Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041096.t1 | XP_003611755.1 | 81.3 | 251 | 25 | 3 | 1 | 251 | 1 | 229 | 2.00E-102 | 382.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041096.t1 | G7K6Q6 | 81.3 | 251 | 25 | 3 | 1 | 251 | 1 | 229 | 1.4e-102 | 382.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene041096.t1 | TF | Trihelix |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041096.t1 | MTR_5g017500 | 84.861 | 251 | 16 | 4 | 1 | 251 | 1 | 229 | 1.02e-144 | 404 |
MS.gene041096.t1 | MTR_4g117990 | 45.872 | 109 | 57 | 1 | 15 | 123 | 36 | 142 | 4.06e-27 | 107 |
MS.gene041096.t1 | MTR_7g081190 | 49.020 | 102 | 49 | 2 | 20 | 119 | 43 | 143 | 9.74e-22 | 93.2 |
MS.gene041096.t1 | MTR_1g061600 | 31.111 | 135 | 74 | 4 | 23 | 144 | 133 | 261 | 6.89e-16 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041096.t1 | AT3G24860 | 33.829 | 269 | 135 | 6 | 12 | 250 | 54 | 309 | 2.36e-43 | 149 |
MS.gene041096.t1 | AT2G44730 | 44.348 | 115 | 54 | 2 | 10 | 120 | 51 | 159 | 1.22e-22 | 95.5 |
MS.gene041096.t1 | AT3G10030 | 36.634 | 101 | 58 | 2 | 23 | 123 | 161 | 255 | 2.91e-15 | 75.1 |
MS.gene041096.t1 | AT3G54390 | 28.692 | 237 | 130 | 8 | 23 | 235 | 54 | 275 | 3.24e-15 | 74.3 |
MS.gene041096.t1 | AT3G54390 | 28.814 | 236 | 129 | 8 | 23 | 234 | 38 | 258 | 3.25e-15 | 73.9 |
MS.gene041096.t1 | AT3G10030 | 36.634 | 101 | 58 | 2 | 23 | 123 | 161 | 255 | 3.29e-15 | 75.1 |
MS.gene041096.t1 | AT3G58630 | 31.624 | 117 | 67 | 2 | 23 | 129 | 26 | 139 | 3.87e-14 | 71.2 |
MS.gene041096.t1 | AT3G58630 | 31.624 | 117 | 67 | 2 | 23 | 129 | 26 | 139 | 4.09e-14 | 71.2 |
Find 80 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTGTTACTGTTGGTTTC+TGG | 0.153076 | 5.2:-9600912 | None:intergenic |
TGATGAGGTTAATGGTTTCT+TGG | 0.248878 | 5.2:-9600501 | None:intergenic |
GTAGGCTCTGATGAGGTTAA+TGG | 0.265129 | 5.2:-9600509 | None:intergenic |
GATTCTATTGGAAAGGCATT+TGG | 0.282980 | 5.2:+9601150 | MS.gene041096:CDS |
TGGAGGATTGTTGATTCTAT+TGG | 0.285128 | 5.2:+9601138 | MS.gene041096:CDS |
ACGACATTGAAGAGCGGTTT+TGG | 0.311108 | 5.2:-9600638 | None:intergenic |
TCTTGGTGGGTCCATGGAAT+GGG | 0.347722 | 5.2:-9600484 | None:intergenic |
TTCTTGGTGGGTCCATGGAA+TGG | 0.347924 | 5.2:-9600485 | None:intergenic |
CCGTCGCTATCGTCGGAGAT+AGG | 0.363885 | 5.2:-9600823 | None:intergenic |
GATTAGAGATGGAGAATAAG+AGG | 0.371813 | 5.2:+9601091 | MS.gene041096:CDS |
ATTCTATTGGAAAGGCATTT+GGG | 0.373738 | 5.2:+9601151 | MS.gene041096:CDS |
TTTCAGATCGGTGGCGTTGA+CGG | 0.386482 | 5.2:-9600678 | None:intergenic |
ATGGGTTGAGGTTTCTTTGT+GGG | 0.390802 | 5.2:-9600466 | None:intergenic |
GAAATGGTATTCACTCAAAC+GGG | 0.393548 | 5.2:+9600537 | MS.gene041096:CDS |
GCCCACTCCGCGGCAGTCAA+TGG | 0.394607 | 5.2:+9600560 | MS.gene041096:CDS |
GAAAGAGGTCGGACGGAGAT+AGG | 0.403361 | 5.2:-9600790 | None:intergenic |
CCGCCGCTTCTTCTCGATCC+TGG | 0.407620 | 5.2:+9600725 | MS.gene041096:CDS |
CCCATTGACTGCCGCGGAGT+GGG | 0.424106 | 5.2:-9600561 | None:intergenic |
TGCAGAGAGGATTGTAGGGT+TGG | 0.427539 | 5.2:+9601026 | MS.gene041096:CDS |
ATGGTTTCTTGGTGGGTCCA+TGG | 0.435098 | 5.2:-9600490 | None:intergenic |
ATAGTGCTGCTAGGTCTGTT+AGG | 0.441997 | 5.2:+9600863 | MS.gene041096:CDS |
GGAGGAGGAAGACGAAGAGG+AGG | 0.442580 | 5.2:+9600963 | MS.gene041096:CDS |
TGGGTCCATGGAATGGGTTG+AGG | 0.452120 | 5.2:-9600478 | None:intergenic |
CCCACTCCGCGGCAGTCAAT+GGG | 0.457508 | 5.2:+9600561 | MS.gene041096:CDS |
AACTGATGATGAAGAGGAGG+AGG | 0.459365 | 5.2:+9600948 | MS.gene041096:CDS |
CGTTGTTGTCTTGTTACTGT+TGG | 0.464913 | 5.2:-9600919 | None:intergenic |
GGATCGAGAAGAAGCGGCGG+AGG | 0.465439 | 5.2:-9600722 | None:intergenic |
AGAGAGGTTTAGATTAGAGA+TGG | 0.466781 | 5.2:+9601080 | MS.gene041096:CDS |
TTGAGGTTTCTTTGTGGGAA+GGG | 0.468718 | 5.2:-9600461 | None:intergenic |
TCAGAGCCTACCAAGAGAAA+TGG | 0.468909 | 5.2:+9600521 | MS.gene041096:CDS |
TCCCATTGACTGCCGCGGAG+TGG | 0.479922 | 5.2:-9600562 | None:intergenic |
AGAAATGGTATTCACTCAAA+CGG | 0.486979 | 5.2:+9600536 | MS.gene041096:CDS |
GTATGATACTTGAATCTCAA+TGG | 0.493726 | 5.2:+9601118 | MS.gene041096:CDS |
GAGGAGGAAGACGAAGAGGA+GGG | 0.496326 | 5.2:+9600964 | MS.gene041096:CDS |
GAGGTTAATGGTTTCTTGGT+GGG | 0.497980 | 5.2:-9600497 | None:intergenic |
AGGGAAAGAGTGAGTTCTGC+TGG | 0.504699 | 5.2:-9600442 | None:intergenic |
CGTCGCTATCGTCGGAGATA+GGG | 0.505081 | 5.2:-9600822 | None:intergenic |
TGAATACCATTTCTCTTGGT+AGG | 0.515604 | 5.2:-9600527 | None:intergenic |
TGAGTGAATACCATTTCTCT+TGG | 0.519977 | 5.2:-9600531 | None:intergenic |
GATTGTTGATTCTATTGGAA+AGG | 0.528242 | 5.2:+9601143 | MS.gene041096:CDS |
AGACGAAGAGGAGGGAGTGA+TGG | 0.530323 | 5.2:+9600972 | MS.gene041096:CDS |
TGAGGTTAATGGTTTCTTGG+TGG | 0.535347 | 5.2:-9600498 | None:intergenic |
TCTTCAATGTCGTCATAAGA+TGG | 0.539576 | 5.2:+9600648 | MS.gene041096:CDS |
AATGGGTTGAGGTTTCTTTG+TGG | 0.544865 | 5.2:-9600467 | None:intergenic |
AGAAACCTCAACCCATTCCA+TGG | 0.546082 | 5.2:+9600473 | MS.gene041096:CDS |
TCTCTTGGTAGGCTCTGATG+AGG | 0.553443 | 5.2:-9600516 | None:intergenic |
TAAGAAGATGGAGATGATGA+AGG | 0.556347 | 5.2:+9601053 | MS.gene041096:CDS |
AGAGGAGGAGGAAGACGAAG+AGG | 0.557060 | 5.2:+9600960 | MS.gene041096:CDS |
CGGCAGTCAATGGGAAGAAG+TGG | 0.558439 | 5.2:+9600570 | MS.gene041096:CDS |
ATAGGGTGCTTCTGAGAAAG+AGG | 0.564002 | 5.2:-9600805 | None:intergenic |
GTTGAGGTTTCTTTGTGGGA+AGG | 0.565690 | 5.2:-9600462 | None:intergenic |
GGTCGGACGGAGATAGGTAA+AGG | 0.569635 | 5.2:-9600784 | None:intergenic |
AGGGTTGGAAAATAAGAAGA+TGG | 0.571203 | 5.2:+9601041 | MS.gene041096:CDS |
CTTCTTCCCATTGACTGCCG+CGG | 0.577676 | 5.2:-9600567 | None:intergenic |
AGAAGCGGCGGAGGAAGTAG+CGG | 0.578291 | 5.2:-9600713 | None:intergenic |
CTGCTAGGTCTGTTAGGTCA+AGG | 0.578720 | 5.2:+9600869 | MS.gene041096:CDS |
CCGACGATAGCGACGGTGAG+AGG | 0.582725 | 5.2:+9600830 | MS.gene041096:CDS |
CCTCTCACCGTCGCTATCGT+CGG | 0.588877 | 5.2:-9600830 | None:intergenic |
CGGAGGAAGTAGCGGTGAGG+CGG | 0.592434 | 5.2:-9600705 | None:intergenic |
CGACGATAGCGACGGTGAGA+GGG | 0.604292 | 5.2:+9600831 | MS.gene041096:CDS |
GAGTTCTGCTGGTGAAGCGG+TGG | 0.606218 | 5.2:-9600431 | None:intergenic |
CATGAGACGAAAATACTGCC+AGG | 0.607104 | 5.2:-9600743 | None:intergenic |
CTTCTGAGAAAGAGGTCGGA+CGG | 0.613702 | 5.2:-9600797 | None:intergenic |
CTGCCAGGATCGAGAAGAAG+CGG | 0.618066 | 5.2:-9600728 | None:intergenic |
GGTGCTTCTGAGAAAGAGGT+CGG | 0.636676 | 5.2:-9600801 | None:intergenic |
AGATGATGAAGGAAACAGAG+AGG | 0.638850 | 5.2:+9601064 | MS.gene041096:CDS |
CTCAAACGGGGCCCACTCCG+CGG | 0.643190 | 5.2:+9600550 | MS.gene041096:CDS |
TGATGAAACTGATGATGAAG+AGG | 0.652723 | 5.2:+9600942 | MS.gene041096:CDS |
TGATACTTGAATCTCAATGG+AGG | 0.662965 | 5.2:+9601121 | MS.gene041096:CDS |
CTCATGGATGATCTTGAACG+CGG | 0.669974 | 5.2:+9600760 | MS.gene041096:CDS |
CCAGGATCGAGAAGAAGCGG+CGG | 0.670197 | 5.2:-9600725 | None:intergenic |
AGTGAGTTCTGCTGGTGAAG+CGG | 0.672238 | 5.2:-9600434 | None:intergenic |
TGAAACTGATGATGAAGAGG+AGG | 0.676552 | 5.2:+9600945 | MS.gene041096:CDS |
CTTATGACGACATTGAAGAG+CGG | 0.678566 | 5.2:-9600644 | None:intergenic |
CCTATCTCCGACGATAGCGA+CGG | 0.701116 | 5.2:+9600823 | MS.gene041096:CDS |
GTAATCGTAGCCGCAACGAG+CGG | 0.705311 | 5.2:-9600605 | None:intergenic |
CGGCGGAGGAAGTAGCGGTG+AGG | 0.707049 | 5.2:-9600708 | None:intergenic |
GATGGCGAAGAGTTTGACAG+CGG | 0.738106 | 5.2:+9600990 | MS.gene041096:CDS |
AAATGGTATTCACTCAAACG+GGG | 0.751020 | 5.2:+9600538 | MS.gene041096:CDS |
GTAGTCGTAGCCGCTCGTTG+CGG | 0.770618 | 5.2:+9600595 | MS.gene041096:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AGAAATGGTATTCACTCAAA+CGG | + | chr5.2:9600536-9600555 | MS.gene041096:CDS | 30.0% | |
GTATGATACTTGAATCTCAA+TGG | + | chr5.2:9601118-9601137 | MS.gene041096:CDS | 30.0% | |
!! | ATTCTATTGGAAAGGCATTT+GGG | + | chr5.2:9601151-9601170 | MS.gene041096:CDS | 30.0% |
!! | GATTGTTGATTCTATTGGAA+AGG | + | chr5.2:9601143-9601162 | MS.gene041096:CDS | 30.0% |
AAATGGTATTCACTCAAACG+GGG | + | chr5.2:9600538-9600557 | MS.gene041096:CDS | 35.0% | |
AGAGAGGTTTAGATTAGAGA+TGG | + | chr5.2:9601080-9601099 | MS.gene041096:CDS | 35.0% | |
AGGGTTGGAAAATAAGAAGA+TGG | + | chr5.2:9601041-9601060 | MS.gene041096:CDS | 35.0% | |
GAAATGGTATTCACTCAAAC+GGG | + | chr5.2:9600537-9600556 | MS.gene041096:CDS | 35.0% | |
GATTAGAGATGGAGAATAAG+AGG | + | chr5.2:9601091-9601110 | MS.gene041096:CDS | 35.0% | |
TAAGAAGATGGAGATGATGA+AGG | + | chr5.2:9601053-9601072 | MS.gene041096:CDS | 35.0% | |
TCTTCAATGTCGTCATAAGA+TGG | + | chr5.2:9600648-9600667 | MS.gene041096:CDS | 35.0% | |
TGAATACCATTTCTCTTGGT+AGG | - | chr5.2:9600530-9600549 | None:intergenic | 35.0% | |
TGAGTGAATACCATTTCTCT+TGG | - | chr5.2:9600534-9600553 | None:intergenic | 35.0% | |
TGATACTTGAATCTCAATGG+AGG | + | chr5.2:9601121-9601140 | MS.gene041096:CDS | 35.0% | |
TGATGAGGTTAATGGTTTCT+TGG | - | chr5.2:9600504-9600523 | None:intergenic | 35.0% | |
! | TGATGAAACTGATGATGAAG+AGG | + | chr5.2:9600942-9600961 | MS.gene041096:CDS | 35.0% |
!! | GATTCTATTGGAAAGGCATT+TGG | + | chr5.2:9601150-9601169 | MS.gene041096:CDS | 35.0% |
!! | TGGAGGATTGTTGATTCTAT+TGG | + | chr5.2:9601138-9601157 | MS.gene041096:CDS | 35.0% |
AGATGATGAAGGAAACAGAG+AGG | + | chr5.2:9601064-9601083 | MS.gene041096:CDS | 40.0% | |
CTTATGACGACATTGAAGAG+CGG | - | chr5.2:9600647-9600666 | None:intergenic | 40.0% | |
GAGGTTAATGGTTTCTTGGT+GGG | - | chr5.2:9600500-9600519 | None:intergenic | 40.0% | |
TGAGGTTAATGGTTTCTTGG+TGG | - | chr5.2:9600501-9600520 | None:intergenic | 40.0% | |
TTGAGGTTTCTTTGTGGGAA+GGG | - | chr5.2:9600464-9600483 | None:intergenic | 40.0% | |
! | AGTTGAGAAGTTTTGCAGAG+AGG | + | chr5.2:9601013-9601032 | MS.gene041096:CDS | 40.0% |
! | AGTTTTGCAGAGAGGATTGT+AGG | + | chr5.2:9601021-9601040 | MS.gene041096:CDS | 40.0% |
! | ATGGGTTGAGGTTTCTTTGT+GGG | - | chr5.2:9600469-9600488 | None:intergenic | 40.0% |
! | CGTTGTTGTCTTGTTACTGT+TGG | - | chr5.2:9600922-9600941 | None:intergenic | 40.0% |
! | GTTTTGCAGAGAGGATTGTA+GGG | + | chr5.2:9601022-9601041 | MS.gene041096:CDS | 40.0% |
! | TGAAAAAGCATAGTGCTGCT+AGG | + | chr5.2:9600854-9600873 | MS.gene041096:CDS | 40.0% |
! | TGAAACTGATGATGAAGAGG+AGG | + | chr5.2:9600945-9600964 | MS.gene041096:CDS | 40.0% |
!! | AATGGGTTGAGGTTTCTTTG+TGG | - | chr5.2:9600470-9600489 | None:intergenic | 40.0% |
!! | GTCTTGTTACTGTTGGTTTC+TGG | - | chr5.2:9600915-9600934 | None:intergenic | 40.0% |
!!! | ATTGAAGAGCGGTTTTGGAA+GGG | - | chr5.2:9600636-9600655 | None:intergenic | 40.0% |
AGAAACCTCAACCCATTCCA+TGG | + | chr5.2:9600473-9600492 | MS.gene041096:CDS | 45.0% | |
CATGAGACGAAAATACTGCC+AGG | - | chr5.2:9600746-9600765 | None:intergenic | 45.0% | |
CTCATGGATGATCTTGAACG+CGG | + | chr5.2:9600760-9600779 | MS.gene041096:CDS | 45.0% | |
GTTGAGGTTTCTTTGTGGGA+AGG | - | chr5.2:9600465-9600484 | None:intergenic | 45.0% | |
TCAGAGCCTACCAAGAGAAA+TGG | + | chr5.2:9600521-9600540 | MS.gene041096:CDS | 45.0% | |
! | AACTGATGATGAAGAGGAGG+AGG | + | chr5.2:9600948-9600967 | MS.gene041096:CDS | 45.0% |
! | ACGACATTGAAGAGCGGTTT+TGG | - | chr5.2:9600641-9600660 | None:intergenic | 45.0% |
! | ATAGGGTGCTTCTGAGAAAG+AGG | - | chr5.2:9600808-9600827 | None:intergenic | 45.0% |
! | ATAGTGCTGCTAGGTCTGTT+AGG | + | chr5.2:9600863-9600882 | MS.gene041096:CDS | 45.0% |
! | CTGGCAGTATTTTCGTCTCA+TGG | + | chr5.2:9600744-9600763 | MS.gene041096:CDS | 45.0% |
! | GTAGGCTCTGATGAGGTTAA+TGG | - | chr5.2:9600512-9600531 | None:intergenic | 45.0% |
!! | TGAGGCGGTGTTTTTCAGAT+CGG | - | chr5.2:9600693-9600712 | None:intergenic | 45.0% |
!!! | CATTGAAGAGCGGTTTTGGA+AGG | - | chr5.2:9600637-9600656 | None:intergenic | 45.0% |
AGGGAAAGAGTGAGTTCTGC+TGG | - | chr5.2:9600445-9600464 | None:intergenic | 50.0% | |
AGTGAGTTCTGCTGGTGAAG+CGG | - | chr5.2:9600437-9600456 | None:intergenic | 50.0% | |
CTGCTAGGTCTGTTAGGTCA+AGG | + | chr5.2:9600869-9600888 | MS.gene041096:CDS | 50.0% | |
GATGGCGAAGAGTTTGACAG+CGG | + | chr5.2:9600990-9601009 | MS.gene041096:CDS | 50.0% | |
TGCAGAGAGGATTGTAGGGT+TGG | + | chr5.2:9601026-9601045 | MS.gene041096:CDS | 50.0% | |
! | ATGGTTTCTTGGTGGGTCCA+TGG | - | chr5.2:9600493-9600512 | None:intergenic | 50.0% |
! | CTTCTGAGAAAGAGGTCGGA+CGG | - | chr5.2:9600800-9600819 | None:intergenic | 50.0% |
! | GGTGCTTCTGAGAAAGAGGT+CGG | - | chr5.2:9600804-9600823 | None:intergenic | 50.0% |
! | TCTCTTGGTAGGCTCTGATG+AGG | - | chr5.2:9600519-9600538 | None:intergenic | 50.0% |
! | TCTTGGTGGGTCCATGGAAT+GGG | - | chr5.2:9600487-9600506 | None:intergenic | 50.0% |
! | TTCTTGGTGGGTCCATGGAA+TGG | - | chr5.2:9600488-9600507 | None:intergenic | 50.0% |
! | TTTCAGATCGGTGGCGTTGA+CGG | - | chr5.2:9600681-9600700 | None:intergenic | 50.0% |
AGACGAAGAGGAGGGAGTGA+TGG | + | chr5.2:9600972-9600991 | MS.gene041096:CDS | 55.0% | |
AGAGGAGGAGGAAGACGAAG+AGG | + | chr5.2:9600960-9600979 | MS.gene041096:CDS | 55.0% | |
CCTATCTCCGACGATAGCGA+CGG | + | chr5.2:9600823-9600842 | MS.gene041096:CDS | 55.0% | |
CGGCAGTCAATGGGAAGAAG+TGG | + | chr5.2:9600570-9600589 | MS.gene041096:CDS | 55.0% | |
CGTCGCTATCGTCGGAGATA+GGG | - | chr5.2:9600825-9600844 | None:intergenic | 55.0% | |
CTGCCAGGATCGAGAAGAAG+CGG | - | chr5.2:9600731-9600750 | None:intergenic | 55.0% | |
GAAAGAGGTCGGACGGAGAT+AGG | - | chr5.2:9600793-9600812 | None:intergenic | 55.0% | |
GAGGAGGAAGACGAAGAGGA+GGG | + | chr5.2:9600964-9600983 | MS.gene041096:CDS | 55.0% | |
GGTCGGACGGAGATAGGTAA+AGG | - | chr5.2:9600787-9600806 | None:intergenic | 55.0% | |
GTAATCGTAGCCGCAACGAG+CGG | - | chr5.2:9600608-9600627 | None:intergenic | 55.0% | |
! | CTTCTTCCCATTGACTGCCG+CGG | - | chr5.2:9600570-9600589 | None:intergenic | 55.0% |
!! | GGCGGTGTTTTTCAGATCGG+TGG | - | chr5.2:9600690-9600709 | None:intergenic | 55.0% |
!! | TGGGTCCATGGAATGGGTTG+AGG | - | chr5.2:9600481-9600500 | None:intergenic | 55.0% |
!!! | GAAGAGCGGTTTTGGAAGGG+TGG | - | chr5.2:9600633-9600652 | None:intergenic | 55.0% |
AGAAGCGGCGGAGGAAGTAG+CGG | - | chr5.2:9600716-9600735 | None:intergenic | 60.0% | |
CCAGGATCGAGAAGAAGCGG+CGG | - | chr5.2:9600728-9600747 | None:intergenic | 60.0% | |
CCGTCGCTATCGTCGGAGAT+AGG | - | chr5.2:9600826-9600845 | None:intergenic | 60.0% | |
CCTCTCACCGTCGCTATCGT+CGG | - | chr5.2:9600833-9600852 | None:intergenic | 60.0% | |
CGACGATAGCGACGGTGAGA+GGG | + | chr5.2:9600831-9600850 | MS.gene041096:CDS | 60.0% | |
GAGTTCTGCTGGTGAAGCGG+TGG | - | chr5.2:9600434-9600453 | None:intergenic | 60.0% | |
GGAGGAGGAAGACGAAGAGG+AGG | + | chr5.2:9600963-9600982 | MS.gene041096:CDS | 60.0% | |
GTAGTCGTAGCCGCTCGTTG+CGG | + | chr5.2:9600595-9600614 | MS.gene041096:CDS | 60.0% | |
CCCACTCCGCGGCAGTCAAT+GGG | + | chr5.2:9600561-9600580 | MS.gene041096:CDS | 65.0% | |
CCGACGATAGCGACGGTGAG+AGG | + | chr5.2:9600830-9600849 | MS.gene041096:CDS | 65.0% | |
CCGCCGCTTCTTCTCGATCC+TGG | + | chr5.2:9600725-9600744 | MS.gene041096:CDS | 65.0% | |
CGGAGGAAGTAGCGGTGAGG+CGG | - | chr5.2:9600708-9600727 | None:intergenic | 65.0% | |
GGATCGAGAAGAAGCGGCGG+AGG | - | chr5.2:9600725-9600744 | None:intergenic | 65.0% | |
! | CCCATTGACTGCCGCGGAGT+GGG | - | chr5.2:9600564-9600583 | None:intergenic | 65.0% |
! | TCCCATTGACTGCCGCGGAG+TGG | - | chr5.2:9600565-9600584 | None:intergenic | 65.0% |
CGGCGGAGGAAGTAGCGGTG+AGG | - | chr5.2:9600711-9600730 | None:intergenic | 70.0% | |
CTCAAACGGGGCCCACTCCG+CGG | + | chr5.2:9600550-9600569 | MS.gene041096:CDS | 70.0% | |
GCCCACTCCGCGGCAGTCAA+TGG | + | chr5.2:9600560-9600579 | MS.gene041096:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 9600427 | 9601182 | 9600427 | ID=MS.gene041096 |
chr5.2 | mRNA | 9600427 | 9601182 | 9600427 | ID=MS.gene041096.t1;Parent=MS.gene041096 |
chr5.2 | exon | 9600427 | 9601182 | 9600427 | ID=MS.gene041096.t1.exon1;Parent=MS.gene041096.t1 |
chr5.2 | CDS | 9600427 | 9601182 | 9600427 | ID=cds.MS.gene041096.t1;Parent=MS.gene041096.t1 |
Gene Sequence |
Protein sequence |