Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041062.t1 | RHN57311.1 | 75 | 504 | 82 | 4 | 76 | 537 | 457 | 958 | 6.30E-218 | 766.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041062.t1 | Q9FWQ5 | 40.9 | 543 | 216 | 8 | 102 | 545 | 1156 | 1692 | 1.3e-115 | 418.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041062.t1 | A0A396HXK4 | 75.0 | 504 | 82 | 4 | 76 | 537 | 457 | 958 | 4.5e-218 | 766.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041062.t1 | TR | TAZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041062.t1 | MTR_5g085310 | 77.228 | 505 | 70 | 4 | 76 | 537 | 523 | 1025 | 0.0 | 798 |
| MS.gene041062.t1 | MTR_5g085310 | 56.000 | 75 | 25 | 1 | 1 | 75 | 1 | 67 | 1.95e-16 | 83.6 |
| MS.gene041062.t1 | MTR_6g017010 | 73.996 | 523 | 82 | 5 | 74 | 553 | 258 | 769 | 0.0 | 776 |
| MS.gene041062.t1 | MTR_3g107960 | 66.842 | 570 | 95 | 6 | 76 | 553 | 639 | 1206 | 0.0 | 753 |
| MS.gene041062.t1 | MTR_3g107960 | 55.072 | 69 | 26 | 1 | 1 | 64 | 1 | 69 | 3.66e-18 | 89.0 |
| MS.gene041062.t1 | MTR_3g101100 | 65.753 | 584 | 92 | 7 | 76 | 553 | 814 | 1395 | 0.0 | 750 |
| MS.gene041062.t1 | MTR_3g101100 | 67.188 | 64 | 21 | 0 | 1 | 64 | 1 | 64 | 3.51e-22 | 101 |
| MS.gene041062.t1 | MTR_5g017020 | 62.416 | 596 | 78 | 9 | 16 | 553 | 53 | 560 | 0.0 | 653 |
| MS.gene041062.t1 | MTR_5g017020 | 67.573 | 515 | 67 | 7 | 16 | 472 | 53 | 525 | 0.0 | 635 |
| MS.gene041062.t1 | MTR_6g017000 | 61.880 | 383 | 112 | 3 | 76 | 424 | 557 | 939 | 3.99e-159 | 478 |
| MS.gene041062.t1 | MTR_6g017140 | 56.389 | 360 | 106 | 3 | 76 | 400 | 110 | 453 | 6.50e-137 | 405 |
| MS.gene041062.t1 | MTR_4g005050 | 41.197 | 568 | 230 | 8 | 76 | 545 | 1134 | 1695 | 1.35e-133 | 426 |
| MS.gene041062.t1 | MTR_0299s0030 | 76.582 | 158 | 33 | 1 | 267 | 424 | 146 | 299 | 7.03e-77 | 246 |
| MS.gene041062.t1 | MTR_6g017130 | 59.162 | 191 | 28 | 4 | 346 | 535 | 249 | 390 | 4.02e-61 | 207 |
| MS.gene041062.t1 | MTR_5g085317 | 79.787 | 94 | 19 | 0 | 210 | 303 | 1 | 94 | 7.09e-46 | 157 |
| MS.gene041062.t1 | MTR_6g017120 | 55.479 | 146 | 56 | 4 | 123 | 265 | 4 | 143 | 1.27e-42 | 150 |
| MS.gene041062.t1 | MTR_1g047940 | 52.000 | 175 | 37 | 5 | 369 | 543 | 71 | 198 | 1.12e-41 | 149 |
| MS.gene041062.t1 | MTR_1g047940 | 59.740 | 77 | 26 | 1 | 206 | 282 | 4 | 75 | 2.17e-22 | 95.5 |
| MS.gene041062.t1 | MTR_1g047930 | 52.632 | 114 | 38 | 3 | 51 | 162 | 261 | 360 | 6.11e-25 | 107 |
| MS.gene041062.t1 | MTR_6g017135 | 52.475 | 101 | 17 | 2 | 87 | 157 | 2 | 101 | 1.25e-22 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041062.t1 | AT1G79000 | 41.125 | 569 | 230 | 9 | 76 | 545 | 1097 | 1659 | 1.01e-137 | 437 |
| MS.gene041062.t1 | AT1G79000 | 41.125 | 569 | 230 | 9 | 76 | 545 | 1121 | 1683 | 1.53e-137 | 437 |
| MS.gene041062.t1 | AT1G79000 | 41.125 | 569 | 230 | 9 | 76 | 545 | 1121 | 1683 | 2.38e-137 | 437 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1117 | 1663 | 1.41e-134 | 429 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1081 | 1627 | 1.71e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1081 | 1627 | 1.71e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1081 | 1627 | 1.71e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1120 | 1666 | 1.85e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1120 | 1666 | 1.85e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1120 | 1666 | 1.85e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1120 | 1666 | 1.85e-134 | 428 |
| MS.gene041062.t1 | AT1G16710 | 41.049 | 553 | 221 | 10 | 92 | 545 | 1146 | 1692 | 2.62e-134 | 428 |
| MS.gene041062.t1 | AT3G12980 | 42.021 | 564 | 224 | 9 | 76 | 545 | 1020 | 1574 | 2.78e-134 | 427 |
| MS.gene041062.t1 | AT3G12980 | 42.021 | 564 | 224 | 9 | 76 | 545 | 1101 | 1655 | 3.18e-134 | 427 |
| MS.gene041062.t1 | AT1G55970 | 48.571 | 385 | 166 | 7 | 76 | 429 | 896 | 1279 | 2.28e-113 | 368 |
| MS.gene041062.t1 | AT1G55970 | 43.358 | 399 | 180 | 6 | 76 | 429 | 896 | 1293 | 4.80e-102 | 337 |
| MS.gene041062.t1 | AT1G67220 | 35.978 | 542 | 248 | 11 | 77 | 523 | 821 | 1358 | 6.88e-100 | 330 |
| MS.gene041062.t1 | AT1G16710 | 46.179 | 301 | 124 | 5 | 92 | 355 | 1120 | 1419 | 1.47e-83 | 284 |
Find 94 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACTTTGTCCTTCTTTC+AGG | 0.073241 | 5.2:+9190062 | None:intergenic |
| TTCTTTCTTCCTACTGAAAA+AGG | 0.113508 | 5.2:-9189593 | MS.gene041062:CDS |
| TCCTGGTAGGCAATATATTT+TGG | 0.160964 | 5.2:+9189210 | None:intergenic |
| AGAGTAGATTGTTTGGAAAT+AGG | 0.201852 | 5.2:-9188792 | MS.gene041062:CDS |
| GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 5.2:-9190410 | MS.gene041062:CDS |
| GAGTAGATTGTTTGGAAATA+GGG | 0.235125 | 5.2:-9188791 | MS.gene041062:CDS |
| CTTACTAAGGGTTGTTATAT+TGG | 0.244244 | 5.2:-9192368 | MS.gene041062:CDS |
| CACTGAATGCAAGAAATTTC+AGG | 0.254650 | 5.2:-9189108 | MS.gene041062:CDS |
| TTCCGAGTCTTTGCAATTCC+TGG | 0.259668 | 5.2:+9188300 | None:intergenic |
| AAATTGTGTACAACCGTAAT+TGG | 0.278809 | 5.2:-9192220 | MS.gene041062:CDS |
| TCGAATTACTGCAAAATTGC+AGG | 0.322778 | 5.2:-9190488 | MS.gene041062:CDS |
| CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 5.2:-9190024 | MS.gene041062:intron |
| TTGCATCACCAGAGTCTCTT+TGG | 0.327824 | 5.2:+9189400 | None:intergenic |
| TTGCCGTAGAGCTGAAGTTT+TGG | 0.336259 | 5.2:-9188042 | MS.gene041062:CDS |
| TAATCATCCCCTTTCTTTGA+AGG | 0.345904 | 5.2:+9189833 | None:intergenic |
| CTTCTGTTTAAGCTGATTGA+AGG | 0.363488 | 5.2:-9190198 | MS.gene041062:CDS |
| AGTGTCAAATAGAACATTAA+AGG | 0.370702 | 5.2:-9189444 | MS.gene041062:CDS |
| GTTTCTCAACTTGCTACATA+TGG | 0.388170 | 5.2:-9189865 | MS.gene041062:CDS |
| GTCCTTGAGAGTAGATTGTT+TGG | 0.389989 | 5.2:-9188799 | MS.gene041062:CDS |
| CAGCAGTCTCCTTCAAAGTA+TGG | 0.394018 | 5.2:+9189542 | None:intergenic |
| AAGTGTGTTGATCATAACTA+TGG | 0.394998 | 5.2:+9188981 | None:intergenic |
| TCTTCAAAACATCTCTTTCG+TGG | 0.398197 | 5.2:+9192290 | None:intergenic |
| GTTATATTGGTGCGAATACT+TGG | 0.405425 | 5.2:-9192355 | MS.gene041062:CDS |
| ATGCATCTCAATGCCGCCGC+CGG | 0.412185 | 5.2:-9188462 | MS.gene041062:CDS |
| TCGCATTAGGATTGTGTAGA+TGG | 0.417229 | 5.2:+9188683 | None:intergenic |
| ATAACTGATGAAGAATGTTT+TGG | 0.417678 | 5.2:+9192323 | None:intergenic |
| CAGCATTACTTGCCCGGCGG+CGG | 0.424812 | 5.2:+9188449 | None:intergenic |
| CAGAGTCTCTTTGGAAGGCT+TGG | 0.425209 | 5.2:+9189409 | None:intergenic |
| TTTCGTTTGCCATACTTTGA+AGG | 0.426623 | 5.2:-9189551 | MS.gene041062:CDS |
| TTTCAGTAGGAAGAAAGAAA+TGG | 0.429433 | 5.2:+9189597 | None:intergenic |
| TCAGCAGGGTAATTCTCCTC+TGG | 0.435068 | 5.2:+9190379 | None:intergenic |
| TGCATCTCAATGCCGCCGCC+GGG | 0.437980 | 5.2:-9188461 | MS.gene041062:CDS |
| CGGCGTAGCTTATCATTCTT+CGG | 0.441625 | 5.2:+9189776 | None:intergenic |
| ATCATTATGTTTAGTGTTGG+AGG | 0.449050 | 5.2:+9188825 | None:intergenic |
| TGCCGTGAAGTGATAGTGTC+TGG | 0.465307 | 5.2:-9189146 | MS.gene041062:CDS |
| CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 5.2:+9188749 | None:intergenic |
| AATATCATTATGTTTAGTGT+TGG | 0.474871 | 5.2:+9188822 | None:intergenic |
| GATCTATAAGAGAATTCAGC+AGG | 0.480043 | 5.2:+9190364 | None:intergenic |
| AAGCGAGAAGATGCTTACTA+AGG | 0.483446 | 5.2:-9192381 | None:intergenic |
| TGAGGTGCATACACTTTGTC+AGG | 0.483949 | 5.2:-9188948 | MS.gene041062:intron |
| CTTGTGCTCCTTCAAAGAAA+GGG | 0.487599 | 5.2:-9189841 | MS.gene041062:CDS |
| ATGGCTCAGCATTACTTGCC+CGG | 0.490163 | 5.2:+9188443 | None:intergenic |
| AAAGAAATGGTCATGTATGT+TGG | 0.496652 | 5.2:+9189610 | None:intergenic |
| TCCCAGACACTATCACTTCA+CGG | 0.498199 | 5.2:+9189144 | None:intergenic |
| ACCGAAGAAAATATTGTCGT+TGG | 0.500600 | 5.2:-9189638 | MS.gene041062:CDS |
| ACTTGTGCTCCTTCAAAGAA+AGG | 0.504368 | 5.2:-9189842 | MS.gene041062:CDS |
| CATTATGTTTAGTGTTGGAG+GGG | 0.505283 | 5.2:+9188827 | None:intergenic |
| GATCAACACACTTCAAAGAA+TGG | 0.512393 | 5.2:-9188971 | MS.gene041062:CDS |
| GTGCAAAATTCGATTAAATG+AGG | 0.513828 | 5.2:-9188368 | MS.gene041062:CDS |
| CTCCAGGAATTGCAAAGACT+CGG | 0.514621 | 5.2:-9188302 | MS.gene041062:CDS |
| TCATTATGTTTAGTGTTGGA+GGG | 0.517970 | 5.2:+9188826 | None:intergenic |
| AATCATCATAGAGGAATACT+TGG | 0.522130 | 5.2:+9188711 | None:intergenic |
| ATCACCAGAGTCTCTTTGGA+AGG | 0.522915 | 5.2:+9189404 | None:intergenic |
| GCCAAAATATATTGCCTACC+AGG | 0.524384 | 5.2:-9189211 | MS.gene041062:CDS |
| CAGCAGGGTAATTCTCCTCT+GGG | 0.526093 | 5.2:+9190380 | None:intergenic |
| GCACTGATTTCTGTTCTACA+TGG | 0.527594 | 5.2:+9188075 | None:intergenic |
| CAAGCCTTCCAAAGAGACTC+TGG | 0.527624 | 5.2:-9189408 | MS.gene041062:CDS |
| AGAAATTTCAGGAGTGTGAA+AGG | 0.528641 | 5.2:-9189097 | MS.gene041062:intron |
| TGCAAAATTCGATTAAATGA+GGG | 0.532824 | 5.2:-9188367 | MS.gene041062:CDS |
| CTGCTGGTGTGGTAATGCTA+TGG | 0.533073 | 5.2:-9189525 | MS.gene041062:CDS |
| GAAGAATTAAGCTATCAAGT+AGG | 0.533542 | 5.2:-9192272 | MS.gene041062:CDS |
| TTTCCAAAACTTCAGCTCTA+CGG | 0.533760 | 5.2:+9188039 | None:intergenic |
| AATGTAGAATACCACGCTGC+AGG | 0.540083 | 5.2:-9188279 | MS.gene041062:intron |
| TTATACTAACTTCTCACTCC+AGG | 0.540435 | 5.2:-9188318 | MS.gene041062:CDS |
| GAAAGCGATGGAGCAATCGT+TGG | 0.563087 | 5.2:-9188020 | MS.gene041062:CDS |
| AGCGAGAAGATGCTTACTAA+GGG | 0.568051 | 5.2:-9192380 | None:intergenic |
| TTCCAAACAATCTACTCTCA+AGG | 0.576903 | 5.2:+9188797 | None:intergenic |
| AAATAGAACATTAAAGGACA+TGG | 0.581441 | 5.2:-9189438 | MS.gene041062:CDS |
| CAAACGAAAAGCTGTCACCT+TGG | 0.585482 | 5.2:+9189565 | None:intergenic |
| TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 5.2:-9189136 | MS.gene041062:CDS |
| AGAATGATAAGCTACGCCGC+TGG | 0.596059 | 5.2:-9189772 | MS.gene041062:intron |
| CATACTTTGAAGGAGACTGC+TGG | 0.599995 | 5.2:-9189541 | MS.gene041062:CDS |
| AAGTAGGATTCTCCACAGAC+TGG | 0.600517 | 5.2:-9192256 | MS.gene041062:CDS |
| AGAATGATACCGCCAGTCTG+TGG | 0.610785 | 5.2:+9192244 | None:intergenic |
| AATATTGCAAGTGAGCTATG+AGG | 0.614269 | 5.2:+9189180 | None:intergenic |
| TTGTGCTCCTTCAAAGAAAG+GGG | 0.614669 | 5.2:-9189840 | MS.gene041062:CDS |
| CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 5.2:+9190033 | None:intergenic |
| AATAGAACATTAAAGGACAT+GGG | 0.630593 | 5.2:-9189437 | MS.gene041062:CDS |
| ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 5.2:+9190034 | None:intergenic |
| TTTGAAGGAGACTGCTGGTG+TGG | 0.637044 | 5.2:-9189536 | MS.gene041062:CDS |
| CCTGAAAGAAGGACAAAGTG+TGG | 0.639771 | 5.2:-9190062 | MS.gene041062:CDS |
| GCCGTGAAGTGATAGTGTCT+GGG | 0.641094 | 5.2:-9189145 | MS.gene041062:CDS |
| CAATATCTCATGGTAAACGA+AGG | 0.666016 | 5.2:+9190025 | None:intergenic |
| TAGGATTCTCCACAGACTGG+CGG | 0.666878 | 5.2:-9192253 | MS.gene041062:CDS |
| TAGAGGAATACTTGGCACGA+CGG | 0.668087 | 5.2:+9188719 | None:intergenic |
| GAACAGTGTGGATGAGAGCA+TGG | 0.670326 | 5.2:+9188424 | None:intergenic |
| ATCTATAAGAGAATTCAGCA+GGG | 0.680316 | 5.2:+9190365 | None:intergenic |
| ACACACTTCAAAGAATGGTG+AGG | 0.703040 | 5.2:-9188966 | MS.gene041062:CDS |
| GGAGGGGATATCATCAACAA+CGG | 0.711543 | 5.2:+9188843 | None:intergenic |
| GCTCAGCATTACTTGCCCGG+CGG | 0.716635 | 5.2:+9188446 | None:intergenic |
| ATGGTAGAGAATCATCATAG+AGG | 0.733865 | 5.2:+9188702 | None:intergenic |
| ATTGTAACACACCTGCAGCG+TGG | 0.738381 | 5.2:+9188268 | None:intergenic |
| GTTTCTGGACATCATCCCAG+AGG | 0.751856 | 5.2:-9190395 | MS.gene041062:CDS |
| TTCTTGATTTGAGAACAGTG+TGG | 0.765310 | 5.2:+9188412 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAACAATATAAAAATA+AGG | + | chr5.2:9190695-9190714 | None:intergenic | 10.0% |
| !!! | AAAAAGATCAATAATTTTAA+GGG | + | chr5.2:9189826-9189845 | None:intergenic | 10.0% |
| !!! | AACATCATTTATTTTATTTG+AGG | + | chr5.2:9188639-9188658 | None:intergenic | 15.0% |
| !!! | GAAAAAGATCAATAATTTTA+AGG | + | chr5.2:9189827-9189846 | None:intergenic | 15.0% |
| !!! | GTTCATTTTATTAGTTTTAT+TGG | + | chr5.2:9190414-9190433 | None:intergenic | 15.0% |
| !!! | TTCTTTTTAAATAACATACT+AGG | + | chr5.2:9189105-9189124 | None:intergenic | 15.0% |
| !! | AATATCATTATGTTTAGTGT+TGG | + | chr5.2:9191565-9191584 | None:intergenic | 20.0% |
| !! | ATCAATGTATTTAAAAACAC+AGG | + | chr5.2:9188753-9188772 | None:intergenic | 20.0% |
| !! | GTGATTTATCAATGAATAAA+TGG | - | chr5.2:9190056-9190075 | MS.gene041062:CDS | 20.0% |
| !! | TTAAATACATTGATCTGTTT+AGG | - | chr5.2:9188759-9188778 | MS.gene041062:CDS | 20.0% |
| !! | TTCATTTACTCAAGTATAAA+AGG | + | chr5.2:9191045-9191064 | None:intergenic | 20.0% |
| !! | TTTAAATAACATACTAGGAA+GGG | + | chr5.2:9189100-9189119 | None:intergenic | 20.0% |
| !! | TTTATATTGTTTGTTTATGC+AGG | - | chr5.2:9190699-9190718 | MS.gene041062:intron | 20.0% |
| !!! | AAAACAGAGTCATTTTTTTT+TGG | - | chr5.2:9192228-9192247 | MS.gene041062:CDS | 20.0% |
| !!! | AACTTAAACTAGTCTATAAT+AGG | + | chr5.2:9191081-9191100 | None:intergenic | 20.0% |
| !!! | AGCATTGAATGAAATAAAAA+GGG | - | chr5.2:9191343-9191362 | MS.gene041062:intron | 20.0% |
| !!! | ATTTATTTTATTTGAGGATG+TGG | + | chr5.2:9188633-9188652 | None:intergenic | 20.0% |
| !!! | TAGCATTGAATGAAATAAAA+AGG | - | chr5.2:9191342-9191361 | MS.gene041062:intron | 20.0% |
| !!! | TTCCATTTTCAATTTCTTTT+TGG | + | chr5.2:9189542-9189561 | None:intergenic | 20.0% |
| !!! | TTTTAAATAACATACTAGGA+AGG | + | chr5.2:9189101-9189120 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTTATCCAATTA+CGG | + | chr5.2:9188180-9188199 | None:intergenic | 20.0% |
| ! | AAATAGAACATTAAAGGACA+TGG | - | chr5.2:9190946-9190965 | MS.gene041062:intron | 25.0% |
| ! | AATAGAACATTAAAGGACAT+GGG | - | chr5.2:9190947-9190966 | MS.gene041062:intron | 25.0% |
| ! | AATAGCAATATTTCCACAAT+AGG | + | chr5.2:9188274-9188293 | None:intergenic | 25.0% |
| ! | AATCAAATGCTTAAAAGAAG+AGG | + | chr5.2:9188795-9188814 | None:intergenic | 25.0% |
| ! | AATCTATAAAAGAATTCAGC+AGG | + | chr5.2:9189281-9189300 | None:intergenic | 25.0% |
| ! | AATTCAATGGAAATTGACAT+CGG | - | chr5.2:9188463-9188482 | MS.gene041062:CDS | 25.0% |
| ! | AATTCATGTTTGTAAGCATT+TGG | - | chr5.2:9188821-9188840 | MS.gene041062:CDS | 25.0% |
| ! | AATTTCAGACTACTATTGAT+CGG | + | chr5.2:9189051-9189070 | None:intergenic | 25.0% |
| ! | AGAAAAATACCAATATCTCA+TGG | + | chr5.2:9190372-9190391 | None:intergenic | 25.0% |
| ! | AGTGTCAAATAGAACATTAA+AGG | - | chr5.2:9190940-9190959 | MS.gene041062:intron | 25.0% |
| ! | ATAGAATATCGAAATTCTCT+AGG | + | chr5.2:9192157-9192176 | None:intergenic | 25.0% |
| ! | ATCTATAAAAGAATTCAGCA+GGG | + | chr5.2:9189280-9189299 | None:intergenic | 25.0% |
| ! | ATGTATTTAAAAACACAGGA+AGG | + | chr5.2:9188749-9188768 | None:intergenic | 25.0% |
| ! | ATGTTTGGTTATTTGATCAT+GGG | + | chr5.2:9188684-9188703 | None:intergenic | 25.0% |
| ! | CACCAAAAAGAAATTGAAAA+TGG | - | chr5.2:9189537-9189556 | MS.gene041062:CDS | 25.0% |
| ! | CATATGAAATGAAAAACTTC+AGG | + | chr5.2:9191474-9191493 | None:intergenic | 25.0% |
| ! | GAGAACTTCTATTAAATGTT+TGG | + | chr5.2:9190150-9190169 | None:intergenic | 25.0% |
| ! | TAAAGCATAAAAAGAGAGAA+TGG | + | chr5.2:9190448-9190467 | None:intergenic | 25.0% |
| ! | TATAAAAGGATATATCCCAT+TGG | + | chr5.2:9191031-9191050 | None:intergenic | 25.0% |
| ! | TATGTTTGGTTATTTGATCA+TGG | + | chr5.2:9188685-9188704 | None:intergenic | 25.0% |
| ! | TGCAAAATTCGATTAAATGA+GGG | - | chr5.2:9192017-9192036 | MS.gene041062:intron | 25.0% |
| ! | TTTCAGACTTCAAATATGTT+TGG | + | chr5.2:9188699-9188718 | None:intergenic | 25.0% |
| !! | AAATGAAAAACTTCAGGTTT+AGG | + | chr5.2:9191468-9191487 | None:intergenic | 25.0% |
| !! | AAGCATTTGGTTTATAACAT+AGG | - | chr5.2:9188867-9188886 | MS.gene041062:intron | 25.0% |
| !! | ACCTTGATTTTTGTAACAAA+AGG | - | chr5.2:9190495-9190514 | MS.gene041062:CDS | 25.0% |
| !! | ATAACTGATGAAGAATGTTT+TGG | + | chr5.2:9188064-9188083 | None:intergenic | 25.0% |
| !! | CATTTTCAATTTCTTTTTGG+TGG | + | chr5.2:9189539-9189558 | None:intergenic | 25.0% |
| !! | CCTTGATTTTTGTAACAAAA+GGG | - | chr5.2:9190496-9190515 | MS.gene041062:CDS | 25.0% |
| !! | CTTGATTTTTGTAACAAAAG+GGG | - | chr5.2:9190497-9190516 | MS.gene041062:CDS | 25.0% |
| !!! | AAAAAGTGTCAACTTGTATA+TGG | + | chr5.2:9188928-9188947 | None:intergenic | 25.0% |
| !!! | TCAATAATTTTAAGGGAACA+TGG | + | chr5.2:9189819-9189838 | None:intergenic | 25.0% |
| AAAACTGGGAAAAAGTTGAA+GGG | - | chr5.2:9189671-9189690 | MS.gene041062:intron | 30.0% | |
| AAAGAAATGGTCATGTATGT+TGG | + | chr5.2:9190777-9190796 | None:intergenic | 30.0% | |
| AAATTGTGTACAACCGTAAT+TGG | - | chr5.2:9188164-9188183 | MS.gene041062:intron | 30.0% | |
| AATAGAGTAGACATCAAACT+TGG | + | chr5.2:9189334-9189353 | None:intergenic | 30.0% | |
| AATCATCATAGAGGAATACT+TGG | + | chr5.2:9191676-9191695 | None:intergenic | 30.0% | |
| AGAGTAGATTGTTTGGAAAT+AGG | - | chr5.2:9191592-9191611 | MS.gene041062:intron | 30.0% | |
| ATAGAAGTTCTCTTGATTTC+AGG | - | chr5.2:9190158-9190177 | MS.gene041062:intron | 30.0% | |
| ATCTATAAGAGAATTCAGCA+GGG | + | chr5.2:9190022-9190041 | None:intergenic | 30.0% | |
| ATTCATGTTGTCTAAGCATT+TGG | - | chr5.2:9188854-9188873 | MS.gene041062:intron | 30.0% | |
| CGGACTGATAGTTATATAAA+AGG | + | chr5.2:9189031-9189050 | None:intergenic | 30.0% | |
| CTTACTAAGGGTTGTTATAT+TGG | - | chr5.2:9188016-9188035 | MS.gene041062:CDS | 30.0% | |
| GAAGAATTAAGCTATCAAGT+AGG | - | chr5.2:9188112-9188131 | MS.gene041062:intron | 30.0% | |
| GAATTTAATTCAACCAGTAG+GGG | - | chr5.2:9188557-9188576 | MS.gene041062:intron | 30.0% | |
| GAGTAGATTGTTTGGAAATA+GGG | - | chr5.2:9191593-9191612 | MS.gene041062:intron | 30.0% | |
| GGAAAGATCTTGAAATACAT+GGG | - | chr5.2:9188428-9188447 | MS.gene041062:CDS | 30.0% | |
| GGAATTTAATTCAACCAGTA+GGG | - | chr5.2:9188556-9188575 | MS.gene041062:intron | 30.0% | |
| GTGCAAAATTCGATTAAATG+AGG | - | chr5.2:9192016-9192035 | MS.gene041062:intron | 30.0% | |
| TATTTAAAAACACAGGAAGG+TGG | + | chr5.2:9188746-9188765 | None:intergenic | 30.0% | |
| TCTTTCTTCCTACTGAAAAA+GGG | - | chr5.2:9190792-9190811 | MS.gene041062:intron | 30.0% | |
| TTCTTTCTTCCTACTGAAAA+AGG | - | chr5.2:9190791-9190810 | MS.gene041062:intron | 30.0% | |
| TTTCAGTAGGAAGAAAGAAA+TGG | + | chr5.2:9190790-9190809 | None:intergenic | 30.0% | |
| ! | AAGTGTGTTGATCATAACTA+TGG | + | chr5.2:9191406-9191425 | None:intergenic | 30.0% |
| ! | ACCAACGACAATATTTTCTT+CGG | + | chr5.2:9190750-9190769 | None:intergenic | 30.0% |
| ! | ACCATATCTTTTTACAATGC+TGG | + | chr5.2:9192046-9192065 | None:intergenic | 30.0% |
| ! | ATCATTATGTTTAGTGTTGG+AGG | + | chr5.2:9191562-9191581 | None:intergenic | 30.0% |
| ! | CCCTTTTGTTACAAAAATCA+AGG | + | chr5.2:9190499-9190518 | None:intergenic | 30.0% |
| ! | TATGATCAACAATCTAGCTT+AGG | + | chr5.2:9191855-9191874 | None:intergenic | 30.0% |
| ! | TCATTATGTTTAGTGTTGGA+GGG | + | chr5.2:9191561-9191580 | None:intergenic | 30.0% |
| ! | TTGATTCCGTCAAGTATTTT+AGG | - | chr5.2:9190299-9190318 | MS.gene041062:intron | 30.0% |
| ! | TTTTTAACAGAGTTCAACTG+CGG | - | chr5.2:9188948-9188967 | MS.gene041062:intron | 30.0% |
| !! | TATTGATGATGATGTTGAAC+AGG | - | chr5.2:9188342-9188361 | MS.gene041062:CDS | 30.0% |
| !!! | ATGACTGTTTTTTCTTCTAG+TGG | - | chr5.2:9189421-9189440 | MS.gene041062:CDS | 30.0% |
| !!! | TGACTGTTTTTTCTTCTAGT+GGG | - | chr5.2:9189422-9189441 | MS.gene041062:CDS | 30.0% |
| !!! | TTGAACAGTTTTGAGTTAAC+TGG | + | chr5.2:9191743-9191762 | None:intergenic | 30.0% |
| AAGTTAGGGGGAAAAAGAAA+AGG | + | chr5.2:9191142-9191161 | None:intergenic | 35.0% | |
| AATATTGCAAGTGAGCTATG+AGG | + | chr5.2:9191207-9191226 | None:intergenic | 35.0% | |
| ACATTGATCTGTTTAGGCAT+TGG | - | chr5.2:9188765-9188784 | MS.gene041062:CDS | 35.0% | |
| ACCGAAGAAAATATTGTCGT+TGG | - | chr5.2:9190746-9190765 | MS.gene041062:intron | 35.0% | |
| AGAGTAGTATTTAGTCAGGA+GGG | - | chr5.2:9188376-9188395 | MS.gene041062:CDS | 35.0% | |
| AGTATGTCAATCTGAGAATC+AGG | - | chr5.2:9191767-9191786 | MS.gene041062:intron | 35.0% | |
| AGTTGCTCAAAAGATATCAG+AGG | - | chr5.2:9188402-9188421 | MS.gene041062:CDS | 35.0% | |
| ATGGTAGAGAATCATCATAG+AGG | + | chr5.2:9191685-9191704 | None:intergenic | 35.0% | |
| ATGTCTATCTTGTCATCCAA+TGG | - | chr5.2:9191012-9191031 | MS.gene041062:intron | 35.0% | |
| CAATATCTCATGGTAAACGA+AGG | + | chr5.2:9190362-9190381 | None:intergenic | 35.0% | |
| CACTGAATGCAAGAAATTTC+AGG | - | chr5.2:9191276-9191295 | MS.gene041062:intron | 35.0% | |
| CGGAATTTAATTCAACCAGT+AGG | - | chr5.2:9188555-9188574 | MS.gene041062:intron | 35.0% | |
| CTTCGTTTACCATGAGATAT+TGG | - | chr5.2:9190360-9190379 | MS.gene041062:CDS | 35.0% | |
| CTTCTGTTTAAGCTGATTGA+AGG | - | chr5.2:9190186-9190205 | MS.gene041062:CDS | 35.0% | |
| GAAAACTGGGAAAAAGTTGA+AGG | - | chr5.2:9189670-9189689 | MS.gene041062:intron | 35.0% | |
| GAAAGTGAATAAGCAGTTTC+TGG | - | chr5.2:9189974-9189993 | MS.gene041062:intron | 35.0% | |
| GATCAACACACTTCAAAGAA+TGG | - | chr5.2:9191413-9191432 | MS.gene041062:intron | 35.0% | |
| GATCTATAAGAGAATTCAGC+AGG | + | chr5.2:9190023-9190042 | None:intergenic | 35.0% | |
| GATGACAGACAACAATTCAA+TGG | - | chr5.2:9188450-9188469 | MS.gene041062:CDS | 35.0% | |
| GCCAGCATTGTAAAAAGATA+TGG | - | chr5.2:9192042-9192061 | MS.gene041062:intron | 35.0% | |
| GGGAAAGATCTTGAAATACA+TGG | - | chr5.2:9188427-9188446 | MS.gene041062:CDS | 35.0% | |
| GTTATATTGGTGCGAATACT+TGG | - | chr5.2:9188029-9188048 | MS.gene041062:CDS | 35.0% | |
| TAATCATCCCCTTTCTTTGA+AGG | + | chr5.2:9190554-9190573 | None:intergenic | 35.0% | |
| TCCAATTCCTATTGATGTAG+AGG | - | chr5.2:9188522-9188541 | MS.gene041062:intron | 35.0% | |
| TCCTCTACATCAATAGGAAT+TGG | + | chr5.2:9188526-9188545 | None:intergenic | 35.0% | |
| TCGAATTACTGCAAAATTGC+AGG | - | chr5.2:9189896-9189915 | MS.gene041062:CDS | 35.0% | |
| TCTGAAAAAGAAATCCGTTC+AGG | - | chr5.2:9188712-9188731 | MS.gene041062:CDS | 35.0% | |
| TCTTCAAAACATCTCTTTCG+TGG | + | chr5.2:9188097-9188116 | None:intergenic | 35.0% | |
| TGTCTATCTTGTCATCCAAT+GGG | - | chr5.2:9191013-9191032 | MS.gene041062:intron | 35.0% | |
| TGTTTGTCCTCTACATCAAT+AGG | + | chr5.2:9188532-9188551 | None:intergenic | 35.0% | |
| TTATACTAACTTCTCACTCC+AGG | - | chr5.2:9192066-9192085 | MS.gene041062:intron | 35.0% | |
| TTCAGGCCTAAAATACTTGA+CGG | + | chr5.2:9190308-9190327 | None:intergenic | 35.0% | |
| TTCCAAACAATCTACTCTCA+AGG | + | chr5.2:9191590-9191609 | None:intergenic | 35.0% | |
| TTTCCAAAACTTCAGCTCTA+CGG | + | chr5.2:9192348-9192367 | None:intergenic | 35.0% | |
| TTTCGTTTGCCATACTTTGA+AGG | - | chr5.2:9190833-9190852 | MS.gene041062:intron | 35.0% | |
| TTTGGTTATTTGATCATGGG+TGG | + | chr5.2:9188681-9188700 | None:intergenic | 35.0% | |
| ! | AGAAATTTCAGGAGTGTGAA+AGG | - | chr5.2:9191287-9191306 | MS.gene041062:intron | 35.0% |
| ! | CATTATGTTTAGTGTTGGAG+GGG | + | chr5.2:9191560-9191579 | None:intergenic | 35.0% |
| ! | CGAAAAGTCTTATCTCTAAG+TGG | + | chr5.2:9189632-9189651 | None:intergenic | 35.0% |
| ! | TCCTGGTAGGCAATATATTT+TGG | + | chr5.2:9191177-9191196 | None:intergenic | 35.0% |
| ! | TTCTTGATTTGAGAACAGTG+TGG | + | chr5.2:9191975-9191994 | None:intergenic | 35.0% |
| ! | TTTAGTTCAGAAGAAGCAAC+TGG | + | chr5.2:9190090-9190109 | None:intergenic | 35.0% |
| ! | TTTTAACAGAGTTCAACTGC+GGG | - | chr5.2:9188949-9188968 | MS.gene041062:CDS | 35.0% |
| ! | TTTTCCCCCTAACTTCTATT+AGG | - | chr5.2:9191147-9191166 | MS.gene041062:intron | 35.0% |
| !! | AGTATTTTAGGCCTGAAAGA+AGG | - | chr5.2:9190311-9190330 | MS.gene041062:intron | 35.0% |
| !! | CTTATTGACTTACACACAGA+TGG | - | chr5.2:9191875-9191894 | MS.gene041062:intron | 35.0% |
| !! | GTTTCTCAACTTGCTACATA+TGG | - | chr5.2:9190519-9190538 | MS.gene041062:intron | 35.0% |
| !! | TAATTTTAAGGGAACATGGC+AGG | + | chr5.2:9189815-9189834 | None:intergenic | 35.0% |
| !! | TCATTTTGAGTCATCGCATT+AGG | + | chr5.2:9191717-9191736 | None:intergenic | 35.0% |
| !!! | AGCTATGAGGAATTTTTTCC+TGG | + | chr5.2:9191194-9191213 | None:intergenic | 35.0% |
| !!! | ATGAGGAATTTTTTCCTGGT+AGG | + | chr5.2:9191190-9191209 | None:intergenic | 35.0% |
| !!! | TGCTTCTGTTGATTAGCTTT+TGG | + | chr5.2:9188608-9188627 | None:intergenic | 35.0% |
| AATGCATGTTCCCTTACCAA+AGG | - | chr5.2:9189560-9189579 | MS.gene041062:CDS | 40.0% | |
| ACACACTTCAAAGAATGGTG+AGG | - | chr5.2:9191418-9191437 | MS.gene041062:intron | 40.0% | |
| ACTTGTGCTCCTTCAAAGAA+AGG | - | chr5.2:9190542-9190561 | MS.gene041062:intron | 40.0% | |
| AGAAACAAAAGACAGACCAG+CGG | + | chr5.2:9190631-9190650 | None:intergenic | 40.0% | |
| AGGCAGAGTAGTATTTAGTC+AGG | - | chr5.2:9188372-9188391 | MS.gene041062:CDS | 40.0% | |
| AGGGAATGAGAATCTTGATG+AGG | - | chr5.2:9189690-9189709 | MS.gene041062:intron | 40.0% | |
| AGTGGGATGAATGCAATAGA+TGG | - | chr5.2:9189439-9189458 | MS.gene041062:CDS | 40.0% | |
| ATGCATGACTCCAAAACTGT+AGG | - | chr5.2:9189154-9189173 | MS.gene041062:CDS | 40.0% | |
| CAAACTGAAACTGAGACTTC+TGG | + | chr5.2:9191638-9191657 | None:intergenic | 40.0% | |
| CAGAGTAGTATTTAGTCAGG+AGG | - | chr5.2:9188375-9188394 | MS.gene041062:CDS | 40.0% | |
| CATCAATAGGAATTGGAAGC+TGG | + | chr5.2:9188519-9188538 | None:intergenic | 40.0% | |
| CCAACCTAATAGAAGTTAGG+GGG | + | chr5.2:9191154-9191173 | None:intergenic | 40.0% | |
| CGAGAAATTTGCACCTATTG+TGG | - | chr5.2:9188258-9188277 | MS.gene041062:intron | 40.0% | |
| CTCAAAAGATATCAGAGGAG+GGG | - | chr5.2:9188407-9188426 | MS.gene041062:CDS | 40.0% | |
| CTCATGCAAGAGAGAAAACT+GGG | - | chr5.2:9189657-9189676 | MS.gene041062:CDS | 40.0% | |
| CTTGTGCTCCTTCAAAGAAA+GGG | - | chr5.2:9190543-9190562 | MS.gene041062:intron | 40.0% | |
| GATGTAGAGGACAAACAAGA+CGG | - | chr5.2:9188535-9188554 | MS.gene041062:intron | 40.0% | |
| GATGTTGAACAGGACATACA+AGG | - | chr5.2:9188352-9188371 | MS.gene041062:CDS | 40.0% | |
| GCCAAAATATATTGCCTACC+AGG | - | chr5.2:9191173-9191192 | MS.gene041062:intron | 40.0% | |
| GCCAACCTAATAGAAGTTAG+GGG | + | chr5.2:9191155-9191174 | None:intergenic | 40.0% | |
| GCTCAAAAGATATCAGAGGA+GGG | - | chr5.2:9188406-9188425 | MS.gene041062:CDS | 40.0% | |
| GGCCAACCTAATAGAAGTTA+GGG | + | chr5.2:9191156-9191175 | None:intergenic | 40.0% | |
| GTCCTTGAGAGTAGATTGTT+TGG | - | chr5.2:9191585-9191604 | MS.gene041062:intron | 40.0% | |
| GTTATCTGTTGACAACCAAC+TGG | - | chr5.2:9189211-9189230 | MS.gene041062:CDS | 40.0% | |
| TACTGAAAAAGGGAACTCCA+AGG | - | chr5.2:9190802-9190821 | MS.gene041062:intron | 40.0% | |
| TCGCATTAGGATTGTGTAGA+TGG | + | chr5.2:9191704-9191723 | None:intergenic | 40.0% | |
| TCTCATGCAAGAGAGAAAAC+TGG | - | chr5.2:9189656-9189675 | MS.gene041062:CDS | 40.0% | |
| TGCATTCAGAGTCAAATTCC+TGG | + | chr5.2:9190242-9190261 | None:intergenic | 40.0% | |
| TGCTCAAAAGATATCAGAGG+AGG | - | chr5.2:9188405-9188424 | MS.gene041062:CDS | 40.0% | |
| TGGCCAACCTAATAGAAGTT+AGG | + | chr5.2:9191157-9191176 | None:intergenic | 40.0% | |
| TTGTGCTCCTTCAAAGAAAG+GGG | - | chr5.2:9190544-9190563 | MS.gene041062:intron | 40.0% | |
| ! | AATTGGAAGCTGGCTTATGA+GGG | + | chr5.2:9188509-9188528 | None:intergenic | 40.0% |
| ! | ACCTTCGAAAAAGAGAGTGT+AGG | - | chr5.2:9190893-9190912 | MS.gene041062:intron | 40.0% |
| ! | ATGGTAAACGAAGGTACGAA+GGG | + | chr5.2:9190353-9190372 | None:intergenic | 40.0% |
| ! | ATTTACCGATGCTGCTTCAA+AGG | - | chr5.2:9188291-9188310 | MS.gene041062:CDS | 40.0% |
| ! | GCAACTACAACCTACAGTTT+TGG | + | chr5.2:9189167-9189186 | None:intergenic | 40.0% |
| ! | GGAGCAGATGTATGCATTTT+TGG | - | chr5.2:9190207-9190226 | MS.gene041062:CDS | 40.0% |
| !! | ACAAACCTTTGAAGCAGCAT+CGG | + | chr5.2:9188299-9188318 | None:intergenic | 40.0% |
| !! | GCACTGATTTCTGTTCTACA+TGG | + | chr5.2:9192312-9192331 | None:intergenic | 40.0% |
| !!! | ACTCTCTTTTTCGAAGGTCT+TGG | + | chr5.2:9190891-9190910 | None:intergenic | 40.0% |
| !!! | CATTTTTGGAATGTACGTCC+AGG | - | chr5.2:9190221-9190240 | MS.gene041062:intron | 40.0% |
| !!! | TCCTACACTCTCTTTTTCGA+AGG | + | chr5.2:9190897-9190916 | None:intergenic | 40.0% |
| !!! | TTGGAGTTCCCTTTTTCAGT+AGG | + | chr5.2:9190803-9190822 | None:intergenic | 40.0% |
| AAGTAGGATTCTCCACAGAC+TGG | - | chr5.2:9188128-9188147 | MS.gene041062:intron | 45.0% | |
| AATGTAGAATACCACGCTGC+AGG | - | chr5.2:9192105-9192124 | MS.gene041062:intron | 45.0% | |
| AGAATTAGCCGCCTTTGGTA+AGG | + | chr5.2:9189574-9189593 | None:intergenic | 45.0% | |
| AGGTGGTGTACTAACCTGAA+CGG | + | chr5.2:9188729-9188748 | None:intergenic | 45.0% | |
| AGTTCAGAAGAAGCAACTGG+TGG | + | chr5.2:9190087-9190106 | None:intergenic | 45.0% | |
| ATCACCAGAGTCTCTTTGGA+AGG | + | chr5.2:9190983-9191002 | None:intergenic | 45.0% | |
| ATGGGTGGACAGATCAATCA+AGG | + | chr5.2:9188666-9188685 | None:intergenic | 45.0% | |
| CAAACGAAAAGCTGTCACCT+TGG | + | chr5.2:9190822-9190841 | None:intergenic | 45.0% | |
| CAGCAGTCTCCTTCAAAGTA+TGG | + | chr5.2:9190845-9190864 | None:intergenic | 45.0% | |
| CCACACTTTGTCCTTCTTTC+AGG | + | chr5.2:9190325-9190344 | None:intergenic | 45.0% | |
| CCCCCTAACTTCTATTAGGT+TGG | - | chr5.2:9191151-9191170 | MS.gene041062:intron | 45.0% | |
| CCTGAAAGAAGGACAAAGTG+TGG | - | chr5.2:9190322-9190341 | MS.gene041062:intron | 45.0% | |
| CGGCGTAGCTTATCATTCTT+CGG | + | chr5.2:9190611-9190630 | None:intergenic | 45.0% | |
| CTCCAGGAATTGCAAAGACT+CGG | - | chr5.2:9192082-9192101 | MS.gene041062:intron | 45.0% | |
| GAATTAGCCGCCTTTGGTAA+GGG | + | chr5.2:9189573-9189592 | None:intergenic | 45.0% | |
| GGAGGGGATATCATCAACAA+CGG | + | chr5.2:9191544-9191563 | None:intergenic | 45.0% | |
| TAGAGGAATACTTGGCACGA+CGG | + | chr5.2:9191668-9191687 | None:intergenic | 45.0% | |
| TCAGCAGGGTAATTCTCATC+TGG | + | chr5.2:9189266-9189285 | None:intergenic | 45.0% | |
| TCCCAGACACTATCACTTCA+CGG | + | chr5.2:9191243-9191262 | None:intergenic | 45.0% | |
| TGAGGTGCATACACTTTGTC+AGG | - | chr5.2:9191436-9191455 | MS.gene041062:intron | 45.0% | |
| TGGTCACTTAGCACTGTTCT+TGG | + | chr5.2:9189612-9189631 | None:intergenic | 45.0% | |
| TTACCAAAGGCGGCTAATTC+TGG | - | chr5.2:9189573-9189592 | MS.gene041062:CDS | 45.0% | |
| TTCCGAGTCTTTGCAATTCC+TGG | + | chr5.2:9192087-9192106 | None:intergenic | 45.0% | |
| TTGCATCACCAGAGTCTCTT+TGG | + | chr5.2:9190987-9191006 | None:intergenic | 45.0% | |
| ! | CATACTTTGAAGGAGACTGC+TGG | - | chr5.2:9190843-9190862 | MS.gene041062:intron | 45.0% |
| ! | CATGGTAAACGAAGGTACGA+AGG | + | chr5.2:9190354-9190373 | None:intergenic | 45.0% |
| ! | CTTCGGAGTCTTTTGCTCTT+CGG | + | chr5.2:9190594-9190613 | None:intergenic | 45.0% |
| ! | GAATTGGAAGCTGGCTTATG+AGG | + | chr5.2:9188510-9188529 | None:intergenic | 45.0% |
| ! | TTCGGAGTCTTTTGCTCTTC+GGG | + | chr5.2:9190593-9190612 | None:intergenic | 45.0% |
| ! | TTGCCGTAGAGCTGAAGTTT+TGG | - | chr5.2:9192342-9192361 | MS.gene041062:CDS | 45.0% |
| !! | ATGCATACACAAGCGCTGAT+TGG | + | chr5.2:9190271-9190290 | None:intergenic | 45.0% |
| !! | TGCATACACAAGCGCTGATT+GGG | + | chr5.2:9190270-9190289 | None:intergenic | 45.0% |
| !!! | GCTGAAGTTTTGGAAAGCGA+TGG | - | chr5.2:9192352-9192371 | MS.gene041062:CDS | 45.0% |
| ACTGCTTCTTCACTGCCAGT+TGG | + | chr5.2:9189229-9189248 | None:intergenic | 50.0% | |
| AGAATGATAAGCTACGCCGC+TGG | - | chr5.2:9190612-9190631 | MS.gene041062:intron | 50.0% | |
| AGAATGATACCGCCAGTCTG+TGG | + | chr5.2:9188143-9188162 | None:intergenic | 50.0% | |
| ATGGCTCAGCATTACTTGCC+CGG | + | chr5.2:9191944-9191963 | None:intergenic | 50.0% | |
| ATTGTAACACACCTGCAGCG+TGG | + | chr5.2:9192119-9192138 | None:intergenic | 50.0% | |
| CAAGCCTTCCAAAGAGACTC+TGG | - | chr5.2:9190976-9190995 | MS.gene041062:intron | 50.0% | |
| CAGCAGGGTAATTCTCCTCT+GGG | + | chr5.2:9190007-9190026 | None:intergenic | 50.0% | |
| CTTGAGAATCTGTCCCCTAC+TGG | + | chr5.2:9188573-9188592 | None:intergenic | 50.0% | |
| GAAAGCGATGGAGCAATCGT+TGG | - | chr5.2:9192364-9192383 | MS.gene041062:CDS | 50.0% | |
| GAACAGTGTGGATGAGAGCA+TGG | + | chr5.2:9191963-9191982 | None:intergenic | 50.0% | |
| GCATGTTCCCTTACCAAAGG+CGG | - | chr5.2:9189563-9189582 | MS.gene041062:CDS | 50.0% | |
| GGCAGTGAAGAAGCAGTTTC+TGG | - | chr5.2:9189232-9189251 | MS.gene041062:intron | 50.0% | |
| TAGGATTCTCCACAGACTGG+CGG | - | chr5.2:9188131-9188150 | MS.gene041062:intron | 50.0% | |
| TCAGCAGGGTAATTCTCCTC+TGG | + | chr5.2:9190008-9190027 | None:intergenic | 50.0% | |
| TTTGAAGGAGACTGCTGGTG+TGG | - | chr5.2:9190848-9190867 | MS.gene041062:intron | 50.0% | |
| ! | CAGAGTCTCTTTGGAAGGCT+TGG | + | chr5.2:9190978-9190997 | None:intergenic | 50.0% |
| ! | CTGCTGGTGTGGTAATGCTA+TGG | - | chr5.2:9190859-9190878 | MS.gene041062:intron | 50.0% |
| ! | GAGTCTTTTGCTCTTCGGGA+TGG | + | chr5.2:9190589-9190608 | None:intergenic | 50.0% |
| ! | GCCGTGAAGTGATAGTGTCT+GGG | - | chr5.2:9191239-9191258 | MS.gene041062:intron | 50.0% |
| ! | GTTTCTGGACATCATCCCAG+AGG | - | chr5.2:9189989-9190008 | MS.gene041062:intron | 50.0% |
| ! | TGATAGTGTCTGGGAAGCGA+TGG | - | chr5.2:9191248-9191267 | MS.gene041062:intron | 50.0% |
| ! | TGCCGTGAAGTGATAGTGTC+TGG | - | chr5.2:9191238-9191257 | MS.gene041062:intron | 50.0% |
| GCACCAGAATTAGCCGCCTT+TGG | + | chr5.2:9189579-9189598 | None:intergenic | 55.0% | |
| ! | GGCGGCTAATTCTGGTGCTA+AGG | - | chr5.2:9189581-9189600 | MS.gene041062:CDS | 55.0% |
| ATGCATCTCAATGCCGCCGC+CGG | - | chr5.2:9191922-9191941 | MS.gene041062:intron | 60.0% | |
| GCTCAGCATTACTTGCCCGG+CGG | + | chr5.2:9191941-9191960 | None:intergenic | 60.0% | |
| CAGCATTACTTGCCCGGCGG+CGG | + | chr5.2:9191938-9191957 | None:intergenic | 65.0% | |
| TGCATCTCAATGCCGCCGCC+GGG | - | chr5.2:9191923-9191942 | MS.gene041062:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 9188013 | 9192393 | 9188013 | ID=MS.gene041062 |
| chr5.2 | mRNA | 9188013 | 9192393 | 9188013 | ID=MS.gene041062.t1;Parent=MS.gene041062 |
| chr5.2 | exon | 9192206 | 9192393 | 9192206 | ID=MS.gene041062.t1.exon1;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9192206 | 9192393 | 9192206 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9190360 | 9190528 | 9190360 | ID=MS.gene041062.t1.exon2;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9190360 | 9190528 | 9190360 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9190174 | 9190226 | 9190174 | ID=MS.gene041062.t1.exon3;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9190174 | 9190226 | 9190174 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9190025 | 9190085 | 9190025 | ID=MS.gene041062.t1.exon4;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9190025 | 9190085 | 9190025 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9189773 | 9189918 | 9189773 | ID=MS.gene041062.t1.exon5;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9189773 | 9189918 | 9189773 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9189397 | 9189685 | 9189397 | ID=MS.gene041062.t1.exon6;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9189397 | 9189685 | 9189397 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9189098 | 9189237 | 9189098 | ID=MS.gene041062.t1.exon7;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9189098 | 9189237 | 9189098 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9188949 | 9189006 | 9188949 | ID=MS.gene041062.t1.exon8;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9188949 | 9189006 | 9188949 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9188639 | 9188866 | 9188639 | ID=MS.gene041062.t1.exon9;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9188639 | 9188866 | 9188639 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9188280 | 9188512 | 9188280 | ID=MS.gene041062.t1.exon10;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9188280 | 9188512 | 9188280 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| chr5.2 | exon | 9188013 | 9188109 | 9188013 | ID=MS.gene041062.t1.exon11;Parent=MS.gene041062.t1 |
| chr5.2 | CDS | 9188013 | 9188109 | 9188013 | ID=cds.MS.gene041062.t1;Parent=MS.gene041062.t1 |
| Gene Sequence |
| Protein sequence |
