AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041187

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041187.t1 MTR_5g019030 95.979 373 15 0 1 373 262 634 0.0 750
MS.gene041187.t1 MTR_5g019040 76.371 237 10 1 373 563 185 421 4.35e-112 347
MS.gene041187.t1 MTR_8g078300 45.306 245 71 6 375 563 180 417 2.94e-50 182
MS.gene041187.t1 MTR_5g019050 41.085 129 73 2 435 563 334 459 1.04e-23 105
MS.gene041187.t1 MTR_5g042440 47.541 122 57 2 442 562 333 448 1.10e-23 105
MS.gene041187.t1 MTR_1g021845 42.149 121 62 3 445 563 332 446 3.08e-21 98.2
MS.gene041187.t1 MTR_8g070050 30.986 142 98 0 229 370 81 222 1.75e-20 90.9
MS.gene041187.t1 MTR_5g085790 42.149 121 67 2 444 562 342 461 4.41e-20 94.7
MS.gene041187.t1 MTR_3g080170 41.322 121 64 4 444 562 344 459 5.36e-20 94.4
MS.gene041187.t1 MTR_3g045420 24.603 252 186 1 104 355 357 604 2.47e-18 89.4
MS.gene041187.t1 MTR_3g037490 32.192 146 95 2 202 347 101 242 7.20e-16 81.3
MS.gene041187.t1 MTR_3g037490 31.343 134 92 0 231 364 196 329 2.48e-15 79.3
MS.gene041187.t1 MTR_2g102210 24.315 292 189 2 104 363 75 366 9.09e-16 80.9
MS.gene041187.t1 MTR_8g070060 26.147 218 145 3 149 366 446 647 2.43e-15 79.7
MS.gene041187.t1 MTR_0014s0250 29.412 187 128 2 175 361 324 506 8.27e-15 77.8
MS.gene041187.t1 MTR_6g045263 24.537 216 156 2 143 355 273 484 8.43e-15 77.4
MS.gene041187.t1 MTR_6g045263 24.537 216 156 2 143 355 297 508 9.82e-15 77.4
MS.gene041187.t1 MTR_3g100600 24.272 309 187 7 90 355 62 366 1.45e-14 77.0
MS.gene041187.t1 MTR_3g105900 27.273 220 152 2 144 361 400 613 2.10e-14 77.0
MS.gene041187.t1 MTR_3g105900 25.806 217 155 2 149 364 230 441 3.29e-14 76.6
MS.gene041187.t1 MTR_3g105900 23.881 268 182 5 124 386 101 351 8.65e-14 75.1
MS.gene041187.t1 MTR_3g105900 26.794 209 138 4 150 355 832 1028 1.96e-12 70.9
MS.gene041187.t1 MTR_5g029690 31.624 117 80 0 231 347 254 370 2.19e-14 76.6
MS.gene041187.t1 MTR_5g029690 23.963 217 157 5 145 357 133 345 9.78e-11 65.1
MS.gene041187.t1 MTR_7g118240 26.695 236 157 4 124 352 45 271 2.50e-14 75.9
MS.gene041187.t1 MTR_7g044790 22.000 250 154 6 104 352 71 280 2.67e-14 76.6
MS.gene041187.t1 MTR_5g033490 36.154 130 71 4 442 563 293 418 3.29e-14 75.9
MS.gene041187.t1 MTR_8g107230 21.495 214 165 1 112 325 58 268 3.35e-14 75.9
MS.gene041187.t1 MTR_1g112240 29.630 135 95 0 231 365 245 379 3.41e-14 75.9
MS.gene041187.t1 MTR_1g112240 24.457 184 135 2 164 347 217 396 2.26e-13 73.2
MS.gene041187.t1 MTR_6g069840 28.922 204 141 2 149 352 281 480 3.96e-14 75.5
MS.gene041187.t1 MTR_6g069840 27.273 143 104 0 228 370 216 358 3.19e-11 66.2
MS.gene041187.t1 MTR_6g069840 31.148 122 84 0 231 352 254 375 5.12e-11 65.5
MS.gene041187.t1 MTR_6g077800 27.344 128 93 0 228 355 227 354 4.30e-14 75.1
MS.gene041187.t1 MTR_6g077800 24.766 214 153 3 149 360 257 464 3.92e-12 68.9
MS.gene041187.t1 MTR_3g080050 34.437 151 82 5 422 563 285 427 4.80e-14 75.5
MS.gene041187.t1 MTR_0014s0180 27.982 218 147 4 141 355 293 503 4.90e-14 75.5
MS.gene041187.t1 MTR_1g068960 28.994 169 111 3 195 358 453 617 5.48e-14 75.5
MS.gene041187.t1 MTR_1g068960 31.148 122 84 0 231 352 310 431 6.07e-13 72.0
MS.gene041187.t1 MTR_3g114700 22.222 216 163 1 140 355 129 339 5.62e-14 75.1
MS.gene041187.t1 MTR_7g029650 33.594 128 73 5 446 562 339 465 5.88e-14 75.5
MS.gene041187.t1 MTR_1g055295 23.013 239 179 3 129 366 176 410 6.45e-14 75.5
MS.gene041187.t1 MTR_1g055295 30.000 130 90 1 224 352 864 993 4.74e-13 72.8
MS.gene041187.t1 MTR_6g069840 29.000 200 138 2 153 352 301 496 6.92e-14 74.7
MS.gene041187.t1 MTR_6g069840 27.273 143 104 0 228 370 232 374 2.96e-11 66.6
MS.gene041187.t1 MTR_6g069840 31.148 122 84 0 231 352 270 391 5.60e-11 65.5
MS.gene041187.t1 MTR_6g069170 25.359 209 139 4 153 346 119 325 7.06e-14 73.6
MS.gene041187.t1 MTR_5g095130 21.970 264 198 4 97 357 74 332 7.99e-14 75.1
MS.gene041187.t1 MTR_5g095130 21.186 236 155 2 153 357 411 646 1.31e-11 68.2
MS.gene041187.t1 MTR_6g078190 22.083 240 156 2 153 361 176 415 1.04e-13 74.3
MS.gene041187.t1 MTR_6g072030 23.873 377 216 10 8 347 247 589 1.12e-13 74.3
MS.gene041187.t1 MTR_6g072030 26.214 206 144 3 149 352 290 489 9.46e-12 68.2
MS.gene041187.t1 MTR_6g072030 24.286 210 147 4 147 352 253 454 6.45e-11 65.5
MS.gene041187.t1 MTR_8g107050 28.169 213 118 5 167 348 317 525 1.19e-13 74.3
MS.gene041187.t1 MTR_8g107050 32.203 118 80 0 231 348 268 385 6.05e-11 65.9
MS.gene041187.t1 MTR_8g107050 28.169 213 118 5 167 348 317 525 1.23e-13 74.3
MS.gene041187.t1 MTR_8g107050 32.203 118 80 0 231 348 268 385 6.48e-11 65.5
MS.gene041187.t1 MTR_2g016740 22.951 244 181 4 110 352 37 274 1.35e-13 73.6
MS.gene041187.t1 MTR_4g021220 21.495 214 163 2 140 352 56 265 1.50e-13 73.6
MS.gene041187.t1 MTR_6g081920 31.148 122 84 0 231 352 279 400 1.56e-13 73.2
MS.gene041187.t1 MTR_0573s0020 25.641 234 168 4 137 370 10 237 1.77e-13 71.2
MS.gene041187.t1 MTR_6g079920 27.711 166 117 1 199 361 368 533 2.28e-13 73.2
MS.gene041187.t1 MTR_6g079920 27.407 135 98 0 231 365 263 397 1.79e-12 70.5
MS.gene041187.t1 MTR_6g079920 27.869 122 88 0 231 352 298 419 9.15e-11 65.1
MS.gene041187.t1 MTR_6g478130 25.641 234 168 4 137 370 145 372 2.36e-13 72.4
MS.gene041187.t1 MTR_1g048080 28.492 179 122 4 176 353 570 743 2.84e-13 73.6
MS.gene041187.t1 MTR_7g012890 29.944 177 119 3 194 370 344 515 3.07e-13 72.8
MS.gene041187.t1 MTR_4g104790 23.967 242 175 5 104 341 212 448 3.79e-13 72.8
MS.gene041187.t1 MTR_6g079590 32.787 122 82 0 231 352 380 501 4.54e-13 72.4
MS.gene041187.t1 MTR_6g079180 22.490 249 161 3 153 370 111 358 4.54e-13 71.6
MS.gene041187.t1 MTR_6g079180 26.866 134 96 1 231 362 80 213 1.20e-11 67.0
MS.gene041187.t1 MTR_3g023180 23.200 250 188 2 103 352 104 349 4.55e-13 72.4
MS.gene041187.t1 MTR_0019s0210 30.256 195 128 4 176 370 333 519 4.79e-13 72.0
MS.gene041187.t1 MTR_6g079210 22.490 249 161 3 153 370 111 358 5.18e-13 71.2
MS.gene041187.t1 MTR_6g079210 26.866 134 96 1 231 362 80 213 1.50e-11 66.6
MS.gene041187.t1 MTR_5g090170 22.222 270 191 3 88 357 44 294 5.22e-13 72.4
MS.gene041187.t1 MTR_0014s0260 28.814 118 84 0 231 348 207 324 5.25e-13 71.6
MS.gene041187.t1 MTR_1g050495 28.676 136 97 0 231 366 236 371 5.56e-13 72.0
MS.gene041187.t1 MTR_6g478220 28.947 152 96 3 203 346 24 171 6.53e-13 68.2
MS.gene041187.t1 MTR_2g018550 26.449 276 178 6 97 361 140 401 6.90e-13 72.0
MS.gene041187.t1 MTR_5g090170 22.222 270 191 3 88 357 44 294 7.10e-13 72.0
MS.gene041187.t1 MTR_6g478210 29.508 122 86 0 231 352 80 201 7.79e-13 70.5
MS.gene041187.t1 MTR_6g478210 28.947 152 96 3 203 346 196 343 8.54e-12 67.4
MS.gene041187.t1 MTR_8g105170 22.897 214 155 2 147 357 480 686 8.33e-13 72.0
MS.gene041187.t1 MTR_8g105170 23.445 209 156 1 149 357 307 511 1.25e-11 68.2
MS.gene041187.t1 MTR_5g008300 22.727 198 149 1 149 346 401 594 8.34e-13 72.0
MS.gene041187.t1 MTR_5g008300 29.600 125 88 0 231 355 374 498 1.40e-11 68.2
MS.gene041187.t1 MTR_5g008300 22.727 198 149 1 149 346 854 1047 6.24e-11 66.2
MS.gene041187.t1 MTR_4g133920 34.532 139 79 5 435 563 12 148 9.12e-13 70.1
MS.gene041187.t1 MTR_6g079890 27.407 135 98 0 231 365 216 350 9.85e-13 70.9
MS.gene041187.t1 MTR_6g079890 28.947 152 96 3 203 346 332 479 1.89e-11 67.0
MS.gene041187.t1 MTR_5g031740 23.109 238 152 4 149 355 325 562 9.93e-13 71.6
MS.gene041187.t1 MTR_5g031740 21.757 239 160 2 134 352 83 314 2.53e-12 70.5
MS.gene041187.t1 MTR_5g031740 29.008 131 93 0 231 361 368 498 2.99e-11 67.0
MS.gene041187.t1 MTR_6g069200 29.008 131 93 0 231 361 33 163 1.02e-12 67.8
MS.gene041187.t1 MTR_6g078210 24.519 208 147 2 153 357 281 481 1.14e-12 70.9
MS.gene041187.t1 MTR_6g079830 27.407 135 98 0 231 365 263 397 1.37e-12 70.9
MS.gene041187.t1 MTR_1g031720 28.141 199 139 1 149 347 307 501 1.40e-12 71.2
MS.gene041187.t1 MTR_7g060720 24.468 282 166 7 119 357 43 320 1.51e-12 70.5
MS.gene041187.t1 MTR_5g077930 23.887 247 177 3 123 366 196 434 1.59e-12 70.9
MS.gene041187.t1 MTR_4g040410 26.531 147 104 1 231 373 302 448 2.51e-12 69.7
MS.gene041187.t1 MTR_4g094245 25.620 242 169 6 112 347 60 296 2.73e-12 69.3
MS.gene041187.t1 MTR_6g069300 29.771 131 92 0 231 361 382 512 3.09e-12 69.7
MS.gene041187.t1 MTR_6g445300 23.729 236 144 4 153 352 208 443 3.34e-12 69.3
MS.gene041187.t1 MTR_6g079240 21.951 246 160 3 153 367 111 355 3.79e-12 68.9
MS.gene041187.t1 MTR_6g079240 27.826 115 83 0 231 345 80 194 3.58e-11 65.9
MS.gene041187.t1 MTR_4g091600 30.075 133 90 1 231 363 331 460 3.95e-12 69.7
MS.gene041187.t1 MTR_6g079310 21.951 246 160 3 153 367 223 467 4.34e-12 68.9
MS.gene041187.t1 MTR_6g079310 27.826 115 83 0 231 345 192 306 3.78e-11 65.9
MS.gene041187.t1 MTR_2g437460 22.000 300 204 5 95 372 62 353 4.89e-12 69.3
MS.gene041187.t1 MTR_8g054410 29.114 158 108 2 195 352 358 511 5.55e-12 68.9
MS.gene041187.t1 MTR_1g045850 22.541 244 158 2 153 365 219 462 5.59e-12 68.6
MS.gene041187.t1 MTR_3g034990 29.762 168 113 2 203 370 362 524 5.59e-12 68.9
MS.gene041187.t1 MTR_3g034990 29.508 122 86 0 231 352 281 402 8.42e-11 65.1
MS.gene041187.t1 MTR_2g035630 21.429 266 143 4 153 352 267 532 6.38e-12 68.6
MS.gene041187.t1 MTR_4g068360 25.121 207 151 2 149 355 352 554 7.54e-12 68.6
MS.gene041187.t1 MTR_2g039290 30.814 172 102 5 403 562 783 949 7.68e-12 68.9
MS.gene041187.t1 MTR_1g033960 23.504 234 157 3 122 355 180 391 7.68e-12 68.6
MS.gene041187.t1 MTR_3g448620 26.961 204 139 5 168 370 315 509 7.94e-12 68.2
MS.gene041187.t1 MTR_4g081655 35.385 130 66 6 445 562 527 650 7.97e-12 68.6
MS.gene041187.t1 MTR_6g077540 23.474 213 118 3 183 357 358 563 8.56e-12 68.2
MS.gene041187.t1 MTR_6g077540 26.667 135 99 0 231 365 262 396 2.63e-11 66.6
MS.gene041187.t1 MTR_4g081655 35.385 130 66 6 445 562 527 650 8.76e-12 68.6
MS.gene041187.t1 MTR_4g081655 35.385 130 66 6 445 562 492 615 9.19e-12 68.6
MS.gene041187.t1 MTR_4g108650 23.000 200 150 2 153 352 110 305 9.34e-12 68.6
MS.gene041187.t1 MTR_2g039290 30.814 172 102 5 403 562 1017 1183 9.53e-12 68.6
MS.gene041187.t1 MTR_0237s0070 28.395 162 106 2 203 361 487 641 9.67e-12 68.2
MS.gene041187.t1 MTR_8g071300 20.705 227 158 3 135 352 129 342 1.05e-11 68.2
MS.gene041187.t1 MTR_2g039290 30.814 172 102 5 403 562 1005 1171 1.14e-11 68.6
MS.gene041187.t1 MTR_7g011500 22.545 275 180 8 106 355 51 317 1.26e-11 67.8
MS.gene041187.t1 MTR_6g061120 24.878 205 150 2 153 357 133 333 1.40e-11 67.0
MS.gene041187.t1 MTR_3g088505 23.361 244 180 5 110 352 52 289 1.41e-11 67.4
MS.gene041187.t1 MTR_4g107180 28.244 131 94 0 231 361 271 401 1.51e-11 67.0
MS.gene041187.t1 MTR_4g108060 22.936 218 158 2 147 361 167 377 1.63e-11 67.0
MS.gene041187.t1 MTR_3g091500 21.456 261 179 5 120 355 63 322 1.64e-11 67.8
MS.gene041187.t1 MTR_2g036560 25.500 200 145 2 156 355 380 575 1.74e-11 67.8
MS.gene041187.t1 MTR_3g061020 25.668 187 135 1 175 361 179 361 1.83e-11 66.6
MS.gene041187.t1 MTR_6g079380 27.273 143 103 1 228 370 372 513 1.86e-11 67.0
MS.gene041187.t1 MTR_3g008430 28.346 127 90 1 228 353 315 441 1.87e-11 67.0
MS.gene041187.t1 MTR_4g014900 34.959 123 62 5 453 563 158 274 1.92e-11 66.2
MS.gene041187.t1 MTR_8g071970 23.333 210 155 2 147 355 554 758 1.94e-11 67.4
MS.gene041187.t1 MTR_4g014900 34.959 123 62 5 453 563 158 274 1.99e-11 66.6
MS.gene041187.t1 MTR_6g079960 28.319 113 80 1 220 332 196 307 2.02e-11 67.0
MS.gene041187.t1 MTR_6g079960 32.323 99 67 0 254 352 299 397 8.06e-11 65.1
MS.gene041187.t1 MTR_0308s0020 28.689 122 87 0 231 352 267 388 2.25e-11 67.0
MS.gene041187.t1 MTR_6g079250 25.641 195 140 3 176 370 169 358 2.31e-11 66.2
MS.gene041187.t1 MTR_6g079270 22.308 260 187 4 97 352 33 281 2.34e-11 65.9
MS.gene041187.t1 MTR_4g014900 34.959 123 62 5 453 563 158 274 2.37e-11 66.2
MS.gene041187.t1 MTR_4g115630 34.302 172 82 6 404 562 173 326 2.38e-11 66.6
MS.gene041187.t1 MTR_1g013040 34.959 123 62 5 453 563 153 269 2.45e-11 66.2
MS.gene041187.t1 MTR_1g013040 34.959 123 62 5 453 563 153 269 2.67e-11 66.2
MS.gene041187.t1 MTR_6g005000 23.944 213 151 5 142 348 247 454 2.86e-11 66.6
MS.gene041187.t1 MTR_4g108060 22.936 218 158 2 147 361 301 511 3.03e-11 66.6
MS.gene041187.t1 MTR_7g027940 26.027 219 151 5 120 332 118 331 3.06e-11 66.6
MS.gene041187.t1 MTR_0110s0060 26.257 179 128 1 183 361 329 503 3.14e-11 66.2
MS.gene041187.t1 MTR_0014s0210 23.207 237 154 2 153 361 221 457 4.01e-11 65.9
MS.gene041187.t1 MTR_6g069180 28.931 159 109 2 203 361 355 509 4.30e-11 65.9
MS.gene041187.t1 MTR_6g069180 29.508 122 86 0 231 352 414 535 9.33e-11 65.1
MS.gene041187.t1 MTR_3g053350 23.556 225 161 5 137 356 187 405 4.50e-11 66.2
MS.gene041187.t1 MTR_7g405940 23.200 250 170 4 102 347 262 493 4.62e-11 66.2
MS.gene041187.t1 MTR_6g022260 24.091 220 162 2 133 352 284 498 4.77e-11 65.9
MS.gene041187.t1 MTR_2g069680 25.352 213 146 5 147 355 341 544 5.17e-11 65.9
MS.gene041187.t1 MTR_2g069680 25.352 213 146 5 147 355 216 419 5.33e-11 65.5
MS.gene041187.t1 MTR_3g088950 24.155 207 153 2 149 355 177 379 5.35e-11 65.9
MS.gene041187.t1 MTR_3g088950 24.000 200 145 3 149 348 110 302 6.89e-11 65.5
MS.gene041187.t1 MTR_6g471100 25.628 199 98 4 231 388 456 645 5.56e-11 65.9
MS.gene041187.t1 MTR_8g057660 30.323 155 87 5 417 560 25 169 5.59e-11 64.3
MS.gene041187.t1 MTR_6g079290 25.000 152 87 1 231 355 13 164 5.76e-11 63.9
MS.gene041187.t1 MTR_5g007250 20.870 230 164 2 147 361 523 749 6.05e-11 65.9
MS.gene041187.t1 MTR_6g068790 28.571 119 85 0 228 346 420 538 6.17e-11 65.5
MS.gene041187.t1 MTR_4g104830 22.807 228 165 3 103 325 213 434 6.26e-11 65.5
MS.gene041187.t1 MTR_6g078160 22.439 205 155 3 153 357 265 465 6.53e-11 65.5
MS.gene041187.t1 MTR_3g104660 31.818 132 68 5 442 562 399 519 6.66e-11 65.5
MS.gene041187.t1 MTR_8g039270 22.458 236 162 4 134 352 58 289 7.15e-11 65.5
MS.gene041187.t1 MTR_6g079440 29.752 121 85 0 228 348 264 384 7.89e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041187.t1 AT5G66631 57.743 381 145 4 2 373 263 636 6.07e-155 459
MS.gene041187.t1 AT5G66631 23.982 221 157 4 148 367 99 309 1.02e-11 68.2
MS.gene041187.t1 AT2G33580 36.782 174 89 5 393 562 314 470 6.43e-21 97.4
MS.gene041187.t1 AT1G18900 24.231 260 193 1 104 363 314 569 2.42e-20 95.9
MS.gene041187.t1 AT1G18900 24.231 260 193 1 104 363 314 569 2.42e-20 95.9
MS.gene041187.t1 AT1G18900 24.231 260 193 1 104 363 314 569 2.42e-20 95.9
MS.gene041187.t1 AT1G18900 24.231 260 193 1 104 363 314 569 2.45e-20 95.9
MS.gene041187.t1 AT1G74750 23.488 281 209 2 87 365 290 566 4.33e-18 88.6
MS.gene041187.t1 AT1G74750 23.488 281 209 2 87 365 290 566 4.33e-18 88.6
MS.gene041187.t1 AT1G74750 23.488 281 209 2 87 365 290 566 4.33e-18 88.6
MS.gene041187.t1 AT1G74750 23.488 281 209 2 87 365 290 566 4.33e-18 88.6
MS.gene041187.t1 AT3G18110 26.577 222 160 1 149 370 362 580 6.22e-18 88.6
MS.gene041187.t1 AT3G18110 27.568 185 129 3 172 355 280 460 3.15e-13 73.6
MS.gene041187.t1 AT3G22670 23.158 285 185 5 107 357 118 402 5.88e-17 84.7
MS.gene041187.t1 AT5G18390 24.370 238 176 2 111 347 67 301 9.67e-17 83.6
MS.gene041187.t1 AT5G06400 27.200 250 167 6 112 355 146 386 1.57e-16 84.0
MS.gene041187.t1 AT5G65560 25.000 276 155 7 89 352 72 307 2.34e-16 83.2
MS.gene041187.t1 AT5G65560 25.000 276 155 7 89 352 72 307 2.34e-16 83.2
MS.gene041187.t1 AT5G65560 25.000 276 155 7 89 352 72 307 2.34e-16 83.2
MS.gene041187.t1 AT2G31400 24.490 196 144 1 152 347 372 563 5.85e-16 82.0
MS.gene041187.t1 AT2G31400 24.490 196 144 1 152 347 372 563 7.14e-16 81.6
MS.gene041187.t1 AT5G39710 27.717 184 129 2 149 332 270 449 1.86e-15 80.1
MS.gene041187.t1 AT5G39710 31.148 122 84 0 231 352 453 574 6.65e-11 65.9
MS.gene041187.t1 AT1G62670 26.462 325 208 9 149 466 216 516 3.40e-15 79.3
MS.gene041187.t1 AT1G62670 25.954 131 97 0 231 361 434 564 3.14e-12 69.7
MS.gene041187.t1 AT1G62670 22.439 205 155 1 149 353 111 311 9.53e-11 65.1
MS.gene041187.t1 AT1G62670 26.462 325 208 9 149 466 216 516 3.40e-15 79.3
MS.gene041187.t1 AT1G62670 25.954 131 97 0 231 361 434 564 3.14e-12 69.7
MS.gene041187.t1 AT1G62670 22.439 205 155 1 149 353 111 311 9.53e-11 65.1
MS.gene041187.t1 AT1G62930 25.610 328 207 9 149 466 215 515 3.83e-15 79.0
MS.gene041187.t1 AT1G62930 27.481 131 95 0 231 361 433 563 7.85e-13 71.6
MS.gene041187.t1 AT3G16010 26.984 252 176 4 104 352 76 322 4.49e-15 79.0
MS.gene041187.t1 AT3G16010 25.157 159 115 1 195 353 450 604 3.81e-11 66.2
MS.gene041187.t1 AT4G01400 25.751 233 162 2 124 352 54 279 4.67e-15 78.2
MS.gene041187.t1 AT3G09060 22.177 248 190 1 120 367 9 253 9.08e-15 78.2
MS.gene041187.t1 AT3G09060 22.177 248 190 1 120 367 9 253 9.08e-15 78.2
MS.gene041187.t1 AT1G12620 27.363 201 138 4 147 345 205 399 9.48e-15 77.8
MS.gene041187.t1 AT3G62470 23.451 226 164 5 123 346 163 381 1.32e-14 77.4
MS.gene041187.t1 AT4G31850 26.053 380 236 12 3 358 240 598 1.46e-14 77.8
MS.gene041187.t1 AT4G31850 24.194 248 157 2 149 365 253 500 1.31e-12 71.2
MS.gene041187.t1 AT5G14820 23.451 226 164 5 123 346 162 380 1.67e-14 77.0
MS.gene041187.t1 AT1G12775 27.451 204 140 4 147 348 221 418 1.68e-14 77.0
MS.gene041187.t1 AT2G32630 24.034 233 166 3 132 361 203 427 1.88e-14 77.0
MS.gene041187.t1 AT3G22470 29.000 200 138 2 149 348 205 400 2.21e-14 76.6
MS.gene041187.t1 AT1G62590 28.218 202 141 2 147 348 218 415 2.78e-14 76.3
MS.gene041187.t1 AT1G62590 28.218 202 141 2 147 348 218 415 2.78e-14 76.3
MS.gene041187.t1 AT3G22470 29.000 200 138 2 149 348 205 400 2.94e-14 76.3
MS.gene041187.t1 AT3G22470 29.508 122 86 0 231 352 318 439 8.09e-13 71.6
MS.gene041187.t1 AT3G62540 23.451 226 164 5 123 346 163 381 3.03e-14 76.3
MS.gene041187.t1 AT2G01390 21.226 212 163 1 119 330 87 294 3.21e-14 75.9
MS.gene041187.t1 AT3G25210 23.171 246 159 3 128 355 82 315 3.93e-14 74.7
MS.gene041187.t1 AT1G62910 26.126 333 203 10 147 466 216 518 4.56e-14 75.5
MS.gene041187.t1 AT1G62910 22.927 205 154 2 149 353 113 313 3.17e-11 66.6
MS.gene041187.t1 AT4G20740 22.420 281 186 4 103 352 108 387 4.86e-14 75.9
MS.gene041187.t1 AT5G38730 23.438 256 168 7 120 353 44 293 5.92e-14 75.1
MS.gene041187.t1 AT5G38730 25.943 212 153 2 144 355 332 539 5.54e-11 65.9
MS.gene041187.t1 AT3G21630 33.136 169 86 7 410 563 271 427 7.03e-14 75.1
MS.gene041187.t1 AT1G74850 25.926 216 149 3 153 364 210 418 7.42e-14 75.1
MS.gene041187.t1 AT5G61990 33.636 110 73 0 231 340 630 739 9.03e-14 75.1
MS.gene041187.t1 AT5G61990 23.989 371 233 14 6 355 631 973 5.28e-11 66.2
MS.gene041187.t1 AT1G55630 22.222 216 161 2 143 355 243 454 1.09e-13 73.9
MS.gene041187.t1 AT1G63130 25.228 329 207 10 149 466 216 516 1.29e-13 74.3
MS.gene041187.t1 AT1G63130 24.277 173 123 2 191 361 398 564 2.78e-12 70.1
MS.gene041187.t1 AT1G63130 21.635 208 153 2 149 353 111 311 5.01e-11 65.9
MS.gene041187.t1 AT1G63130 25.228 329 207 10 149 466 216 516 1.29e-13 74.3
MS.gene041187.t1 AT1G63130 24.277 173 123 2 191 361 398 564 2.78e-12 70.1
MS.gene041187.t1 AT1G63130 21.635 208 153 2 149 353 111 311 5.01e-11 65.9
MS.gene041187.t1 AT5G02860 21.887 265 163 5 136 364 191 447 1.32e-13 74.3
MS.gene041187.t1 AT5G02860 20.661 242 185 3 127 365 249 486 5.58e-12 69.3
MS.gene041187.t1 AT5G02860 21.887 265 163 5 136 364 191 447 1.32e-13 74.3
MS.gene041187.t1 AT5G02860 20.661 242 185 3 127 365 249 486 5.58e-12 69.3
MS.gene041187.t1 AT5G02860 21.887 265 163 5 136 364 191 447 1.32e-13 74.3
MS.gene041187.t1 AT5G02860 20.661 242 185 3 127 365 249 486 5.58e-12 69.3
MS.gene041187.t1 AT5G02860 21.887 265 163 5 136 364 191 447 1.32e-13 74.3
MS.gene041187.t1 AT5G02860 20.661 242 185 3 127 365 249 486 5.58e-12 69.3
MS.gene041187.t1 AT5G02860 21.887 265 163 5 136 364 191 447 1.32e-13 74.3
MS.gene041187.t1 AT5G02860 20.661 242 185 3 127 365 249 486 5.58e-12 69.3
MS.gene041187.t1 AT4G20140 40.157 127 62 4 451 563 944 1070 1.63e-13 74.3
MS.gene041187.t1 AT2G17140 24.701 251 175 5 123 365 5 249 2.11e-13 73.9
MS.gene041187.t1 AT2G17140 22.380 353 230 9 8 352 134 450 2.93e-12 70.1
MS.gene041187.t1 AT2G17140 24.701 251 175 5 123 365 5 249 2.11e-13 73.9
MS.gene041187.t1 AT2G17140 22.380 353 230 9 8 352 134 450 2.93e-12 70.1
MS.gene041187.t1 AT3G16890 23.950 238 175 4 118 354 296 528 2.19e-13 73.2
MS.gene041187.t1 AT3G16890 23.041 217 163 2 149 365 291 503 1.11e-11 67.8
MS.gene041187.t1 AT3G16890 23.849 239 176 4 118 355 425 658 2.47e-13 73.6
MS.gene041187.t1 AT3G16890 23.041 217 163 2 149 365 420 632 7.02e-12 68.9
MS.gene041187.t1 AT2G23770 37.288 118 66 3 445 562 343 452 3.30e-13 72.8
MS.gene041187.t1 AT5G16420 23.381 278 164 8 119 352 43 315 3.75e-13 72.4
MS.gene041187.t1 AT5G16420 23.381 278 164 8 119 352 43 315 3.75e-13 72.4
MS.gene041187.t1 AT5G16420 23.381 278 164 8 119 352 43 315 3.75e-13 72.4
MS.gene041187.t1 AT5G16420 23.381 278 164 8 119 352 43 315 3.75e-13 72.4
MS.gene041187.t1 AT1G77340 23.111 225 153 5 134 355 40 247 3.92e-13 72.0
MS.gene041187.t1 AT1G63400 23.939 330 214 9 147 466 218 520 4.75e-13 72.4
MS.gene041187.t1 AT1G63400 24.713 174 121 4 191 361 402 568 9.88e-12 68.2
MS.gene041187.t1 AT1G30290 26.106 226 154 5 160 382 353 568 4.99e-13 72.4
MS.gene041187.t1 AT3G53700 23.611 216 161 1 155 370 436 647 5.19e-13 72.4
MS.gene041187.t1 AT3G53700 23.661 224 167 2 137 360 278 497 3.98e-11 66.6
MS.gene041187.t1 AT1G63330 29.756 205 134 4 147 348 143 340 5.53e-13 72.0
MS.gene041187.t1 AT1G63330 29.756 205 134 4 147 348 143 340 5.53e-13 72.0
MS.gene041187.t1 AT1G63330 29.756 205 134 4 147 348 143 340 5.53e-13 72.0
MS.gene041187.t1 AT1G30290 26.106 226 154 5 160 382 353 568 5.55e-13 72.4
MS.gene041187.t1 AT2G06000 25.333 225 159 5 133 355 82 299 5.78e-13 72.0
MS.gene041187.t1 AT2G06000 27.869 122 88 0 231 352 280 401 1.43e-11 67.4
MS.gene041187.t1 AT2G06000 25.333 225 159 5 133 355 82 299 5.78e-13 72.0
MS.gene041187.t1 AT2G06000 27.869 122 88 0 231 352 280 401 1.43e-11 67.4
MS.gene041187.t1 AT1G12700 28.462 130 93 0 228 357 333 462 6.53e-13 72.0
MS.gene041187.t1 AT1G12700 24.074 216 154 2 149 361 328 536 4.07e-12 69.3
MS.gene041187.t1 AT1G12700 28.462 130 93 0 228 357 349 478 6.62e-13 72.0
MS.gene041187.t1 AT1G12700 24.074 216 154 2 149 361 344 552 4.08e-12 69.3
MS.gene041187.t1 AT1G12700 28.462 130 93 0 228 357 349 478 6.62e-13 72.0
MS.gene041187.t1 AT1G12700 24.074 216 154 2 149 361 344 552 4.08e-12 69.3
MS.gene041187.t1 AT5G01110 22.182 275 200 4 135 409 217 477 9.18e-13 71.6
MS.gene041187.t1 AT1G05670 24.155 207 153 2 149 355 486 688 9.76e-13 71.6
MS.gene041187.t1 AT1G05670 23.794 311 216 7 149 454 276 570 2.26e-12 70.5
MS.gene041187.t1 AT1G05670 25.837 209 145 2 147 352 449 650 6.68e-11 65.9
MS.gene041187.t1 AT1G05670 24.155 207 153 2 149 355 486 688 9.76e-13 71.6
MS.gene041187.t1 AT1G05670 23.794 311 216 7 149 454 276 570 2.26e-12 70.5
MS.gene041187.t1 AT1G05670 25.837 209 145 2 147 352 449 650 6.68e-11 65.9
MS.gene041187.t1 AT1G05670 24.155 207 153 2 149 355 486 688 9.76e-13 71.6
MS.gene041187.t1 AT1G05670 23.794 311 216 7 149 454 276 570 2.26e-12 70.5
MS.gene041187.t1 AT1G05670 25.837 209 145 2 147 352 449 650 6.68e-11 65.9
MS.gene041187.t1 AT1G79490 30.519 154 99 2 190 341 314 461 1.13e-12 71.6
MS.gene041187.t1 AT5G01110 22.182 275 200 4 135 409 245 505 1.26e-12 71.2
MS.gene041187.t1 AT1G09820 24.138 261 158 6 123 347 194 450 1.60e-12 70.9
MS.gene041187.t1 AT1G09820 28.030 132 94 1 230 361 403 533 9.68e-12 68.2
MS.gene041187.t1 AT3G06920 20.069 289 192 3 104 357 48 332 1.74e-12 70.9
MS.gene041187.t1 AT3G06920 21.053 285 194 4 104 357 62 346 1.82e-12 70.9
MS.gene041187.t1 AT3G06920 21.053 285 194 4 104 357 62 346 1.82e-12 70.9
MS.gene041187.t1 AT5G61400 31.250 144 92 1 205 348 393 529 1.91e-12 70.5
MS.gene041187.t1 AT5G57250 24.893 233 167 4 125 357 182 406 2.04e-12 70.9
MS.gene041187.t1 AT1G62914 24.625 333 208 10 147 466 211 513 2.27e-12 70.1
MS.gene041187.t1 AT5G65820 24.336 226 157 5 135 355 128 344 2.39e-12 70.1
MS.gene041187.t1 AT1G09900 25.946 185 130 3 164 348 147 324 2.66e-12 70.1
MS.gene041187.t1 AT1G71060 22.269 238 178 3 137 374 111 341 2.76e-12 69.7
MS.gene041187.t1 AT1G02060 22.747 233 142 5 124 355 71 266 4.86e-12 69.3
MS.gene041187.t1 AT1G09680 21.212 231 177 3 136 366 223 448 6.90e-12 68.6
MS.gene041187.t1 AT3G60050 23.611 216 161 1 132 347 127 338 9.02e-12 68.2
MS.gene041187.t1 AT3G60050 23.744 219 154 3 143 355 240 451 1.46e-11 67.4
MS.gene041187.t1 AT3G60050 23.611 216 161 1 132 347 127 338 9.02e-12 68.2
MS.gene041187.t1 AT3G60050 23.744 219 154 3 143 355 240 451 1.46e-11 67.4
MS.gene041187.t1 AT5G55840 24.336 226 157 4 137 348 93 318 1.40e-11 68.2
MS.gene041187.t1 AT5G55840 30.657 137 94 1 231 367 446 581 1.72e-11 67.8
MS.gene041187.t1 AT5G55840 24.336 226 157 4 137 348 93 318 1.40e-11 68.2
MS.gene041187.t1 AT5G55840 30.657 137 94 1 231 367 446 581 1.72e-11 67.8
MS.gene041187.t1 AT5G64320 30.709 127 84 1 229 355 253 375 1.45e-11 67.8
MS.gene041187.t1 AT5G55840 24.336 226 157 4 137 348 53 278 1.51e-11 68.2
MS.gene041187.t1 AT5G55840 30.657 137 94 1 231 367 406 541 1.70e-11 67.8
MS.gene041187.t1 AT4G26800 30.508 118 82 0 231 348 86 203 1.89e-11 66.2
MS.gene041187.t1 AT1G63080 24.085 328 212 9 149 466 200 500 2.16e-11 67.0
MS.gene041187.t1 AT1G63080 24.085 328 212 9 149 466 200 500 2.16e-11 67.0
MS.gene041187.t1 AT1G63080 24.085 328 212 9 149 466 200 500 2.16e-11 67.0
MS.gene041187.t1 AT5G16640 22.581 217 159 3 153 367 290 499 2.27e-11 66.6
MS.gene041187.t1 AT5G59900 30.328 122 85 0 231 352 475 596 2.65e-11 67.0
MS.gene041187.t1 AT4G26800 30.508 118 82 0 231 348 156 273 2.96e-11 66.2
MS.gene041187.t1 AT1G13040 25.888 197 132 5 163 353 296 484 3.09e-11 66.2
MS.gene041187.t1 AT1G13040 25.888 197 132 5 163 353 296 484 3.09e-11 66.2
MS.gene041187.t1 AT3G54980 21.569 204 156 2 149 352 614 813 3.14e-11 67.0
MS.gene041187.t1 AT3G54980 21.569 204 156 2 149 352 614 813 3.14e-11 67.0
MS.gene041187.t1 AT4G26800 30.508 118 82 0 231 348 231 348 3.26e-11 66.2
MS.gene041187.t1 AT1G64580 29.134 127 90 0 231 357 292 418 3.88e-11 66.2
MS.gene041187.t1 AT2G07020 34.815 135 67 7 446 569 407 531 4.06e-11 66.2
MS.gene041187.t1 AT5G18475 23.755 261 164 6 127 352 62 322 4.44e-11 65.9
MS.gene041187.t1 AT4G26680 23.109 238 175 3 128 365 181 410 5.07e-11 65.9
MS.gene041187.t1 AT4G26680 23.109 238 175 3 128 365 181 410 5.07e-11 65.9
MS.gene041187.t1 AT1G64583 30.370 135 92 1 231 363 214 348 5.44e-11 65.5
MS.gene041187.t1 AT1G78940 32.031 128 68 4 446 562 365 484 5.64e-11 65.9
MS.gene041187.t1 AT1G20300 21.399 243 180 4 140 376 136 373 5.69e-11 65.5
MS.gene041187.t1 AT1G74580 23.611 216 156 3 149 359 316 527 5.86e-11 65.9
MS.gene041187.t1 AT1G74580 23.611 216 156 3 149 359 316 527 5.86e-11 65.9
MS.gene041187.t1 AT1G74580 23.611 216 156 3 149 359 316 527 5.86e-11 65.9
MS.gene041187.t1 AT1G64583 30.370 135 92 1 231 363 189 323 5.95e-11 65.5
MS.gene041187.t1 AT1G62720 23.333 210 151 2 149 355 134 336 5.97e-11 65.5
MS.gene041187.t1 AT1G62680 26.901 171 116 1 231 401 333 494 6.38e-11 65.5
MS.gene041187.t1 AT1G62680 26.901 171 116 1 231 401 333 494 6.38e-11 65.5
MS.gene041187.t1 AT1G17540 32.867 143 73 6 431 562 386 516 6.68e-11 65.9
MS.gene041187.t1 AT5G21222 21.778 225 170 3 132 355 474 693 7.00e-11 65.9
MS.gene041187.t1 AT5G21222 21.778 225 170 3 132 355 474 693 7.00e-11 65.9
MS.gene041187.t1 AT5G21222 21.778 225 170 3 132 355 474 693 7.00e-11 65.9
MS.gene041187.t1 AT5G21222 21.778 225 170 3 132 355 474 693 7.00e-11 65.9
MS.gene041187.t1 AT1G78940 32.031 128 68 4 446 562 436 555 7.60e-11 65.5
MS.gene041187.t1 AT1G63320 25.758 132 89 1 231 353 19 150 7.71e-11 62.0
MS.gene041187.t1 AT1G78940 32.031 128 68 4 446 562 436 555 8.37e-11 65.5
MS.gene041187.t1 AT2G35130 23.118 186 139 2 160 345 232 413 8.54e-11 65.1
MS.gene041187.t1 AT1G64100 26.744 172 113 3 231 400 264 424 9.05e-11 65.1
MS.gene041187.t1 AT1G64100 26.744 172 113 3 231 400 264 424 9.05e-11 65.1
MS.gene041187.t1 AT2G15630 24.194 186 137 1 149 334 427 608 9.17e-11 65.1
MS.gene041187.t1 AT2G35130 23.118 186 139 2 160 345 235 416 9.35e-11 65.1
MS.gene041187.t1 AT3G04760 22.705 207 154 2 147 352 331 532 9.44e-11 65.1

Find 121 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAATGTTTGGATATC+TGG 0.170597 5.1:-11017553 None:intergenic
GCAAGATACTTAGAAGTTTC+AGG 0.242330 5.1:+11017146 MS.gene041187:CDS
ATCTATGAGTATGCTGAAAA+TGG 0.244806 5.1:+11019872 MS.gene041187:CDS
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5.1:+11019469 MS.gene041187:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5.1:+11017733 MS.gene041187:CDS
TTGGCTGGATCCGCGGTCTT+TGG 0.315039 5.1:+11017042 MS.gene041187:CDS
CTGCATGGAATTTCTTCTGC+TGG 0.322708 5.1:+11017179 MS.gene041187:CDS
GAAGATGGTTGATCAAGTTT+TGG 0.326422 5.1:-11019424 None:intergenic
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5.1:+11019313 MS.gene041187:CDS
TCACAATGTGATCATGTAGA+TGG 0.351608 5.1:+11017004 MS.gene041187:CDS
TGGCTAGTGCCTTACAGAAT+TGG 0.353434 5.1:+11017062 MS.gene041187:CDS
GCATTAGACCTGAAAATGTT+TGG 0.360031 5.1:-11017561 None:intergenic
AAAGTCAATGATTAACCTTA+TGG 0.364393 5.1:-11017344 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5.1:-11020021 None:intergenic
AACTCTTTGATGGCCGAATC+AGG 0.382129 5.1:-11017763 None:intergenic
AGTAAAATGTTTGATGAAGT+TGG 0.386223 5.1:+11016767 None:intergenic
CAAGCCAACAATGTATGAAA+TGG 0.386975 5.1:+11019640 MS.gene041187:CDS
TGGAAATCTTGTGAAACTAA+TGG 0.394475 5.1:+11019814 MS.gene041187:CDS
GTTAATGAGATGGAAGTTGA+TGG 0.398695 5.1:+11016797 MS.gene041187:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5.1:-11017258 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.403178 5.1:-11017773 None:intergenic
TTCTGGTTCCATACCTGATT+CGG 0.410204 5.1:+11017750 MS.gene041187:CDS
TGCTGGGTTGCTGATCAACC+TGG 0.420026 5.1:+11017196 MS.gene041187:CDS
ACTTACAATAACCTTCTATC+AGG 0.420198 5.1:-11017681 None:intergenic
GTCCTTCCACTTGCATTACC+TGG 0.422582 5.1:+11017865 MS.gene041187:CDS
GCCAGACGCGTATCTGTATA+AGG 0.430893 5.1:+11017657 MS.gene041187:CDS
ATCGGAATTCCTTCCACACT+TGG 0.431442 5.1:-11017488 None:intergenic
AACAATGATCGAATACTTTG+TGG 0.433378 5.1:+11017409 MS.gene041187:CDS
CAACAAGAGCTGCACTGGCT+TGG 0.436660 5.1:+11017704 MS.gene041187:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5.1:+11019898 MS.gene041187:CDS
CTGAAAATGTTTGGATATCT+GGG 0.442804 5.1:-11017552 None:intergenic
AAGAAATTCCATGCAGTATC+CGG 0.442847 5.1:-11017172 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5.1:-11016914 None:intergenic
GTTTACAAGGCTAATATAGA+TGG 0.444846 5.1:+11019719 MS.gene041187:CDS
TGCATGGAATTTCTTCTGCT+GGG 0.445487 5.1:+11017180 MS.gene041187:CDS
GAAGGATGAAGGAATTCTTA+AGG 0.446233 5.1:+11016862 MS.gene041187:CDS
ACATCCATTTCATACATTGT+TGG 0.446716 5.1:-11019644 None:intergenic
GATTCACTTAAAACCTTGGC+TGG 0.457260 5.1:+11017027 MS.gene041187:CDS
GGAAATCTTGTGAAACTAAT+GGG 0.462411 5.1:+11019815 MS.gene041187:CDS
CTTGATCAACCATCTTCAAA+TGG 0.466617 5.1:+11019430 MS.gene041187:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5.1:-11016913 None:intergenic
CTGTATAAGGTCCTGATAGA+AGG 0.471205 5.1:+11017670 MS.gene041187:CDS
GGTGAGTTTGTTATTGCAGC+AGG 0.472558 5.1:+11016838 MS.gene041187:CDS
ACTCGGTGGTTTCGCTTACA+TGG 0.474294 5.1:+11019939 MS.gene041187:CDS
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5.1:+11017782 MS.gene041187:CDS
TCATCTCATCAAGCATGTCC+AGG 0.481198 5.1:-11017513 None:intergenic
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5.1:+11017790 MS.gene041187:CDS
CATCTCGAAGATCAGAATAG+AGG 0.487430 5.1:+11017300 MS.gene041187:CDS
TAAGTCAACAAGAGCTGCAC+TGG 0.490541 5.1:+11017699 MS.gene041187:CDS
ATAGCCATGGATGTTGCAAT+TGG 0.492998 5.1:+11019977 MS.gene041187:CDS
CAAAGTTTGTGTGGACAACT+AGG 0.503840 5.1:+11017116 MS.gene041187:CDS
GATTGGTGAATCAGTTTACA+AGG 0.505991 5.1:+11019706 MS.gene041187:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5.1:+11019689 MS.gene041187:CDS
ATCAAGCATGTCCAGGGTAT+CGG 0.509612 5.1:-11017506 None:intergenic
ACAATGATCGAATACTTTGT+GGG 0.511017 5.1:+11017410 MS.gene041187:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5.1:-11019315 None:intergenic
TTGCAGCAGGTGAAGGATGA+AGG 0.514811 5.1:+11016851 MS.gene041187:CDS
ATCAGGACTCCAATTCTGTA+AGG 0.515595 5.1:-11017071 None:intergenic
TGAAGGAATTCTTAAGGATG+TGG 0.518418 5.1:+11016868 MS.gene041187:CDS
ATGGGATTCACTTAAAACCT+TGG 0.520730 5.1:+11017023 MS.gene041187:CDS
ACCTTATACAGATACGCGTC+TGG 0.524198 5.1:-11017658 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5.1:-11019981 None:intergenic
GTATGAAATGGATGTGATCA+TGG 0.524330 5.1:+11019652 MS.gene041187:CDS
TTTGATGGCCGAATCAGGTA+TGG 0.524348 5.1:-11017758 None:intergenic
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5.1:+11016885 MS.gene041187:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5.1:+11017381 MS.gene041187:CDS
ACTTAGAAGTTTCAGGTCAC+CGG 0.527754 5.1:+11017153 MS.gene041187:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5.1:+11016884 MS.gene041187:CDS
CACAATGTGATCATGTAGAT+GGG 0.532033 5.1:+11017005 MS.gene041187:CDS
TCTAGTGCTGATACCTCATC+AGG 0.535975 5.1:-11017088 None:intergenic
ATTAACCTTATGGTACTGAA+TGG 0.545713 5.1:-11017334 None:intergenic
GGTTAATGTTCTTAAAAGAG+AGG 0.546099 5.1:-11017467 None:intergenic
TTCTATTGATAGCAGTGATG+AGG 0.550194 5.1:+11016943 MS.gene041187:CDS
TTAAGAACATTAACCAAGTG+TGG 0.552345 5.1:+11017475 MS.gene041187:CDS
ATCTTTGAAAACTTCAAACT+CGG 0.553009 5.1:+11019922 MS.gene041187:CDS
GAACATTAACCAAGTGTGGA+AGG 0.555715 5.1:+11017479 MS.gene041187:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5.1:+11017253 MS.gene041187:CDS
TTAGTTTCACAAGATTTCCA+TGG 0.557743 5.1:-11019811 None:intergenic
GACTACCATTCAGTACCATA+AGG 0.558337 5.1:+11017329 MS.gene041187:CDS
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5.1:-11017257 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5.1:+11017797 MS.gene041187:CDS
GATGAGAATGAGGACGAGGG+TGG 0.559684 5.1:+11016965 MS.gene041187:CDS
AATTGCAACATCCATGGCTA+TGG 0.562845 5.1:-11019975 None:intergenic
ATCTCGAAGATCAGAATAGA+GGG 0.563251 5.1:+11017301 MS.gene041187:CDS
GTTTGTGTGGACAACTAGGT+TGG 0.566053 5.1:+11017120 MS.gene041187:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5.1:+11017804 MS.gene041187:CDS
TATATATTATGAGTAAATCC+AGG 0.571391 5.1:-11017214 None:intergenic
CAGTGATGAGGATGAGAATG+AGG 0.572880 5.1:+11016955 MS.gene041187:CDS
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5.1:-11017798 None:intergenic
TGATGAGGTATCAGCACTAG+AGG 0.580742 5.1:+11017090 MS.gene041187:CDS
TCAGAGAATAACCATAGCCA+TGG 0.584198 5.1:+11019964 MS.gene041187:CDS
TTTGTTATTGCAGCAGGTGA+AGG 0.584701 5.1:+11016844 MS.gene041187:CDS
TAAAACCTTGGCTGGATCCG+CGG 0.590765 5.1:+11017035 MS.gene041187:CDS
CTGACAGTCCATACATGACC+AGG 0.594467 5.1:-11017883 None:intergenic
TGGAAGGAATTCCGATACCC+TGG 0.598845 5.1:+11017495 MS.gene041187:CDS
CATTGAAAAGAGTTTCTGCA+CGG 0.599322 5.1:-11017614 None:intergenic
TGAGGATGAGAATGAGGACG+AGG 0.601840 5.1:+11016961 MS.gene041187:CDS
TTTGAAAACTTCAAACTCGG+TGG 0.605841 5.1:+11019925 MS.gene041187:CDS
AAAGACCGCGGATCCAGCCA+AGG 0.608186 5.1:-11017040 None:intergenic
TCAGGTCACCGGATACTGCA+TGG 0.610625 5.1:+11017164 MS.gene041187:CDS
AGGGATCAAAACTGAACGGT+CGG 0.610669 5.1:-11019389 None:intergenic
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5.1:+11016895 MS.gene041187:CDS
AACAAACTCACCGTTCGACT+AGG 0.617703 5.1:-11016827 None:intergenic
CATCTCATCAAGCATGTCCA+GGG 0.618669 5.1:-11017512 None:intergenic
TAGAGGGTGCAAAGTTTGTG+TGG 0.619451 5.1:+11017107 MS.gene041187:CDS
ACATGACCAGGTAATGCAAG+TGG 0.620837 5.1:-11017871 None:intergenic
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5.1:-11017827 None:intergenic
TGGAATATTACCTAGTCGAA+CGG 0.624584 5.1:+11016817 MS.gene041187:CDS
ACAGAATTGGAGTCCTGATG+AGG 0.639931 5.1:+11017075 MS.gene041187:CDS
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5.1:-11017867 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5.1:+11017843 MS.gene041187:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5.1:+11017091 MS.gene041187:CDS
GGTGTGTCTTCTGACAATGA+TGG 0.650870 5.1:+11019836 MS.gene041187:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5.1:-11019314 None:intergenic
GAAATGGATGTGATCATGGA+AGG 0.661178 5.1:+11019656 MS.gene041187:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5.1:+11019794 MS.gene041187:CDS
GAGGATGAGAATGAGGACGA+GGG 0.684142 5.1:+11016962 MS.gene041187:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5.1:-11019393 None:intergenic
AAAATGGATCACTTGAAGAG+TGG 0.692384 5.1:+11019888 MS.gene041187:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5.1:+11017831 MS.gene041187:CDS
AAGGCACTAGCCAAAGACCG+CGG 0.751118 5.1:-11017052 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGCATATATATAA+TGG + chr5.1:11018928-11018947 MS.gene041187:intron 10.0%
!! ATGCAATTATAATATAATAC+AGG - chr5.1:11018920-11018939 None:intergenic 15.0%
!!! TTTTTTTTGTTGGTTTAAAA+GGG + chr5.1:11018436-11018455 MS.gene041187:intron 15.0%
!!! TTTTTTTTTGTTGGTTTAAA+AGG + chr5.1:11018435-11018454 MS.gene041187:intron 15.0%
!! TAAACCAACAAAAAAAAAAG+AGG - chr5.1:11018433-11018452 None:intergenic 20.0%
!! TAAAGATGGTAAGAATAATA+TGG - chr5.1:11019094-11019113 None:intergenic 20.0%
!! TATATATTATGAGTAAATCC+AGG - chr5.1:11017217-11017236 None:intergenic 20.0%
!!! CTTAAACTGTGATTTATTTT+GGG + chr5.1:11018060-11018079 MS.gene041187:intron 20.0%
!!! TCAAATAGTTTAGTTTCAAA+GGG + chr5.1:11017940-11017959 MS.gene041187:intron 20.0%
!!! TTCAAATAGTTTAGTTTCAA+AGG + chr5.1:11017939-11017958 MS.gene041187:intron 20.0%
! AAAGTCAATGATTAACCTTA+TGG - chr5.1:11017347-11017366 None:intergenic 25.0%
! AATTGTCTTACAAAAAGAGT+TGG + chr5.1:11018360-11018379 MS.gene041187:intron 25.0%
! AGTATCTTATTACTTATGTG+TGG + chr5.1:11019272-11019291 MS.gene041187:intron 25.0%
! ATTCTGCCATAAGAATATAA+CGG - chr5.1:11018548-11018567 None:intergenic 25.0%
! CCAAAATAAATCACAGTTTA+AGG - chr5.1:11018062-11018081 None:intergenic 25.0%
! GAATATTAATCCCTCAAATA+GGG + chr5.1:11018478-11018497 MS.gene041187:intron 25.0%
! TATATTGAAACCTATGTAAC+TGG + chr5.1:11018866-11018885 MS.gene041187:intron 25.0%
! TATGGTATTATAACCCAATT+TGG - chr5.1:11019076-11019095 None:intergenic 25.0%
! TATGGTTTAACGTTTAACAA+AGG - chr5.1:11018960-11018979 None:intergenic 25.0%
! TATTATTTGTTCCCTATTTC+TGG - chr5.1:11018817-11018836 None:intergenic 25.0%
! TCAAAGAATCAATTGAACAA+AGG + chr5.1:11019244-11019263 MS.gene041187:intron 25.0%
! TGAATATTAATCCCTCAAAT+AGG + chr5.1:11018477-11018496 MS.gene041187:intron 25.0%
! TTAACACCGTTATATTCTTA+TGG + chr5.1:11018539-11018558 MS.gene041187:intron 25.0%
! TTGCACAATCATATAATGAA+TGG + chr5.1:11018236-11018255 MS.gene041187:intron 25.0%
! TTTGAAGATATGAAGAATTC+TGG + chr5.1:11017733-11017752 MS.gene041187:CDS 25.0%
!! ATCTTTGAAAACTTCAAACT+CGG + chr5.1:11019922-11019941 MS.gene041187:CDS 25.0%
!! CCTTAAACTGTGATTTATTT+TGG + chr5.1:11018059-11018078 MS.gene041187:intron 25.0%
!! CTTGATGAGATGATTTTAAA+TGG + chr5.1:11017523-11017542 MS.gene041187:CDS 25.0%
!! CTTTTTGTAAGACAATTAGA+AGG - chr5.1:11018357-11018376 None:intergenic 25.0%
!! TGTTCAATTGATTCTTTGAA+GGG - chr5.1:11019243-11019262 None:intergenic 25.0%
!! TTGTTCAATTGATTCTTTGA+AGG - chr5.1:11019244-11019263 None:intergenic 25.0%
!!! AGGTTAATCATTGACTTTTA+TGG + chr5.1:11017349-11017368 MS.gene041187:CDS 25.0%
!!! AGTTCCTCTTTTTTTTTTGT+TGG + chr5.1:11018426-11018445 MS.gene041187:intron 25.0%
!!! GAGTTTTGAGAATGTATTAT+TGG + chr5.1:11018121-11018140 MS.gene041187:intron 25.0%
!!! GGTTAATCATTGACTTTTAT+GGG + chr5.1:11017350-11017369 MS.gene041187:CDS 25.0%
AAATCACAGTTTAAGGAACT+TGG - chr5.1:11018055-11018074 None:intergenic 30.0%
AACAATGATCGAATACTTTG+TGG + chr5.1:11017409-11017428 MS.gene041187:CDS 30.0%
AATCAAAAAAGATGCTTCTG+AGG + chr5.1:11019763-11019782 MS.gene041187:CDS 30.0%
ACAATGATCGAATACTTTGT+GGG + chr5.1:11017410-11017429 MS.gene041187:CDS 30.0%
ACATCCATTTCATACATTGT+TGG - chr5.1:11019647-11019666 None:intergenic 30.0%
ACCAAACTTTGAACTAACAA+GGG - chr5.1:11019317-11019336 None:intergenic 30.0%
ACTTACAATAACCTTCTATC+AGG - chr5.1:11017684-11017703 None:intergenic 30.0%
ATCTATGAGTATGCTGAAAA+TGG + chr5.1:11019872-11019891 MS.gene041187:CDS 30.0%
ATGCCTTTACCAAAATGTTA+AGG - chr5.1:11019000-11019019 None:intergenic 30.0%
ATGTGGATGAATTGTTTGAA+GGG + chr5.1:11016885-11016904 MS.gene041187:CDS 30.0%
CTGAAAATGTTTGGATATCT+GGG - chr5.1:11017555-11017574 None:intergenic 30.0%
GCATGATTTCATACTTGTTT+GGG + chr5.1:11019125-11019144 MS.gene041187:intron 30.0%
GGAAATCTTGTGAAACTAAT+GGG + chr5.1:11019815-11019834 MS.gene041187:CDS 30.0%
GGTTAATGTTCTTAAAAGAG+AGG - chr5.1:11017470-11017489 None:intergenic 30.0%
GTTTACAAGGCTAATATAGA+TGG + chr5.1:11019719-11019738 MS.gene041187:CDS 30.0%
TATTAGATGTCAAGCTTATG+TGG + chr5.1:11018754-11018773 MS.gene041187:intron 30.0%
TCATATAATGAATGGACCTT+TGG + chr5.1:11018244-11018263 MS.gene041187:intron 30.0%
TGCCTTTACCAAAATGTTAA+GGG - chr5.1:11018999-11019018 None:intergenic 30.0%
TGCGCAGAATATAATAAAGA+TGG - chr5.1:11019108-11019127 None:intergenic 30.0%
TGGAAATCTTGTGAAACTAA+TGG + chr5.1:11019814-11019833 MS.gene041187:CDS 30.0%
TTAAGAACATTAACCAAGTG+TGG + chr5.1:11017475-11017494 MS.gene041187:CDS 30.0%
TTAGTTTCACAAGATTTCCA+TGG - chr5.1:11019814-11019833 None:intergenic 30.0%
TTTCAAATCTTAGACACTGT+TGG - chr5.1:11019156-11019175 None:intergenic 30.0%
TTTGAGAATGTATTATTGGC+AGG + chr5.1:11018125-11018144 MS.gene041187:intron 30.0%
! ATGCAGTATTTTTCACAACT+TGG + chr5.1:11017580-11017599 MS.gene041187:CDS 30.0%
! ATTAACCTTATGGTACTGAA+TGG - chr5.1:11017337-11017356 None:intergenic 30.0%
! CTTATAATTGGTATTAGCCT+AGG + chr5.1:11019481-11019500 MS.gene041187:intron 30.0%
! CTTTTTCTTCCATTTGAAGA+TGG - chr5.1:11019442-11019461 None:intergenic 30.0%
! TACTGCACCTTAAAACTTTT+TGG - chr5.1:11018094-11018113 None:intergenic 30.0%
! TTTTCAGCTAACATTTCAAC+TGG - chr5.1:11019346-11019365 None:intergenic 30.0%
!! AATGAAAAAAAGCACTTCCT+AGG - chr5.1:11019501-11019520 None:intergenic 30.0%
!! CAAAATCTGGCTCTTATAAT+TGG + chr5.1:11019469-11019488 MS.gene041187:CDS 30.0%
!!! AAACTGTGATTTATTTTGGG+AGG + chr5.1:11018063-11018082 MS.gene041187:intron 30.0%
!!! AACTGTGATTTATTTTGGGA+GGG + chr5.1:11018064-11018083 MS.gene041187:intron 30.0%
!!! ACTTTTTTTTAGGCATAGCA+TGG - chr5.1:11018613-11018632 None:intergenic 30.0%
!!! CTTTTTTTTAGGCATAGCAT+GGG - chr5.1:11018612-11018631 None:intergenic 30.0%
!!! TGGAGTTTTAGTTAATGAGA+TGG + chr5.1:11016787-11016806 MS.gene041187:CDS 30.0%
AAAAAGCAGCAGTCAAAATC+TGG + chr5.1:11019456-11019475 MS.gene041187:CDS 35.0%
AAAAAGCTAGACTCAAGCAA+AGG + chr5.1:11018695-11018714 MS.gene041187:intron 35.0%
AAAATGGATCACTTGAAGAG+TGG + chr5.1:11019888-11019907 MS.gene041187:CDS 35.0%
AACGATTGAATGAGATGACA+TGG - chr5.1:11018639-11018658 None:intergenic 35.0%
AAGAAATTCCATGCAGTATC+CGG - chr5.1:11017175-11017194 None:intergenic 35.0%
AAGTAACTTATCTGCAGTCT+CGG - chr5.1:11019597-11019616 None:intergenic 35.0%
ACACTCTTGATTCTTTCATC+CGG - chr5.1:11016917-11016936 None:intergenic 35.0%
ACCCTTGTTAGTTCAAAGTT+TGG + chr5.1:11019313-11019332 MS.gene041187:CDS 35.0%
ACGATTGAATGAGATGACAT+GGG - chr5.1:11018638-11018657 None:intergenic 35.0%
AGTAGCTATGTACCAGAAAT+AGG + chr5.1:11018802-11018821 MS.gene041187:intron 35.0%
ATAGCTACTTCGGATAGAAA+CGG - chr5.1:11018791-11018810 None:intergenic 35.0%
ATCTCGAAGATCAGAATAGA+GGG + chr5.1:11017301-11017320 MS.gene041187:CDS 35.0%
ATGGGATTCACTTAAAACCT+TGG + chr5.1:11017023-11017042 MS.gene041187:CDS 35.0%
ATGTTATCCAACCCTATTTG+AGG - chr5.1:11018492-11018511 None:intergenic 35.0%
ATTAATCCCTCAAATAGGGT+TGG + chr5.1:11018482-11018501 MS.gene041187:intron 35.0%
CAAGCCAACAATGTATGAAA+TGG + chr5.1:11019640-11019659 MS.gene041187:CDS 35.0%
CAATATACGTACACAAGTGA+TGG - chr5.1:11019536-11019555 None:intergenic 35.0%
CACAATGTGATCATGTAGAT+GGG + chr5.1:11017005-11017024 MS.gene041187:CDS 35.0%
CACCAAACTTTGAACTAACA+AGG - chr5.1:11019318-11019337 None:intergenic 35.0%
CATCAAGTTAGATGGTCATT+AGG + chr5.1:11019017-11019036 MS.gene041187:intron 35.0%
CATTGAAAAGAGTTTCTGCA+CGG - chr5.1:11017617-11017636 None:intergenic 35.0%
CCTGAAAATGTTTGGATATC+TGG - chr5.1:11017556-11017575 None:intergenic 35.0%
CGCATGATTTCATACTTGTT+TGG + chr5.1:11019124-11019143 MS.gene041187:intron 35.0%
CTGAGTGAGAATTGTAAGAT+TGG + chr5.1:11019689-11019708 MS.gene041187:CDS 35.0%
CTTGATCAACCATCTTCAAA+TGG + chr5.1:11019430-11019449 MS.gene041187:CDS 35.0%
GAAGGATGAAGGAATTCTTA+AGG + chr5.1:11016862-11016881 MS.gene041187:CDS 35.0%
GATCCTTCATTGTATTCACT+TGG + chr5.1:11018193-11018212 MS.gene041187:intron 35.0%
GATGTGGATGAATTGTTTGA+AGG + chr5.1:11016884-11016903 MS.gene041187:CDS 35.0%
GATTGGTGAATCAGTTTACA+AGG + chr5.1:11019706-11019725 MS.gene041187:CDS 35.0%
GCAAGATACTTAGAAGTTTC+AGG + chr5.1:11017146-11017165 MS.gene041187:CDS 35.0%
GCATTAGACCTGAAAATGTT+TGG - chr5.1:11017564-11017583 None:intergenic 35.0%
GCCTTTACCAAAATGTTAAG+GGG - chr5.1:11018998-11019017 None:intergenic 35.0%
GTAGCTATGTACCAGAAATA+GGG + chr5.1:11018803-11018822 MS.gene041187:intron 35.0%
GTATGAAATGGATGTGATCA+TGG + chr5.1:11019652-11019671 MS.gene041187:CDS 35.0%
GTTAATGAGATGGAAGTTGA+TGG + chr5.1:11016797-11016816 MS.gene041187:CDS 35.0%
TCACAATGTGATCATGTAGA+TGG + chr5.1:11017004-11017023 MS.gene041187:CDS 35.0%
TCATCTCATTCAATCGTTCT+TGG + chr5.1:11018641-11018660 MS.gene041187:intron 35.0%
TCTAAGCACAAAGTAACAAG+CGG + chr5.1:11018019-11018038 MS.gene041187:intron 35.0%
TCTTATTACTTATGTGTGGC+AGG + chr5.1:11019276-11019295 MS.gene041187:intron 35.0%
TGAAGGAATTCTTAAGGATG+TGG + chr5.1:11016868-11016887 MS.gene041187:CDS 35.0%
TGACCAAGTGAATACAATGA+AGG - chr5.1:11018199-11018218 None:intergenic 35.0%
TGGAATATTACCTAGTCGAA+CGG + chr5.1:11016817-11016836 MS.gene041187:CDS 35.0%
TGTTATCCAACCCTATTTGA+GGG - chr5.1:11018491-11018510 None:intergenic 35.0%
TTGTGCTTAGATTTCATGCA+TGG - chr5.1:11018010-11018029 None:intergenic 35.0%
TTTGAAAACTTCAAACTCGG+TGG + chr5.1:11019925-11019944 MS.gene041187:CDS 35.0%
! ACTGCAGATAAGTTACTTTG+AGG + chr5.1:11019599-11019618 MS.gene041187:intron 35.0%
! CCAGATATCCAAACATTTTC+AGG + chr5.1:11017553-11017572 MS.gene041187:CDS 35.0%
! GAAGATGGTTGATCAAGTTT+TGG - chr5.1:11019427-11019446 None:intergenic 35.0%
! TTCTATTGATAGCAGTGATG+AGG + chr5.1:11016943-11016962 MS.gene041187:CDS 35.0%
! TTGTTTGCCCCTTAACATTT+TGG + chr5.1:11018988-11019007 MS.gene041187:intron 35.0%
! TTTCTGGTACATAGCTACTT+CGG - chr5.1:11018801-11018820 None:intergenic 35.0%
!! AAGTTACTTTGAGGTGTTTC+AGG + chr5.1:11019608-11019627 MS.gene041187:intron 35.0%
!! AGTTTTGGTAAACTTGTCAC+AGG - chr5.1:11019412-11019431 None:intergenic 35.0%
!! GTTTTGGTAAACTTGTCACA+GGG - chr5.1:11019411-11019430 None:intergenic 35.0%
!! TTACTTCTAGCTTAACCAGT+GGG - chr5.1:11018582-11018601 None:intergenic 35.0%
!!! AATCGTTCTTGGCTTGTTTT+CGG + chr5.1:11018652-11018671 MS.gene041187:intron 35.0%
!!! ACTGTGATTTATTTTGGGAG+GGG + chr5.1:11018065-11018084 MS.gene041187:intron 35.0%
!!! GACATGGGTCACTTTTTTTT+AGG - chr5.1:11018623-11018642 None:intergenic 35.0%
AATTGCAACATCCATGGCTA+TGG - chr5.1:11019978-11019997 None:intergenic 40.0%
ACCTCTATCATATAGCCCAA+TGG - chr5.1:11017979-11017998 None:intergenic 40.0%
ACTTGAAGAGTGGTTGTTCT+CGG + chr5.1:11019898-11019917 MS.gene041187:CDS 40.0%
ATAGCCATGGATGTTGCAAT+TGG + chr5.1:11019977-11019996 MS.gene041187:CDS 40.0%
ATAGCCCAATGGATAACTCT+AGG - chr5.1:11017968-11017987 None:intergenic 40.0%
ATCAGGACTCCAATTCTGTA+AGG - chr5.1:11017074-11017093 None:intergenic 40.0%
ATCGTGTATGGACACCAAAT+TGG + chr5.1:11019059-11019078 MS.gene041187:intron 40.0%
ATTCTGCAGAAGGTAAACCA+TGG + chr5.1:11019794-11019813 MS.gene041187:CDS 40.0%
ATTGTTTGAAGGGATTTGCC+CGG + chr5.1:11016895-11016914 MS.gene041187:CDS 40.0%
CAAAGGAGAGTAGGTAAGAA+GGG + chr5.1:11018712-11018731 MS.gene041187:intron 40.0%
CAAAGTTTGTGTGGACAACT+AGG + chr5.1:11017116-11017135 MS.gene041187:CDS 40.0%
CACTCTTGATTCTTTCATCC+GGG - chr5.1:11016916-11016935 None:intergenic 40.0%
CATCTCGAAGATCAGAATAG+AGG + chr5.1:11017300-11017319 MS.gene041187:CDS 40.0%
CTGTATAAGGTCCTGATAGA+AGG + chr5.1:11017670-11017689 MS.gene041187:CDS 40.0%
CTTCACTAGCAACTCTTTGA+TGG - chr5.1:11017776-11017795 None:intergenic 40.0%
GAAATGGATGTGATCATGGA+AGG + chr5.1:11019656-11019675 MS.gene041187:CDS 40.0%
GAACATTAACCAAGTGTGGA+AGG + chr5.1:11017479-11017498 MS.gene041187:CDS 40.0%
GACTACCATTCAGTACCATA+AGG + chr5.1:11017329-11017348 MS.gene041187:CDS 40.0%
GATTCACTTAAAACCTTGGC+TGG + chr5.1:11017027-11017046 MS.gene041187:CDS 40.0%
GGAGCTAAAAATTCTGCAGA+AGG + chr5.1:11019784-11019803 MS.gene041187:CDS 40.0%
GGGCAAACAAGCAAAAGATA+TGG - chr5.1:11018978-11018997 None:intergenic 40.0%
GTTGACACTTCCAGTTACAT+AGG - chr5.1:11018879-11018898 None:intergenic 40.0%
TCACAGGGATCAAAACTGAA+CGG - chr5.1:11019396-11019415 None:intergenic 40.0%
TCAGAGAATAACCATAGCCA+TGG + chr5.1:11019964-11019983 MS.gene041187:CDS 40.0%
TCCATTGGGCTATATGATAG+AGG + chr5.1:11017975-11017994 MS.gene041187:intron 40.0%
TCGTGTATGGACACCAAATT+GGG + chr5.1:11019060-11019079 MS.gene041187:intron 40.0%
TGCATGGAATTTCTTCTGCT+GGG + chr5.1:11017180-11017199 MS.gene041187:CDS 40.0%
TTGCATTACCTGGTCATGTA+TGG + chr5.1:11017875-11017894 MS.gene041187:intron 40.0%
! ACTTAGAAGTTTCAGGTCAC+CGG + chr5.1:11017153-11017172 MS.gene041187:CDS 40.0%
! CGTGCAGAAACTCTTTTCAA+TGG + chr5.1:11017615-11017634 MS.gene041187:CDS 40.0%
! GGAATTAGCTCTTGTTCTGA+TGG + chr5.1:11018165-11018184 MS.gene041187:intron 40.0%
! GGGGTTGCCAAAAAGTTTTA+AGG + chr5.1:11018084-11018103 MS.gene041187:intron 40.0%
! TTTTCAATGGTCAGACAGAG+CGG + chr5.1:11017628-11017647 MS.gene041187:CDS 40.0%
!! CTTACTTCTAGCTTAACCAG+TGG - chr5.1:11018583-11018602 None:intergenic 40.0%
!! GCCCCTTAACATTTTGGTAA+AGG + chr5.1:11018994-11019013 MS.gene041187:intron 40.0%
!! GGTAAAGGCATCAAGTTAGA+TGG + chr5.1:11019009-11019028 MS.gene041187:intron 40.0%
!! TTCTGGTTCCATACCTGATT+CGG + chr5.1:11017750-11017769 MS.gene041187:CDS 40.0%
!! TTTGTTATTGCAGCAGGTGA+AGG + chr5.1:11016844-11016863 MS.gene041187:CDS 40.0%
AAATGCTGATGCTGCTCTGA+AGG + chr5.1:11017381-11017400 MS.gene041187:CDS 45.0%
AACAAACTCACCGTTCGACT+AGG - chr5.1:11016830-11016849 None:intergenic 45.0%
ACAGAATTGGAGTCCTGATG+AGG + chr5.1:11017075-11017094 MS.gene041187:CDS 45.0%
ACATGACCAGGTAATGCAAG+TGG - chr5.1:11017874-11017893 None:intergenic 45.0%
ACCTTATACAGATACGCGTC+TGG - chr5.1:11017661-11017680 None:intergenic 45.0%
AGACTCAAGCAAAGGAGAGT+AGG + chr5.1:11018703-11018722 MS.gene041187:intron 45.0%
AGGGATCAAAACTGAACGGT+CGG - chr5.1:11019392-11019411 None:intergenic 45.0%
ATCAAGCATGTCCAGGGTAT+CGG - chr5.1:11017509-11017528 None:intergenic 45.0%
ATCGGAATTCCTTCCACACT+TGG - chr5.1:11017491-11017510 None:intergenic 45.0%
CAGACCAATTGCAACATCCA+TGG - chr5.1:11019984-11020003 None:intergenic 45.0%
CAGTGATGAGGATGAGAATG+AGG + chr5.1:11016955-11016974 MS.gene041187:CDS 45.0%
CATCTCATCAAGCATGTCCA+GGG - chr5.1:11017515-11017534 None:intergenic 45.0%
CTGCATGGAATTTCTTCTGC+TGG + chr5.1:11017179-11017198 MS.gene041187:CDS 45.0%
GCAAAGGAGAGTAGGTAAGA+AGG + chr5.1:11018711-11018730 MS.gene041187:intron 45.0%
GCTCTCAACACATCAACCAA+AGG - chr5.1:11018263-11018282 None:intergenic 45.0%
GGTGCCTAGAGTTATCCATT+GGG + chr5.1:11017961-11017980 MS.gene041187:intron 45.0%
GGTGTGTCTTCTGACAATGA+TGG + chr5.1:11019836-11019855 MS.gene041187:CDS 45.0%
GTTTGTGTGGACAACTAGGT+TGG + chr5.1:11017120-11017139 MS.gene041187:CDS 45.0%
TAAGTCAACAAGAGCTGCAC+TGG + chr5.1:11017699-11017718 MS.gene041187:CDS 45.0%
TCATCTCATCAAGCATGTCC+AGG - chr5.1:11017516-11017535 None:intergenic 45.0%
TGGCTAGTGCCTTACAGAAT+TGG + chr5.1:11017062-11017081 MS.gene041187:CDS 45.0%
! AACTCTTTGATGGCCGAATC+AGG - chr5.1:11017766-11017785 None:intergenic 45.0%
! GATGAGGTATCAGCACTAGA+GGG + chr5.1:11017091-11017110 MS.gene041187:CDS 45.0%
! TAGAGGGTGCAAAGTTTGTG+TGG + chr5.1:11017107-11017126 MS.gene041187:CDS 45.0%
! TGATGAGGTATCAGCACTAG+AGG + chr5.1:11017090-11017109 MS.gene041187:CDS 45.0%
! TTTGATGGCCGAATCAGGTA+TGG - chr5.1:11017761-11017780 None:intergenic 45.0%
!! GGTGAGTTTGTTATTGCAGC+AGG + chr5.1:11016838-11016857 MS.gene041187:CDS 45.0%
!! TCTAGTGCTGATACCTCATC+AGG - chr5.1:11017091-11017110 None:intergenic 45.0%
!! TGCTGACTTCTGCAACTTGA+GGG + chr5.1:11018297-11018316 MS.gene041187:intron 45.0%
AGTTGCTAGTGAAGAGCCTC+TGG + chr5.1:11017782-11017801 MS.gene041187:CDS 50.0%
CAAGTTGCAGAAGTCAGCAG+AGG - chr5.1:11018296-11018315 None:intergenic 50.0%
CAGCTAGCTGACATCGTGTA+TGG + chr5.1:11019047-11019066 MS.gene041187:intron 50.0%
CATACACGATGTCAGCTAGC+TGG - chr5.1:11019049-11019068 None:intergenic 50.0%
CTGACAGTCCATACATGACC+AGG - chr5.1:11017886-11017905 None:intergenic 50.0%
GAAAGAAGGTAGACGGAGAG+AGG + chr5.1:11017804-11017823 MS.gene041187:CDS 50.0%
GAATTCGAACTCGAACCCAC+TGG + chr5.1:11018564-11018583 MS.gene041187:intron 50.0%
GACCAGGTAATGCAAGTGGA+AGG - chr5.1:11017870-11017889 None:intergenic 50.0%
GAGCTGCGAGGAAGTAAATG+TGG + chr5.1:11017843-11017862 MS.gene041187:CDS 50.0%
GAGGATGAGAATGAGGACGA+GGG + chr5.1:11016962-11016981 MS.gene041187:CDS 50.0%
GCCAGACGCGTATCTGTATA+AGG + chr5.1:11017657-11017676 MS.gene041187:CDS 50.0%
GGGTGCCTAGAGTTATCCAT+TGG + chr5.1:11017960-11017979 MS.gene041187:intron 50.0%
GTCCTTCCACTTGCATTACC+TGG + chr5.1:11017865-11017884 MS.gene041187:CDS 50.0%
TAAAACCTTGGCTGGATCCG+CGG + chr5.1:11017035-11017054 MS.gene041187:CDS 50.0%
TCCGTCTACCTTCTTTCCAG+AGG - chr5.1:11017801-11017820 None:intergenic 50.0%
TGAGGATGAGAATGAGGACG+AGG + chr5.1:11016961-11016980 MS.gene041187:CDS 50.0%
TGGAAGGAATTCCGATACCC+TGG + chr5.1:11017495-11017514 MS.gene041187:CDS 50.0%
TTGCAGCAGGTGAAGGATGA+AGG + chr5.1:11016851-11016870 MS.gene041187:CDS 50.0%
! ACTCGGTGGTTTCGCTTACA+TGG + chr5.1:11019939-11019958 MS.gene041187:CDS 50.0%
! GCCTCTGGAAAGAAGGTAGA+CGG + chr5.1:11017797-11017816 MS.gene041187:CDS 50.0%
! GCTGACTTCTGCAACTTGAG+GGG + chr5.1:11018298-11018317 MS.gene041187:intron 50.0%
! GTGAAGAGCCTCTGGAAAGA+AGG + chr5.1:11017790-11017809 MS.gene041187:CDS 50.0%
!! CAGGACATGAGTTGATGCTC+AGG + chr5.1:11018144-11018163 MS.gene041187:intron 50.0%
!! CTGCTGACTTCTGCAACTTG+AGG + chr5.1:11018296-11018315 MS.gene041187:intron 50.0%
ACGTCCATGTCGCGCTAGAA+GGG - chr5.1:11017260-11017279 None:intergenic 55.0%
AGCTGTTGAAGAGAGCTGCG+AGG + chr5.1:11017831-11017850 MS.gene041187:CDS 55.0%
ATGACCCTTCTAGCGCGACA+TGG + chr5.1:11017253-11017272 MS.gene041187:CDS 55.0%
GATGAGAATGAGGACGAGGG+TGG + chr5.1:11016965-11016984 MS.gene041187:CDS 55.0%
GCAGCTCTCTTCAACAGCTG+CGG - chr5.1:11017830-11017849 None:intergenic 55.0%
TACGTCCATGTCGCGCTAGA+AGG - chr5.1:11017261-11017280 None:intergenic 55.0%
TCAGGTCACCGGATACTGCA+TGG + chr5.1:11017164-11017183 MS.gene041187:CDS 55.0%
TGCTGGGTTGCTGATCAACC+TGG + chr5.1:11017196-11017215 MS.gene041187:CDS 55.0%
! AAGGCACTAGCCAAAGACCG+CGG - chr5.1:11017055-11017074 None:intergenic 55.0%
!! CAACAAGAGCTGCACTGGCT+TGG + chr5.1:11017704-11017723 MS.gene041187:CDS 55.0%
AAAGACCGCGGATCCAGCCA+AGG - chr5.1:11017043-11017062 None:intergenic 60.0%
CACGATGTCAGCTAGCTGGC+TGG - chr5.1:11019045-11019064 None:intergenic 60.0%
TTGGCTGGATCCGCGGTCTT+TGG + chr5.1:11017042-11017061 MS.gene041187:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 11016773 11020030 11016773 ID=MS.gene041187
chr5.1 mRNA 11016773 11020030 11016773 ID=MS.gene041187.t1;Parent=MS.gene041187
chr5.1 exon 11016773 11017891 11016773 ID=MS.gene041187.t1.exon1;Parent=MS.gene041187.t1
chr5.1 CDS 11016773 11017891 11016773 ID=cds.MS.gene041187.t1;Parent=MS.gene041187.t1
chr5.1 exon 11019298 11019490 11019298 ID=MS.gene041187.t1.exon2;Parent=MS.gene041187.t1
chr5.1 CDS 11019298 11019490 11019298 ID=cds.MS.gene041187.t1;Parent=MS.gene041187.t1
chr5.1 exon 11019630 11020030 11019630 ID=MS.gene041187.t1.exon3;Parent=MS.gene041187.t1
chr5.1 CDS 11019630 11020030 11019630 ID=cds.MS.gene041187.t1;Parent=MS.gene041187.t1
Gene Sequence

>MS.gene041187

ATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGGAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGAATTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGGACGAGGGTGGAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATTCACTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTTGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTCAGGTCACCGGATACTGCATGGAATTTCTTCTGCTGGGTTGCTGATCAACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTCGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGTACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACAATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGTAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCTGGTTCCATACCTGATTCGGCCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGAAGATCTCACAAAAGTCTATAACATTTATTCAAATAGTTTAGTTTCAAAGGGTGCCTAGAGTTATCCATTGGGCTATATGATAGAGGTGTACTTCTCCATGCATGAAATCTAAGCACAAAGTAACAAGCGGAAAGCAATAACCAAGTTCCTTAAACTGTGATTTATTTTGGGAGGGGTTGCCAAAAAGTTTTAAGGTGCAGTAATTTTTTGAGTTTTGAGAATGTATTATTGGCAGGACATGAGTTGATGCTCAGGAATTAGCTCTTGTTCTGATGGATATCGATCCTTCATTGTATTCACTTGGTCAAGTGCAAGAAATCATCTTTGCACAATCATATAATGAATGGACCTTTGGTTGATGTGTTGAGAGCTACAATCAGTCCTCTGCTGACTTCTGCAACTTGAGGGGAATCTAATGATTGTCTTATTGCAATTAACAATTCCTTCTAATTGTCTTACAAAAAGAGTTGGTTACAAAATCTCATCTAATATATTGTTTTGATATATTGTTTTGAGTTCCTCTTTTTTTTTTGTTGGTTTAAAAGGGTATATCTTTTCGCAACTCTGAATATTAATCCCTCAAATAGGGTTGGATAACATGAACGACAAAGTTGTTTCTTAAGAGTTTTAACACCGTTATATTCTTATGGCAGAATTCGAACTCGAACCCACTGGTTAAGCTAGAAGTAAGAAGAGACCCATGCTATGCCTAAAAAAAAGTGACCCATGTCATCTCATTCAATCGTTCTTGGCTTGTTTTCGGTTTAGATGAATATGAAGTACAAAAAGCTAGACTCAAGCAAAGGAGAGTAGGTAAGAAGGGCATCTTATTATTTTTAATATATTAGATGTCAAGCTTATGTGGCGATGTAAACACCGTTTCTATCCGAAGTAGCTATGTACCAGAAATAGGGAACAAATAATATAAATTGTGAGTTTGTCAATGTGTTTTAATATATTGAAACCTATGTAACTGGAAGTGTCAACATTGTAAGCTGTTCATTGCCTGTATTATATTATAATTGCATATATATAATGGCATTAGCCTTTGTTAAACGTTAAACCATATCTTTTGCTTGTTTGCCCCTTAACATTTTGGTAAAGGCATCAAGTTAGATGGTCATTAGGTACCAGCCAGCTAGCTGACATCGTGTATGGACACCAAATTGGGTTATAATACCATATTATTCTTACCATCTTTATTATATTCTGCGCATGATTTCATACTTGTTTGGGATTTGCCAACAGTGTCTAAGATTTGAAAAAGAAAAATAGTAGAACTAATGACAGAGACAGTGTCTAAGATTTCATACTTTATTCTGCAAGTGCCCTTCAAAGAATCAATTGAACAAAGGAATAAAGTATCTTATTACTTATGTGTGGCAGGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGAAAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGATCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTATTAGCCTAGGAAGTGCTTTTTTTCATTTTAGTTTTAACACCATCACTTGTGTACGTATATTGTCTCAAAATGAAGAGATTGAATAGAAGTACTTCATCGTCCGAGACTGCAGATAAGTTACTTTGAGGTGTTTCAGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAGAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTGTTTTCTGATCTATGAGTATGCTGAAAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAACTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCATAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>MS.gene041187.t1

MFDEVGVLVNEMEVDGILPSRTVSLLLQQVKDEGILKDVDELFEGICPDERIKSVSFSIDSSDEDENEDEGGNENEVSQCDHVDGIHLKPWLDPRSLASALQNWSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTAWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDRLISKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNNDRILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSIPDSAIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHDNDNVTLVSSKFGASPVEMLAENNHNFTASTDRSVLIPVTSLPKLDQPSSNGRKSSSQNLALIIGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKANIDGRVLAVRKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLIYEYAENGSLEEWLFSESLKTSNSVVSLTWSQRITIAMDVAIGLQMNILIQE