AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041300.t1 MTR_7g037260 38.426 216 64 4 21 172 147 357 1.08e-40 140
MS.gene041300.t1 MTR_7g037130 37.500 216 66 4 21 172 147 357 1.01e-37 132
MS.gene041300.t1 MTR_7g451170 56.311 103 44 1 21 123 193 294 7.27e-37 131
MS.gene041300.t1 MTR_7g035300 38.009 221 75 8 2 173 26 233 1.94e-35 124
MS.gene041300.t1 MTR_4g088015 51.724 116 52 2 8 123 213 324 7.60e-35 127
MS.gene041300.t1 MTR_3g463400 47.500 120 62 1 21 140 135 253 1.01e-34 126
MS.gene041300.t1 MTR_7g450950 48.800 125 48 2 9 118 132 255 1.90e-34 124
MS.gene041300.t1 MTR_1g057980 49.573 117 51 2 21 137 82 190 2.69e-34 122
MS.gene041300.t1 MTR_3g077650 54.369 103 46 1 21 123 183 284 3.94e-34 125
MS.gene041300.t1 MTR_4g105660 51.456 103 49 1 21 123 182 283 1.34e-32 120
MS.gene041300.t1 MTR_5g049190 48.718 117 59 1 9 125 9 124 5.10e-32 115
MS.gene041300.t1 MTR_7g035350 41.447 152 57 2 22 142 228 378 9.30e-32 118
MS.gene041300.t1 MTR_5g070020 50.485 103 50 1 21 123 124 225 1.86e-31 116
MS.gene041300.t1 MTR_7g061330 49.000 100 48 2 18 115 74 172 2.39e-25 101
MS.gene041300.t1 MTR_7g061330 37.634 93 58 0 22 114 28 120 5.24e-16 75.1
MS.gene041300.t1 MTR_7g061330 49.000 100 48 2 18 115 110 208 2.43e-25 101
MS.gene041300.t1 MTR_7g061330 37.634 93 58 0 22 114 64 156 6.05e-16 74.7
MS.gene041300.t1 MTR_7g461410 49.000 100 48 2 18 115 110 208 2.43e-25 101
MS.gene041300.t1 MTR_7g461410 37.634 93 58 0 22 114 64 156 6.05e-16 74.7
MS.gene041300.t1 MTR_1g026870 46.000 100 51 2 18 115 82 180 1.05e-24 100
MS.gene041300.t1 MTR_1g026870 34.043 94 62 0 21 114 35 128 1.26e-14 71.2
MS.gene041300.t1 MTR_3g110028 44.681 94 51 1 22 115 88 180 7.37e-24 97.8
MS.gene041300.t1 MTR_3g101290 39.683 126 71 3 13 135 29 152 9.81e-24 93.6
MS.gene041300.t1 MTR_5g010650 46.078 102 52 2 15 114 104 204 2.97e-23 95.5
MS.gene041300.t1 MTR_5g038910 39.860 143 76 4 12 146 16 156 2.97e-23 94.7
MS.gene041300.t1 MTR_5g038910 39.860 143 76 4 12 146 16 156 4.06e-23 95.1
MS.gene041300.t1 MTR_4g019370 42.000 100 57 1 22 121 41 139 9.91e-23 92.8
MS.gene041300.t1 MTR_6g027340 40.566 106 62 1 15 120 12 116 2.53e-22 89.4
MS.gene041300.t1 MTR_8g468380 43.137 102 57 1 20 121 23 123 9.55e-22 91.3
MS.gene041300.t1 MTR_6g027360 42.453 106 60 1 15 120 74 178 1.02e-21 89.7
MS.gene041300.t1 MTR_5g041570 40.870 115 66 2 3 116 117 230 9.03e-21 88.2
MS.gene041300.t1 MTR_7g115650 45.361 97 47 3 22 115 17 110 1.79e-20 84.3
MS.gene041300.t1 MTR_4g082040 44.211 95 52 1 22 116 108 201 2.05e-20 87.4
MS.gene041300.t1 MTR_2g064160 41.053 95 54 2 22 115 16 109 9.51e-20 84.3
MS.gene041300.t1 MTR_6g074860 42.000 100 56 2 22 120 7 105 1.38e-19 82.8
MS.gene041300.t1 MTR_8g017440 39.423 104 61 2 13 115 8 110 2.82e-19 83.6
MS.gene041300.t1 MTR_1g045610 44.086 93 50 2 22 113 26 117 4.53e-19 81.6
MS.gene041300.t1 MTR_1g112760 40.000 95 55 2 22 115 18 111 4.74e-19 81.3
MS.gene041300.t1 MTR_4g065017 38.312 154 70 8 22 164 22 161 4.96e-19 82.8
MS.gene041300.t1 MTR_4g100720 42.105 95 53 2 22 115 18 111 5.99e-19 79.7
MS.gene041300.t1 MTR_2g089420 40.385 104 60 2 22 124 16 118 6.02e-19 83.2
MS.gene041300.t1 MTR_1g085640 31.757 148 95 4 22 167 17 160 1.03e-18 82.4
MS.gene041300.t1 MTR_1g073170 41.935 93 52 2 22 113 25 116 1.23e-18 80.5
MS.gene041300.t1 MTR_3g077110 41.667 96 52 3 22 115 17 110 1.29e-18 81.6
MS.gene041300.t1 MTR_0008s0470 39.423 104 61 2 22 124 18 120 1.49e-18 80.9
MS.gene041300.t1 MTR_1g085040 40.000 100 58 2 22 120 17 115 1.76e-18 81.6
MS.gene041300.t1 MTR_8g017540 38.462 104 62 2 13 115 54 156 1.85e-18 81.6
MS.gene041300.t1 MTR_0197s0010 41.837 98 53 3 20 115 4 99 2.05e-18 79.3
MS.gene041300.t1 MTR_7g076740 42.268 97 49 3 22 114 17 110 2.17e-18 80.5
MS.gene041300.t1 MTR_5g088610 42.000 100 55 2 21 118 13 111 2.69e-18 80.9
MS.gene041300.t1 MTR_0008s0390 39.423 104 61 2 22 124 18 120 2.75e-18 79.7
MS.gene041300.t1 MTR_2g099740 40.000 95 55 2 22 115 17 110 2.78e-18 81.3
MS.gene041300.t1 MTR_3g089045 43.158 95 53 1 22 116 19 112 2.88e-18 80.1
MS.gene041300.t1 MTR_8g031360 39.796 98 52 3 22 115 18 112 3.34e-18 80.1
MS.gene041300.t1 MTR_4g125520 42.105 95 53 2 22 115 17 110 3.43e-18 80.1
MS.gene041300.t1 MTR_5g082910 38.298 94 57 1 22 115 22 114 3.44e-18 79.7
MS.gene041300.t1 MTR_4g063100 39.806 103 60 2 22 123 12 113 3.63e-18 79.3
MS.gene041300.t1 MTR_7g086960 44.000 100 55 1 22 121 92 190 4.16e-18 80.5
MS.gene041300.t1 MTR_7g110830 41.053 95 54 2 22 115 17 110 4.89e-18 80.1
MS.gene041300.t1 MTR_5g007370 38.095 105 63 2 12 115 7 110 5.03e-18 79.7
MS.gene041300.t1 MTR_4g105130 40.000 95 55 2 22 115 17 110 6.74e-18 79.7
MS.gene041300.t1 MTR_4g091490 36.800 125 74 3 22 145 18 138 7.45e-18 79.7
MS.gene041300.t1 MTR_7g096930 38.679 106 59 3 22 124 17 119 8.47e-18 78.6
MS.gene041300.t1 MTR_3g074520 39.806 103 60 2 13 114 8 109 8.80e-18 79.3
MS.gene041300.t1 MTR_2g089620 41.000 100 57 2 22 120 17 115 8.80e-18 79.3
MS.gene041300.t1 MTR_1g062940 40.860 93 53 2 22 113 11 102 9.33e-18 77.4
MS.gene041300.t1 MTR_8g020490 42.105 95 53 2 22 115 13 106 1.14e-17 77.8
MS.gene041300.t1 MTR_2g011660 40.000 100 58 2 22 120 18 116 1.40e-17 79.0
MS.gene041300.t1 MTR_2g096380 35.433 127 79 3 22 146 11 136 1.43e-17 77.4
MS.gene041300.t1 MTR_6g009430 38.776 98 58 2 22 118 17 113 1.55e-17 78.6
MS.gene041300.t1 MTR_3g028740 38.596 114 58 4 13 120 18 125 1.55e-17 78.6
MS.gene041300.t1 MTR_1g100667 38.393 112 57 4 22 127 18 123 1.70e-17 77.8
MS.gene041300.t1 MTR_1g086510 37.143 105 64 2 10 113 14 117 2.22e-17 77.4
MS.gene041300.t1 MTR_2g097910 36.641 131 61 6 22 145 25 140 2.32e-17 78.2
MS.gene041300.t1 MTR_8g017500 40.625 96 53 3 22 115 17 110 2.40e-17 78.2
MS.gene041300.t1 MTR_1g043050 34.899 149 77 6 22 153 17 162 2.58e-17 77.0
MS.gene041300.t1 MTR_0251s0050 37.963 108 65 2 22 128 18 124 2.75e-17 77.0
MS.gene041300.t1 MTR_2g089450 35.714 126 71 4 22 138 17 141 2.90e-17 76.6
MS.gene041300.t1 MTR_4g478180 38.462 104 62 2 13 115 9 111 3.15e-17 77.8
MS.gene041300.t1 MTR_5g029840 38.947 95 56 2 22 115 17 110 3.27e-17 77.8
MS.gene041300.t1 MTR_8g027345 39.175 97 53 3 22 115 17 110 3.62e-17 77.4
MS.gene041300.t1 MTR_1g110460 38.053 113 66 3 4 113 11 122 3.91e-17 77.4
MS.gene041300.t1 MTR_5g079670 40.625 96 53 3 22 115 16 109 5.32e-17 75.5
MS.gene041300.t1 MTR_7g111290 40.426 94 54 2 22 114 17 109 6.09e-17 77.4
MS.gene041300.t1 MTR_3g461490 42.105 95 53 2 21 114 16 109 7.01e-17 76.6
MS.gene041300.t1 MTR_1g100653 31.138 167 83 6 22 160 17 179 7.07e-17 76.3
MS.gene041300.t1 MTR_5g078950 40.000 95 55 2 22 115 12 105 7.61e-17 75.9
MS.gene041300.t1 MTR_8g017390 39.583 96 55 3 22 115 17 111 8.42e-17 77.4
MS.gene041300.t1 MTR_7g011170 37.931 116 67 3 22 136 17 128 9.91e-17 76.3
MS.gene041300.t1 MTR_8g098860 37.500 104 63 2 13 115 8 110 1.01e-16 76.3
MS.gene041300.t1 MTR_4g094982 37.234 94 58 1 22 115 8 100 1.04e-16 75.5
MS.gene041300.t1 MTR_4g485530 40.206 97 52 3 22 115 17 110 1.07e-16 74.3
MS.gene041300.t1 MTR_5g010020 37.500 104 63 2 13 115 8 110 1.10e-16 76.3
MS.gene041300.t1 MTR_4g102380 40.000 95 55 2 22 115 17 110 1.50e-16 75.1
MS.gene041300.t1 MTR_8g017340 40.625 96 54 3 22 115 17 111 1.52e-16 76.6
MS.gene041300.t1 MTR_7g117730 37.113 97 55 3 22 115 17 110 1.71e-16 74.7
MS.gene041300.t1 MTR_1g021230 32.653 147 89 5 22 160 62 206 1.79e-16 76.3
MS.gene041300.t1 MTR_1g008970 48.000 75 37 2 42 115 113 186 2.26e-16 74.3
MS.gene041300.t1 MTR_4g082290 35.659 129 78 3 22 149 17 141 2.26e-16 75.9
MS.gene041300.t1 MTR_4g121460 40.594 101 54 3 21 118 16 113 2.31e-16 75.5
MS.gene041300.t1 MTR_7g017260 41.237 97 53 2 22 115 30 125 2.96e-16 74.3
MS.gene041300.t1 MTR_2g034790 41.584 101 53 3 21 118 16 113 2.97e-16 75.1
MS.gene041300.t1 MTR_8g017350 39.583 96 55 3 22 115 17 111 3.06e-16 75.9
MS.gene041300.t1 MTR_1g086530 38.710 93 55 2 22 113 38 129 3.49e-16 74.3
MS.gene041300.t1 MTR_5g079290 40.404 99 55 3 22 118 22 118 3.75e-16 73.9
MS.gene041300.t1 MTR_4g082230 34.884 129 79 3 22 149 17 141 4.71e-16 75.1
MS.gene041300.t1 MTR_7g035075 39.785 93 54 2 22 113 19 110 5.11e-16 72.8
MS.gene041300.t1 MTR_3g097450 39.394 99 50 4 22 115 17 110 5.46e-16 73.9
MS.gene041300.t1 MTR_7g010210 35.965 114 71 2 22 134 17 129 5.48e-16 73.6
MS.gene041300.t1 MTR_5g078910 40.404 99 55 3 22 118 12 108 6.34e-16 73.9
MS.gene041300.t1 MTR_6g027370 41.053 95 55 1 22 116 102 195 6.74e-16 74.3
MS.gene041300.t1 MTR_4g073420 38.384 99 51 4 22 115 17 110 6.92e-16 73.6
MS.gene041300.t1 MTR_3g083540 40.206 97 52 3 22 115 46 139 7.13e-16 73.6
MS.gene041300.t1 MTR_7g010210 35.965 114 71 2 22 134 17 129 7.45e-16 73.9
MS.gene041300.t1 MTR_8g006470 40.404 99 56 3 22 118 15 112 7.51e-16 73.6
MS.gene041300.t1 MTR_5g078140 41.237 97 51 3 22 115 17 110 8.26e-16 73.6
MS.gene041300.t1 MTR_6g006030 34.746 118 70 3 22 133 19 135 8.39e-16 72.0
MS.gene041300.t1 MTR_3g065440 41.237 97 51 3 22 115 17 110 8.69e-16 73.6
MS.gene041300.t1 MTR_1g076150 33.858 127 78 3 22 145 17 140 8.85e-16 72.8
MS.gene041300.t1 MTR_0001s0360 38.947 95 56 2 22 115 12 105 9.99e-16 72.8
MS.gene041300.t1 MTR_0247s0040 42.424 99 53 3 22 118 12 108 1.05e-15 71.2
MS.gene041300.t1 MTR_6g090405 36.607 112 68 3 52 161 49 159 1.18e-15 72.4
MS.gene041300.t1 MTR_3g052450 37.895 95 57 2 22 115 45 138 1.52e-15 73.6
MS.gene041300.t1 MTR_8g095390 37.374 99 50 4 22 114 17 109 1.63e-15 72.8
MS.gene041300.t1 MTR_5g078800 40.625 96 53 3 22 115 12 105 2.03e-15 72.0
MS.gene041300.t1 MTR_4g029540 40.196 102 55 4 19 115 9 109 2.97e-15 72.0
MS.gene041300.t1 MTR_5g062790 37.000 100 58 2 22 118 14 111 3.51e-15 72.0
MS.gene041300.t1 MTR_7g087130 38.947 95 56 2 22 115 17 110 3.86e-15 72.0
MS.gene041300.t1 MTR_5g079220 40.404 99 55 3 22 118 26 122 3.95e-15 71.2
MS.gene041300.t1 MTR_3g052430 38.542 96 55 3 22 115 46 139 4.16e-15 72.4
MS.gene041300.t1 MTR_0140s0030 34.783 115 73 2 22 135 18 131 4.37e-15 71.6
MS.gene041300.t1 MTR_0489s0020 34.783 115 73 2 22 135 18 131 4.37e-15 71.6
MS.gene041300.t1 MTR_3g039990 36.937 111 68 2 22 131 18 127 4.53e-15 71.6
MS.gene041300.t1 MTR_7g111290 47.619 63 32 1 52 114 6 67 5.37e-15 71.6
MS.gene041300.t1 MTR_6g012180 38.947 95 56 2 22 115 17 110 6.11e-15 71.2
MS.gene041300.t1 MTR_0008s0280 33.333 114 74 2 22 134 17 129 6.50e-15 70.1
MS.gene041300.t1 MTR_6g055910 30.952 126 80 3 22 146 19 138 7.02e-15 70.9
MS.gene041300.t1 MTR_5g078860 39.583 96 54 3 22 115 12 105 7.20e-15 70.9
MS.gene041300.t1 MTR_8g060940 37.895 95 57 2 22 115 12 105 8.14e-15 70.1
MS.gene041300.t1 MTR_5g016510 36.842 95 57 2 22 115 8 100 8.55e-15 70.9
MS.gene041300.t1 MTR_5g078930 40.625 96 53 3 22 115 14 107 8.77e-15 69.7
MS.gene041300.t1 MTR_0063s0090 31.092 119 75 4 22 136 17 132 9.54e-15 69.7
MS.gene041300.t1 MTR_0193s0090 40.909 110 58 4 22 126 12 119 1.72e-14 68.6
MS.gene041300.t1 MTR_2g067420 38.947 95 56 2 22 115 19 112 1.80e-14 70.1
MS.gene041300.t1 MTR_3g011610 34.000 100 64 2 22 120 42 140 2.01e-14 70.5
MS.gene041300.t1 MTR_6g055910 33.684 95 57 2 52 146 21 109 2.25e-14 68.9
MS.gene041300.t1 MTR_1g043080 37.755 98 53 3 22 115 17 110 2.37e-14 68.9
MS.gene041300.t1 MTR_4g063100 39.773 88 46 3 36 123 4 84 3.12e-14 68.2
MS.gene041300.t1 MTR_5g088640 35.000 100 60 2 22 118 17 114 4.94e-14 68.6
MS.gene041300.t1 MTR_5g088080 35.000 100 60 2 22 118 17 114 6.58e-14 67.8
MS.gene041300.t1 MTR_5g088150 35.000 100 60 2 22 118 17 114 6.58e-14 67.8
MS.gene041300.t1 MTR_5g488210 35.000 100 60 2 22 118 17 114 6.58e-14 67.8
MS.gene041300.t1 MTR_6g012690 36.207 116 69 3 22 136 17 128 7.58e-14 68.6
MS.gene041300.t1 MTR_1g017000 45.312 64 34 1 52 115 49 111 1.00e-13 67.4
MS.gene041300.t1 MTR_5g488170 35.000 100 60 2 22 118 17 114 1.00e-13 67.0
MS.gene041300.t1 MTR_4g128190 35.714 98 51 2 21 118 15 100 1.18e-13 67.0
MS.gene041300.t1 MTR_5g079120 38.542 96 55 3 22 115 66 159 1.41e-13 67.4
MS.gene041300.t1 MTR_5g042030 36.170 94 58 2 22 114 12 104 1.59e-13 67.0
MS.gene041300.t1 MTR_8g042410 36.190 105 60 4 22 122 42 143 1.85e-13 67.8
MS.gene041300.t1 MTR_2g096380 42.105 76 41 2 45 118 14 88 3.84e-13 65.1
MS.gene041300.t1 MTR_4g097570 38.384 99 51 5 22 114 17 111 4.99e-13 65.9
MS.gene041300.t1 MTR_5g014990 46.154 65 32 2 52 115 49 111 5.27e-13 65.9
MS.gene041300.t1 MTR_6g015455 34.409 93 60 1 22 114 8 99 6.43e-13 66.2
MS.gene041300.t1 MTR_4g128670 37.374 99 53 5 22 115 17 111 6.91e-13 65.9
MS.gene041300.t1 MTR_1g017140 31.646 158 83 7 22 158 17 170 8.71e-13 65.5
MS.gene041300.t1 MTR_4g057635 46.154 65 32 2 52 115 49 111 1.05e-12 65.1
MS.gene041300.t1 MTR_3g103570 44.615 65 33 2 52 115 49 111 1.12e-12 65.1
MS.gene041300.t1 MTR_7g061550 34.375 96 59 2 21 113 9 103 1.70e-12 64.7
MS.gene041300.t1 MTR_4g097570 39.394 99 49 4 22 114 17 110 1.75e-12 64.3
MS.gene041300.t1 MTR_1g083630 27.742 155 95 4 22 163 17 167 2.00e-12 64.7
MS.gene041300.t1 MTR_6g080360 32.609 92 60 1 22 113 482 571 2.24e-12 64.7
MS.gene041300.t1 MTR_6g080360 32.609 92 60 1 22 113 262 351 2.74e-12 64.3
MS.gene041300.t1 MTR_2g095520 43.750 64 35 1 52 115 49 111 4.05e-12 63.5
MS.gene041300.t1 MTR_7g109320 40.816 98 52 3 21 115 16 110 1.17e-11 62.4
MS.gene041300.t1 MTR_2g088170 38.235 102 57 3 22 120 34 132 1.80e-11 62.0
MS.gene041300.t1 MTR_7g102110 43.750 64 35 1 52 115 49 111 3.79e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041300.t1 AT4G18770 57.282 103 43 1 21 123 219 320 8.46e-37 132
MS.gene041300.t1 AT3G27785 49.515 103 51 1 21 123 191 292 1.37e-32 120
MS.gene041300.t1 AT5G58850 49.123 114 57 1 21 134 107 219 2.44e-32 120
MS.gene041300.t1 AT5G40360 54.082 98 44 1 21 118 160 256 1.62e-31 116
MS.gene041300.t1 AT5G11050 44.538 119 65 1 21 139 107 224 3.31e-30 114
MS.gene041300.t1 AT2G25230 43.636 110 60 2 20 128 27 135 1.33e-27 103
MS.gene041300.t1 AT5G40430 42.202 109 60 3 21 128 56 162 4.79e-26 100
MS.gene041300.t1 AT5G11510 44.000 100 53 2 18 115 78 176 4.90e-24 98.2
MS.gene041300.t1 AT5G11510 44.000 100 53 2 18 115 78 176 4.90e-24 98.2
MS.gene041300.t1 AT5G11510 44.000 100 53 2 18 115 78 176 4.90e-24 98.2
MS.gene041300.t1 AT5G11510 44.000 100 53 2 18 115 78 176 4.91e-24 98.2
MS.gene041300.t1 AT5G11510 44.000 100 53 2 18 115 78 176 5.22e-24 98.2
MS.gene041300.t1 AT3G09370 47.872 94 48 1 22 115 138 230 6.85e-24 97.4
MS.gene041300.t1 AT3G09370 30.702 114 79 0 1 114 65 178 4.06e-14 69.7
MS.gene041300.t1 AT3G09370 47.872 94 48 1 22 115 133 225 7.51e-24 97.4
MS.gene041300.t1 AT3G09370 30.702 114 79 0 1 114 60 173 4.41e-14 69.3
MS.gene041300.t1 AT3G09370 47.872 94 48 1 22 115 146 238 8.88e-24 97.4
MS.gene041300.t1 AT3G09370 30.702 114 79 0 1 114 73 186 2.78e-14 70.1
MS.gene041300.t1 AT5G02320 46.809 94 49 1 22 115 70 162 1.40e-23 96.7
MS.gene041300.t1 AT5G02320 35.484 93 60 0 22 114 18 110 3.30e-14 69.7
MS.gene041300.t1 AT5G02320 46.809 94 49 1 22 115 130 222 1.56e-23 96.7
MS.gene041300.t1 AT5G02320 35.484 93 60 0 22 114 78 170 3.48e-14 69.7
MS.gene041300.t1 AT5G02320 46.809 94 49 1 22 115 130 222 1.56e-23 96.7
MS.gene041300.t1 AT5G02320 35.484 93 60 0 22 114 78 170 3.48e-14 69.7
MS.gene041300.t1 AT4G00540 48.454 97 46 2 22 115 106 201 5.06e-23 94.4
MS.gene041300.t1 AT4G00540 31.897 116 71 2 7 114 34 149 8.45e-13 65.9
MS.gene041300.t1 AT4G00540 48.454 97 46 2 22 115 104 199 8.29e-23 94.0
MS.gene041300.t1 AT4G00540 35.644 101 57 2 22 114 47 147 1.11e-12 65.5
MS.gene041300.t1 AT2G02820 40.496 121 70 2 11 131 22 140 2.28e-22 91.7
MS.gene041300.t1 AT4G32730 43.000 100 54 2 18 115 84 182 4.17e-22 92.8
MS.gene041300.t1 AT4G32730 43.000 100 54 2 18 115 84 182 4.71e-22 92.4
MS.gene041300.t1 AT4G32730 43.000 100 54 2 18 115 84 182 4.71e-22 92.4
MS.gene041300.t1 AT4G32730 43.000 100 54 2 18 115 84 182 4.71e-22 92.4
MS.gene041300.t1 AT4G32730 43.000 100 54 2 18 115 84 182 4.71e-22 92.4
MS.gene041300.t1 AT4G33450 39.200 125 75 1 11 135 11 134 5.05e-22 89.4
MS.gene041300.t1 AT2G02820 40.496 121 70 2 11 131 22 140 6.40e-22 91.7
MS.gene041300.t1 AT2G02820 40.496 121 70 2 11 131 22 140 6.57e-22 91.7
MS.gene041300.t1 AT5G14750 43.636 110 56 4 10 115 7 114 6.75e-22 88.2
MS.gene041300.t1 AT1G14350 41.880 117 66 2 11 127 17 131 7.96e-22 91.3
MS.gene041300.t1 AT1G14350 41.880 117 66 2 11 127 17 131 7.96e-22 91.3
MS.gene041300.t1 AT3G55730 38.525 122 66 2 22 135 59 179 1.49e-20 87.4
MS.gene041300.t1 AT3G28470 42.105 95 53 2 22 115 17 110 1.80e-20 86.7
MS.gene041300.t1 AT1G17950 36.364 132 80 2 22 150 8 138 2.95e-20 84.7
MS.gene041300.t1 AT1G69560 38.053 113 69 1 4 116 92 203 3.25e-20 85.9
MS.gene041300.t1 AT1G69560 38.053 113 69 1 4 116 108 219 3.33e-20 86.3
MS.gene041300.t1 AT3G29020 41.053 95 55 1 22 116 68 161 6.93e-20 83.6
MS.gene041300.t1 AT2G39880 39.130 115 67 2 10 122 39 152 1.04e-19 85.1
MS.gene041300.t1 AT3G13890 38.053 113 59 2 13 115 8 119 1.63e-19 84.3
MS.gene041300.t1 AT3G29020 41.053 95 55 1 22 116 70 163 1.84e-19 83.6
MS.gene041300.t1 AT5G40330 43.689 103 52 4 17 115 10 110 2.82e-19 81.6
MS.gene041300.t1 AT4G28110 43.000 100 55 2 22 120 17 115 4.64e-19 82.0
MS.gene041300.t1 AT1G26780 42.105 95 54 1 22 116 101 194 5.07e-19 82.0
MS.gene041300.t1 AT3G27920 42.708 96 51 3 22 115 19 112 6.42e-19 80.9
MS.gene041300.t1 AT1G26780 42.105 95 54 1 22 116 101 194 8.03e-19 82.4
MS.gene041300.t1 AT3G24310 45.161 93 49 2 22 113 23 114 8.43e-19 81.3
MS.gene041300.t1 AT3G13890 38.462 104 62 2 13 115 8 110 1.47e-18 81.6
MS.gene041300.t1 AT5G17800 35.507 138 78 3 22 154 96 227 1.53e-18 81.3
MS.gene041300.t1 AT1G09540 42.105 95 53 2 22 115 17 110 1.63e-18 81.6
MS.gene041300.t1 AT4G13480 44.086 93 50 2 22 113 11 102 2.16e-18 80.1
MS.gene041300.t1 AT5G26660 41.053 95 54 2 22 115 17 110 2.49e-18 80.9
MS.gene041300.t1 AT2G26950 41.176 102 55 4 21 120 20 118 2.52e-18 81.3
MS.gene041300.t1 AT1G57560 32.692 156 92 5 22 169 17 167 2.88e-18 80.5
MS.gene041300.t1 AT1G73410 43.158 95 53 1 22 116 9 102 2.91e-18 79.3
MS.gene041300.t1 AT3G12720 38.947 95 56 2 22 115 27 120 3.18e-18 80.1
MS.gene041300.t1 AT3G09230 35.965 114 70 2 9 120 43 155 3.22e-18 80.9
MS.gene041300.t1 AT1G73410 43.158 95 53 1 22 116 9 102 3.42e-18 78.6
MS.gene041300.t1 AT3G61250 40.625 96 51 3 22 114 17 109 3.43e-18 80.1
MS.gene041300.t1 AT1G57560 42.708 96 51 3 22 115 17 110 5.33e-18 79.3
MS.gene041300.t1 AT5G12870 39.000 100 59 2 22 120 23 121 5.39e-18 79.3
MS.gene041300.t1 AT4G01680 41.053 95 54 2 22 115 17 110 5.66e-18 78.6
MS.gene041300.t1 AT4G05100 40.000 100 58 2 22 120 18 116 5.87e-18 79.7
MS.gene041300.t1 AT3G08500 37.719 114 65 3 10 120 23 133 5.91e-18 80.1
MS.gene041300.t1 AT5G35550 37.607 117 71 2 22 137 19 134 7.31e-18 78.6
MS.gene041300.t1 AT4G01680 41.053 95 54 2 22 115 17 110 8.45e-18 79.3
MS.gene041300.t1 AT3G30210 44.086 93 50 2 22 113 32 123 9.11e-18 78.6
MS.gene041300.t1 AT4G21440 36.000 125 75 3 22 145 17 137 1.24e-17 79.0
MS.gene041300.t1 AT2G31180 38.462 117 62 4 22 132 17 129 1.35e-17 77.8
MS.gene041300.t1 AT4G01680 39.252 107 51 3 22 115 17 122 1.69e-17 78.6
MS.gene041300.t1 AT3G48920 42.105 95 53 2 22 115 23 116 2.79e-17 77.0
MS.gene041300.t1 AT4G12350 41.053 95 54 2 22 115 17 110 2.92e-17 77.4
MS.gene041300.t1 AT1G74430 41.121 107 57 3 22 125 17 120 3.05e-17 77.0
MS.gene041300.t1 AT3G50060 36.036 111 68 2 22 131 9 117 3.39e-17 77.4
MS.gene041300.t1 AT5G52600 41.509 106 57 3 14 115 6 110 3.49e-17 75.9
MS.gene041300.t1 AT3G53200 37.736 106 62 3 22 125 14 117 4.05e-17 76.3
MS.gene041300.t1 AT2G47190 41.935 93 52 2 22 113 25 116 4.86e-17 76.6
MS.gene041300.t1 AT1G63910 38.462 104 62 2 13 115 8 110 5.21e-17 77.4
MS.gene041300.t1 AT5G62470 34.109 129 81 2 22 150 17 141 7.68e-17 77.0
MS.gene041300.t1 AT3G27810 33.600 125 81 2 22 145 25 148 8.63e-17 75.1
MS.gene041300.t1 AT3G46130 37.736 106 64 2 14 118 6 110 1.36e-16 75.1
MS.gene041300.t1 AT1G66380 43.750 96 50 3 22 115 13 106 1.73e-16 72.4
MS.gene041300.t1 AT1G06180 39.175 97 53 3 22 115 17 110 1.75e-16 74.7
MS.gene041300.t1 AT1G34670 35.000 120 73 3 22 140 17 132 1.91e-16 75.9
MS.gene041300.t1 AT3G13540 40.206 97 52 3 22 115 28 121 1.96e-16 74.7
MS.gene041300.t1 AT5G26660 48.438 64 32 1 52 115 17 79 2.00e-16 75.5
MS.gene041300.t1 AT5G56110 41.053 95 54 2 21 114 16 109 2.47e-16 75.1
MS.gene041300.t1 AT5G65230 41.053 95 54 2 22 115 17 110 2.52e-16 75.1
MS.gene041300.t1 AT2G32460 30.822 146 89 5 22 164 23 159 2.83e-16 75.9
MS.gene041300.t1 AT4G09460 39.394 99 50 4 22 115 17 110 2.87e-16 73.9
MS.gene041300.t1 AT2G32460 30.822 146 89 5 22 164 11 147 2.87e-16 75.9
MS.gene041300.t1 AT5G54230 35.200 125 76 3 22 145 17 137 2.88e-16 75.1
MS.gene041300.t1 AT5G59780 37.755 98 59 2 22 118 13 109 3.51e-16 73.6
MS.gene041300.t1 AT5G10280 41.053 95 54 2 22 115 17 110 3.59e-16 74.7
MS.gene041300.t1 AT1G66370 40.625 96 53 3 22 115 13 106 3.90e-16 73.6
MS.gene041300.t1 AT4G22680 40.000 95 55 2 22 115 17 110 4.24e-16 73.9
MS.gene041300.t1 AT5G06100 38.679 106 56 4 22 122 37 138 4.38e-16 75.1
MS.gene041300.t1 AT5G06100 38.679 106 56 4 22 122 37 138 4.38e-16 75.1
MS.gene041300.t1 AT5G06100 38.679 106 56 4 22 122 37 138 4.38e-16 75.1
MS.gene041300.t1 AT5G06100 38.679 106 56 4 22 122 37 138 4.38e-16 75.1
MS.gene041300.t1 AT5G06100 38.679 106 56 4 22 122 37 138 4.46e-16 75.1
MS.gene041300.t1 AT3G60460 40.000 110 60 4 14 118 5 113 4.95e-16 74.3
MS.gene041300.t1 AT3G11440 35.922 103 63 3 22 122 46 147 5.17e-16 75.1
MS.gene041300.t1 AT1G68320 39.785 93 54 2 22 113 24 115 5.35e-16 73.9
MS.gene041300.t1 AT3G23250 39.175 97 53 3 22 115 17 110 5.63e-16 73.9
MS.gene041300.t1 AT3G11440 35.922 103 63 3 22 122 46 147 7.35e-16 74.7
MS.gene041300.t1 AT3G11440 35.922 103 63 3 22 122 46 147 7.35e-16 74.7
MS.gene041300.t1 AT3G11440 35.922 103 63 3 22 122 46 147 7.35e-16 74.7
MS.gene041300.t1 AT1G22640 31.818 154 93 6 22 166 17 167 7.77e-16 73.2
MS.gene041300.t1 AT5G67300 40.000 95 54 2 22 115 9 101 8.40e-16 73.6
MS.gene041300.t1 AT1G66230 41.667 96 52 3 22 115 17 110 8.97e-16 73.2
MS.gene041300.t1 AT5G35550 40.698 86 50 1 52 137 53 137 9.14e-16 72.8
MS.gene041300.t1 AT5G16770 37.755 98 59 2 22 118 17 113 9.15e-16 73.6
MS.gene041300.t1 AT5G16770 37.755 98 59 2 22 118 17 113 9.15e-16 73.6
MS.gene041300.t1 AT5G39700 37.895 95 58 1 22 116 59 152 9.84e-16 71.6
MS.gene041300.t1 AT2G23290 37.895 95 56 2 22 115 16 108 1.07e-15 73.2
MS.gene041300.t1 AT1G48000 39.785 93 54 2 22 113 37 128 1.20e-15 72.4
MS.gene041300.t1 AT3G47600 40.000 95 55 2 22 115 17 110 1.26e-15 73.6
MS.gene041300.t1 AT5G40350 39.785 93 54 2 22 113 22 113 1.33e-15 71.6
MS.gene041300.t1 AT5G16770 37.755 98 59 2 22 118 17 113 1.34e-15 73.2
MS.gene041300.t1 AT5G16770 37.755 98 59 2 22 118 17 113 1.34e-15 73.2
MS.gene041300.t1 AT3G01530 37.273 110 65 4 22 128 30 138 1.41e-15 71.6
MS.gene041300.t1 AT2G16720 38.384 99 51 4 22 115 17 110 1.45e-15 72.4
MS.gene041300.t1 AT5G14340 41.667 96 52 3 22 115 29 122 1.47e-15 72.8
MS.gene041300.t1 AT4G38620 38.384 99 51 4 22 115 17 110 1.53e-15 72.8
MS.gene041300.t1 AT1G35515 37.895 95 57 2 22 115 17 110 1.71e-15 71.2
MS.gene041300.t1 AT3G02940 36.538 104 64 2 13 115 8 110 1.80e-15 72.8
MS.gene041300.t1 AT5G14750 46.875 64 33 1 52 115 18 80 1.91e-15 70.5
MS.gene041300.t1 AT1G25340 40.217 92 50 2 22 113 23 109 1.94e-15 72.4
MS.gene041300.t1 AT4G37260 37.895 95 56 2 22 115 16 108 2.13e-15 72.8
MS.gene041300.t1 AT3G02940 36.538 104 64 2 13 115 8 110 2.44e-15 72.4
MS.gene041300.t1 AT3G02940 36.538 104 64 2 13 115 8 110 2.44e-15 72.4
MS.gene041300.t1 AT1G25340 40.217 92 50 2 22 113 23 109 2.65e-15 72.4
MS.gene041300.t1 AT5G62470 33.846 130 81 3 22 150 17 142 2.68e-15 72.4
MS.gene041300.t1 AT2G26960 36.111 108 65 3 11 115 12 118 2.88e-15 72.8
MS.gene041300.t1 AT1G08810 35.965 114 71 2 22 134 17 129 5.33e-15 71.2
MS.gene041300.t1 AT1G25340 39.785 93 54 2 22 113 23 114 6.01e-15 70.9
MS.gene041300.t1 AT4G34990 36.842 95 58 2 22 115 17 110 6.21e-15 70.9
MS.gene041300.t1 AT5G49330 39.796 98 53 3 21 115 16 110 7.04e-15 71.2
MS.gene041300.t1 AT4G17785 33.613 119 74 3 22 139 18 132 7.15e-15 71.2
MS.gene041300.t1 AT1G74080 41.053 95 54 2 22 115 17 110 9.11e-15 70.9
MS.gene041300.t1 AT4G17785 33.613 119 74 3 22 139 18 132 9.23e-15 71.2
MS.gene041300.t1 AT3G53200 43.243 74 41 1 52 125 12 84 1.06e-14 69.3
MS.gene041300.t1 AT1G56160 37.255 102 58 3 22 120 19 117 1.18e-14 70.5
MS.gene041300.t1 AT1G74650 38.947 95 56 2 22 115 17 110 1.59e-14 70.1
MS.gene041300.t1 AT5G16600 39.175 97 53 3 22 115 17 110 2.97e-14 69.3
MS.gene041300.t1 AT3G28910 39.362 94 55 2 22 114 17 109 3.08e-14 69.3
MS.gene041300.t1 AT1G18570 40.000 95 55 2 22 115 18 111 3.52e-14 69.3
MS.gene041300.t1 AT5G15310 35.345 116 70 3 22 136 17 128 3.73e-14 68.6
MS.gene041300.t1 AT5G15310 35.345 116 70 3 22 136 17 128 4.11e-14 68.9
MS.gene041300.t1 AT5G15310 35.345 116 70 3 22 136 17 128 4.34e-14 68.9
MS.gene041300.t1 AT1G56650 40.000 95 55 2 22 115 13 106 4.77e-14 68.2
MS.gene041300.t1 AT5G07690 41.053 95 54 2 22 115 17 110 5.47e-14 68.9
MS.gene041300.t1 AT3G01140 38.298 94 56 2 22 114 60 152 6.02e-14 68.9
MS.gene041300.t1 AT1G79180 34.746 118 69 4 22 136 19 131 6.08e-14 68.6
MS.gene041300.t1 AT1G16490 35.870 92 58 1 55 146 53 143 6.86e-14 68.2
MS.gene041300.t1 AT3G01140 37.000 100 61 2 22 120 17 115 6.87e-14 68.6
MS.gene041300.t1 AT3G27810 34.043 94 61 1 52 145 7 99 7.86e-14 66.2
MS.gene041300.t1 AT2G47460 38.542 96 57 2 21 115 16 110 1.00e-13 68.2
MS.gene041300.t1 AT4G25560 33.636 110 71 2 22 130 15 123 1.51e-13 67.0
MS.gene041300.t1 AT1G18710 35.000 100 63 2 22 120 17 115 1.72e-13 67.0
MS.gene041300.t1 AT1G66390 41.053 95 54 2 22 115 13 106 1.75e-13 66.6
MS.gene041300.t1 AT3G62610 37.500 96 58 2 21 115 16 110 2.02e-13 67.4
MS.gene041300.t1 AT5G07700 41.053 95 54 2 22 115 17 110 2.18e-13 67.0
MS.gene041300.t1 AT5G07700 41.053 95 54 2 22 115 17 110 2.18e-13 67.0
MS.gene041300.t1 AT4G26930 34.375 96 59 3 22 115 24 117 2.21e-13 67.4
MS.gene041300.t1 AT3G12820 43.056 72 40 1 52 123 2 72 2.28e-13 65.5
MS.gene041300.t1 AT5G61420 32.653 147 84 4 22 154 17 162 2.34e-13 67.0
MS.gene041300.t1 AT3G49690 45.312 64 34 1 52 115 49 111 2.52e-13 66.6
MS.gene041300.t1 AT5G57620 48.387 62 29 2 55 115 52 111 2.57e-13 67.0
MS.gene041300.t1 AT5G23000 37.736 106 49 4 22 118 17 114 3.89e-13 66.2
MS.gene041300.t1 AT5G55020 36.170 94 58 2 22 114 31 123 4.90e-13 66.6
MS.gene041300.t1 AT5G60890 38.298 94 56 2 22 114 17 109 6.04e-13 65.5
MS.gene041300.t1 AT5G52260 37.624 101 59 3 22 120 17 115 7.32e-13 65.1
MS.gene041300.t1 AT3G12820 43.056 72 40 1 52 123 50 120 7.33e-13 64.7
MS.gene041300.t1 AT1G71030 43.548 62 34 1 52 113 2 62 7.42e-13 63.9
MS.gene041300.t1 AT3G47600 45.312 64 34 1 52 115 42 104 7.44e-13 65.5
MS.gene041300.t1 AT4G37780 35.714 98 56 4 22 115 17 111 7.92e-13 65.5
MS.gene041300.t1 AT1G71030 45.000 60 32 1 54 113 18 76 1.02e-12 63.5
MS.gene041300.t1 AT5G65790 46.154 65 32 2 52 115 49 111 1.05e-12 65.5
MS.gene041300.t1 AT1G14350 39.130 92 41 3 36 127 12 88 1.95e-12 64.7
MS.gene041300.t1 AT1G14350 39.130 92 41 3 36 127 12 88 1.95e-12 64.7
MS.gene041300.t1 AT5G40350 43.548 62 34 1 52 113 8 68 2.01e-12 62.4
MS.gene041300.t1 AT1G79180 40.244 82 46 2 55 136 86 164 2.02e-12 64.3
MS.gene041300.t1 AT5G62320 42.188 64 36 1 52 115 56 118 2.15e-12 63.5
MS.gene041300.t1 AT2G37630 34.343 99 61 2 18 113 3 100 3.91e-12 63.5
MS.gene041300.t1 AT5G59780 41.791 67 38 1 52 118 23 88 5.29e-12 62.0
MS.gene041300.t1 AT3G18100 33.628 113 71 2 4 113 429 540 5.84e-12 63.5
MS.gene041300.t1 AT3G18100 33.628 113 71 2 4 113 264 375 5.94e-12 63.5
MS.gene041300.t1 AT3G18100 33.628 113 71 2 4 113 316 427 6.09e-12 63.5
MS.gene041300.t1 AT3G18100 33.628 113 71 2 4 113 477 588 6.43e-12 63.5
MS.gene041300.t1 AT3G46130 41.791 67 38 1 52 118 13 78 7.58e-12 62.0
MS.gene041300.t1 AT3G46130 41.791 67 38 1 52 118 23 88 7.73e-12 62.0
MS.gene041300.t1 AT5G14750 47.170 53 27 1 63 115 2 53 5.18e-11 58.2
MS.gene041300.t1 AT5G14750 47.170 53 27 1 63 115 2 53 5.18e-11 58.2
MS.gene041300.t1 AT1G66380 46.875 64 33 1 52 115 11 73 5.58e-11 57.0
MS.gene041300.t1 AT5G49620 38.710 93 55 2 22 113 31 122 8.21e-11 59.7

Find 35 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTCGTTTAGGAACCTTTA+AGG 0.215538 7.2:-67069647 None:intergenic
CGTGTTCATTGAGTTGTTCT+TGG 0.251185 7.2:+67069784 None:intergenic
AATATGTAGTTGGGAATAAT+TGG 0.272529 7.2:-67069889 MS.gene041300:CDS
GAAATTGCTAAGAGATTTCC+TGG 0.321194 7.2:-67069863 MS.gene041300:CDS
TTGAGTTGTTCTTGGCATTC+CGG 0.325493 7.2:+67069792 None:intergenic
CTATCTTCGACCAGATATTA+AGG 0.329716 7.2:-67070764 MS.gene041300:intron
AAGATAGGCACCTTAATATC+TGG 0.386677 7.2:+67070754 None:intergenic
ATTTCATGAAGAAGTCGTTT+AGG 0.390032 7.2:-67069658 MS.gene041300:CDS
GAACTTCAGAAATATGTAGT+TGG 0.409724 7.2:-67069899 MS.gene041300:CDS
TCATCACTAATATTAACATT+TGG 0.410601 7.2:+67069743 None:intergenic
CATATTGCTACCTTTCTAGA+TGG 0.420484 7.2:-67070823 MS.gene041300:CDS
AACTTCAGAAATATGTAGTT+GGG 0.431730 7.2:-67069898 MS.gene041300:CDS
TTCAGAGTGTGATTATGAAA+TGG 0.434618 7.2:-67069717 MS.gene041300:CDS
TTCACTCTTGCCATCTAGAA+AGG 0.456391 7.2:+67070813 None:intergenic
GGAATGCCATTGAGCGTGTC+CGG 0.456600 7.2:-67069811 MS.gene041300:CDS
GTCTGCAAGCTTGTAATAAG+AGG 0.457834 7.2:+67071074 None:intergenic
TAGCATTCTTCTGGAATCTG+TGG 0.461377 7.2:-67070872 MS.gene041300:CDS
CAAAGAACGAATATGTCAAA+TGG 0.473458 7.2:-67071041 MS.gene041300:CDS
AGCATTCTTCTGGAATCTGT+GGG 0.475646 7.2:-67070871 MS.gene041300:CDS
CACTAATATTAACATTTGGT+TGG 0.486948 7.2:+67069747 None:intergenic
AGAGTTCAGTTAAGAACCAT+TGG 0.497650 7.2:-67069832 MS.gene041300:CDS
TGTCAAATGGACCGCGGAAG+AGG 0.506887 7.2:-67071028 MS.gene041300:CDS
GGCATTCCGGACACGCTCAA+TGG 0.510370 7.2:+67069805 None:intergenic
CAAGCTTGTAATAAGAGGTC+GGG 0.513583 7.2:+67071079 None:intergenic
GTAATAAGAGGTCGGGTACA+TGG 0.518512 7.2:+67071086 None:intergenic
AATGGACCGCGGAAGAGGAT+AGG 0.542446 7.2:-67071023 MS.gene041300:intron
GTTGCTTTGAGCTTAAAGAA+TGG 0.554111 7.2:-67070849 MS.gene041300:CDS
GCAAGCTTGTAATAAGAGGT+CGG 0.568760 7.2:+67071078 None:intergenic
CACGCTCAATGGCATTCCAA+TGG 0.603862 7.2:+67069816 None:intergenic
ACTGAACTCTCAGTACGCCC+AGG 0.623984 7.2:+67069845 None:intergenic
GATATACCTATCCTCTTCCG+CGG 0.644396 7.2:+67071017 None:intergenic
CAAGAACAACTCAATGAACA+CGG 0.646667 7.2:-67069783 MS.gene041300:CDS
TATGCTTGCAGGATGAACCA+TGG 0.685451 7.2:-67069949 MS.gene041300:intron
AAATTGCTAAGAGATTTCCT+GGG 0.699144 7.2:-67069862 MS.gene041300:CDS
CGAATATGTCAAATGGACCG+CGG 0.731875 7.2:-67071034 MS.gene041300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTACATAGATTTATTA+AGG - chr7.2:67070561-67070580 MS.gene041300:intron 10.0%
!! AATTTACATAGATTTATTAA+GGG - chr7.2:67070562-67070581 MS.gene041300:intron 10.0%
!!! ATTTATAATTATCCATTTTA+TGG - chr7.2:67070304-67070323 MS.gene041300:intron 10.0%
!! AAAGCAATAAAAAAAATTAG+GGG - chr7.2:67070072-67070091 MS.gene041300:intron 15.0%
!! ACTAAAAAAATTGAAAAGAT+AGG + chr7.2:67069997-67070016 None:intergenic 15.0%
!! ATGATAACAAAAAAAACTTA+TGG - chr7.2:67070406-67070425 MS.gene041300:intron 15.0%
!! ATTTAAATATTGTACATGAA+TGG - chr7.2:67070687-67070706 MS.gene041300:intron 15.0%
!! CAAAGCAATAAAAAAAATTA+GGG - chr7.2:67070071-67070090 MS.gene041300:intron 15.0%
!! TCAAAGCAATAAAAAAAATT+AGG - chr7.2:67070070-67070089 MS.gene041300:intron 15.0%
!!! AATGTTTTCATATTTTTGTA+TGG - chr7.2:67069773-67069792 MS.gene041300:CDS 15.0%
!!! TTTTTTTGTTATCATGTTAT+CGG + chr7.2:67070401-67070420 None:intergenic 15.0%
!! TCATCACTAATATTAACATT+TGG + chr7.2:67070993-67071012 None:intergenic 20.0%
!!! ATAATTTTTTAGCATTCTTC+TGG - chr7.2:67069852-67069871 MS.gene041300:CDS 20.0%
!!! ATTCCATTTATGCTTTTAAT+TGG + chr7.2:67070104-67070123 None:intergenic 20.0%
!!! CAAAAATGAATTTTATTGAG+TGG - chr7.2:67070334-67070353 MS.gene041300:intron 20.0%
!!! CACTCAATAAAATTCATTTT+TGG + chr7.2:67070336-67070355 None:intergenic 20.0%
!!! GGTTTTATTATATACACTAT+TGG - chr7.2:67069794-67069813 MS.gene041300:CDS 20.0%
! AAATGGAATTAAATCATCCA+TGG - chr7.2:67070115-67070134 MS.gene041300:intron 25.0%
! AACTTCAGAAATATGTAGTT+GGG - chr7.2:67070835-67070854 MS.gene041300:CDS 25.0%
! AATATGTAGTTGGGAATAAT+TGG - chr7.2:67070844-67070863 MS.gene041300:CDS 25.0%
! ATTTATTAAGGGATGTAACT+TGG - chr7.2:67070573-67070592 MS.gene041300:intron 25.0%
! CACTAATATTAACATTTGGT+TGG + chr7.2:67070989-67071008 None:intergenic 25.0%
!! ATGCCAATTAAAAGCATAAA+TGG - chr7.2:67070098-67070117 MS.gene041300:intron 25.0%
!! TTTTGGTAAAGACCATAAAA+TGG + chr7.2:67070319-67070338 None:intergenic 25.0%
!!! TGTAAAAGCATTATATGTGT+AGG + chr7.2:67070034-67070053 None:intergenic 25.0%
AAATTGCTAAGAGATTTCCT+GGG - chr7.2:67070871-67070890 MS.gene041300:CDS 30.0%
ATATATTACAGCGTTTAACG+TGG + chr7.2:67070201-67070220 None:intergenic 30.0%
ATTTCATGAAGAAGTCGTTT+AGG - chr7.2:67071075-67071094 MS.gene041300:CDS 30.0%
CAAAGAACGAATATGTCAAA+TGG - chr7.2:67069692-67069711 MS.gene041300:CDS 30.0%
CTTCTTACTACATGAAATTG+TGG + chr7.2:67070624-67070643 None:intergenic 30.0%
GAACTTCAGAAATATGTAGT+TGG - chr7.2:67070834-67070853 MS.gene041300:CDS 30.0%
TATTGCTTTGATGTAGCTAT+AGG + chr7.2:67070061-67070080 None:intergenic 30.0%
TTCAGAGTGTGATTATGAAA+TGG - chr7.2:67071016-67071035 MS.gene041300:intron 30.0%
!!! ACTTTATTTTCATGCATGTG+TGG + chr7.2:67070148-67070167 None:intergenic 30.0%
!!! GTTTCTTCTTTTTTACTCCA+TGG + chr7.2:67070804-67070823 None:intergenic 30.0%
AAGATAGGCACCTTAATATC+TGG + chr7.2:67069982-67070001 None:intergenic 35.0%
AGAGTTCAGTTAAGAACCAT+TGG - chr7.2:67070901-67070920 MS.gene041300:intron 35.0%
ATTCCATTTCAAACCTCGAA+CGG + chr7.2:67070280-67070299 None:intergenic 35.0%
CAAGAACAACTCAATGAACA+CGG - chr7.2:67070950-67070969 MS.gene041300:intron 35.0%
CAAGAGTGAAAAACAATGCA+GGG - chr7.2:67069933-67069952 MS.gene041300:CDS 35.0%
CATATTGCTACCTTTCTAGA+TGG - chr7.2:67069910-67069929 MS.gene041300:CDS 35.0%
CTATCTTCGACCAGATATTA+AGG - chr7.2:67069969-67069988 MS.gene041300:intron 35.0%
GAAATTGCTAAGAGATTTCC+TGG - chr7.2:67070870-67070889 MS.gene041300:CDS 35.0%
GTACATGAATGGATGCAATT+TGG - chr7.2:67070698-67070717 MS.gene041300:intron 35.0%
! CATTATATTTTGTCCGTTCG+AGG - chr7.2:67070264-67070283 MS.gene041300:intron 35.0%
! GTTGCTTTGAGCTTAAAGAA+TGG - chr7.2:67069884-67069903 MS.gene041300:CDS 35.0%
!! ACATTGTTTTGTATGCTTGC+AGG - chr7.2:67070773-67070792 MS.gene041300:CDS 35.0%
!!! TGAAATGGAGTTTTTTCCTG+AGG - chr7.2:67071031-67071050 MS.gene041300:CDS 35.0%
AAAAACAATGCAGGGAGAGA+TGG - chr7.2:67069941-67069960 MS.gene041300:CDS 40.0%
CAAGCTTGTAATAAGAGGTC+GGG + chr7.2:67069657-67069676 None:intergenic 40.0%
GCAAGAGTGAAAAACAATGC+AGG - chr7.2:67069932-67069951 MS.gene041300:CDS 40.0%
GCAAGCTTGTAATAAGAGGT+CGG + chr7.2:67069658-67069677 None:intergenic 40.0%
GTAGTAAGAAGTCCAAGCTT+TGG - chr7.2:67070633-67070652 MS.gene041300:intron 40.0%
GTCTGCAAGCTTGTAATAAG+AGG + chr7.2:67069662-67069681 None:intergenic 40.0%
TTCACTCTTGCCATCTAGAA+AGG + chr7.2:67069923-67069942 None:intergenic 40.0%
! CGTGTTCATTGAGTTGTTCT+TGG + chr7.2:67070952-67070971 None:intergenic 40.0%
! TTGAGTTGTTCTTGGCATTC+CGG + chr7.2:67070944-67070963 None:intergenic 40.0%
!! AGCATTCTTCTGGAATCTGT+GGG - chr7.2:67069862-67069881 MS.gene041300:CDS 40.0%
!! TAGCATTCTTCTGGAATCTG+TGG - chr7.2:67069861-67069880 MS.gene041300:CDS 40.0%
CACATCTGCAAACCAAAGCT+TGG + chr7.2:67070648-67070667 None:intergenic 45.0%
CGAATATGTCAAATGGACCG+CGG - chr7.2:67069699-67069718 MS.gene041300:CDS 45.0%
GATATACCTATCCTCTTCCG+CGG + chr7.2:67069719-67069738 None:intergenic 45.0%
TATGCTTGCAGGATGAACCA+TGG - chr7.2:67070784-67070803 MS.gene041300:CDS 45.0%
TCCTGCTGCATAAAAACCTC+AGG + chr7.2:67071050-67071069 None:intergenic 45.0%
TGTCCGTTCGAGGTTTGAAA+TGG - chr7.2:67070274-67070293 MS.gene041300:intron 45.0%
! TCCTGAGGTTTTTATGCAGC+AGG - chr7.2:67071046-67071065 MS.gene041300:CDS 45.0%
CACGCTCAATGGCATTCCAA+TGG + chr7.2:67070920-67070939 None:intergenic 50.0%
GCATGTGTGGACTTGAACCA+TGG + chr7.2:67070135-67070154 None:intergenic 50.0%
AATGGACCGCGGAAGAGGAT+AGG - chr7.2:67069710-67069729 MS.gene041300:CDS 55.0%
ACTGAACTCTCAGTACGCCC+AGG + chr7.2:67070891-67070910 None:intergenic 55.0%
GGAATGCCATTGAGCGTGTC+CGG - chr7.2:67070922-67070941 MS.gene041300:intron 55.0%
TGTCAAATGGACCGCGGAAG+AGG - chr7.2:67069705-67069724 MS.gene041300:CDS 55.0%
GGCATTCCGGACACGCTCAA+TGG + chr7.2:67070931-67070950 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 67069649 67071106 67069649 ID=MS.gene041300
chr7.2 mRNA 67069649 67071106 67069649 ID=MS.gene041300.t1;Parent=MS.gene041300
chr7.2 exon 67071024 67071106 67071024 ID=MS.gene041300.t1.exon1;Parent=MS.gene041300.t1
chr7.2 CDS 67071024 67071106 67071024 ID=cds.MS.gene041300.t1;Parent=MS.gene041300.t1
chr7.2 exon 67070765 67070891 67070765 ID=MS.gene041300.t1.exon2;Parent=MS.gene041300.t1
chr7.2 CDS 67070765 67070891 67070765 ID=cds.MS.gene041300.t1;Parent=MS.gene041300.t1
chr7.2 exon 67069649 67069960 67069649 ID=MS.gene041300.t1.exon3;Parent=MS.gene041300.t1
chr7.2 CDS 67069649 67069960 67069649 ID=cds.MS.gene041300.t1;Parent=MS.gene041300.t1
Gene Sequence

>MS.gene041300

ATGTACCCGACCTCTTATTACAAGCTTGCAGACAACAATGAATCAAAGAACGAATATGTCAAATGGACCGCGGAAGAGGATAGGTATATCAAATCATTTAAAATTCGAACTCTCTCTACTACACAATGTTTTCATATTTTTGTATGGTTTTATTATATACACTATTGGTTCAAGTTGAAGATATGTTTAATTATTTTGTTTTTATAATTTTTTAGCATTCTTCTGGAATCTGTGGGTTGCTTTGAGCTTAAAGAATGGTCACATATTGCTACCTTTCTAGATGGCAAGAGTGAAAAACAATGCAGGGAGAGATGGTATAACTATCTTCGACCAGATATTAAGGTGCCTATCTTTTCAATTTTTTTAGTATTTATTTCTCACACCTACACATATAATGCTTTTACATGTACCTATAGCTACATCAAAGCAATAAAAAAAATTAGGGGTGCATGCCAATTAAAAGCATAAATGGAATTAAATCATCCATGGTTCAAGTCCACACATGCATGAAAATAAAGTGTTGCTAGCATTACTCTACATGTGAATGATCCACGTTAAACGCTGTAATATATGTAGATTATCTTATTTTCAGAGTAATTCTTGTTTGTTTTTTAACATTATATTTTGTCCGTTCGAGGTTTGAAATGGAATATCTATTTATAATTATCCATTTTATGGTCTTTACCAAAAATGAATTTTATTGAGTGGTAAGACACTTTTACTTCTTAAGTAAGTTATAAGAATATGTACCGATAACATGATAACAAAAAAAACTTATGGTTGAAACATAACTTGTATTATATGATACATATTTAAAATTTTATTAAAATCTACAAATTTGATATATTAAATTAATTTGAACTATTTATTTTTTGACAAATATTACTTTAAAAGTTGTATTAGCAAAATATTAAATTTACATAGATTTATTAAGGGATGTAACTTGGCAAGAGTATAATAAGTTGATCTTCACCACAATTTCATGTAGTAAGAAGTCCAAGCTTTGGTTTGCAGATGTGTTGTCTTGCTAGATAGATAATTTAAATATTGTACATGAATGGATGCAATTTGGTGAAATGAAAAATCATTCTCAATTTAATCATAATTATATATCTAATACACACACATTGTTTTGTATGCTTGCAGGATGAACCATGGAGTAAAAAAGAAGAAACTATACTACTTGAACTTCAGAAATATGTAGTTGGGAATAATTGGACTGAAATTGCTAAGAGATTTCCTGGGCGTACTGAGAGTTCAGTTAAGAACCATTGGAATGCCATTGAGCGTGTCCGGAATGCCAAGAACAACTCAATGAACACGGCTAATGTTGAAAACCAACCAAATGTTAATATTAGTGATGAAAGTTCAGAGTGTGATTATGAAATGGAGTTTTTTCCTGAGGTTTTTATGCAGCAGGAAATTGATTTCATGAAGAAGTCGTTTAGGAACCTTTAA
Protein sequence

>MS.gene041300.t1

MYPTSYYKLADNNESKNEYVKWTAEEDSILLESVGCFELKEWSHIATFLDGKSEKQCRERWYNYLRPDIKDEPWSKKEETILLELQKYVVGNNWTEIAKRFPGRTESSVKNHWNAIERVRNAKNNSMNTANVENQPNVNISDESSECDYEMEFFPEVFMQQEIDFMKKSFRNL