Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040833.t1 | XP_024632331.1 | 69.2 | 383 | 84 | 2 | 21 | 403 | 22 | 370 | 3.90E-108 | 401.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040833.t1 | Q8L3W1 | 35.8 | 388 | 182 | 8 | 13 | 394 | 13 | 339 | 3.2e-50 | 200.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040833.t1 | A0A072VG30 | 69.2 | 383 | 84 | 2 | 21 | 403 | 22 | 370 | 2.8e-108 | 401.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene040833.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040833.t1 | MTR_1g034210 | 71.762 | 386 | 69 | 4 | 21 | 403 | 22 | 370 | 0.0 | 534 |
| MS.gene040833.t1 | MTR_1g034210 | 68.235 | 340 | 68 | 4 | 21 | 357 | 22 | 324 | 6.80e-155 | 440 |
| MS.gene040833.t1 | MTR_1g034240 | 56.028 | 423 | 104 | 11 | 21 | 402 | 22 | 403 | 5.85e-132 | 386 |
| MS.gene040833.t1 | MTR_4g068320 | 40.952 | 420 | 167 | 9 | 21 | 401 | 21 | 398 | 1.57e-93 | 287 |
| MS.gene040833.t1 | MTR_3g005480 | 46.512 | 86 | 46 | 0 | 15 | 100 | 30 | 115 | 5.23e-23 | 97.8 |
| MS.gene040833.t1 | MTR_3g005480 | 36.752 | 117 | 61 | 4 | 282 | 392 | 152 | 261 | 1.63e-11 | 64.7 |
| MS.gene040833.t1 | MTR_5g070440 | 43.564 | 101 | 55 | 1 | 15 | 113 | 30 | 130 | 1.51e-22 | 96.7 |
| MS.gene040833.t1 | MTR_5g070440 | 34.965 | 143 | 81 | 6 | 252 | 391 | 135 | 268 | 9.14e-12 | 65.5 |
| MS.gene040833.t1 | MTR_3g005490 | 46.512 | 86 | 46 | 0 | 15 | 100 | 30 | 115 | 9.16e-22 | 94.4 |
| MS.gene040833.t1 | MTR_3g005420 | 43.564 | 101 | 55 | 1 | 15 | 113 | 298 | 398 | 3.68e-18 | 86.7 |
| MS.gene040833.t1 | MTR_3g005420 | 37.234 | 94 | 58 | 1 | 16 | 108 | 50 | 143 | 3.38e-15 | 77.8 |
| MS.gene040833.t1 | MTR_3g005420 | 28.931 | 159 | 97 | 5 | 237 | 391 | 390 | 536 | 4.45e-11 | 65.1 |
| MS.gene040833.t1 | MTR_3g005460 | 41.489 | 94 | 55 | 0 | 16 | 109 | 35 | 128 | 1.06e-17 | 85.1 |
| MS.gene040833.t1 | MTR_3g005460 | 43.678 | 87 | 48 | 1 | 15 | 100 | 271 | 357 | 1.43e-16 | 82.0 |
| MS.gene040833.t1 | MTR_3g005440 | 38.983 | 118 | 56 | 2 | 1 | 102 | 1 | 118 | 1.17e-17 | 84.7 |
| MS.gene040833.t1 | MTR_3g005440 | 46.512 | 86 | 46 | 0 | 15 | 100 | 251 | 336 | 1.27e-15 | 78.6 |
| MS.gene040833.t1 | MTR_3g005495 | 37.168 | 113 | 64 | 2 | 3 | 113 | 15 | 122 | 9.77e-17 | 82.0 |
| MS.gene040833.t1 | MTR_3g005495 | 40.698 | 86 | 51 | 0 | 15 | 100 | 252 | 337 | 6.07e-16 | 79.7 |
| MS.gene040833.t1 | MTR_3g005420 | 37.234 | 94 | 58 | 1 | 16 | 108 | 31 | 124 | 1.96e-15 | 78.2 |
| MS.gene040833.t1 | MTR_3g005420 | 43.548 | 62 | 35 | 0 | 15 | 76 | 279 | 340 | 9.23e-12 | 67.0 |
| MS.gene040833.t1 | MTR_3g005420 | 29.677 | 155 | 93 | 5 | 241 | 391 | 340 | 482 | 3.94e-11 | 65.1 |
| MS.gene040833.t1 | MTR_3g061340 | 38.947 | 95 | 55 | 2 | 21 | 112 | 25 | 119 | 3.35e-15 | 75.9 |
| MS.gene040833.t1 | MTR_3g061320 | 41.379 | 87 | 49 | 1 | 21 | 105 | 25 | 111 | 4.79e-15 | 75.5 |
| MS.gene040833.t1 | MTR_1g108780 | 34.746 | 118 | 68 | 4 | 284 | 399 | 188 | 298 | 1.77e-14 | 75.1 |
| MS.gene040833.t1 | MTR_7g050710 | 38.384 | 99 | 60 | 1 | 9 | 107 | 17 | 114 | 2.33e-14 | 73.9 |
| MS.gene040833.t1 | MTR_7g050710 | 31.200 | 125 | 76 | 3 | 276 | 391 | 184 | 307 | 7.68e-11 | 63.2 |
| MS.gene040833.t1 | MTR_3g061290 | 39.080 | 87 | 51 | 1 | 21 | 105 | 25 | 111 | 5.22e-14 | 70.9 |
| MS.gene040833.t1 | MTR_5g044670 | 37.805 | 82 | 51 | 0 | 22 | 103 | 32 | 113 | 7.94e-14 | 72.4 |
| MS.gene040833.t1 | MTR_3g061350 | 36.559 | 93 | 57 | 1 | 21 | 111 | 25 | 117 | 1.69e-13 | 70.9 |
| MS.gene040833.t1 | MTR_7g050580 | 38.776 | 98 | 57 | 2 | 9 | 104 | 17 | 113 | 1.78e-13 | 71.2 |
| MS.gene040833.t1 | MTR_7g050580 | 32.520 | 123 | 75 | 3 | 276 | 391 | 169 | 290 | 6.67e-11 | 63.5 |
| MS.gene040833.t1 | MTR_7g050590 | 38.554 | 83 | 49 | 1 | 22 | 102 | 2 | 84 | 1.87e-13 | 70.9 |
| MS.gene040833.t1 | MTR_3g098790 | 28.902 | 173 | 109 | 4 | 233 | 391 | 127 | 299 | 2.06e-13 | 71.2 |
| MS.gene040833.t1 | MTR_3g098790 | 37.634 | 93 | 56 | 1 | 15 | 105 | 22 | 114 | 5.94e-13 | 69.7 |
| MS.gene040833.t1 | MTR_3g061310 | 37.931 | 87 | 52 | 1 | 21 | 105 | 25 | 111 | 3.03e-13 | 70.1 |
| MS.gene040833.t1 | MTR_3g061330 | 28.916 | 166 | 106 | 3 | 21 | 182 | 25 | 182 | 5.03e-13 | 68.9 |
| MS.gene040833.t1 | MTR_3g061370 | 28.313 | 166 | 108 | 3 | 21 | 182 | 22 | 180 | 5.23e-13 | 69.3 |
| MS.gene040833.t1 | MTR_3g061370 | 32.203 | 118 | 59 | 4 | 283 | 390 | 175 | 281 | 1.60e-11 | 65.1 |
| MS.gene040833.t1 | MTR_7g050560 | 38.554 | 83 | 49 | 1 | 22 | 102 | 29 | 111 | 7.55e-13 | 69.3 |
| MS.gene040833.t1 | MTR_7g050720 | 37.209 | 86 | 54 | 0 | 15 | 100 | 19 | 104 | 1.42e-12 | 68.6 |
| MS.gene040833.t1 | MTR_8g103940 | 28.169 | 213 | 127 | 9 | 204 | 396 | 130 | 336 | 1.71e-12 | 69.3 |
| MS.gene040833.t1 | MTR_1g035460 | 31.933 | 119 | 73 | 5 | 286 | 403 | 187 | 298 | 2.63e-12 | 68.2 |
| MS.gene040833.t1 | MTR_1g035460 | 30.579 | 121 | 73 | 2 | 22 | 139 | 2 | 114 | 1.87e-11 | 65.5 |
| MS.gene040833.t1 | MTR_3g061300 | 30.909 | 110 | 69 | 4 | 283 | 389 | 17 | 122 | 3.69e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040833.t1 | AT3G18990 | 41.645 | 377 | 159 | 7 | 21 | 394 | 21 | 339 | 2.03e-84 | 261 |
| MS.gene040833.t1 | AT3G18990 | 41.379 | 377 | 160 | 7 | 21 | 394 | 21 | 339 | 5.30e-83 | 258 |
| MS.gene040833.t1 | AT1G49480 | 57.059 | 170 | 66 | 5 | 226 | 394 | 61 | 224 | 3.80e-52 | 174 |
| MS.gene040833.t1 | AT1G49480 | 57.059 | 170 | 66 | 5 | 226 | 394 | 61 | 224 | 3.80e-52 | 174 |
| MS.gene040833.t1 | AT1G49480 | 57.059 | 170 | 66 | 5 | 226 | 394 | 61 | 224 | 3.80e-52 | 174 |
| MS.gene040833.t1 | AT4G01580 | 38.636 | 88 | 52 | 1 | 17 | 102 | 41 | 128 | 1.50e-13 | 69.3 |
| MS.gene040833.t1 | AT3G18960 | 36.471 | 85 | 54 | 0 | 14 | 98 | 1 | 85 | 9.34e-13 | 66.6 |
| MS.gene040833.t1 | AT3G18960 | 36.585 | 82 | 52 | 0 | 17 | 98 | 41 | 122 | 3.04e-12 | 65.9 |
| MS.gene040833.t1 | AT3G18960 | 38.462 | 78 | 48 | 0 | 21 | 98 | 45 | 122 | 5.68e-12 | 64.7 |
Find 81 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTAAGGCCAAGGATTTC+TGG | 0.171763 | 1.2:-18752656 | None:intergenic |
| GCAAATTTGAAGGGTGTTTC+AGG | 0.187865 | 1.2:+18756094 | MS.gene040833:CDS |
| TATCGACTCCTTTGATTTCC+TGG | 0.264885 | 1.2:+18753410 | MS.gene040833:CDS |
| TTTACACAAGAGAACGGTTT+AGG | 0.281466 | 1.2:+18756214 | MS.gene040833:CDS |
| CAGTATTTGCCTACCAGATT+TGG | 0.288300 | 1.2:+18756070 | MS.gene040833:intron |
| TATGAATCCCCTATATAAAT+AGG | 0.304148 | 1.2:-18755957 | None:intergenic |
| CTCCTTTGATTTCCTGGATT+CGG | 0.304226 | 1.2:+18753416 | MS.gene040833:CDS |
| CTTCAAATTTGCTCCAAATC+TGG | 0.314432 | 1.2:-18756083 | None:intergenic |
| TCTTGCAGACGCACGTTCAT+AGG | 0.341018 | 1.2:-18755834 | None:intergenic |
| CAGAATTGTGCACAACATTA+AGG | 0.344047 | 1.2:-18752670 | None:intergenic |
| TTTATATAGGGGATTCATAA+TGG | 0.351295 | 1.2:+18755961 | MS.gene040833:CDS |
| CTATTCCTGGCGGCACCGTC+TGG | 0.365680 | 1.2:+18753151 | MS.gene040833:CDS |
| GCGAGCCTCCTATTTATATA+GGG | 0.371848 | 1.2:+18755949 | MS.gene040833:CDS |
| CTGGCGTCTAGGATTGAAAA+AGG | 0.378642 | 1.2:+18753170 | MS.gene040833:CDS |
| TTACACAAGAGAACGGTTTA+GGG | 0.383205 | 1.2:+18756215 | MS.gene040833:CDS |
| GTCGCAACTGTCACTATTCC+TGG | 0.396303 | 1.2:+18753138 | MS.gene040833:CDS |
| TTTATTCAACGCTACTCAAT+TGG | 0.396344 | 1.2:+18753231 | MS.gene040833:CDS |
| TGCGAGCCTCCTATTTATAT+AGG | 0.401271 | 1.2:+18755948 | MS.gene040833:CDS |
| CAAGAAAACTTCAAGAAAGA+AGG | 0.440243 | 1.2:+18755459 | MS.gene040833:CDS |
| TACTTTGTTTCGTCTAAAAG+AGG | 0.450484 | 1.2:+18756294 | MS.gene040833:CDS |
| GTGTAAATTCGTACCATCCT+TGG | 0.456711 | 1.2:-18756198 | None:intergenic |
| CATAGAAAGGCTCTTCAGTC+CGG | 0.462587 | 1.2:-18753353 | None:intergenic |
| CAGATTTGGAGCAAATTTGA+AGG | 0.476313 | 1.2:+18756084 | MS.gene040833:CDS |
| GGCGGCACCGTCTGGCGTCT+AGG | 0.484238 | 1.2:+18753159 | MS.gene040833:CDS |
| GCCTTGCGGCCAGAAATCCT+TGG | 0.492339 | 1.2:+18752647 | MS.gene040833:CDS |
| CTAACGCGGTGCTGCAAGTG+AGG | 0.494100 | 1.2:-18756323 | None:intergenic |
| CAACGCTACTCAATTGGCAT+TGG | 0.496965 | 1.2:+18753237 | MS.gene040833:CDS |
| GGTTTGAAAGTGCCGAATCC+AGG | 0.497863 | 1.2:-18753428 | None:intergenic |
| AACTTGCAACACTACATCTC+TGG | 0.504545 | 1.2:-18756272 | None:intergenic |
| TAATGATAGTCTTCATAGAA+AGG | 0.511768 | 1.2:-18753366 | None:intergenic |
| AGAGAACGGTTTAGGGGAAG+GGG | 0.514068 | 1.2:+18756222 | MS.gene040833:CDS |
| TTGTGGAACTGCAGGTGCAC+AGG | 0.514227 | 1.2:+18753842 | MS.gene040833:intron |
| TTGTGGAACTGCAGGTGCAC+AGG | 0.514227 | 1.2:+18754218 | MS.gene040833:intron |
| TTGTGGAACTGCAGGTGCAC+AGG | 0.514227 | 1.2:+18755390 | MS.gene040833:intron |
| TGTTTCCTCAGAAAATTATC+CGG | 0.517233 | 1.2:-18753096 | None:intergenic |
| TGTCAGATGAAGAAAGAGAA+AGG | 0.518068 | 1.2:+18755870 | MS.gene040833:CDS |
| AGACGCCAGACGGTGCCGCC+AGG | 0.521079 | 1.2:-18753156 | None:intergenic |
| TGCTTTGCAATGCACCAGTA+GGG | 0.526469 | 1.2:-18753449 | None:intergenic |
| AAGAAAACTTCAAGAAAGAA+GGG | 0.528573 | 1.2:+18755460 | MS.gene040833:CDS |
| TCGGCACTTTCAAACCCTAC+TGG | 0.529484 | 1.2:+18753435 | MS.gene040833:CDS |
| AAGAGAACGGTTTAGGGGAA+GGG | 0.530709 | 1.2:+18756221 | MS.gene040833:CDS |
| ACAAGACAGTAAGGATTAGT+TGG | 0.534586 | 1.2:-18755920 | None:intergenic |
| CAAGAGAACGGTTTAGGGGA+AGG | 0.536429 | 1.2:+18756220 | MS.gene040833:CDS |
| CGAGCCTCCTATTTATATAG+GGG | 0.536441 | 1.2:+18755950 | MS.gene040833:CDS |
| AGCCATCCACAAAACAAATA+CGG | 0.548306 | 1.2:-18753200 | None:intergenic |
| AGATTTGGAGCAAATTTGAA+GGG | 0.548691 | 1.2:+18756085 | MS.gene040833:CDS |
| GTCAGATGAAGAAAGAGAAA+GGG | 0.559696 | 1.2:+18755871 | MS.gene040833:CDS |
| AAGAGAAAGGGCAATGAATG+AGG | 0.560927 | 1.2:+18755883 | MS.gene040833:CDS |
| CGCAGACTAACAAGACAGTA+AGG | 0.562349 | 1.2:-18755929 | None:intergenic |
| GCTGCCTTGATGACAAAGGC+CGG | 0.563135 | 1.2:+18756164 | MS.gene040833:CDS |
| ATGATTCAACAATGAGAAGC+CGG | 0.564717 | 1.2:+18753334 | MS.gene040833:CDS |
| GCCAAGGATTTCTGGCCGCA+AGG | 0.567108 | 1.2:-18752648 | None:intergenic |
| TGTGCACAACATTAAGGCCA+AGG | 0.574140 | 1.2:-18752664 | None:intergenic |
| ACTCCACTGTTTCTCACCAT+CGG | 0.575733 | 1.2:-18756137 | None:intergenic |
| TACTATTCACATACGAAGGA+AGG | 0.576020 | 1.2:+18753268 | MS.gene040833:CDS |
| TTCTTATGCTCGTTGCCTTG+CGG | 0.583101 | 1.2:+18752633 | None:intergenic |
| CAGTTGCGACAGTCGAAAGT+TGG | 0.587358 | 1.2:-18753125 | None:intergenic |
| CATAGTTTAACTCAGTAGTA+CGG | 0.587876 | 1.2:-18753314 | None:intergenic |
| ATTCCGCTTCAGACATCCGA+TGG | 0.591154 | 1.2:+18756121 | MS.gene040833:CDS |
| CAAGAAAGAAGCGGAAATCG+CGG | 0.592113 | 1.2:+18753922 | MS.gene040833:CDS |
| AAATTTGCTCCAAATCTGGT+AGG | 0.596789 | 1.2:-18756079 | None:intergenic |
| TACGAATTTACACAAGAGAA+CGG | 0.605728 | 1.2:+18756208 | MS.gene040833:CDS |
| CTCCACTGAAAATGATGAGG+AGG | 0.606101 | 1.2:+18753869 | MS.gene040833:CDS |
| CTCCACTGAAAATGATGAGG+AGG | 0.606101 | 1.2:+18754245 | MS.gene040833:CDS |
| CTCCACTGAAAATGATGAGG+AGG | 0.606101 | 1.2:+18755417 | MS.gene040833:CDS |
| TTTCAATCCTAGACGCCAGA+CGG | 0.606617 | 1.2:-18753166 | None:intergenic |
| AGAAAACTTCAAGAAAGAAG+CGG | 0.610439 | 1.2:+18753913 | MS.gene040833:CDS |
| AGAAAACTTCAAGAAAGAAG+CGG | 0.610439 | 1.2:+18754289 | MS.gene040833:CDS |
| TGCCGAATCCAGGAAATCAA+AGG | 0.612101 | 1.2:-18753418 | None:intergenic |
| TCACCATCGGATGTCTGAAG+CGG | 0.621327 | 1.2:-18756124 | None:intergenic |
| GAATCCCCTATATAAATAGG+AGG | 0.621609 | 1.2:-18755954 | None:intergenic |
| CATCCGATGGTGAGAAACAG+TGG | 0.623709 | 1.2:+18756134 | MS.gene040833:CDS |
| TAACGCGGTGCTGCAAGTGA+GGG | 0.625213 | 1.2:-18756322 | None:intergenic |
| AGCCTCCACTGAAAATGATG+AGG | 0.645254 | 1.2:+18753866 | MS.gene040833:CDS |
| AGCCTCCACTGAAAATGATG+AGG | 0.645254 | 1.2:+18754242 | MS.gene040833:CDS |
| AGCCTCCACTGAAAATGATG+AGG | 0.645254 | 1.2:+18755414 | MS.gene040833:CDS |
| TTACTACTATTCACATACGA+AGG | 0.656130 | 1.2:+18753264 | MS.gene040833:CDS |
| TACACAAGAGAACGGTTTAG+GGG | 0.668422 | 1.2:+18756216 | MS.gene040833:CDS |
| GTTCGCTGCCTTGATGACAA+AGG | 0.674772 | 1.2:+18756160 | MS.gene040833:CDS |
| CAAGAAAGAAGGGAAAATCG+CGG | 0.697880 | 1.2:+18755470 | MS.gene040833:CDS |
| GCAACTGTCACTATTCCTGG+CGG | 0.770854 | 1.2:+18753141 | MS.gene040833:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAATAAATTGGTT+TGG | - | chr1.2:18752841-18752860 | None:intergenic | 10.0% |
| !! | TCTCTATTAAATAAATAAAT+TGG | - | chr1.2:18752846-18752865 | None:intergenic | 10.0% |
| !!! | AAAAAAAATAGTTTAAAATG+TGG | - | chr1.2:18754632-18754651 | None:intergenic | 10.0% |
| !!! | AATTTTTTGATATTTTTCTT+TGG | + | chr1.2:18755999-18756018 | MS.gene040833:intron | 10.0% |
| !!! | ACATTTTAAACTATTTTTTT+TGG | + | chr1.2:18754631-18754650 | MS.gene040833:intron | 10.0% |
| !! | TTGAAGTTTGAATAAAAATA+TGG | + | chr1.2:18755217-18755236 | MS.gene040833:intron | 15.0% |
| !! | ATTGCTTCTGATAAAAAAAT+TGG | - | chr1.2:18755096-18755115 | None:intergenic | 20.0% |
| !! | ATTGTCATCAATATAATTTG+TGG | + | chr1.2:18753825-18753844 | MS.gene040833:intron | 20.0% |
| !! | CAAATTTGATTACTGAAAAA+TGG | - | chr1.2:18754960-18754979 | None:intergenic | 20.0% |
| !! | TGTATAATTAAGAAAGTTGT+TGG | - | chr1.2:18754792-18754811 | None:intergenic | 20.0% |
| !! | TTAATTATACAGAGAAAGAA+TGG | + | chr1.2:18754801-18754820 | MS.gene040833:intron | 20.0% |
| !!! | AATATTATTTTCAATTGCAG+AGG | + | chr1.2:18753070-18753089 | MS.gene040833:intron | 20.0% |
| !!! | CATTTTTCAGTAATCAAATT+TGG | + | chr1.2:18754958-18754977 | MS.gene040833:intron | 20.0% |
| !!! | TATTTCACGTTTTCAAATTA+CGG | + | chr1.2:18753729-18753748 | MS.gene040833:intron | 20.0% |
| !!! | TATTTCACGTTTTCAAATTA+TGG | + | chr1.2:18753729-18753748 | MS.gene040833:intron | 20.0% |
| ! | AAAACTAAAAACCTGATAAC+CGG | - | chr1.2:18755266-18755285 | None:intergenic | 25.0% |
| ! | AAGAAAACTTCAAGAAAGAA+GGG | + | chr1.2:18753548-18753567 | MS.gene040833:intron | 25.0% |
| ! | ATTGTCATCAGAATAATTTG+TGG | + | chr1.2:18755737-18755756 | MS.gene040833:intron | 25.0% |
| ! | TAATGATAGTCTTCATAGAA+AGG | - | chr1.2:18753369-18753388 | None:intergenic | 25.0% |
| ! | TATGAATCCCCTATATAAAT+AGG | - | chr1.2:18755960-18755979 | None:intergenic | 25.0% |
| ! | TATGAGCATTTACTAACATT+TGG | + | chr1.2:18753041-18753060 | MS.gene040833:intron | 25.0% |
| ! | TCAAACACTCTTTCAATTAT+TGG | - | chr1.2:18755308-18755327 | None:intergenic | 25.0% |
| ! | TCAGTAATCAAATTTGGATT+TGG | + | chr1.2:18754964-18754983 | MS.gene040833:intron | 25.0% |
| ! | TGTGCTCTATTTATTTGATT+TGG | - | chr1.2:18754929-18754948 | None:intergenic | 25.0% |
| ! | TTTACTATACTATGTAGCAT+TGG | + | chr1.2:18753620-18753639 | MS.gene040833:intron | 25.0% |
| ! | TTTATATAGGGGATTCATAA+TGG | + | chr1.2:18755961-18755980 | MS.gene040833:CDS | 25.0% |
| !! | TATTTCACGTTTTCAAACTA+CGG | + | chr1.2:18754460-18754479 | MS.gene040833:intron | 25.0% |
| !!! | AAACTATTTTTTTTGGCTAC+CGG | + | chr1.2:18754638-18754657 | MS.gene040833:intron | 25.0% |
| !!! | GACTATCATTATGTTTTTGA+AGG | + | chr1.2:18753378-18753397 | MS.gene040833:CDS | 25.0% |
| !!! | GTTTGAGATTAATGTTCTTT+TGG | + | chr1.2:18755146-18755165 | MS.gene040833:intron | 25.0% |
| !!! | GTTTTAAAAAAGTGATGATG+TGG | + | chr1.2:18755281-18755300 | MS.gene040833:intron | 25.0% |
| !!! | TTTTTTCCTCTTTTTGATTC+TGG | + | chr1.2:18752986-18753005 | MS.gene040833:intron | 25.0% |
| AACATCACAAACTTGTCAAA+TGG | + | chr1.2:18754859-18754878 | MS.gene040833:intron | 30.0% | |
| ACATCACAAACTTGTCAAAT+GGG | + | chr1.2:18754860-18754879 | MS.gene040833:intron | 30.0% | |
| AGAAAACTTCAAGAAAGAAG+CGG | + | chr1.2:18753549-18753568 | MS.gene040833:intron | 30.0% | |
| CAAGAAAACTTCAAGAAAGA+AGG | + | chr1.2:18753547-18753566 | MS.gene040833:intron | 30.0% | |
| CATAGTTTAACTCAGTAGTA+CGG | - | chr1.2:18753317-18753336 | None:intergenic | 30.0% | |
| CCAACAAAGACAAGAAAATA+AGG | + | chr1.2:18753520-18753539 | MS.gene040833:intron | 30.0% | |
| GCAGATGAGATAATTAAAGA+TGG | + | chr1.2:18755043-18755062 | MS.gene040833:intron | 30.0% | |
| TACGAATTTACACAAGAGAA+CGG | + | chr1.2:18756208-18756227 | MS.gene040833:CDS | 30.0% | |
| TCACTGTGTAAGTAAATAAC+CGG | - | chr1.2:18754660-18754679 | None:intergenic | 30.0% | |
| TGTTTCCTCAGAAAATTATC+CGG | - | chr1.2:18753099-18753118 | None:intergenic | 30.0% | |
| TTACTACTATTCACATACGA+AGG | + | chr1.2:18753264-18753283 | MS.gene040833:CDS | 30.0% | |
| TTTATTCAACGCTACTCAAT+TGG | + | chr1.2:18753231-18753250 | MS.gene040833:CDS | 30.0% | |
| TTTGTGATGTTGAAGCTTAA+TGG | - | chr1.2:18754850-18754869 | None:intergenic | 30.0% | |
| ! | AATATAATTTGTGGAACTGC+AGG | + | chr1.2:18753834-18753853 | MS.gene040833:intron | 30.0% |
| ! | AGATTTGGAGCAAATTTGAA+GGG | + | chr1.2:18756085-18756104 | MS.gene040833:CDS | 30.0% |
| ! | AGTTTAAAATGTGGATGACT+TGG | - | chr1.2:18754623-18754642 | None:intergenic | 30.0% |
| ! | ATTAAGAAAGTTGTTGGTTG+TGG | - | chr1.2:18754786-18754805 | None:intergenic | 30.0% |
| ! | ATTAGTTTCATCATGAGAGA+TGG | + | chr1.2:18755173-18755192 | MS.gene040833:intron | 30.0% |
| ! | CTTCTTTCTTGAAGTTTTCT+TGG | - | chr1.2:18753549-18753568 | None:intergenic | 30.0% |
| ! | TACTTTGTTTCGTCTAAAAG+AGG | + | chr1.2:18756294-18756313 | MS.gene040833:CDS | 30.0% |
| !! | ATAATTTTCTGAGGAAACAC+GGG | + | chr1.2:18753100-18753119 | MS.gene040833:CDS | 30.0% |
| !! | GATAATTTTCTGAGGAAACA+CGG | + | chr1.2:18753099-18753118 | MS.gene040833:CDS | 30.0% |
| !! | GTTTTGTTGAAATTCGATTG+TGG | + | chr1.2:18755122-18755141 | MS.gene040833:intron | 30.0% |
| !! | TGTTGCAATTCTTTGCTTTT+TGG | + | chr1.2:18752787-18752806 | MS.gene040833:intron | 30.0% |
| !!! | CCTTATTTTCTTGTCTTTGT+TGG | - | chr1.2:18753523-18753542 | None:intergenic | 30.0% |
| !!! | GCTGTGATATAGGTTTTTTA+TGG | + | chr1.2:18755021-18755040 | MS.gene040833:intron | 30.0% |
| !!! | GTTGCAATTCTTTGCTTTTT+GGG | + | chr1.2:18752788-18752807 | MS.gene040833:intron | 30.0% |
| AATGAGCCAGAATCAAAAAG+AGG | - | chr1.2:18752995-18753014 | None:intergenic | 35.0% | |
| AGCCATCCACAAAACAAATA+CGG | - | chr1.2:18753203-18753222 | None:intergenic | 35.0% | |
| ATGATTCAACAATGAGAAGC+CGG | + | chr1.2:18753334-18753353 | MS.gene040833:CDS | 35.0% | |
| CAGAATTGTGCACAACATTA+AGG | - | chr1.2:18752673-18752692 | None:intergenic | 35.0% | |
| CTCTCATGATGAAACTAATG+AGG | - | chr1.2:18755172-18755191 | None:intergenic | 35.0% | |
| GAATCCCCTATATAAATAGG+AGG | - | chr1.2:18755957-18755976 | None:intergenic | 35.0% | |
| GTCAGATGAAGAAAGAGAAA+GGG | + | chr1.2:18755871-18755890 | MS.gene040833:CDS | 35.0% | |
| TACTATTCACATACGAAGGA+AGG | + | chr1.2:18753268-18753287 | MS.gene040833:CDS | 35.0% | |
| TCAAAGAACCTGCGTTAATT+GGG | + | chr1.2:18754887-18754906 | MS.gene040833:intron | 35.0% | |
| TGTCAGATGAAGAAAGAGAA+AGG | + | chr1.2:18755870-18755889 | MS.gene040833:CDS | 35.0% | |
| TGTTAGTAAACCAGTATAGC+CGG | + | chr1.2:18755244-18755263 | MS.gene040833:intron | 35.0% | |
| TTACACAAGAGAACGGTTTA+GGG | + | chr1.2:18756215-18756234 | MS.gene040833:CDS | 35.0% | |
| TTCAAAGAACCTGCGTTAAT+TGG | + | chr1.2:18754886-18754905 | MS.gene040833:intron | 35.0% | |
| TTTACACAAGAGAACGGTTT+AGG | + | chr1.2:18756214-18756233 | MS.gene040833:CDS | 35.0% | |
| ! | AAATTTGCTCCAAATCTGGT+AGG | - | chr1.2:18756082-18756101 | None:intergenic | 35.0% |
| ! | ACAAGACAGTAAGGATTAGT+TGG | - | chr1.2:18755923-18755942 | None:intergenic | 35.0% |
| ! | AGAATAATTTGTGGAACTGC+AGG | + | chr1.2:18755746-18755765 | MS.gene040833:intron | 35.0% |
| ! | CAGATTTGGAGCAAATTTGA+AGG | + | chr1.2:18756084-18756103 | MS.gene040833:CDS | 35.0% |
| ! | CTTCAAATTTGCTCCAAATC+TGG | - | chr1.2:18756086-18756105 | None:intergenic | 35.0% |
| ! | GCATTGACATTTCAGATTGA+AGG | + | chr1.2:18755548-18755567 | MS.gene040833:intron | 35.0% |
| ! | TCACGTTTTCAAATTATGGC+TGG | + | chr1.2:18755645-18755664 | MS.gene040833:intron | 35.0% |
| ! | TTTTCAATTGCAGAGGATTC+CGG | + | chr1.2:18753077-18753096 | MS.gene040833:intron | 35.0% |
| !! | AAATTGGTTTGGCCTAAGTA+TGG | - | chr1.2:18752830-18752849 | None:intergenic | 35.0% |
| !! | AAGCAAACTTGCTGTGATAT+AGG | + | chr1.2:18755011-18755030 | MS.gene040833:intron | 35.0% |
| !! | ATCCTTGGCTTAACTTTTTC+CGG | - | chr1.2:18756186-18756205 | None:intergenic | 35.0% |
| !! | CTTTTTGGGAGTGAACAATT+GGG | + | chr1.2:18752802-18752821 | MS.gene040833:intron | 35.0% |
| !! | GGAGGCTTTTGGAAAATTAA+AGG | - | chr1.2:18754829-18754848 | None:intergenic | 35.0% |
| !! | TAATTTTCTGAGGAAACACG+GGG | + | chr1.2:18753101-18753120 | MS.gene040833:CDS | 35.0% |
| !! | TTTTTGGGAGTGAACAATTG+GGG | + | chr1.2:18752803-18752822 | MS.gene040833:intron | 35.0% |
| !!! | AACCGTATTTGTTTTGTGGA+TGG | + | chr1.2:18753198-18753217 | MS.gene040833:CDS | 35.0% |
| AACAATTGGGGACCATACTT+AGG | + | chr1.2:18752815-18752834 | MS.gene040833:intron | 40.0% | |
| AACTTGCAACACTACATCTC+TGG | - | chr1.2:18756275-18756294 | None:intergenic | 40.0% | |
| AAGAGAAAGGGCAATGAATG+AGG | + | chr1.2:18755883-18755902 | MS.gene040833:CDS | 40.0% | |
| ACATTAAGGCCAAGGATTTC+TGG | - | chr1.2:18752659-18752678 | None:intergenic | 40.0% | |
| ACGTTCTCTTTCTCTCTCTT+TGG | + | chr1.2:18754720-18754739 | MS.gene040833:intron | 40.0% | |
| AGATGAATCCCAATTAACGC+AGG | - | chr1.2:18754898-18754917 | None:intergenic | 40.0% | |
| ATAACCACTCTCTCTTTGAG+TGG | + | chr1.2:18754596-18754615 | MS.gene040833:intron | 40.0% | |
| ATTGCAAAGCAAGATTCTGC+TGG | + | chr1.2:18753461-18753480 | MS.gene040833:intron | 40.0% | |
| CAAATCTGGTAGGCAAATAC+TGG | - | chr1.2:18756072-18756091 | None:intergenic | 40.0% | |
| CAAGAAAGAAGGGAAAATCG+CGG | + | chr1.2:18755470-18755489 | MS.gene040833:CDS | 40.0% | |
| CAGTATTTGCCTACCAGATT+TGG | + | chr1.2:18756070-18756089 | MS.gene040833:intron | 40.0% | |
| CGAGCCTCCTATTTATATAG+GGG | + | chr1.2:18755950-18755969 | MS.gene040833:CDS | 40.0% | |
| CTCAAAGAGAGAGTGGTTAT+TGG | - | chr1.2:18754596-18754615 | None:intergenic | 40.0% | |
| GAAGACCTTTCAAATGACAG+AGG | - | chr1.2:18754751-18754770 | None:intergenic | 40.0% | |
| GCGAGCCTCCTATTTATATA+GGG | + | chr1.2:18755949-18755968 | MS.gene040833:CDS | 40.0% | |
| GGAAAAAGTTAAGCCAAGGA+TGG | + | chr1.2:18756185-18756204 | MS.gene040833:CDS | 40.0% | |
| GTGATGTTGAAGCTTAATGG+AGG | - | chr1.2:18754847-18754866 | None:intergenic | 40.0% | |
| GTGTAAATTCGTACCATCCT+TGG | - | chr1.2:18756201-18756220 | None:intergenic | 40.0% | |
| TACACAAGAGAACGGTTTAG+GGG | + | chr1.2:18756216-18756235 | MS.gene040833:CDS | 40.0% | |
| TATGGATCAACTGATACCAG+CGG | + | chr1.2:18753487-18753506 | MS.gene040833:intron | 40.0% | |
| TGCGAGCCTCCTATTTATAT+AGG | + | chr1.2:18755948-18755967 | MS.gene040833:CDS | 40.0% | |
| TGCGTTAATTGGGATTCATC+TGG | + | chr1.2:18754897-18754916 | MS.gene040833:intron | 40.0% | |
| TTTGAGAGAGAGTGATAGAG+AGG | + | chr1.2:18755323-18755342 | MS.gene040833:intron | 40.0% | |
| ! | AGTTGTTGGTTGTGGTTAGA+TGG | - | chr1.2:18754778-18754797 | None:intergenic | 40.0% |
| ! | CGTCTAGGATTGAAAAAGGT+TGG | + | chr1.2:18753174-18753193 | MS.gene040833:CDS | 40.0% |
| ! | CTCCTTTGATTTCCTGGATT+CGG | + | chr1.2:18753416-18753435 | MS.gene040833:CDS | 40.0% |
| ! | GCATTGGCATTTCAGATTGA+AGG | + | chr1.2:18753636-18753655 | MS.gene040833:intron | 40.0% |
| ! | GGATTCCGGATAATTTTCTG+AGG | + | chr1.2:18753091-18753110 | MS.gene040833:CDS | 40.0% |
| ! | GTTGTTGGTTGTGGTTAGAT+GGG | - | chr1.2:18754777-18754796 | None:intergenic | 40.0% |
| ! | TCACGTTTTCAAATTACGGC+TGG | + | chr1.2:18753733-18753752 | MS.gene040833:intron | 40.0% |
| ! | TGAAGCTTAATGGAGGCTTT+TGG | - | chr1.2:18754840-18754859 | None:intergenic | 40.0% |
| ! | TTGTCTGAAACCCCCTATTT+GGG | + | chr1.2:18752732-18752751 | MS.gene040833:intron | 40.0% |
| ! | TTGTTGGTTGTGGTTAGATG+GGG | - | chr1.2:18754776-18754795 | None:intergenic | 40.0% |
| ! | TTTGTCTGAAACCCCCTATT+TGG | + | chr1.2:18752731-18752750 | MS.gene040833:intron | 40.0% |
| !! | GCAAATTTGAAGGGTGTTTC+AGG | + | chr1.2:18756094-18756113 | MS.gene040833:CDS | 40.0% |
| !! | GCTTTTTGGGAGTGAACAAT+TGG | + | chr1.2:18752801-18752820 | MS.gene040833:intron | 40.0% |
| !! | TATCGACTCCTTTGATTTCC+TGG | + | chr1.2:18753410-18753429 | MS.gene040833:CDS | 40.0% |
| !!! | GTATTTGTTTTGTGGATGGC+TGG | + | chr1.2:18753202-18753221 | MS.gene040833:CDS | 40.0% |
| !!! | TGGCAACCGTATTTGTTTTG+TGG | + | chr1.2:18753194-18753213 | MS.gene040833:CDS | 40.0% |
| AAACCATGTGCGCCCAAATA+GGG | - | chr1.2:18752747-18752766 | None:intergenic | 45.0% | |
| AACCAGTATAGCCGGTTATC+AGG | + | chr1.2:18755252-18755271 | MS.gene040833:intron | 45.0% | |
| AACCTGATAACCGGCTATAC+TGG | - | chr1.2:18755257-18755276 | None:intergenic | 45.0% | |
| AAGAGAACGGTTTAGGGGAA+GGG | + | chr1.2:18756221-18756240 | MS.gene040833:CDS | 45.0% | |
| AGCCTCCACTGAAAATGATG+AGG | + | chr1.2:18753866-18753885 | MS.gene040833:CDS | 45.0% | |
| ATTGATGTGTGTCAGACACC+GGG | - | chr1.2:18753666-18753685 | None:intergenic | 45.0% | |
| CAACGCTACTCAATTGGCAT+TGG | + | chr1.2:18753237-18753256 | MS.gene040833:CDS | 45.0% | |
| CAAGAAAGAAGCGGAAATCG+CGG | + | chr1.2:18753558-18753577 | MS.gene040833:intron | 45.0% | |
| CATAGAAAGGCTCTTCAGTC+CGG | - | chr1.2:18753356-18753375 | None:intergenic | 45.0% | |
| CATTGATGTGTGTCAGACAC+CGG | - | chr1.2:18753667-18753686 | None:intergenic | 45.0% | |
| CGCAGACTAACAAGACAGTA+AGG | - | chr1.2:18755932-18755951 | None:intergenic | 45.0% | |
| CTCCACTGAAAATGATGAGG+AGG | + | chr1.2:18753869-18753888 | MS.gene040833:CDS | 45.0% | |
| CTGGTATCAATGTCTCAGTG+CGG | + | chr1.2:18755664-18755683 | MS.gene040833:intron | 45.0% | |
| GACCTTTCAAATGACAGAGG+AGG | - | chr1.2:18754748-18754767 | None:intergenic | 45.0% | |
| GCAAGATTCTGCTGGATGTA+TGG | + | chr1.2:18753469-18753488 | MS.gene040833:intron | 45.0% | |
| TAAACCATGTGCGCCCAAAT+AGG | - | chr1.2:18752748-18752767 | None:intergenic | 45.0% | |
| TGCCGAATCCAGGAAATCAA+AGG | - | chr1.2:18753421-18753440 | None:intergenic | 45.0% | |
| TGCTTTGCAATGCACCAGTA+GGG | - | chr1.2:18753452-18753471 | None:intergenic | 45.0% | |
| TGTGCACAACATTAAGGCCA+AGG | - | chr1.2:18752667-18752686 | None:intergenic | 45.0% | |
| TGTTAGTGTCGCATCTGAGT+TGG | - | chr1.2:18754422-18754441 | None:intergenic | 45.0% | |
| TTGCTTTGCAATGCACCAGT+AGG | - | chr1.2:18753453-18753472 | None:intergenic | 45.0% | |
| TTTCAATCCTAGACGCCAGA+CGG | - | chr1.2:18753169-18753188 | None:intergenic | 45.0% | |
| ! | ACTCCACTGTTTCTCACCAT+CGG | - | chr1.2:18756140-18756159 | None:intergenic | 45.0% |
| ! | CACCTCCTCTGTCATTTGAA+AGG | + | chr1.2:18754743-18754762 | MS.gene040833:intron | 45.0% |
| ! | CTCCTCATCATTTTCAGTGG+AGG | - | chr1.2:18753871-18753890 | None:intergenic | 45.0% |
| ! | CTGGCGTCTAGGATTGAAAA+AGG | + | chr1.2:18753170-18753189 | MS.gene040833:CDS | 45.0% |
| ! | TCACGTTTTCAAACTACGGC+TGG | + | chr1.2:18754464-18754483 | MS.gene040833:intron | 45.0% |
| ! | TGCCTCCTCATCATTTTCAG+TGG | - | chr1.2:18753874-18753893 | None:intergenic | 45.0% |
| ! | TTTCAGATTGAAGGCATGCC+CGG | + | chr1.2:18753645-18753664 | MS.gene040833:intron | 45.0% |
| ! | TTTTCCGGCCTTTGTCATCA+AGG | - | chr1.2:18756171-18756190 | None:intergenic | 45.0% |
| !! | TATTTAAACTTAAATTAATA+AGG | - | chr1.2:18752880-18752899 | None:intergenic | 5.0% |
| AACCATGTGCGCCCAAATAG+GGG | - | chr1.2:18752746-18752765 | None:intergenic | 50.0% | |
| AGAGAACGGTTTAGGGGAAG+GGG | + | chr1.2:18756222-18756241 | MS.gene040833:CDS | 50.0% | |
| AGATGCGACACTAACACGTG+TGG | + | chr1.2:18754426-18754445 | MS.gene040833:intron | 50.0% | |
| ATTAGAGCAGTGCTAGCGTC+AGG | + | chr1.2:18754556-18754575 | MS.gene040833:intron | 50.0% | |
| ATTCCGCTTCAGACATCCGA+TGG | + | chr1.2:18756121-18756140 | MS.gene040833:CDS | 50.0% | |
| ATTGATGCGTGTCAGACACC+GGG | - | chr1.2:18755578-18755597 | None:intergenic | 50.0% | |
| CAAGAGAACGGTTTAGGGGA+AGG | + | chr1.2:18756220-18756239 | MS.gene040833:CDS | 50.0% | |
| CAGACACAACACTGAGACGT+TGG | - | chr1.2:18753761-18753780 | None:intergenic | 50.0% | |
| CAGACACGACACTGAGACAT+TGG | - | chr1.2:18754492-18754511 | None:intergenic | 50.0% | |
| CAGTTGCGACAGTCGAAAGT+TGG | - | chr1.2:18753128-18753147 | None:intergenic | 50.0% | |
| CATCCGATGGTGAGAAACAG+TGG | + | chr1.2:18756134-18756153 | MS.gene040833:CDS | 50.0% | |
| CATTGATGCGTGTCAGACAC+CGG | - | chr1.2:18755579-18755598 | None:intergenic | 50.0% | |
| GCAACTGTCACTATTCCTGG+CGG | + | chr1.2:18753141-18753160 | MS.gene040833:CDS | 50.0% | |
| GGCCGGAAAAAGTTAAGCCA+AGG | + | chr1.2:18756181-18756200 | MS.gene040833:CDS | 50.0% | |
| GTCGCAACTGTCACTATTCC+TGG | + | chr1.2:18753138-18753157 | MS.gene040833:CDS | 50.0% | |
| TCACCATCGGATGTCTGAAG+CGG | - | chr1.2:18756127-18756146 | None:intergenic | 50.0% | |
| TCGGCACTTTCAAACCCTAC+TGG | + | chr1.2:18753435-18753454 | MS.gene040833:CDS | 50.0% | |
| TCTTGCAGACGCACGTTCAT+AGG | - | chr1.2:18755837-18755856 | None:intergenic | 50.0% | |
| TGGTCCACTCAAAGAGAGAG+TGG | - | chr1.2:18754603-18754622 | None:intergenic | 50.0% | |
| TGTTAGTGTCGCGTCTGAGT+TGG | - | chr1.2:18753691-18753710 | None:intergenic | 50.0% | |
| ! | GTTCGCTGCCTTGATGACAA+AGG | + | chr1.2:18756160-18756179 | MS.gene040833:CDS | 50.0% |
| ! | TGTTGGCTATGATTCTCCGC+TGG | - | chr1.2:18753506-18753525 | None:intergenic | 50.0% |
| !! | GGTTTGAAAGTGCCGAATCC+AGG | - | chr1.2:18753431-18753450 | None:intergenic | 50.0% |
| ACCATGTGCGCCCAAATAGG+GGG | - | chr1.2:18752745-18752764 | None:intergenic | 55.0% | |
| AGACGCGACACTAACACGTG+TGG | + | chr1.2:18753695-18753714 | MS.gene040833:intron | 55.0% | |
| CAGACACGACACTGAGACGT+TGG | - | chr1.2:18754125-18754144 | None:intergenic | 55.0% | |
| TTGTGGAACTGCAGGTGCAC+AGG | + | chr1.2:18753842-18753861 | MS.gene040833:intron | 55.0% | |
| ! | GCTGCCTTGATGACAAAGGC+CGG | + | chr1.2:18756164-18756183 | MS.gene040833:CDS | 55.0% |
| !! | TAACGCGGTGCTGCAAGTGA+GGG | - | chr1.2:18756325-18756344 | None:intergenic | 55.0% |
| ACCCCCTATTTGGGCGCACA+TGG | + | chr1.2:18752741-18752760 | MS.gene040833:intron | 60.0% | |
| GCCTTGCGGCCAGAAATCCT+TGG | + | chr1.2:18752647-18752666 | MS.gene040833:CDS | 60.0% | |
| !! | CTAACGCGGTGCTGCAAGTG+AGG | - | chr1.2:18756326-18756345 | None:intergenic | 60.0% |
| !! | GCCAAGGATTTCTGGCCGCA+AGG | - | chr1.2:18752651-18752670 | None:intergenic | 60.0% |
| CTATTCCTGGCGGCACCGTC+TGG | + | chr1.2:18753151-18753170 | MS.gene040833:CDS | 65.0% | |
| GGCGGCACCGTCTGGCGTCT+AGG | + | chr1.2:18753159-18753178 | MS.gene040833:CDS | 75.0% | |
| !! | AGACGCCAGACGGTGCCGCC+AGG | - | chr1.2:18753159-18753178 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 18752638 | 18756345 | 18752638 | ID=MS.gene040833 |
| chr1.2 | mRNA | 18752638 | 18756345 | 18752638 | ID=MS.gene040833.t1;Parent=MS.gene040833 |
| chr1.2 | exon | 18752638 | 18752697 | 18752638 | ID=MS.gene040833.t1.exon1;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18752638 | 18752697 | 18752638 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18753090 | 18753456 | 18753090 | ID=MS.gene040833.t1.exon2;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18753090 | 18753456 | 18753090 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18753856 | 18753957 | 18753856 | ID=MS.gene040833.t1.exon3;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18753856 | 18753957 | 18753856 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18754232 | 18754324 | 18754232 | ID=MS.gene040833.t1.exon4;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18754232 | 18754324 | 18754232 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18755404 | 18755505 | 18755404 | ID=MS.gene040833.t1.exon5;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18755404 | 18755505 | 18755404 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18755768 | 18755982 | 18755768 | ID=MS.gene040833.t1.exon6;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18755768 | 18755982 | 18755768 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| chr1.2 | exon | 18756073 | 18756345 | 18756073 | ID=MS.gene040833.t1.exon7;Parent=MS.gene040833.t1 |
| chr1.2 | CDS | 18756073 | 18756345 | 18756073 | ID=cds.MS.gene040833.t1;Parent=MS.gene040833.t1 |
| Gene Sequence |
| Protein sequence |
