Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041179.t1 | XP_003611877.2 | 95.6 | 527 | 21 | 1 | 1 | 527 | 1 | 525 | 5.40E-267 | 929.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041179.t1 | Q8W4F0 | 67.1 | 559 | 145 | 4 | 1 | 526 | 1 | 553 | 7.7e-190 | 664.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041179.t1 | G7KAS2 | 95.6 | 527 | 21 | 1 | 1 | 527 | 1 | 525 | 3.9e-267 | 929.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene041179.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041179.t1 | MTR_5g018900 | 97.343 | 527 | 12 | 1 | 1 | 527 | 1 | 525 | 0.0 | 1065 |
| MS.gene041179.t1 | MTR_8g078410 | 75.376 | 532 | 124 | 5 | 1 | 526 | 1 | 531 | 0.0 | 773 |
| MS.gene041179.t1 | MTR_1g021835 | 58.935 | 526 | 158 | 6 | 1 | 526 | 1 | 468 | 0.0 | 607 |
| MS.gene041179.t1 | MTR_5g081160 | 50.947 | 528 | 201 | 6 | 1 | 526 | 32 | 503 | 1.55e-178 | 512 |
| MS.gene041179.t1 | MTR_1g021835 | 57.692 | 416 | 125 | 5 | 1 | 416 | 1 | 365 | 1.50e-169 | 486 |
| MS.gene041179.t1 | MTR_3g069410 | 56.954 | 453 | 164 | 6 | 101 | 526 | 64 | 512 | 4.03e-169 | 488 |
| MS.gene041179.t1 | MTR_1g021835 | 55.775 | 355 | 110 | 3 | 1 | 355 | 1 | 308 | 2.46e-138 | 402 |
| MS.gene041179.t1 | MTR_5g018910 | 76.404 | 89 | 20 | 1 | 156 | 244 | 496 | 583 | 1.33e-41 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041179.t1 | AT4G36860 | 66.905 | 559 | 146 | 6 | 1 | 526 | 1 | 553 | 0.0 | 715 |
| MS.gene041179.t1 | AT4G36860 | 64.605 | 582 | 145 | 7 | 1 | 526 | 1 | 577 | 0.0 | 709 |
| MS.gene041179.t1 | AT1G19270 | 52.055 | 584 | 169 | 8 | 1 | 526 | 1 | 531 | 0.0 | 583 |
| MS.gene041179.t1 | AT1G19270 | 52.055 | 584 | 169 | 8 | 1 | 526 | 1 | 531 | 0.0 | 583 |
| MS.gene041179.t1 | AT4G36860 | 64.811 | 449 | 124 | 5 | 1 | 416 | 1 | 448 | 0.0 | 570 |
| MS.gene041179.t1 | AT2G39830 | 57.718 | 447 | 164 | 5 | 102 | 526 | 75 | 518 | 0.0 | 518 |
| MS.gene041179.t1 | AT2G39830 | 56.484 | 455 | 172 | 6 | 94 | 526 | 77 | 527 | 3.12e-180 | 517 |
| MS.gene041179.t1 | AT2G39830 | 56.114 | 458 | 172 | 7 | 94 | 526 | 77 | 530 | 7.74e-178 | 511 |
| MS.gene041179.t1 | AT2G39830 | 53.591 | 362 | 143 | 6 | 94 | 432 | 77 | 436 | 2.05e-135 | 400 |
| MS.gene041179.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 181 | 640 | 9.98e-135 | 405 |
| MS.gene041179.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 172 | 631 | 1.13e-134 | 404 |
| MS.gene041179.t1 | AT5G66620 | 46.667 | 480 | 229 | 9 | 47 | 519 | 172 | 631 | 1.13e-134 | 404 |
| MS.gene041179.t1 | AT5G66610 | 45.759 | 507 | 221 | 10 | 45 | 520 | 68 | 551 | 5.54e-129 | 387 |
| MS.gene041179.t1 | AT5G66610 | 46.171 | 457 | 204 | 8 | 66 | 520 | 8 | 424 | 3.78e-126 | 376 |
| MS.gene041179.t1 | AT5G66610 | 42.884 | 534 | 224 | 11 | 45 | 520 | 68 | 578 | 3.80e-123 | 373 |
| MS.gene041179.t1 | AT5G66630 | 48.533 | 375 | 176 | 7 | 148 | 519 | 338 | 698 | 1.82e-111 | 347 |
| MS.gene041179.t1 | AT5G66640 | 43.656 | 465 | 228 | 14 | 71 | 519 | 24 | 470 | 2.53e-107 | 329 |
| MS.gene041179.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 8.69e-107 | 327 |
| MS.gene041179.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 8.69e-107 | 327 |
| MS.gene041179.t1 | AT5G66640 | 43.441 | 465 | 228 | 14 | 71 | 519 | 24 | 469 | 1.33e-106 | 327 |
| MS.gene041179.t1 | AT5G17890 | 50.806 | 372 | 173 | 5 | 153 | 519 | 1235 | 1601 | 2.50e-104 | 343 |
| MS.gene041179.t1 | AT5G66640 | 50.155 | 323 | 152 | 6 | 205 | 519 | 10 | 331 | 2.09e-100 | 306 |
| MS.gene041179.t1 | AT5G66640 | 40.215 | 465 | 240 | 15 | 71 | 519 | 24 | 466 | 5.44e-91 | 287 |
| MS.gene041179.t1 | AT5G66640 | 40.000 | 465 | 240 | 15 | 71 | 519 | 24 | 465 | 2.96e-90 | 285 |
| MS.gene041179.t1 | AT5G66620 | 41.399 | 343 | 174 | 9 | 47 | 382 | 172 | 494 | 2.14e-77 | 252 |
Find 129 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCCTTCTTCAATTTC+TGG | 0.060868 | 5.1:-10876411 | None:intergenic |
| AGTATAGAGCTCATCCTTTC+TGG | 0.166643 | 5.1:+10875345 | MS.gene041179:CDS |
| AACATGGTGATGATAGAATT+TGG | 0.189733 | 5.1:+10872540 | MS.gene041179:CDS |
| GGCTCTAATCATAGAATTTC+AGG | 0.190682 | 5.1:+10872500 | MS.gene041179:CDS |
| TCTCCCTGTAGCAGGATTTA+TGG | 0.233835 | 5.1:-10874344 | None:intergenic |
| CATGCATGGCTCAGGCTTAA+AGG | 0.237169 | 5.1:+10876278 | MS.gene041179:CDS |
| GTCTTCCTCAAGTTGATCTT+TGG | 0.266836 | 5.1:-10873230 | None:intergenic |
| GCAGCAAGTTCCTATGCTTT+TGG | 0.277916 | 5.1:+10875694 | MS.gene041179:CDS |
| CATCGACGGGTCAGTCTATA+AGG | 0.282747 | 5.1:-10876096 | None:intergenic |
| GTGTCTAGACTCAGCAATTA+TGG | 0.285275 | 5.1:+10875601 | MS.gene041179:CDS |
| CATAAAATTCTAGTATTTCA+TGG | 0.285949 | 5.1:-10875649 | None:intergenic |
| GTCCTCTAGTTTCAGGTAAA+TGG | 0.286014 | 5.1:-10875880 | None:intergenic |
| CGGTGTCCTGCCCCTATACT+TGG | 0.286586 | 5.1:-10876051 | None:intergenic |
| TACCAGGCGGTACTTAAGTA+TGG | 0.294982 | 5.1:+10876657 | MS.gene041179:CDS |
| ACCTCTTTCCACCAGGATTC+AGG | 0.345128 | 5.1:+10873341 | MS.gene041179:CDS |
| TTAGAATCAGAGCTCTATTC+TGG | 0.345608 | 5.1:+10876456 | MS.gene041179:CDS |
| TGCTGTCGAGCTCATGCGTT+GGG | 0.363900 | 5.1:-10875382 | None:intergenic |
| TCAGAGCTCTATTCTGGATC+TGG | 0.372505 | 5.1:+10876462 | MS.gene041179:CDS |
| AAGCAGAGTCCTCTAGTTTC+AGG | 0.382892 | 5.1:-10875887 | None:intergenic |
| TAAGTTGCATGGGAGGGGTC+TGG | 0.385209 | 5.1:+10874070 | MS.gene041179:CDS |
| TCAATTTCTGGCCTCAAGTT+GGG | 0.412121 | 5.1:-10876399 | None:intergenic |
| TTCTTGCAAACATCACATCT+TGG | 0.412310 | 5.1:-10874375 | None:intergenic |
| CTTTCAACATGGAAAAGTTC+CGG | 0.413229 | 5.1:-10876712 | None:intergenic |
| TTCAATTTCTGGCCTCAAGT+TGG | 0.417922 | 5.1:-10876400 | None:intergenic |
| ATGGAAAAGTTCCGGTCAAA+TGG | 0.421969 | 5.1:-10876704 | None:intergenic |
| ACATGGTGATGATAGAATTT+GGG | 0.426199 | 5.1:+10872541 | MS.gene041179:CDS |
| CTGAGTGCAGGATGATTTGC+CGG | 0.446222 | 5.1:+10872696 | MS.gene041179:intron |
| TCTTGCAAACATCACATCTT+GGG | 0.448902 | 5.1:-10874374 | None:intergenic |
| GTGATGCTTCTCCCTGTAGC+AGG | 0.451634 | 5.1:-10874352 | None:intergenic |
| TGAAGGTTTAAATATGAAAG+TGG | 0.460205 | 5.1:+10875670 | MS.gene041179:CDS |
| CTAACCTCATAATCAGTGAT+TGG | 0.460726 | 5.1:-10874129 | None:intergenic |
| CGGTCAAATGGATATGATCA+AGG | 0.464591 | 5.1:-10876692 | None:intergenic |
| GGCTGTCACTTCGCATCGAC+GGG | 0.470821 | 5.1:-10876109 | None:intergenic |
| TCTGCCAATCACTGATTATG+AGG | 0.478761 | 5.1:+10874125 | MS.gene041179:CDS |
| TATGTTTATAGATTGTTGAC+AGG | 0.479289 | 5.1:+10876230 | MS.gene041179:intron |
| TTTCTCTGCAGAATCTGTGC+TGG | 0.480650 | 5.1:+10874015 | MS.gene041179:intron |
| TGGTTTACAAAGTTTCTCAA+TGG | 0.483060 | 5.1:+10872479 | MS.gene041179:CDS |
| GCAGATGGCAAGCATGGCAT+TGG | 0.483972 | 5.1:-10874107 | None:intergenic |
| GTGAGGTATCTGACTCAATC+TGG | 0.485020 | 5.1:-10876605 | None:intergenic |
| GCTGGATGCAATGCTGAGAT+TGG | 0.485337 | 5.1:+10874033 | MS.gene041179:CDS |
| TTGTTGTAGCTGCGAAAGAA+TGG | 0.486878 | 5.1:+10875412 | MS.gene041179:CDS |
| GTATTTCATGGTAGAGAGGT+TGG | 0.496331 | 5.1:-10875637 | None:intergenic |
| TCAGATACCTCACCAGCCTA+TGG | 0.497390 | 5.1:+10876615 | MS.gene041179:CDS |
| ATGAGGCCAGCTGAATTAGC+CGG | 0.498369 | 5.1:-10875320 | None:intergenic |
| AGATAATGCATGCATGGCTC+AGG | 0.501774 | 5.1:+10876270 | MS.gene041179:CDS |
| GTGTTCTGCATCATCGAAGA+AGG | 0.503016 | 5.1:+10876536 | MS.gene041179:CDS |
| CAGAGCTCTATTCTGGATCT+GGG | 0.507459 | 5.1:+10876463 | MS.gene041179:CDS |
| TCTCCCCACCTCTTTCCACC+AGG | 0.509167 | 5.1:+10873334 | MS.gene041179:CDS |
| CTTGATCATATCCATTTGAC+CGG | 0.509477 | 5.1:+10876693 | MS.gene041179:CDS |
| CTGAAAGGGAAGAAAGTTGT+TGG | 0.513320 | 5.1:+10872775 | MS.gene041179:CDS |
| ATATATAATTACCTGAATCC+TGG | 0.513713 | 5.1:-10873352 | None:intergenic |
| TGGATTCAGATCGGGTTACC+AGG | 0.515296 | 5.1:+10876641 | MS.gene041179:CDS |
| ATTCAATTAAGTTTGAGCAC+TGG | 0.516076 | 5.1:+10873271 | MS.gene041179:CDS |
| CTTACCATAAATCCTGCTAC+AGG | 0.517147 | 5.1:+10874340 | MS.gene041179:CDS |
| CAGATCCCGGCTAATTCAGC+TGG | 0.521586 | 5.1:+10875314 | MS.gene041179:intron |
| CTGTAGCAGGATTTATGGTA+AGG | 0.522745 | 5.1:-10874339 | None:intergenic |
| GGTGGAAAGAGGTGGGGAGA+AGG | 0.524431 | 5.1:-10873331 | None:intergenic |
| GCACTAAATGAGGCCATTGA+GGG | 0.528915 | 5.1:+10875728 | MS.gene041179:CDS |
| GTGCTGTCGAGCTCATGCGT+TGG | 0.530772 | 5.1:-10875383 | None:intergenic |
| TATGGAGATGGATTCAGATC+GGG | 0.531474 | 5.1:+10876633 | MS.gene041179:CDS |
| ACCTCACCAGCCTATGGAGA+TGG | 0.534287 | 5.1:+10876621 | MS.gene041179:CDS |
| CCTCAAGTTGATCTTTGGCA+CGG | 0.534386 | 5.1:-10873225 | None:intergenic |
| CTGAATCCATCTCCATAGGC+TGG | 0.535577 | 5.1:-10876627 | None:intergenic |
| GACGAGGAAGATGAGAATGT+TGG | 0.536005 | 5.1:+10873142 | MS.gene041179:CDS |
| ACCTGAATCCTGGTGGAAAG+AGG | 0.537281 | 5.1:-10873342 | None:intergenic |
| CGATCTGAATCCATCTCCAT+AGG | 0.537412 | 5.1:-10876631 | None:intergenic |
| TGGCTGTCACTTCGCATCGA+CGG | 0.539258 | 5.1:-10876110 | None:intergenic |
| CTCATGAGATAATGCATGCA+TGG | 0.539682 | 5.1:+10876264 | MS.gene041179:CDS |
| CCTTCTAGCTAAAATTCAGC+AGG | 0.540630 | 5.1:+10873189 | MS.gene041179:CDS |
| AGCACTAAATGAGGCCATTG+AGG | 0.541852 | 5.1:+10875727 | MS.gene041179:CDS |
| TATCAGAGGAGGATCTGAAA+GGG | 0.551935 | 5.1:+10872761 | MS.gene041179:CDS |
| TGTTATATGGTTACCTAGGA+AGG | 0.552829 | 5.1:-10876149 | None:intergenic |
| GAATCCTGGTGGAAAGAGGT+GGG | 0.554764 | 5.1:-10873338 | None:intergenic |
| CATGCATTATCTCATGAGCT+AGG | 0.555420 | 5.1:-10876259 | None:intergenic |
| CTATCAGAGGAGGATCTGAA+AGG | 0.555665 | 5.1:+10872760 | MS.gene041179:CDS |
| AGAAAACCAAGTATAGGGGC+AGG | 0.561310 | 5.1:+10876045 | MS.gene041179:CDS |
| TGAGGCCAGCTGAATTAGCC+GGG | 0.562601 | 5.1:-10875319 | None:intergenic |
| TTGAGGCCAGAAATTGAAGA+AGG | 0.563599 | 5.1:+10876405 | MS.gene041179:CDS |
| TGATTGGCAGATGGCAAGCA+TGG | 0.564914 | 5.1:-10874113 | None:intergenic |
| GGGCAATACAATGGCAAACA+TGG | 0.564946 | 5.1:+10872524 | MS.gene041179:CDS |
| ACGGGTCAGTCTATAAGGCT+TGG | 0.569106 | 5.1:-10876091 | None:intergenic |
| TTTAAGAAAACCAAGTATAG+GGG | 0.569581 | 5.1:+10876041 | MS.gene041179:CDS |
| GTAAGGACGGTTGCTAGACA+TGG | 0.570040 | 5.1:-10874322 | None:intergenic |
| TGAATCCTGGTGGAAAGAGG+TGG | 0.571390 | 5.1:-10873339 | None:intergenic |
| GCCCATACTTAAGTACCGCC+TGG | 0.571618 | 5.1:-10876659 | None:intergenic |
| AGGAAGACGAGCAACTTGCA+AGG | 0.572451 | 5.1:+10873245 | MS.gene041179:CDS |
| AGGAATTCCTACGGTGGTGA+CGG | 0.573043 | 5.1:-10875924 | None:intergenic |
| TCTAGTATTTCATGGTAGAG+AGG | 0.573281 | 5.1:-10875641 | None:intergenic |
| CTATGGAGATGGATTCAGAT+CGG | 0.581389 | 5.1:+10876632 | MS.gene041179:CDS |
| TGCAATGCTGAGATTGGCCA+TGG | 0.581581 | 5.1:+10874039 | MS.gene041179:CDS |
| TGTCTTTCCACCAAAAGCAT+AGG | 0.584605 | 5.1:-10875704 | None:intergenic |
| ACCAGGCGGTACTTAAGTAT+GGG | 0.585146 | 5.1:+10876658 | MS.gene041179:CDS |
| TTATAGGTTATCCCAACTTG+AGG | 0.585861 | 5.1:+10876388 | MS.gene041179:intron |
| TGGTTATCATGTCTGTGACT+CGG | 0.588138 | 5.1:-10876071 | None:intergenic |
| AGAAGGAATCTGTCAAGTGT+TGG | 0.595703 | 5.1:+10876422 | MS.gene041179:CDS |
| GGAAAGACAAGCACTAAATG+AGG | 0.596661 | 5.1:+10875718 | MS.gene041179:CDS |
| AAGGCCATACAAAACAAGAA+TGG | 0.597233 | 5.1:-10876130 | None:intergenic |
| GGAAGACGAGCAACTTGCAA+GGG | 0.598064 | 5.1:+10873246 | MS.gene041179:CDS |
| AGCAGGATTTATGGTAAGGA+CGG | 0.599912 | 5.1:-10874335 | None:intergenic |
| TCCATCTCCATAGGCTGGTG+AGG | 0.600925 | 5.1:-10876622 | None:intergenic |
| CATAATCAGTGATTGGCAGA+TGG | 0.606004 | 5.1:-10874122 | None:intergenic |
| GTCAAGTGTTGGCTCATATG+TGG | 0.608811 | 5.1:+10876433 | MS.gene041179:CDS |
| GGTCAAATGGATATGATCAA+GGG | 0.611026 | 5.1:-10876691 | None:intergenic |
| TGCACTCTCTCTATCAGAGG+AGG | 0.611907 | 5.1:+10872750 | MS.gene041179:CDS |
| ACTGGTTCTCCTCCTCGACA+TGG | 0.617399 | 5.1:+10873289 | MS.gene041179:CDS |
| TTCTTCGATGATGCAGAACA+CGG | 0.620817 | 5.1:-10876534 | None:intergenic |
| TATAATTACCTGAATCCTGG+TGG | 0.627643 | 5.1:-10873349 | None:intergenic |
| AATCCTGGTGGAAAGAGGTG+GGG | 0.630175 | 5.1:-10873337 | None:intergenic |
| TAGCTTTCAAACTTTCAACA+TGG | 0.634802 | 5.1:-10876723 | None:intergenic |
| AGAGAATCTTTGCCATGTCG+AGG | 0.635073 | 5.1:-10873301 | None:intergenic |
| GATGAGCTCTATACTCAATG+AGG | 0.636611 | 5.1:-10875337 | None:intergenic |
| ATTTCAGGAGGGCAATACAA+TGG | 0.636955 | 5.1:+10872515 | MS.gene041179:CDS |
| TTACCATAAATCCTGCTACA+GGG | 0.641135 | 5.1:+10874341 | MS.gene041179:CDS |
| GGATAATCATCATAGTTCAG+TGG | 0.641892 | 5.1:+10872562 | MS.gene041179:CDS |
| GCATGGCATTGGAAGCATTG+TGG | 0.647853 | 5.1:-10874096 | None:intergenic |
| GATGAAGACGAAGACGAAGG+CGG | 0.650656 | 5.1:-10876498 | None:intergenic |
| CACCATTTACCTGAAACTAG+AGG | 0.653687 | 5.1:+10875878 | MS.gene041179:CDS |
| AATTGCACTCTCTCTATCAG+AGG | 0.658444 | 5.1:+10872747 | MS.gene041179:CDS |
| TGTTCTGCATCATCGAAGAA+GGG | 0.659899 | 5.1:+10876537 | MS.gene041179:CDS |
| TCTAATCATAGAATTTCAGG+AGG | 0.660809 | 5.1:+10872503 | MS.gene041179:CDS |
| GAATCTTTGCCATGTCGAGG+AGG | 0.671664 | 5.1:-10873298 | None:intergenic |
| TTGTAGCTGCGAAAGAATGG+AGG | 0.672189 | 5.1:+10875415 | MS.gene041179:CDS |
| GATGATGAAGACGAAGACGA+AGG | 0.677210 | 5.1:-10876501 | None:intergenic |
| CCGTGCCAAAGATCAACTTG+AGG | 0.706058 | 5.1:+10873225 | MS.gene041179:CDS |
| ACAACTTTGTAAAATTGACG+AGG | 0.708039 | 5.1:+10873126 | MS.gene041179:CDS |
| CTAATCATAGAATTTCAGGA+GGG | 0.718623 | 5.1:+10872504 | MS.gene041179:CDS |
| CTTTCGCAGCTACAACAACG+AGG | 0.721804 | 5.1:-10875407 | None:intergenic |
| TTCGATGATGCAGAACACGG+CGG | 0.732822 | 5.1:-10876531 | None:intergenic |
| ATTCAGATCGGGTTACCAGG+CGG | 0.751020 | 5.1:+10876644 | MS.gene041179:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTACTTAATAAGTTAT+AGG | - | chr5.1:10875015-10875034 | None:intergenic | 10.0% |
| !!! | AAGTAAATAATTCAATTTTT+AGG | - | chr5.1:10873906-10873925 | None:intergenic | 10.0% |
| !!! | TTTGAATCATTTTATATAAT+CGG | + | chr5.1:10873647-10873666 | MS.gene041179:intron | 10.0% |
| !! | AAGATTTGTGAATTATATAA+CGG | + | chr5.1:10875991-10876010 | MS.gene041179:intron | 15.0% |
| !! | ACAATTATTAGATTTCAAAT+AGG | - | chr5.1:10874883-10874902 | None:intergenic | 15.0% |
| !! | TTAATGTGTATAAGAAATAT+GGG | + | chr5.1:10872871-10872890 | MS.gene041179:intron | 15.0% |
| !! | TTATGAAGATTATATCTATA+TGG | - | chr5.1:10873812-10873831 | None:intergenic | 15.0% |
| !!! | GATTTTCATAAAAAAGTATT+TGG | - | chr5.1:10873407-10873426 | None:intergenic | 15.0% |
| !!! | TACTTAGATTTTATTAACTA+AGG | - | chr5.1:10873761-10873780 | None:intergenic | 15.0% |
| !!! | TATTAAGTATTTCTGAATTA+TGG | + | chr5.1:10873522-10873541 | MS.gene041179:intron | 15.0% |
| !!! | TTGAATCATTTTATATAATC+GGG | + | chr5.1:10873648-10873667 | MS.gene041179:intron | 15.0% |
| !! | AAAAAAATCGTGAGATATAA+CGG | - | chr5.1:10873840-10873859 | None:intergenic | 20.0% |
| !! | ATAGTTTGAATATGTAATTG+TGG | + | chr5.1:10872669-10872688 | MS.gene041179:intron | 20.0% |
| !! | CAATACGATTATGAATAATA+CGG | + | chr5.1:10874273-10874292 | MS.gene041179:intron | 20.0% |
| !! | CATAAAATTCTAGTATTTCA+TGG | - | chr5.1:10875652-10875671 | None:intergenic | 20.0% |
| !! | CATAAATTAGAATAGATACT+AGG | - | chr5.1:10875508-10875527 | None:intergenic | 20.0% |
| !! | CTAGTATCTATTCTAATTTA+TGG | + | chr5.1:10875506-10875525 | MS.gene041179:intron | 20.0% |
| !! | GTTAATGTGTATAAGAAATA+TGG | + | chr5.1:10872870-10872889 | MS.gene041179:intron | 20.0% |
| !! | GTTGTTCATTTGTTTAAATA+TGG | - | chr5.1:10873977-10873996 | None:intergenic | 20.0% |
| !! | TAATGTGTATAAGAAATATG+GGG | + | chr5.1:10872872-10872891 | MS.gene041179:intron | 20.0% |
| !! | TTAAAACATTAATAGCAACT+GGG | + | chr5.1:10875171-10875190 | MS.gene041179:intron | 20.0% |
| !! | TTTCAATTTCTTACTAATGA+AGG | - | chr5.1:10872601-10872620 | None:intergenic | 20.0% |
| !!! | AAAAGATATTTTGAATCCTT+TGG | - | chr5.1:10875551-10875570 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTTCTTGATGA+TGG | + | chr5.1:10875560-10875579 | MS.gene041179:CDS | 20.0% |
| !!! | ATTTTAAGAAAACCAAGTAT+AGG | + | chr5.1:10876039-10876058 | MS.gene041179:CDS | 20.0% |
| !!! | GAAATACTAGAATTTTATGA+AGG | + | chr5.1:10875653-10875672 | MS.gene041179:CDS | 20.0% |
| !!! | TTTTAAGAAAACCAAGTATA+GGG | + | chr5.1:10876040-10876059 | MS.gene041179:CDS | 20.0% |
| !!! | TTTTACTTATACTTTGGTAT+GGG | - | chr5.1:10873046-10873065 | None:intergenic | 20.0% |
| ! | AAAGTAACAACTCTTAAGTT+AGG | - | chr5.1:10875833-10875852 | None:intergenic | 25.0% |
| ! | ATAACTATGACTGAAATTTG+AGG | - | chr5.1:10874952-10874971 | None:intergenic | 25.0% |
| ! | ATATATAATTACCTGAATCC+TGG | - | chr5.1:10873355-10873374 | None:intergenic | 25.0% |
| ! | ATCCATGAACATATGAAAAT+AGG | - | chr5.1:10873946-10873965 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGAACATG+AGG | - | chr5.1:10873071-10873090 | None:intergenic | 25.0% |
| ! | CATACCAAAGTATAAGTAAA+AGG | + | chr5.1:10873045-10873064 | MS.gene041179:intron | 25.0% |
| ! | CTTTCACTGTATATAATTCA+AGG | + | chr5.1:10876203-10876222 | MS.gene041179:intron | 25.0% |
| ! | GTTAAAACATTAATAGCAAC+TGG | + | chr5.1:10875170-10875189 | MS.gene041179:intron | 25.0% |
| ! | GTTTATCATGTTTCATATCA+TGG | - | chr5.1:10873704-10873723 | None:intergenic | 25.0% |
| ! | GTTTCATAACATATTCTGTT+TGG | - | chr5.1:10873496-10873515 | None:intergenic | 25.0% |
| ! | TAAAACATTAATAGCAACTG+GGG | + | chr5.1:10875172-10875191 | MS.gene041179:intron | 25.0% |
| ! | TAGTTGTTCATTTCAATAAC+TGG | + | chr5.1:10874786-10874805 | MS.gene041179:intron | 25.0% |
| ! | TATCATATGCTTGAAATATG+AGG | + | chr5.1:10874975-10874994 | MS.gene041179:intron | 25.0% |
| ! | TATGTTTATAGATTGTTGAC+AGG | + | chr5.1:10876230-10876249 | MS.gene041179:intron | 25.0% |
| ! | TCAGAAATACTTAATAACTG+AGG | - | chr5.1:10873518-10873537 | None:intergenic | 25.0% |
| ! | TGAAGGTTTAAATATGAAAG+TGG | + | chr5.1:10875670-10875689 | MS.gene041179:CDS | 25.0% |
| ! | TGTTTCCTAATTAGTAACAA+CGG | - | chr5.1:10875472-10875491 | None:intergenic | 25.0% |
| ! | TTTAAGAAAACCAAGTATAG+GGG | + | chr5.1:10876041-10876060 | MS.gene041179:CDS | 25.0% |
| !! | AAAAAGTGTAAAGGAAAACA+AGG | - | chr5.1:10873603-10873622 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAAGGAAAACAA+GGG | - | chr5.1:10873602-10873621 | None:intergenic | 25.0% |
| !! | ATCCTATTTTCATATGTTCA+TGG | + | chr5.1:10873941-10873960 | MS.gene041179:intron | 25.0% |
| !! | CTTTTACTTATACTTTGGTA+TGG | - | chr5.1:10873047-10873066 | None:intergenic | 25.0% |
| !! | TAAGAAATATGGGGATATTT+TGG | + | chr5.1:10872881-10872900 | MS.gene041179:intron | 25.0% |
| !!! | TACAATTTTTCTGAGACTTA+AGG | + | chr5.1:10872644-10872663 | MS.gene041179:intron | 25.0% |
| !!! | TACTTGGTTTTCTTAAAATC+TGG | - | chr5.1:10876038-10876057 | None:intergenic | 25.0% |
| !!! | TTCTGTTTGGCAATATTTTT+TGG | - | chr5.1:10873483-10873502 | None:intergenic | 25.0% |
| AAACAAATGAACAACATACC+TGG | + | chr5.1:10873982-10874001 | MS.gene041179:intron | 30.0% | |
| AAAGTGTAAAGGAAAACAAG+GGG | - | chr5.1:10873601-10873620 | None:intergenic | 30.0% | |
| AACTATATCCAACTCATGAA+GGG | - | chr5.1:10874771-10874790 | None:intergenic | 30.0% | |
| AATGACTGCTTCATATATTC+TGG | + | chr5.1:10874731-10874750 | MS.gene041179:intron | 30.0% | |
| ACAACTTTGTAAAATTGACG+AGG | + | chr5.1:10873126-10873145 | MS.gene041179:CDS | 30.0% | |
| ACTCAGCAATTCATTAGTTA+GGG | + | chr5.1:10874215-10874234 | MS.gene041179:intron | 30.0% | |
| AGTTTGAAAAGAGTCGAATT+TGG | - | chr5.1:10875955-10875974 | None:intergenic | 30.0% | |
| ATCAAAGTAGTCTCTTATCA+TGG | + | chr5.1:10874462-10874481 | MS.gene041179:intron | 30.0% | |
| ATTCAATTAAGTTTGAGCAC+TGG | + | chr5.1:10873271-10873290 | MS.gene041179:CDS | 30.0% | |
| ATTTACTTTGTCACGAAACA+TGG | + | chr5.1:10873918-10873937 | MS.gene041179:intron | 30.0% | |
| ATTTCTTGCATGATGTTATC+AGG | - | chr5.1:10876318-10876337 | None:intergenic | 30.0% | |
| CTAATCATAGAATTTCAGGA+GGG | + | chr5.1:10872504-10872523 | MS.gene041179:CDS | 30.0% | |
| GAAAACTGTAAAGGAACAAA+TGG | - | chr5.1:10874303-10874322 | None:intergenic | 30.0% | |
| GTTTCCTAATTAGTAACAAC+GGG | - | chr5.1:10875471-10875490 | None:intergenic | 30.0% | |
| TACTCAGCAATTCATTAGTT+AGG | + | chr5.1:10874214-10874233 | MS.gene041179:intron | 30.0% | |
| TCAGAGATTTAGTACATATG+CGG | + | chr5.1:10873555-10873574 | MS.gene041179:intron | 30.0% | |
| TCTAATCATAGAATTTCAGG+AGG | + | chr5.1:10872503-10872522 | MS.gene041179:CDS | 30.0% | |
| TGCAACTTAAAAATCTTCCA+TGG | - | chr5.1:10874059-10874078 | None:intergenic | 30.0% | |
| TGGTTTACAAAGTTTCTCAA+TGG | + | chr5.1:10872479-10872498 | MS.gene041179:CDS | 30.0% | |
| TTGCTTCACTATTGAATGTA+GGG | + | chr5.1:10875851-10875870 | MS.gene041179:intron | 30.0% | |
| TTGTGAAAGCAGATGTTATA+TGG | - | chr5.1:10876165-10876184 | None:intergenic | 30.0% | |
| TTTATCTCATAATGTCTCAG+AGG | + | chr5.1:10873078-10873097 | MS.gene041179:intron | 30.0% | |
| TTTCTTGCATGATGTTATCA+GGG | - | chr5.1:10876317-10876336 | None:intergenic | 30.0% | |
| TTTGCTTCACTATTGAATGT+AGG | + | chr5.1:10875850-10875869 | MS.gene041179:intron | 30.0% | |
| ! | AACATGGTGATGATAGAATT+TGG | + | chr5.1:10872540-10872559 | MS.gene041179:CDS | 30.0% |
| ! | AAGAGGACAAAAAAGTGTAA+AGG | - | chr5.1:10873612-10873631 | None:intergenic | 30.0% |
| ! | ACATGGTGATGATAGAATTT+GGG | + | chr5.1:10872541-10872560 | MS.gene041179:CDS | 30.0% |
| ! | ACTGAAATTTGAGGTTAATC+AGG | - | chr5.1:10874943-10874962 | None:intergenic | 30.0% |
| ! | TCATGTTAGTTTCTCTTTAC+AGG | - | chr5.1:10874906-10874925 | None:intergenic | 30.0% |
| ! | TGATAGACATGTCATTGTTT+TGG | - | chr5.1:10875228-10875247 | None:intergenic | 30.0% |
| ! | TGGGTAACATATGTTTCTAA+TGG | + | chr5.1:10872941-10872960 | MS.gene041179:intron | 30.0% |
| !! | CAGTATTTTTGTATCCAGAA+AGG | - | chr5.1:10875362-10875381 | None:intergenic | 30.0% |
| !! | TCTGATTTTGAGAAGAAACT+TGG | + | chr5.1:10876567-10876586 | MS.gene041179:CDS | 30.0% |
| !! | TTGGATTTGCTAATCAGATA+AGG | - | chr5.1:10873388-10873407 | None:intergenic | 30.0% |
| !!! | GGAAGATTTTTAAGTTGCAT+GGG | + | chr5.1:10874060-10874079 | MS.gene041179:CDS | 30.0% |
| !!! | TGGAAGATTTTTAAGTTGCA+TGG | + | chr5.1:10874059-10874078 | MS.gene041179:CDS | 30.0% |
| AACAGTATTGCCATTGTGAA+AGG | + | chr5.1:10873721-10873740 | MS.gene041179:intron | 35.0% | |
| AAGGCCATACAAAACAAGAA+TGG | - | chr5.1:10876133-10876152 | None:intergenic | 35.0% | |
| AAGTGTAAAGGAAAACAAGG+GGG | - | chr5.1:10873600-10873619 | None:intergenic | 35.0% | |
| ACAGTATTGCCATTGTGAAA+GGG | + | chr5.1:10873722-10873741 | MS.gene041179:intron | 35.0% | |
| ACCTAATAAAGTGGACGATA+AGG | + | chr5.1:10873446-10873465 | MS.gene041179:intron | 35.0% | |
| AGCTTCTTAAACATTGAGGT+TGG | - | chr5.1:10874649-10874668 | None:intergenic | 35.0% | |
| AGTTAAGTTCCAACTCAAAG+TGG | + | chr5.1:10872921-10872940 | MS.gene041179:intron | 35.0% | |
| ATAACAGAAAGACAGAAGGA+GGG | - | chr5.1:10875810-10875829 | None:intergenic | 35.0% | |
| ATATGTTACCCACTTTGAGT+TGG | - | chr5.1:10872933-10872952 | None:intergenic | 35.0% | |
| CAACTATATCCAACTCATGA+AGG | - | chr5.1:10874772-10874791 | None:intergenic | 35.0% | |
| CAGATGTTATATGGTTACCT+AGG | - | chr5.1:10876156-10876175 | None:intergenic | 35.0% | |
| CAGATTCCTTCTTCAATTTC+TGG | - | chr5.1:10876414-10876433 | None:intergenic | 35.0% | |
| CTAACCTCATAATCAGTGAT+TGG | - | chr5.1:10874132-10874151 | None:intergenic | 35.0% | |
| CTAATGGTTAGAGATCATTG+AGG | + | chr5.1:10872957-10872976 | MS.gene041179:intron | 35.0% | |
| CTAGACATGGAAAACTGTAA+AGG | - | chr5.1:10874312-10874331 | None:intergenic | 35.0% | |
| CTTGATCATATCCATTTGAC+CGG | + | chr5.1:10876693-10876712 | MS.gene041179:CDS | 35.0% | |
| GAACAGCTTCTTAAACATTG+AGG | - | chr5.1:10874653-10874672 | None:intergenic | 35.0% | |
| GCATATGTACTAAATCTCTG+AGG | - | chr5.1:10873556-10873575 | None:intergenic | 35.0% | |
| GCTTCATATATTCTGGTAAC+CGG | + | chr5.1:10874738-10874757 | MS.gene041179:intron | 35.0% | |
| GCTTCTTAAACATTGAGGTT+GGG | - | chr5.1:10874648-10874667 | None:intergenic | 35.0% | |
| GGATAATCATCATAGTTCAG+TGG | + | chr5.1:10872562-10872581 | MS.gene041179:CDS | 35.0% | |
| GGTCAAATGGATATGATCAA+GGG | - | chr5.1:10876694-10876713 | None:intergenic | 35.0% | |
| GTTAAGTTCCAACTCAAAGT+GGG | + | chr5.1:10872922-10872941 | MS.gene041179:intron | 35.0% | |
| GTTCATTTCAATAACTGGTC+TGG | + | chr5.1:10874791-10874810 | MS.gene041179:intron | 35.0% | |
| TAGGATAACAGAAAGACAGA+AGG | - | chr5.1:10875814-10875833 | None:intergenic | 35.0% | |
| TATAATTACCTGAATCCTGG+TGG | - | chr5.1:10873352-10873371 | None:intergenic | 35.0% | |
| TATTCTTCCATTACAGATCC+CGG | + | chr5.1:10875301-10875320 | MS.gene041179:intron | 35.0% | |
| TCTAGTATTTCATGGTAGAG+AGG | - | chr5.1:10875644-10875663 | None:intergenic | 35.0% | |
| TCTCACTTCTCAAAAATGTG+AGG | + | chr5.1:10874671-10874690 | MS.gene041179:intron | 35.0% | |
| TCTTGCAAACATCACATCTT+GGG | - | chr5.1:10874377-10874396 | None:intergenic | 35.0% | |
| TGTTATATGGTTACCTAGGA+AGG | - | chr5.1:10876152-10876171 | None:intergenic | 35.0% | |
| TTACCATAAATCCTGCTACA+GGG | + | chr5.1:10874341-10874360 | MS.gene041179:CDS | 35.0% | |
| TTATAGGTTATCCCAACTTG+AGG | + | chr5.1:10876388-10876407 | MS.gene041179:intron | 35.0% | |
| TTCTTGCAAACATCACATCT+TGG | - | chr5.1:10874378-10874397 | None:intergenic | 35.0% | |
| TTTGGTATGGGATAGATGAT+CGG | - | chr5.1:10873034-10873053 | None:intergenic | 35.0% | |
| ! | ATGAACAACATACCTGGTTT+TGG | + | chr5.1:10873988-10874007 | MS.gene041179:intron | 35.0% |
| ! | CAGAGAAATTTTCCAAAACC+AGG | - | chr5.1:10874003-10874022 | None:intergenic | 35.0% |
| ! | GAGGCCTTTTACTTATACTT+TGG | - | chr5.1:10873052-10873071 | None:intergenic | 35.0% |
| ! | GGCTCTAATCATAGAATTTC+AGG | + | chr5.1:10872500-10872519 | MS.gene041179:CDS | 35.0% |
| !!! | ACAGCCATTCTTGTTTTGTA+TGG | + | chr5.1:10876126-10876145 | MS.gene041179:CDS | 35.0% |
| !!! | AGATTTTTAAGTTGCATGGG+AGG | + | chr5.1:10874063-10874082 | MS.gene041179:CDS | 35.0% |
| !!! | ATGTCTTCTTTTTCGACATC+CGG | - | chr5.1:10872718-10872737 | None:intergenic | 35.0% |
| !!! | ATTTTTAAGTTGCATGGGAG+GGG | + | chr5.1:10874065-10874084 | MS.gene041179:CDS | 35.0% |
| !!! | CATGTCATTGTTTTGGTAAG+AGG | - | chr5.1:10875221-10875240 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTCCTCTTTCTCA+TGG | + | chr5.1:10873617-10873636 | MS.gene041179:intron | 35.0% |
| !!! | GATTTTTAAGTTGCATGGGA+GGG | + | chr5.1:10874064-10874083 | MS.gene041179:CDS | 35.0% |
| !!! | TGAAGGCATTGAATTTTGGA+AGG | - | chr5.1:10875098-10875117 | None:intergenic | 35.0% |
| !!! | TGGTTGAAGGCATTGAATTT+TGG | - | chr5.1:10875102-10875121 | None:intergenic | 35.0% |
| AAATGTCGTCCATGAGAAAG+AGG | - | chr5.1:10873629-10873648 | None:intergenic | 40.0% | |
| AAGAGTCGAATTTGGAAGCA+AGG | - | chr5.1:10875947-10875966 | None:intergenic | 40.0% | |
| AATACTCGAGTATGTTCTGC+TGG | + | chr5.1:10874702-10874721 | MS.gene041179:intron | 40.0% | |
| AATTCAATGCCTTCAACCAC+AGG | + | chr5.1:10875103-10875122 | MS.gene041179:intron | 40.0% | |
| AATTGCACTCTCTCTATCAG+AGG | + | chr5.1:10872747-10872766 | MS.gene041179:CDS | 40.0% | |
| ACACAAAACCCCTTTCACAA+TGG | - | chr5.1:10873734-10873753 | None:intergenic | 40.0% | |
| AGAAGGAATCTGTCAAGTGT+TGG | + | chr5.1:10876422-10876441 | MS.gene041179:CDS | 40.0% | |
| AGCAGGATTTATGGTAAGGA+CGG | - | chr5.1:10874338-10874357 | None:intergenic | 40.0% | |
| AGTATAGAGCTCATCCTTTC+TGG | + | chr5.1:10875345-10875364 | MS.gene041179:CDS | 40.0% | |
| AGTGTAAAGGAAAACAAGGG+GGG | - | chr5.1:10873599-10873618 | None:intergenic | 40.0% | |
| ATACTCGAGTATGTTCTGCT+GGG | + | chr5.1:10874703-10874722 | MS.gene041179:intron | 40.0% | |
| ATCTCATAATGTCTCAGAGG+AGG | + | chr5.1:10873081-10873100 | MS.gene041179:intron | 40.0% | |
| ATGGAAAAGTTCCGGTCAAA+TGG | - | chr5.1:10876707-10876726 | None:intergenic | 40.0% | |
| ATTCAATGCCTTCAACCACA+GGG | + | chr5.1:10875104-10875123 | MS.gene041179:intron | 40.0% | |
| ATTTCAGGAGGGCAATACAA+TGG | + | chr5.1:10872515-10872534 | MS.gene041179:CDS | 40.0% | |
| CACCATTTACCTGAAACTAG+AGG | + | chr5.1:10875878-10875897 | MS.gene041179:CDS | 40.0% | |
| CAGTATTGCCATTGTGAAAG+GGG | + | chr5.1:10873723-10873742 | MS.gene041179:intron | 40.0% | |
| CATAATCAGTGATTGGCAGA+TGG | - | chr5.1:10874125-10874144 | None:intergenic | 40.0% | |
| CATGCATTATCTCATGAGCT+AGG | - | chr5.1:10876262-10876281 | None:intergenic | 40.0% | |
| CCATCCCGTTGTTACTAATT+AGG | + | chr5.1:10875464-10875483 | MS.gene041179:intron | 40.0% | |
| CCTAATTAGTAACAACGGGA+TGG | - | chr5.1:10875467-10875486 | None:intergenic | 40.0% | |
| CGGTCAAATGGATATGATCA+AGG | - | chr5.1:10876695-10876714 | None:intergenic | 40.0% | |
| CTCATGAGATAATGCATGCA+TGG | + | chr5.1:10876264-10876283 | MS.gene041179:CDS | 40.0% | |
| CTGAAAGGGAAGAAAGTTGT+TGG | + | chr5.1:10872775-10872794 | MS.gene041179:CDS | 40.0% | |
| CTGTAGCAGGATTTATGGTA+AGG | - | chr5.1:10874342-10874361 | None:intergenic | 40.0% | |
| CTTACCATAAATCCTGCTAC+AGG | + | chr5.1:10874340-10874359 | MS.gene041179:CDS | 40.0% | |
| GATAACAGAAAGACAGAAGG+AGG | - | chr5.1:10875811-10875830 | None:intergenic | 40.0% | |
| GATGAGCTCTATACTCAATG+AGG | - | chr5.1:10875340-10875359 | None:intergenic | 40.0% | |
| GCCTTATCGTCCACTTTATT+AGG | - | chr5.1:10873450-10873469 | None:intergenic | 40.0% | |
| GCTAGTTGCACCTAATAAAG+TGG | + | chr5.1:10873437-10873456 | MS.gene041179:intron | 40.0% | |
| GGAAAGACAAGCACTAAATG+AGG | + | chr5.1:10875718-10875737 | MS.gene041179:CDS | 40.0% | |
| GTATTTCATGGTAGAGAGGT+TGG | - | chr5.1:10875640-10875659 | None:intergenic | 40.0% | |
| GTCCCACATTGGATAACAAA+TGG | + | chr5.1:10874555-10874574 | MS.gene041179:intron | 40.0% | |
| GTGTCTAGACTCAGCAATTA+TGG | + | chr5.1:10875601-10875620 | MS.gene041179:CDS | 40.0% | |
| TATCAGAGGAGGATCTGAAA+GGG | + | chr5.1:10872761-10872780 | MS.gene041179:CDS | 40.0% | |
| TGCATGATGTTATCAGGGAA+CGG | - | chr5.1:10876312-10876331 | None:intergenic | 40.0% | |
| TGGTTATCATGTCTGTGACT+CGG | - | chr5.1:10876074-10876093 | None:intergenic | 40.0% | |
| TGTGTAAAAGAGTCCCACAT+TGG | + | chr5.1:10874544-10874563 | MS.gene041179:intron | 40.0% | |
| TGTTCTGCATCATCGAAGAA+GGG | + | chr5.1:10876537-10876556 | MS.gene041179:CDS | 40.0% | |
| TTCTTCGATGATGCAGAACA+CGG | - | chr5.1:10876537-10876556 | None:intergenic | 40.0% | |
| TTGAGGCCAGAAATTGAAGA+AGG | + | chr5.1:10876405-10876424 | MS.gene041179:CDS | 40.0% | |
| TTGGAAGCAAGGAATTCCTA+CGG | - | chr5.1:10875936-10875955 | None:intergenic | 40.0% | |
| TTGTTGTAGCTGCGAAAGAA+TGG | + | chr5.1:10875412-10875431 | MS.gene041179:CDS | 40.0% | |
| TTTCTAATCTGTGCAGCCAA+AGG | + | chr5.1:10875532-10875551 | MS.gene041179:intron | 40.0% | |
| ! | AACAACGGGATGGAATGTTT+TGG | - | chr5.1:10875457-10875476 | None:intergenic | 40.0% |
| ! | ACAACGGGATGGAATGTTTT+GGG | - | chr5.1:10875456-10875475 | None:intergenic | 40.0% |
| ! | CACATTCTTTTCTCCCTCAA+TGG | - | chr5.1:10875744-10875763 | None:intergenic | 40.0% |
| ! | CCTGAACATGTGTTTAGAGT+GGG | + | chr5.1:10874578-10874597 | MS.gene041179:intron | 40.0% |
| ! | CCTTCTAGCTAAAATTCAGC+AGG | + | chr5.1:10873189-10873208 | MS.gene041179:CDS | 40.0% |
| ! | CTATGGAGATGGATTCAGAT+CGG | + | chr5.1:10876632-10876651 | MS.gene041179:CDS | 40.0% |
| ! | CTGAACATGTGTTTAGAGTG+GGG | + | chr5.1:10874579-10874598 | MS.gene041179:intron | 40.0% |
| ! | GTCCTCTAGTTTCAGGTAAA+TGG | - | chr5.1:10875883-10875902 | None:intergenic | 40.0% |
| ! | TATGGAGATGGATTCAGATC+GGG | + | chr5.1:10876633-10876652 | MS.gene041179:CDS | 40.0% |
| ! | TCTGCCAATCACTGATTATG+AGG | + | chr5.1:10874125-10874144 | MS.gene041179:CDS | 40.0% |
| ! | TGAACATGTGTTTAGAGTGG+GGG | + | chr5.1:10874580-10874599 | MS.gene041179:intron | 40.0% |
| ! | TGTCTTTCCACCAAAAGCAT+AGG | - | chr5.1:10875707-10875726 | None:intergenic | 40.0% |
| !! | AGGCCATTTGTTATCCAATG+TGG | - | chr5.1:10874561-10874580 | None:intergenic | 40.0% |
| !! | GGCATTGAATTTTGGAAGGA+AGG | - | chr5.1:10875094-10875113 | None:intergenic | 40.0% |
| !! | GGCCATTTGTTATCCAATGT+GGG | - | chr5.1:10874560-10874579 | None:intergenic | 40.0% |
| !! | GTCTTCCTCAAGTTGATCTT+TGG | - | chr5.1:10873233-10873252 | None:intergenic | 40.0% |
| !! | TCAATTTCTGGCCTCAAGTT+GGG | - | chr5.1:10876402-10876421 | None:intergenic | 40.0% |
| !! | TTCAATTTCTGGCCTCAAGT+TGG | - | chr5.1:10876403-10876422 | None:intergenic | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr5.1:10876136-10876155 | MS.gene041179:CDS | 40.0% |
| !!! | CCTGCTGAATTTTAGCTAGA+AGG | - | chr5.1:10873192-10873211 | None:intergenic | 40.0% |
| AATTGTGGTGAACTGAGTGC+AGG | + | chr5.1:10872684-10872703 | MS.gene041179:intron | 45.0% | |
| ACCAGGCGGTACTTAAGTAT+GGG | + | chr5.1:10876658-10876677 | MS.gene041179:CDS | 45.0% | |
| AGAAAACCAAGTATAGGGGC+AGG | + | chr5.1:10876045-10876064 | MS.gene041179:CDS | 45.0% | |
| AGAGAATCTTTGCCATGTCG+AGG | - | chr5.1:10873304-10873323 | None:intergenic | 45.0% | |
| AGATAATGCATGCATGGCTC+AGG | + | chr5.1:10876270-10876289 | MS.gene041179:CDS | 45.0% | |
| AGCACTAAATGAGGCCATTG+AGG | + | chr5.1:10875727-10875746 | MS.gene041179:CDS | 45.0% | |
| ATATATTCTGGTAACCGGCC+TGG | + | chr5.1:10874743-10874762 | MS.gene041179:intron | 45.0% | |
| CCCACTCTAAACACATGTTC+AGG | - | chr5.1:10874581-10874600 | None:intergenic | 45.0% | |
| CGATCTGAATCCATCTCCAT+AGG | - | chr5.1:10876634-10876653 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | - | chr5.1:10874624-10874643 | None:intergenic | 45.0% | |
| CTATCAGAGGAGGATCTGAA+AGG | + | chr5.1:10872760-10872779 | MS.gene041179:CDS | 45.0% | |
| GAATTAGCCGGGATCTGTAA+TGG | - | chr5.1:10875311-10875330 | None:intergenic | 45.0% | |
| GACGAGGAAGATGAGAATGT+TGG | + | chr5.1:10873142-10873161 | MS.gene041179:CDS | 45.0% | |
| GATGATGAAGACGAAGACGA+AGG | - | chr5.1:10876504-10876523 | None:intergenic | 45.0% | |
| GCACTAAATGAGGCCATTGA+GGG | + | chr5.1:10875728-10875747 | MS.gene041179:CDS | 45.0% | |
| GCCTGAACATGTGTTTAGAG+TGG | + | chr5.1:10874577-10874596 | MS.gene041179:intron | 45.0% | |
| GCTGCAATGTACATATGCTC+TGG | + | chr5.1:10874503-10874522 | MS.gene041179:intron | 45.0% | |
| GGGCAATACAATGGCAAACA+TGG | + | chr5.1:10872524-10872543 | MS.gene041179:CDS | 45.0% | |
| GTGTTCTGCATCATCGAAGA+AGG | + | chr5.1:10876536-10876555 | MS.gene041179:CDS | 45.0% | |
| TACCAGGCGGTACTTAAGTA+TGG | + | chr5.1:10876657-10876676 | MS.gene041179:CDS | 45.0% | |
| TCTCCCTGTAGCAGGATTTA+TGG | - | chr5.1:10874347-10874366 | None:intergenic | 45.0% | |
| TGCTTTCACAATCTAGCGCT+TGG | + | chr5.1:10876174-10876193 | MS.gene041179:intron | 45.0% | |
| TGGTACTGTGGAACAGATCA+TGG | + | chr5.1:10874811-10874830 | MS.gene041179:intron | 45.0% | |
| TGTTGCATTCATACTCCCTG+TGG | - | chr5.1:10875122-10875141 | None:intergenic | 45.0% | |
| TTCATACTCCCTGTGGTTGA+AGG | - | chr5.1:10875115-10875134 | None:intergenic | 45.0% | |
| TTGTAGCTGCGAAAGAATGG+AGG | + | chr5.1:10875415-10875434 | MS.gene041179:CDS | 45.0% | |
| TTTCTCTGCAGAATCTGTGC+TGG | + | chr5.1:10874015-10874034 | MS.gene041179:intron | 45.0% | |
| ! | AAGCAGAGTCCTCTAGTTTC+AGG | - | chr5.1:10875890-10875909 | None:intergenic | 45.0% |
| ! | CAATAACTGGTCTGGTACTG+TGG | + | chr5.1:10874799-10874818 | MS.gene041179:intron | 45.0% |
| ! | GCAAGTTCCTATGCTTTTGG+TGG | + | chr5.1:10875697-10875716 | MS.gene041179:CDS | 45.0% |
| ! | GCAGCAAGTTCCTATGCTTT+TGG | + | chr5.1:10875694-10875713 | MS.gene041179:CDS | 45.0% |
| ! | GTGAGGTATCTGACTCAATC+TGG | - | chr5.1:10876608-10876627 | None:intergenic | 45.0% |
| ! | TGCAAGCAACAAGTGTTGTG+TGG | + | chr5.1:10875264-10875283 | MS.gene041179:intron | 45.0% |
| !! | CCTCAAGTTGATCTTTGGCA+CGG | - | chr5.1:10873228-10873247 | None:intergenic | 45.0% |
| !! | GTCAAGTGTTGGCTCATATG+TGG | + | chr5.1:10876433-10876452 | MS.gene041179:CDS | 45.0% |
| !!! | ATATATGTTTTTTTTTTTAT+AGG | + | chr5.1:10876372-10876391 | MS.gene041179:intron | 5.0% |
| AATCCTGGTGGAAAGAGGTG+GGG | - | chr5.1:10873340-10873359 | None:intergenic | 50.0% | |
| ACCTCTTTCCACCAGGATTC+AGG | + | chr5.1:10873341-10873360 | MS.gene041179:CDS | 50.0% | |
| ACCTGAATCCTGGTGGAAAG+AGG | - | chr5.1:10873345-10873364 | None:intergenic | 50.0% | |
| ACGGGTCAGTCTATAAGGCT+TGG | - | chr5.1:10876094-10876113 | None:intergenic | 50.0% | |
| AGGAAGACGAGCAACTTGCA+AGG | + | chr5.1:10873245-10873264 | MS.gene041179:CDS | 50.0% | |
| AGGAATTCCTACGGTGGTGA+CGG | - | chr5.1:10875927-10875946 | None:intergenic | 50.0% | |
| ATGAGGCCAGCTGAATTAGC+CGG | - | chr5.1:10875323-10875342 | None:intergenic | 50.0% | |
| ATTCAGATCGGGTTACCAGG+CGG | + | chr5.1:10876644-10876663 | MS.gene041179:CDS | 50.0% | |
| CATCGACGGGTCAGTCTATA+AGG | - | chr5.1:10876099-10876118 | None:intergenic | 50.0% | |
| CATGCATGGCTCAGGCTTAA+AGG | + | chr5.1:10876278-10876297 | MS.gene041179:CDS | 50.0% | |
| CCGTGCCAAAGATCAACTTG+AGG | + | chr5.1:10873225-10873244 | MS.gene041179:CDS | 50.0% | |
| CTGAATCCATCTCCATAGGC+TGG | - | chr5.1:10876630-10876649 | None:intergenic | 50.0% | |
| CTTTCGCAGCTACAACAACG+AGG | - | chr5.1:10875410-10875429 | None:intergenic | 50.0% | |
| GAAGCAAGGAATTCCTACGG+TGG | - | chr5.1:10875933-10875952 | None:intergenic | 50.0% | |
| GAATCCTGGTGGAAAGAGGT+GGG | - | chr5.1:10873341-10873360 | None:intergenic | 50.0% | |
| GAATCTTTGCCATGTCGAGG+AGG | - | chr5.1:10873301-10873320 | None:intergenic | 50.0% | |
| GATGAAGACGAAGACGAAGG+CGG | - | chr5.1:10876501-10876520 | None:intergenic | 50.0% | |
| GCTGGATGCAATGCTGAGAT+TGG | + | chr5.1:10874033-10874052 | MS.gene041179:CDS | 50.0% | |
| GGAAGACGAGCAACTTGCAA+GGG | + | chr5.1:10873246-10873265 | MS.gene041179:CDS | 50.0% | |
| GTAAGGACGGTTGCTAGACA+TGG | - | chr5.1:10874325-10874344 | None:intergenic | 50.0% | |
| TCAGATACCTCACCAGCCTA+TGG | + | chr5.1:10876615-10876634 | MS.gene041179:CDS | 50.0% | |
| TCCAACTCATGAAGGGATCC+AGG | - | chr5.1:10874764-10874783 | None:intergenic | 50.0% | |
| TGAATCCTGGTGGAAAGAGG+TGG | - | chr5.1:10873342-10873361 | None:intergenic | 50.0% | |
| TGATTGGCAGATGGCAAGCA+TGG | - | chr5.1:10874116-10874135 | None:intergenic | 50.0% | |
| TGCACTCTCTCTATCAGAGG+AGG | + | chr5.1:10872750-10872769 | MS.gene041179:CDS | 50.0% | |
| TGGATTCAGATCGGGTTACC+AGG | + | chr5.1:10876641-10876660 | MS.gene041179:CDS | 50.0% | |
| TTCGATGATGCAGAACACGG+CGG | - | chr5.1:10876534-10876553 | None:intergenic | 50.0% | |
| ! | CTGAGTGCAGGATGATTTGC+CGG | + | chr5.1:10872696-10872715 | MS.gene041179:intron | 50.0% |
| ! | TGCAATGCTGAGATTGGCCA+TGG | + | chr5.1:10874039-10874058 | MS.gene041179:CDS | 50.0% |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr5.1:10874611-10874630 | MS.gene041179:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr5.1:10874622-10874641 | MS.gene041179:intron | 50.0% |
| !! | GCATGGCATTGGAAGCATTG+TGG | - | chr5.1:10874099-10874118 | None:intergenic | 50.0% |
| ACCTCACCAGCCTATGGAGA+TGG | + | chr5.1:10876621-10876640 | MS.gene041179:CDS | 55.0% | |
| ACTCATGAAGGGATCCAGGC+CGG | - | chr5.1:10874760-10874779 | None:intergenic | 55.0% | |
| CAGATCCCGGCTAATTCAGC+TGG | + | chr5.1:10875314-10875333 | MS.gene041179:intron | 55.0% | |
| GAACAAACCGTCACCACCGT+AGG | + | chr5.1:10875917-10875936 | MS.gene041179:intron | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr5.1:10874602-10874621 | MS.gene041179:intron | 55.0% | |
| GCAGATGGCAAGCATGGCAT+TGG | - | chr5.1:10874110-10874129 | None:intergenic | 55.0% | |
| GCCTGGATCCCTTCATGAGT+TGG | + | chr5.1:10874760-10874779 | MS.gene041179:intron | 55.0% | |
| GTGATGCTTCTCCCTGTAGC+AGG | - | chr5.1:10874355-10874374 | None:intergenic | 55.0% | |
| TAAGTTGCATGGGAGGGGTC+TGG | + | chr5.1:10874070-10874089 | MS.gene041179:CDS | 55.0% | |
| TCCATCTCCATAGGCTGGTG+AGG | - | chr5.1:10876625-10876644 | None:intergenic | 55.0% | |
| TGAGGCCAGCTGAATTAGCC+GGG | - | chr5.1:10875322-10875341 | None:intergenic | 55.0% | |
| TGCTGTCGAGCTCATGCGTT+GGG | - | chr5.1:10875385-10875404 | None:intergenic | 55.0% | |
| ! | ACTGGTTCTCCTCCTCGACA+TGG | + | chr5.1:10873289-10873308 | MS.gene041179:CDS | 55.0% |
| ! | GCCCATACTTAAGTACCGCC+TGG | - | chr5.1:10876662-10876681 | None:intergenic | 55.0% |
| ! | TGGCTGTCACTTCGCATCGA+CGG | - | chr5.1:10876113-10876132 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr5.1:10874610-10874629 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | + | chr5.1:10874610-10874629 | MS.gene041179:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr5.1:10874612-10874631 | MS.gene041179:intron | 55.0% |
| CGGTGTCCTGCCCCTATACT+TGG | - | chr5.1:10876054-10876073 | None:intergenic | 60.0% | |
| GGTGGAAAGAGGTGGGGAGA+AGG | - | chr5.1:10873334-10873353 | None:intergenic | 60.0% | |
| GTGCTGTCGAGCTCATGCGT+TGG | - | chr5.1:10875386-10875405 | None:intergenic | 60.0% | |
| TCTCCCCACCTCTTTCCACC+AGG | + | chr5.1:10873334-10873353 | MS.gene041179:CDS | 60.0% | |
| ! | GGCTGTCACTTCGCATCGAC+GGG | - | chr5.1:10876112-10876131 | None:intergenic | 60.0% |
| !! | CCCCACAAAACCGGCTTGTG+AGG | - | chr5.1:10874615-10874634 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 10872473 | 10876731 | 10872473 | ID=MS.gene041179 |
| chr5.1 | mRNA | 10872473 | 10876731 | 10872473 | ID=MS.gene041179.t1;Parent=MS.gene041179 |
| chr5.1 | exon | 10872473 | 10872583 | 10872473 | ID=MS.gene041179.t1.exon1;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10872473 | 10872583 | 10872473 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10872706 | 10872796 | 10872706 | ID=MS.gene041179.t1.exon2;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10872706 | 10872796 | 10872706 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10873098 | 10873362 | 10873098 | ID=MS.gene041179.t1.exon3;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10873098 | 10873362 | 10873098 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10874026 | 10874146 | 10874026 | ID=MS.gene041179.t1.exon4;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10874026 | 10874146 | 10874026 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10874318 | 10874401 | 10874318 | ID=MS.gene041179.t1.exon5;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10874318 | 10874401 | 10874318 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10875317 | 10875436 | 10875317 | ID=MS.gene041179.t1.exon6;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10875317 | 10875436 | 10875317 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10875548 | 10875760 | 10875548 | ID=MS.gene041179.t1.exon7;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10875548 | 10875760 | 10875548 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10875872 | 10875934 | 10875872 | ID=MS.gene041179.t1.exon8;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10875872 | 10875934 | 10875872 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10876039 | 10876157 | 10876039 | ID=MS.gene041179.t1.exon9;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10876039 | 10876157 | 10876039 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10876241 | 10876299 | 10876241 | ID=MS.gene041179.t1.exon10;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10876241 | 10876299 | 10876241 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| chr5.1 | exon | 10876394 | 10876731 | 10876394 | ID=MS.gene041179.t1.exon11;Parent=MS.gene041179.t1 |
| chr5.1 | CDS | 10876394 | 10876731 | 10876394 | ID=cds.MS.gene041179.t1;Parent=MS.gene041179.t1 |
| Gene Sequence |
| Protein sequence |
