTGTTCGCTGCCTATATAAAGGAGGCCGAGCAAAGTTAAGCCAAGGATGGTATGAATTTACATTAGAGAACAATTTAGGGGAAGGCGATATCTGTGTTTTTGAGCTGCTTAGAACCAGAGAGGTAGTGCTGCAGGTTACTTTGTTTCGTGTAAAAGAGGACGAGTCAGGGTTATTCAACCCTTCTTCACAGCCAAGCCAAAATGTGAGCCATGCAAAAATGTTGAACCCTCACTTGCAGCACCGTGTCAGCTCAACCAAATCAGCTAAAAATTAG
Protein sequence

>MS.gene040831.t1

MPPRPSFHKLILPSSLQTRQLRIPDNFLRKYGAQLSTIATLTVPDGTVWRLGLKKVDNRIWFVDGWQDFVQRYSIGIGYFLVFTYEGNSNFIVHIFNMSTAELNYQSAMRSRTEGPCYANYHPIFEDIEDIDSFEFLDSSPSNLTPGALQDKVFSGSLDQLTPAKNHTPSLQNLFNGGSKLNHVNWGDIGGTLSSKSAIQSTRDIGVQFNANEFKKSTEGLKLRYPNEEGVNNTDTKKTSRKKRKSDPSALEATAENDEEAERYRFYESASARKRTVTAEERERAINESKTFEPTNPFCRVVLRPSYLYRGCIMSSSTFRVAYSARVSVFQYLPSCFAEKNLNGVSGFIKLQISDGRQWPVRCLYKGGRAKLSQGWYEFTLENNLGEGDICVFELLRTREVVLQVTLFRVKEDESGLFNPSSQPSQNVSHAKMLNPHLQHRVSSTKSAKN